TOP2A (DNA topoisomerase II alpha) - Rat Genome Database

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Gene: TOP2A (DNA topoisomerase II alpha) Homo sapiens
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Symbol: TOP2A
Name: DNA topoisomerase II alpha
RGD ID: 1352729
HGNC Page HGNC:11989
Description: Enables several functions, including magnesium ion binding activity; protein dimerization activity; and protein kinase C binding activity. Involved in several processes, including chromosome organization; negative regulation of DNA duplex unwinding; and positive regulation of single stranded viral RNA replication via double stranded DNA intermediate. Located in centriole; cytoplasm; and nuclear lumen. Part of DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex and ribonucleoprotein complex. Biomarker of cervix uteri carcinoma in situ; ductal carcinoma in situ; penile benign neoplasm; prostate cancer; and urinary system cancer (multiple).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: DNA gyrase; DNA topoisomerase (ATP-hydrolyzing); DNA topoisomerase 2-alpha; DNA topoisomerase II, 170 kD; DNA topoisomerase II, alpha isozyme; TOP2; TOP2alpha; TOPIIA; topoisomerase (DNA) II alpha; topoisomerase (DNA) II alpha 170kDa; TP2A
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381740,388,525 - 40,417,896 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1740,388,525 - 40,417,896 (-)EnsemblGRCh38hg38GRCh38
GRCh371738,544,777 - 38,574,148 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361735,798,321 - 35,827,695 (-)NCBINCBI36Build 36hg18NCBI36
Build 341735,798,320 - 35,827,695NCBI
Celera1735,204,916 - 35,234,352 (-)NCBICelera
Cytogenetic Map17q21.2NCBI
HuRef1734,337,633 - 34,367,123 (-)NCBIHuRef
CHM1_11738,780,085 - 38,809,522 (-)NCBICHM1_1
T2T-CHM13v2.01741,252,019 - 41,281,395 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (EXP)
(+)-dexrazoxane  (EXP)
(+)-epicatechin-3-O-gallate  (EXP)
(-)-demecolcine  (EXP)
(-)-epigallocatechin 3-gallate  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
1,2-naphthoquinone  (EXP)
1,4-benzoquinone  (EXP,ISO)
1,4-dithiothreitol  (EXP)
1,4-naphthoquinone  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-diaminotoluene  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2-acetamidofluorene  (ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
2-methylcholine  (EXP)
2-nitrofluorene  (ISO)
2-palmitoylglycerol  (EXP)
3-chloropropane-1,2-diol  (ISO)
3-methylcholanthrene  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4'-epidoxorubicin  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-hydroxynon-2-enal  (EXP,ISO)
4-hydroxyphenyl retinamide  (ISO)
5-aza-2'-deoxycytidine  (EXP)
5-azacytidine  (EXP)
5-fluorouracil  (EXP,ISO)
6-propyl-2-thiouracil  (ISO)
9,10-phenanthroquinone  (EXP)
9-hydroxyellipticine  (EXP)
acetamide  (ISO)
acetamiprid  (ISO)
acrylamide  (EXP,ISO)
aflatoxin B1  (EXP,ISO)
alachlor  (ISO)
aldehydo-D-glucosamine  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (EXP)
altenusin  (EXP)
alternariol  (EXP)
Altertoxin I  (EXP)
Altertoxin II  (EXP)
amsacrine  (EXP)
anthracenes  (EXP)
antimycin A  (EXP)
arachidonic acid  (EXP)
aristolochic acid A  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
arsenite(3-)  (EXP)
arsenous acid  (EXP)
ATP  (EXP)
atrazine  (ISO)
aurofusarin  (EXP)
azathioprine  (EXP)
barium sulfate  (ISO)
benzene  (EXP)
benzene-1,2,4-triol  (EXP)
benzimidazoles  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (EXP)
benzo[b]fluoranthene  (ISO)
berberine  (EXP)
beta-D-glucosamine  (ISO)
beta-lapachone  (EXP)
beta-naphthoflavone  (EXP,ISO)
betulinic acid  (EXP)
bis(2-chloroethyl) sulfide  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
Boswellic acid  (EXP)
buta-1,3-diene  (ISO)
butanal  (EXP)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
caffeine  (EXP)
calcitriol  (EXP)
cannabidiol  (EXP)
captafol  (ISO)
captan  (ISO)
Carbadox  (ISO)
carbon nanotube  (ISO)
carboplatin  (EXP)
cefaloridine  (ISO)
CGP 52608  (EXP)
chlorendic acid  (ISO)
chloroacetaldehyde  (EXP)
chloroethene  (EXP)
chlorpyrifos  (EXP)
ciprofloxacin  (EXP)
cisplatin  (EXP,ISO)
clofibrate  (ISO)
cobalt dichloride  (EXP,ISO)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
copper(II) sulfate  (EXP)
corosolic acid  (EXP)
corticosterone  (ISO)
coumarin  (EXP)
coumestrol  (EXP)
Cryptotanshinone  (EXP)
CU-O LINKAGE  (EXP)
Cuprizon  (ISO)
curcumin  (EXP)
cyclophosphamide  (EXP,ISO)
cyclosporin A  (EXP,ISO)
D-glucose  (ISO)
DDE  (EXP)
deguelin  (EXP)
delphinidin  (EXP)
dexamethasone  (EXP,ISO)
diallyl trisulfide  (EXP)
diarsenic trioxide  (EXP)
dibenzofuran  (ISO)
dibutyl phthalate  (EXP,ISO)
dichlorine  (ISO)
dichloroacetic acid  (ISO)
dicrotophos  (EXP)
diethylstilbestrol  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (ISO)
diquat  (ISO)
disodium selenite  (EXP)
dorsomorphin  (EXP)
doxorubicin  (EXP,ISO)
dronedarone  (EXP)
emodin  (EXP)
Enterolactone  (EXP)
ethylbenzene  (EXP)
etoposide  (EXP,ISO)
fenofibrate  (ISO)
fenpyroximate  (EXP)
flavonoids  (EXP)
folic acid  (EXP)
FR900359  (EXP)
fructose  (ISO)
fulvestrant  (EXP)
furan  (ISO)
genistein  (EXP,ISO)
glucose  (ISO)
glutathione  (EXP)
glycidol  (ISO)
glyphosate  (ISO)
Heliotrine  (ISO)
hexadecanoic acid  (EXP)
hydrogen peroxide  (EXP)
hydroquinone  (EXP,ISO)
hypericin  (EXP)
ifosfamide  (EXP)
indirubin  (EXP)
indole-3-methanol  (ISO)
irinotecan  (EXP)
isoflavones  (EXP)
ivermectin  (EXP)
L-1,4-dithiothreitol  (EXP)
lapatinib  (EXP)
Lasiocarpine  (EXP)
lead diacetate  (ISO)
leflunomide  (EXP,ISO)
lipopolysaccharide  (EXP,ISO)
lithium atom  (ISO)
lithium hydride  (ISO)
lovastatin  (ISO)
lucanthone  (EXP)
Macrosporin  (EXP)
MeIQx  (EXP)
menadione  (EXP)
methamphetamine  (EXP,ISO)
methapyrilene  (ISO)
methotrexate  (EXP)
methylmercury chloride  (ISO)
methylparaben  (EXP)
methylseleninic acid  (EXP)
mycotoxin  (EXP)
myricetin  (EXP)
N(4)-hydroxycytidine  (ISO)
N-acetyl-1,4-benzoquinone imine  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-butyl-N-(4-hydroxybutyl)nitrosamine  (ISO)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-methyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
N-Nitrosopyrrolidine  (EXP)
naphthalene-1,2-diol  (EXP)
nevadensin  (EXP)
nickel subsulfide  (ISO)
niclosamide  (EXP)
Nitidine  (EXP)
O-methyleugenol  (ISO)
ochratoxin A  (ISO)
okadaic acid  (ISO)
oleanolic acid  (EXP)
orotic acid  (ISO)
oxaliplatin  (ISO)
oxfendazole  (ISO)
ozone  (ISO)
p-menthan-3-ol  (EXP)
paclitaxel  (EXP)
palbociclib  (EXP)
paracetamol  (EXP,ISO)
paraquat  (EXP)
PCB138  (ISO)
pectolinarigenin  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
phenformin  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (EXP)
PhIP  (EXP,ISO)
phorbol 13-acetate 12-myristate  (ISO)
phytoestrogen  (EXP)
picoxystrobin  (EXP)
piperonyl butoxide  (ISO)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
procyanidin B2  (EXP)
progesterone  (EXP,ISO)
promethazine  (ISO)
propanal  (EXP)
propiconazole  (ISO)
Pyrenophorol  (EXP)
quercetin  (EXP,ISO)
raloxifene  (EXP)
razoxane  (EXP)
Rebamipide  (ISO)
resveratrol  (EXP,ISO)
riddelliine  (EXP)
rotenone  (EXP,ISO)
sarin  (EXP)
SB 431542  (EXP)
senecionine  (ISO)
Senkirkine  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (EXP)
sodium dichromate  (ISO)
Stemphyltoxin III  (EXP)
succimer  (EXP)
sunitinib  (EXP)
T-2 toxin  (EXP)
tamibarotene  (EXP)
tamoxifen  (EXP,ISO)
teniposide  (EXP)
testosterone  (EXP,ISO)
tetrachloromethane  (ISO)
tetracycline  (EXP,ISO)
thalidomide  (EXP)
thapsigargin  (ISO)
thifluzamide  (EXP)
thimerosal  (EXP)
thioacetamide  (ISO)
thiram  (EXP)
thymoquinone  (EXP)
titanium dioxide  (EXP,ISO)
topotecan  (EXP,ISO)
tremolite asbestos  (ISO)
triacsin C  (EXP)
triclosan  (EXP)
trimellitic anhydride  (ISO)
triphenyl phosphate  (EXP)
triptonide  (ISO)
troglitazone  (EXP)
trovafloxacin  (EXP,ISO)
tungsten  (ISO)
ursolic acid  (EXP)
valproic acid  (EXP,ISO)
vincaleukoblastine  (EXP)
vincristine  (EXP)
Xanthatin  (EXP)
zaragozic acid A  (ISO)
zinc atom  (EXP)
zinc(0)  (EXP)
zoledronic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Topoisomerase II alpha status in renal medullary carcinoma: immuno-expression and gene copy alterations of a potential target of therapy. Albadine R, etal., J Urol. 2009 Aug;182(2):735-40. Epub 2009 Jun 18.
2. DNA topoisomerase I and IIalpha expression in penile carcinomas: assessing potential tumour chemosensitivity. Berney DM, etal., BJU Int. 2008 Sep;102(8):1040-4. Epub 2008 May 16.
3. Prognostic markers of low-grade squamous intraepithelial lesions: the role of topoisomerase IIalpha and active caspase-3. Coelho RA, etal., Eur J Gynaecol Oncol. 2008;29(5):499-501.
4. Topoisomerase IIalpha mRNA and protein expression in ovarian carcinoma: correlation with clinicopathological factors and prognosis. Faggad A, etal., Mod Pathol. 2009 Apr;22(4):579-88. Epub 2009 Mar 6.
5. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
6. Clinical Implications and Prognostic Values of Topoisomerase-II Alpha Expression in Primary Non-Muscle-Invasive Bladder Cancer. Kim EJ, etal., Urology. 2009 Nov 12.
7. Identification of prognostic biomarkers for prostate cancer. Kosari F, etal., Clin Cancer Res. 2008 Mar 15;14(6):1734-43.
8. Gene expression profiling in cervical cancer: identification of novel markers for disease diagnosis and therapy. Martin CM, etal., Methods Mol Biol. 2009;511:333-59.
9. The value of TOP2A gene copy number variation as a biomarker in breast cancer: Update of DBCG trial 89D. Nielsen KV, etal., Acta Oncol. 2008;47(4):725-34.
10. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
11. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
13. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
14. Anthracyclines/trastuzumab: new aspects of cardiotoxicity and molecular mechanisms. Rochette L, etal., Trends Pharmacol Sci. 2015 Jun;36(6):326-48. doi: 10.1016/j.tips.2015.03.005. Epub 2015 Apr 17.
15. Topoisomerase IIalpha expression in ductal carcinoma in situ of the breast: a preliminary study. Shpitz B, etal., Hum Pathol. 2000 Oct;31(10):1249-54.
16. Relationship between Topoisomerase 2A RNA Expression and Recurrence after Adjuvant Chemotherapy for Breast Cancer. Sparano JA, etal., Clin Cancer Res. 2009 Dec 15;15(24):7693-7700. Epub .
17. Gene expression profiling of favorable histology Wilms tumors and its correlation with clinical features. Takahashi M, etal., Cancer Res. 2002 Nov 15;62(22):6598-605.
18. Topoisomerase IIalpha in Wilms' tumour: gene alterations and immunoexpression. Tretiakova M, etal., J Clin Pathol. 2006 Dec;59(12):1272-7. Epub 2006 Mar 23.
19. Topoisomerase II alpha gene copy loss has adverse prognostic significance in ERBB2-amplified breast cancer: a retrospective study of paraffin-embedded tumor specimens and medical charts. Usha L, etal., J Hematol Oncol. 2008 Aug 14;1:12.
20. Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients. Xiong Y, etal., Emerg Microbes Infect. 2020 Dec;9(1):761-770. doi: 10.1080/22221751.2020.1747363.
Additional References at PubMed
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PMID:25304659   PMID:25372714   PMID:25432700   PMID:25451918   PMID:25521189   PMID:25550836   PMID:25586498   PMID:25605014   PMID:25609649   PMID:25657202   PMID:25693804   PMID:25695068  
PMID:25737280   PMID:25762097   PMID:25769404   PMID:25777966   PMID:25846551   PMID:25846735   PMID:25921160   PMID:25931012   PMID:25963833   PMID:26022247   PMID:26030138   PMID:26046674  
PMID:26081617   PMID:26100858   PMID:26186194   PMID:26221582   PMID:26252353   PMID:26344197   PMID:26496610   PMID:26560244   PMID:26588239   PMID:26612825   PMID:26617887   PMID:26618866  
PMID:26638075   PMID:26643143   PMID:26657567   PMID:26678539   PMID:26867764   PMID:26947016   PMID:26994023   PMID:27088089   PMID:27175798   PMID:27248496   PMID:27259241   PMID:27284123  
PMID:27407105   PMID:27453043   PMID:27473264   PMID:27517472   PMID:27558965   PMID:27634302   PMID:27684187   PMID:27750031   PMID:27754753   PMID:27814490   PMID:27926873   PMID:27974648  
PMID:28052682   PMID:28069330   PMID:28075472   PMID:28077445   PMID:28079792   PMID:28087392   PMID:28093271   PMID:28192407   PMID:28214203   PMID:28231233   PMID:28301542   PMID:28302793  
PMID:28385713   PMID:28393224   PMID:28432084   PMID:28472494   PMID:28514442   PMID:28515276   PMID:28524877   PMID:28611047   PMID:28611105   PMID:28638271   PMID:28692049   PMID:28700616  
PMID:28718761   PMID:28755093   PMID:28800016   PMID:28813519   PMID:28815403   PMID:28899973   PMID:28927264   PMID:28977666   PMID:29045811   PMID:29128334   PMID:29152775   PMID:29180619  
PMID:29298432   PMID:29330624   PMID:29334118   PMID:29385443   PMID:29429988   PMID:29438989   PMID:29467281   PMID:29467282   PMID:29478914   PMID:29490077   PMID:29507755   PMID:29514855  
PMID:29587760   PMID:29721183   PMID:29761838   PMID:29795372   PMID:29802200   PMID:29911972   PMID:29915179   PMID:29955894   PMID:29991511   PMID:30011940   PMID:30021884   PMID:30074233  
PMID:30082834   PMID:30110629   PMID:30132517   PMID:30169847   PMID:30196744   PMID:30463901   PMID:30520434   PMID:30544723   PMID:30554943   PMID:30581152   PMID:30583686   PMID:30585729  
PMID:30590722   PMID:30672125   PMID:30760286   PMID:30804502   PMID:30816525   PMID:30833792   PMID:30884312   PMID:30948266   PMID:31048545   PMID:31072339   PMID:31076518   PMID:31091453  
PMID:31106979   PMID:31180040   PMID:31180492   PMID:31202576   PMID:31202577   PMID:31216997   PMID:31219614   PMID:31239290   PMID:31248990   PMID:31343991   PMID:31409639   PMID:31505165  
PMID:31586073   PMID:31662984   PMID:31675149   PMID:31728578   PMID:31753913   PMID:31769059   PMID:31836624   PMID:31839203   PMID:31848259   PMID:31967940   PMID:31995728   PMID:32022739  
PMID:32041737   PMID:32048869   PMID:32051553   PMID:32068487   PMID:32103339   PMID:32193368   PMID:32218491   PMID:32323809   PMID:32400307   PMID:32416067   PMID:32433965   PMID:32460013  
PMID:32501506   PMID:32521226   PMID:32529326   PMID:32535049   PMID:32538781   PMID:32685486   PMID:32687490   PMID:32707033   PMID:32711345   PMID:32744500   PMID:32780321   PMID:32780723  
PMID:32786267   PMID:32807901   PMID:32866497   PMID:32877691   PMID:32925281   PMID:32951576   PMID:33023625   PMID:33144457   PMID:33188014   PMID:33226137   PMID:33296677   PMID:33301849  
PMID:33355372   PMID:33361736   PMID:33413211   PMID:33462405   PMID:33536335   PMID:33644029   PMID:33658012   PMID:33826602   PMID:33852840   PMID:33853758   PMID:33916271   PMID:33961781  
PMID:33982765   PMID:34016969   PMID:34079125   PMID:34091597   PMID:34189442   PMID:34244565   PMID:34284141   PMID:34316707   PMID:34349018   PMID:34373451   PMID:34588717   PMID:34591612  
PMID:34662580   PMID:34705880   PMID:34709727   PMID:34787052   PMID:34795231   PMID:34901782   PMID:34939898   PMID:35012441   PMID:35013556   PMID:35058360   PMID:35102251   PMID:35182466  
PMID:35241646   PMID:35247890   PMID:35253629   PMID:35256949   PMID:35271311   PMID:35297009   PMID:35384245   PMID:35439318   PMID:35532155   PMID:35575683   PMID:35705031   PMID:35778520  
PMID:35803934   PMID:35831314   PMID:35850772   PMID:35915203   PMID:35944360   PMID:35948041   PMID:36057605   PMID:36065190   PMID:36089195   PMID:36114006   PMID:36138481   PMID:36180891  
PMID:36215168   PMID:36243803   PMID:36271492   PMID:36339263   PMID:36373674   PMID:36424410   PMID:36517590   PMID:36526897   PMID:36537216   PMID:36550695   PMID:36574265   PMID:36585615  
PMID:36597993   PMID:36634849   PMID:36656469   PMID:36680145   PMID:36779763   PMID:36835656   PMID:36880596   PMID:36912080   PMID:37047518   PMID:37071682   PMID:37072811   PMID:37105989  
PMID:37114547   PMID:37172528   PMID:37184661   PMID:37249035   PMID:37314180   PMID:37314216   PMID:37338006   PMID:37433992   PMID:37616343   PMID:37638884   PMID:37689310   PMID:37781045  
PMID:37827155   PMID:37861550   PMID:37866880   PMID:37985446   PMID:38008711   PMID:38097570   PMID:38113892   PMID:38172120   PMID:38205938   PMID:38280479   PMID:38287116   PMID:38297188  
PMID:38334954   PMID:38403725   PMID:38445610   PMID:38561479   PMID:38806610   PMID:39147351  


Genomics

Comparative Map Data
TOP2A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381740,388,525 - 40,417,896 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1740,388,525 - 40,417,896 (-)EnsemblGRCh38hg38GRCh38
GRCh371738,544,777 - 38,574,148 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361735,798,321 - 35,827,695 (-)NCBINCBI36Build 36hg18NCBI36
Build 341735,798,320 - 35,827,695NCBI
Celera1735,204,916 - 35,234,352 (-)NCBICelera
Cytogenetic Map17q21.2NCBI
HuRef1734,337,633 - 34,367,123 (-)NCBIHuRef
CHM1_11738,780,085 - 38,809,522 (-)NCBICHM1_1
T2T-CHM13v2.01741,252,019 - 41,281,395 (-)NCBIT2T-CHM13v2.0
Top2a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391198,883,773 - 98,915,037 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1198,883,769 - 98,915,015 (-)EnsemblGRCm39 Ensembl
GRCm381198,992,947 - 99,024,199 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1198,992,943 - 99,024,189 (-)EnsemblGRCm38mm10GRCm38
MGSCv371198,854,261 - 98,885,503 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361198,809,493 - 98,840,205 (-)NCBIMGSCv36mm8
Celera11108,658,802 - 108,690,006 (-)NCBICelera
Cytogenetic Map11DNCBI
cM Map1162.91NCBI
Top2a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81084,441,954 - 84,473,093 (-)NCBIGRCr8
mRatBN7.21083,945,731 - 83,976,874 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1083,945,735 - 83,976,874 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1088,889,659 - 88,920,792 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01088,387,764 - 88,418,905 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01083,780,312 - 83,811,315 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01086,901,467 - 86,930,947 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1086,901,007 - 86,932,154 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01086,699,277 - 86,728,310 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41087,771,337 - 87,800,960 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11087,785,706 - 87,815,332 (-)NCBI
Celera1082,687,594 - 82,716,976 (-)NCBICelera
Cytogenetic Map10q31NCBI
Top2a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545114,929,136 - 14,964,723 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545114,928,273 - 14,964,855 (-)NCBIChiLan1.0ChiLan1.0
TOP2A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21924,537,882 - 24,567,338 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11726,432,885 - 26,462,340 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01716,872,169 - 16,901,605 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11717,097,619 - 17,127,195 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1717,097,778 - 17,126,207 (+)Ensemblpanpan1.1panPan2
TOP2A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1922,207,501 - 22,237,497 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl922,207,638 - 22,237,496 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha921,679,941 - 21,709,943 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0923,000,244 - 23,030,254 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl923,000,269 - 23,029,980 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1921,774,298 - 21,804,337 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0922,033,150 - 22,063,078 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0922,157,897 - 22,187,909 (+)NCBIUU_Cfam_GSD_1.0
Top2a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560221,608,163 - 21,633,139 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649015,441,575 - 15,466,978 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649015,441,463 - 15,465,692 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TOP2A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1222,001,282 - 22,028,450 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11222,001,300 - 22,028,452 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21222,310,214 - 22,337,485 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TOP2A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11665,761,391 - 65,792,041 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1665,761,416 - 65,792,701 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607736,662,555 - 36,693,082 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in TOP2A
76 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 17q21.33-24.2(chr17:36449220-68170214)x3 copy number gain See cases [RCV000050957] Chr17:36449220..68170214 [GRCh38]
Chr17:48563237..65936105 [GRCh37]
Chr17:45918236..63677950 [NCBI36]
Chr17:17q21.33-24.2
pathogenic
NM_001067.4(TOP2A):c.1460G>A (p.Arg487Lys) single nucleotide variant Dna topoisomerase II, resistance to inhibition of, by amsacrine [RCV000018260] Chr17:40408007 [GRCh38]
Chr17:38564259 [GRCh37]
Chr17:17q21.2
pathogenic|protective
GRCh38/hg38 17q23.2-25.3(chr17:36449220-83086677)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|See cases [RCV000052483] Chr17:36449220..83086677 [GRCh38]
Chr17:58617905..81044553 [GRCh37]
Chr17:55972687..78637842 [NCBI36]
Chr17:17q23.2-25.3
pathogenic
GRCh38/hg38 17q12-21.31(chr17:39199873-45629579)x3 copy number gain See cases [RCV000052479] Chr17:39199873..45629579 [GRCh38]
Chr17:37356126..43706945 [GRCh37]
Chr17:34609652..41062728 [NCBI36]
Chr17:17q12-21.31
pathogenic
GRCh38/hg38 17q23.1-25.1(chr17:36449220-75053130)x3 copy number gain See cases [RCV000137437] Chr17:36449220..75053130 [GRCh38]
Chr17:57595736..73049225 [GRCh37]
Chr17:54950518..70560820 [NCBI36]
Chr17:17q23.1-25.1
pathogenic
NM_001067.4(TOP2A):c.263T>C (p.Ile88Thr) single nucleotide variant Long QT syndrome [RCV000190129] Chr17:40416427 [GRCh38]
Chr17:38572679 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.3581C>G (p.Pro1194Arg) single nucleotide variant not specified [RCV000239186] Chr17:40396422 [GRCh38]
Chr17:38552674 [GRCh37]
Chr17:17q21.2
uncertain significance
GRCh37/hg19 17q21.2(chr17:38543535-38785943)x3 copy number gain See cases [RCV000511578] Chr17:38543535..38785943 [GRCh37]
Chr17:17q21.2
likely benign
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938) copy number gain See cases [RCV000511439] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
NM_001067.4(TOP2A):c.870T>G (p.His290Gln) single nucleotide variant not specified [RCV004313443] Chr17:40411738 [GRCh38]
Chr17:38567990 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3470C>T (p.Thr1157Ile) single nucleotide variant not specified [RCV004292935] Chr17:40398625 [GRCh38]
Chr17:38554877 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2329G>T (p.Gly777Cys) single nucleotide variant not specified [RCV004328392] Chr17:40403009 [GRCh38]
Chr17:38559261 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4264A>C (p.Lys1422Gln) single nucleotide variant not specified [RCV004285967] Chr17:40391509 [GRCh38]
Chr17:38547761 [GRCh37]
Chr17:17q21.2
uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3 copy number gain See cases [RCV000512441] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
NM_001067.4(TOP2A):c.1737+5G>A single nucleotide variant TOP2A-related disorder [RCV003965469]|not provided [RCV000714765] Chr17:40406827 [GRCh38]
Chr17:38563079 [GRCh37]
Chr17:17q21.2
likely benign|conflicting interpretations of pathogenicity|uncertain significance
NM_001067.4(TOP2A):c.3050A>T (p.Asp1017Val) single nucleotide variant not provided [RCV000714766] Chr17:40400018 [GRCh38]
Chr17:38556270 [GRCh37]
Chr17:17q21.2
uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3 copy number gain not provided [RCV000739324] Chr17:8547..81060040 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3 copy number gain not provided [RCV000739320] Chr17:7214..81058310 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3 copy number gain not provided [RCV000739325] Chr17:12344..81057996 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
NM_001067.4(TOP2A):c.2321A>T (p.Asn774Ile) single nucleotide variant TOP2A-related disorder [RCV003960818]|not provided [RCV000969922] Chr17:40403017 [GRCh38]
Chr17:38559269 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.4029T>G (p.Thr1343=) single nucleotide variant not provided [RCV000947818] Chr17:40392277 [GRCh38]
Chr17:38548529 [GRCh37]
Chr17:17q21.2
benign
NM_001067.4(TOP2A):c.2928A>G (p.Lys976=) single nucleotide variant not provided [RCV000947819] Chr17:40400281 [GRCh38]
Chr17:38556533 [GRCh37]
Chr17:17q21.2
benign
GRCh37/hg19 17p11.2-q21.2(chr17:21690653-38772647)x3 copy number gain not provided [RCV000846852] Chr17:21690653..38772647 [GRCh37]
Chr17:17p11.2-q21.2
pathogenic
NM_001067.4(TOP2A):c.1929T>G (p.Pro643=) single nucleotide variant not provided [RCV000900730] Chr17:40406408 [GRCh38]
Chr17:38562660 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.3276A>G (p.Glu1092=) single nucleotide variant not provided [RCV000977341] Chr17:40399052 [GRCh38]
Chr17:38555304 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.1713G>A (p.Glu571=) single nucleotide variant TOP2A-related disorder [RCV003916183]|not provided [RCV000965379] Chr17:40406856 [GRCh38]
Chr17:38563108 [GRCh37]
Chr17:17q21.2
benign|likely benign
NM_001067.4(TOP2A):c.1078A>G (p.Met360Val) single nucleotide variant not specified [RCV004299849] Chr17:40411234 [GRCh38]
Chr17:38567486 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3590G>A (p.Gly1197Glu) single nucleotide variant not provided [RCV000955523] Chr17:40396413 [GRCh38]
Chr17:38552665 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.1170A>G (p.Ser390=) single nucleotide variant not provided [RCV000954307] Chr17:40411142 [GRCh38]
Chr17:38567394 [GRCh37]
Chr17:17q21.2
benign|likely benign
NM_001067.4(TOP2A):c.3290T>C (p.Val1097Ala) single nucleotide variant TOP2A-related disorder [RCV003903196]|not provided [RCV000949600] Chr17:40398936 [GRCh38]
Chr17:38555188 [GRCh37]
Chr17:17q21.2
benign|likely benign
NM_001067.4(TOP2A):c.3590G>C (p.Gly1197Ala) single nucleotide variant TOP2A-related disorder [RCV003940559]|not provided [RCV000886718] Chr17:40396413 [GRCh38]
Chr17:38552665 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.909G>A (p.Met303Ile) single nucleotide variant not provided [RCV000887506] Chr17:40411699 [GRCh38]
Chr17:38567951 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.4088+8T>C single nucleotide variant not provided [RCV000888308] Chr17:40392210 [GRCh38]
Chr17:38548462 [GRCh37]
Chr17:17q21.2
benign
NM_001067.4(TOP2A):c.3480A>C (p.Arg1160Ser) single nucleotide variant TOP2A-related disorder [RCV003922912]|not provided [RCV000898270] Chr17:40398615 [GRCh38]
Chr17:38554867 [GRCh37]
Chr17:17q21.2
benign|likely benign
NM_001067.4(TOP2A):c.729A>G (p.Ala243=) single nucleotide variant not provided [RCV000887089] Chr17:40412819 [GRCh38]
Chr17:38569071 [GRCh37]
Chr17:17q21.2
benign
NM_001067.4(TOP2A):c.2781C>T (p.Pro927=) single nucleotide variant not provided [RCV000891164] Chr17:40400547 [GRCh38]
Chr17:38556799 [GRCh37]
Chr17:17q21.2
benign
NM_001067.4(TOP2A):c.2678A>G (p.Lys893Arg) single nucleotide variant TOP2A-related disorder [RCV003957933]|not provided [RCV000890315] Chr17:40400650 [GRCh38]
Chr17:38556902 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.2662A>G (p.Met888Val) single nucleotide variant not provided [RCV001357742] Chr17:40400852 [GRCh38]
Chr17:38557104 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3494A>G (p.Asp1165Gly) single nucleotide variant not specified [RCV004235633] Chr17:40398601 [GRCh38]
Chr17:38554853 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4106T>C (p.Leu1369Pro) single nucleotide variant not specified [RCV004135637] Chr17:40392094 [GRCh38]
Chr17:38548346 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3598G>T (p.Ala1200Ser) single nucleotide variant not specified [RCV004186050] Chr17:40396405 [GRCh38]
Chr17:38552657 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2782G>A (p.Val928Ile) single nucleotide variant not specified [RCV004088853] Chr17:40400546 [GRCh38]
Chr17:38556798 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.3328A>G (p.Lys1110Glu) single nucleotide variant not specified [RCV004234139] Chr17:40398898 [GRCh38]
Chr17:38555150 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.494A>G (p.Tyr165Cys) single nucleotide variant not specified [RCV004134421] Chr17:40413277 [GRCh38]
Chr17:38569529 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4303A>G (p.Arg1435Gly) single nucleotide variant not specified [RCV004133955] Chr17:40390129 [GRCh38]
Chr17:38546381 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.182T>C (p.Met61Thr) single nucleotide variant not specified [RCV004186548] Chr17:40416508 [GRCh38]
Chr17:38572760 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4462A>G (p.Ser1488Gly) single nucleotide variant not specified [RCV004145951] Chr17:40389970 [GRCh38]
Chr17:38546222 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3625G>A (p.Glu1209Lys) single nucleotide variant not specified [RCV004098315] Chr17:40396378 [GRCh38]
Chr17:38552630 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4010C>T (p.Ser1337Leu) single nucleotide variant not specified [RCV004225243] Chr17:40392296 [GRCh38]
Chr17:38548548 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2780C>T (p.Pro927Leu) single nucleotide variant not specified [RCV004143050] Chr17:40400548 [GRCh38]
Chr17:38556800 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3392T>C (p.Met1131Thr) single nucleotide variant not specified [RCV004123137] Chr17:40398834 [GRCh38]
Chr17:38555086 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.1345G>A (p.Gly449Ser) single nucleotide variant not specified [RCV004150122] Chr17:40408122 [GRCh38]
Chr17:38564374 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.1805C>A (p.Thr602Asn) single nucleotide variant not specified [RCV004165629] Chr17:40406622 [GRCh38]
Chr17:38562874 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.370G>T (p.Gly124Cys) single nucleotide variant not specified [RCV004167069] Chr17:40413588 [GRCh38]
Chr17:38569840 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2908G>T (p.Val970Leu) single nucleotide variant not specified [RCV004080173] Chr17:40400301 [GRCh38]
Chr17:38556553 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4533A>C (p.Lys1511Asn) single nucleotide variant not specified [RCV004112423] Chr17:40389582 [GRCh38]
Chr17:38545834 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3689A>G (p.Glu1230Gly) single nucleotide variant not specified [RCV004132709] Chr17:40396314 [GRCh38]
Chr17:38552566 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4291G>T (p.Gly1431Cys) single nucleotide variant not specified [RCV004289790] Chr17:40390141 [GRCh38]
Chr17:38546393 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2347C>T (p.Leu783Phe) single nucleotide variant not specified [RCV004254949] Chr17:40402991 [GRCh38]
Chr17:38559243 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2741C>T (p.Ala914Val) single nucleotide variant not specified [RCV004266448] Chr17:40400587 [GRCh38]
Chr17:38556839 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3592G>A (p.Gly1198Arg) single nucleotide variant not specified [RCV004268396] Chr17:40396411 [GRCh38]
Chr17:38552663 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2051A>G (p.Tyr684Cys) single nucleotide variant not specified [RCV004360138] Chr17:40404487 [GRCh38]
Chr17:38560739 [GRCh37]
Chr17:17q21.2
uncertain significance
GRCh37/hg19 17q21.1-21.2(chr17:38390996-38689619)x3 copy number gain not provided [RCV003485157] Chr17:38390996..38689619 [GRCh37]
Chr17:17q21.1-21.2
uncertain significance
NM_001067.4(TOP2A):c.3589G>C (p.Gly1197Arg) single nucleotide variant not provided [RCV003428261] Chr17:40396414 [GRCh38]
Chr17:38552666 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.690C>G (p.Ser230Arg) single nucleotide variant not provided [RCV003413221] Chr17:40412858 [GRCh38]
Chr17:38569110 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.4212A>G (p.Glu1404=) single nucleotide variant not provided [RCV003419726] Chr17:40391561 [GRCh38]
Chr17:38547813 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.3372C>T (p.Thr1124=) single nucleotide variant TOP2A-related disorder [RCV003969166] Chr17:40398854 [GRCh38]
Chr17:38555106 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.4410T>G (p.Thr1470=) single nucleotide variant TOP2A-related disorder [RCV003979537] Chr17:40390022 [GRCh38]
Chr17:38546274 [GRCh37]
Chr17:17q21.2
benign
NM_001067.4(TOP2A):c.366A>G (p.Gly122=) single nucleotide variant TOP2A-related disorder [RCV003964143] Chr17:40413592 [GRCh38]
Chr17:38569844 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.4008C>A (p.Phe1336Leu) single nucleotide variant not specified [RCV004468055] Chr17:40392298 [GRCh38]
Chr17:38548550 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2860A>C (p.Ile954Leu) single nucleotide variant not specified [RCV004468046] Chr17:40400349 [GRCh38]
Chr17:38556601 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4126G>A (p.Val1376Met) single nucleotide variant not specified [RCV004468056] Chr17:40392074 [GRCh38]
Chr17:38548326 [GRCh37]
Chr17:17q21.2
likely benign
NM_001067.4(TOP2A):c.1292A>G (p.Lys431Arg) single nucleotide variant not specified [RCV004468043] Chr17:40408542 [GRCh38]
Chr17:38564794 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2378G>A (p.Arg793Lys) single nucleotide variant not specified [RCV004468045] Chr17:40402960 [GRCh38]
Chr17:38559212 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3913G>A (p.Glu1305Lys) single nucleotide variant not specified [RCV004468051] Chr17:40392636 [GRCh38]
Chr17:38548888 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4291G>A (p.Gly1431Ser) single nucleotide variant not specified [RCV004468057] Chr17:40390141 [GRCh38]
Chr17:38546393 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3691G>T (p.Ala1231Ser) single nucleotide variant not specified [RCV004468049] Chr17:40396312 [GRCh38]
Chr17:38552564 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2863A>G (p.Thr955Ala) single nucleotide variant not specified [RCV004468047] Chr17:40400346 [GRCh38]
Chr17:38556598 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3971C>G (p.Thr1324Arg) single nucleotide variant not specified [RCV004468053] Chr17:40392335 [GRCh38]
Chr17:38548587 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4540C>T (p.Arg1514Trp) single nucleotide variant not specified [RCV004468058] Chr17:40389575 [GRCh38]
Chr17:38545827 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.601G>C (p.Ala201Pro) single nucleotide variant not specified [RCV004468059] Chr17:40412947 [GRCh38]
Chr17:38569199 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.164A>G (p.Glu55Gly) single nucleotide variant not specified [RCV004468044] Chr17:40416753 [GRCh38]
Chr17:38573005 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3923T>C (p.Phe1308Ser) single nucleotide variant not specified [RCV004468052] Chr17:40392626 [GRCh38]
Chr17:38548878 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3779A>G (p.Gln1260Arg) single nucleotide variant not specified [RCV004468050] Chr17:40395481 [GRCh38]
Chr17:38551733 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3991G>T (p.Asp1331Tyr) single nucleotide variant not specified [RCV004468054] Chr17:40392315 [GRCh38]
Chr17:38548567 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.550A>G (p.Arg184Gly) single nucleotide variant not specified [RCV004682594] Chr17:40413221 [GRCh38]
Chr17:38569473 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.301A>G (p.Lys101Glu) single nucleotide variant not specified [RCV004682595] Chr17:40416036 [GRCh38]
Chr17:38572288 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4557A>G (p.Ile1519Met) single nucleotide variant not specified [RCV004682596] Chr17:40389558 [GRCh38]
Chr17:38545810 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.4324A>G (p.Lys1442Glu) single nucleotide variant not specified [RCV004682597] Chr17:40390108 [GRCh38]
Chr17:38546360 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3823A>G (p.Lys1275Glu) single nucleotide variant not specified [RCV004682598] Chr17:40392726 [GRCh38]
Chr17:38548978 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.3089A>G (p.Tyr1030Cys) single nucleotide variant not specified [RCV004682599] Chr17:40399979 [GRCh38]
Chr17:38556231 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.2980A>T (p.Ser994Cys) single nucleotide variant not specified [RCV004682600] Chr17:40400229 [GRCh38]
Chr17:38556481 [GRCh37]
Chr17:17q21.2
uncertain significance
NM_001067.4(TOP2A):c.1615A>G (p.Met539Val) single nucleotide variant not specified [RCV004687568] Chr17:40407560 [GRCh38]
Chr17:38563812 [GRCh37]
Chr17:17q21.2
uncertain significance
GRCh37/hg19 17q12-22(chr17:41196270-41277589) copy number loss Breast-ovarian cancer, familial, susceptibility to, 1 [RCV004759419] Chr17:41196270..41277589 [GRCh37]
Chr17:17q12-22
pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:828
Count of miRNA genes:547
Interacting mature miRNAs:592
Transcripts:ENST00000423485, ENST00000577541, ENST00000577706, ENST00000578412, ENST00000581055
Prediction methods:Microtar, Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406949186GWAS598162_HBMI-adjusted hip circumference QTL GWAS598162 (human)0.0000003BMI-adjusted hip circumferencehip circumference (CMO:0000014)174038894140388942Human
1298406BP16_HBlood pressure QTL 16 (human)0.0004Blood pressurehypertension susceptibility171477864740778647Human
407042279GWAS691255_Hhip circumference QTL GWAS691255 (human)4e-08hip circumferencehip circumference (CMO:0000014)174038894140388942Human
406948660GWAS597636_HBMI-adjusted hip circumference QTL GWAS597636 (human)1e-09BMI-adjusted hip circumferencehip circumference (CMO:0000014)174038894140388942Human
407109588GWAS758564_Hneutrophil percentage of leukocytes QTL GWAS758564 (human)5e-09neutrophil percentage of leukocytesblood neutrophil count to total leukocyte count ratio (CMO:0000370)174039825040398251Human
407161214GWAS810190_Hacute myeloid leukemia QTL GWAS810190 (human)4e-13acute myeloid leukemia174039930540399306Human
407161215GWAS810191_Hacute myeloid leukemia QTL GWAS810191 (human)2e-10acute myeloid leukemia174039930540399306Human
407155592GWAS804568_Hanimal allergen seropositivity QTL GWAS804568 (human)3e-08animal allergen seropositivity174038894140388942Human
407346523GWAS995499_Hdiastolic blood pressure QTL GWAS995499 (human)3e-08diastolic blood pressurediastolic blood pressure (CMO:0000005)174040560140405602Human
407041804GWAS690780_Hhip circumference QTL GWAS690780 (human)9e-08hip circumferencehip circumference (CMO:0000014)174038894140388942Human

Markers in Region
SHGC-12497  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371738,545,618 - 38,545,770UniSTSGRCh37
Build 361735,799,144 - 35,799,296RGDNCBI36
Celera1735,205,761 - 35,205,913RGD
Cytogenetic Map17q21-q22UniSTS
HuRef1734,338,478 - 34,338,630UniSTS
Stanford-G3 RH Map171615.0UniSTS
GeneMap99-GB4 RH Map17311.76UniSTS
Whitehead-RH Map17330.7UniSTS
NCBI RH Map17488.0UniSTS
GeneMap99-G3 RH Map172116.0UniSTS
RH17658  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371738,545,006 - 38,545,277UniSTSGRCh37
Build 361735,798,532 - 35,798,803RGDNCBI36
Celera1735,205,149 - 35,205,420RGD
Cytogenetic Map17q21-q22UniSTS
HuRef1734,337,866 - 34,338,137UniSTS
GeneMap99-GB4 RH Map17309.33UniSTS
NCBI RH Map17506.0UniSTS
D17S1230  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371738,546,340 - 38,546,447UniSTSGRCh37
Build 361735,799,866 - 35,799,973RGDNCBI36
Celera1735,206,483 - 35,206,590RGD
Cytogenetic Map17q21-q22UniSTS
HuRef1734,339,200 - 34,339,307UniSTS
GDB:180937  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371738,545,661 - 38,545,889UniSTSGRCh37
Build 361735,799,187 - 35,799,415RGDNCBI36
Celera1735,205,804 - 35,206,032RGD
Cytogenetic Map17q21-q22UniSTS
HuRef1734,338,521 - 34,338,749UniSTS
RH12872  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371738,555,431 - 38,555,572UniSTSGRCh37
Build 361735,808,957 - 35,809,098RGDNCBI36
Celera1735,215,572 - 35,215,713RGD
Cytogenetic Map17q21-q22UniSTS
HuRef1734,348,287 - 34,348,428UniSTS
GeneMap99-GB4 RH Map17313.78UniSTS
NCBI RH Map17429.9UniSTS
L17787  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371797,798 - 98,140UniSTSGRCh37
GRCh371738,546,107 - 38,546,574UniSTSGRCh37
GRCh37720,411 - 20,891UniSTSGRCh37
GRCh37X35,862,157 - 35,863,514UniSTSGRCh37
Build 361735,799,633 - 35,800,100RGDNCBI36
CeleraX39,989,774 - 39,991,131UniSTS
Celera1735,206,250 - 35,206,717RGD
Cytogenetic Map17q21-q22UniSTS
HuRef1734,338,967 - 34,339,434UniSTS
HuRef1299,437,674 - 99,438,735UniSTS
SHGC-31685  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371738,544,859 - 38,544,984UniSTSGRCh37
Build 361735,798,385 - 35,798,510RGDNCBI36
Celera1735,205,002 - 35,205,127RGD
Cytogenetic Map17q21-q22UniSTS
HuRef1734,337,719 - 34,337,844UniSTS
Stanford-G3 RH Map171574.0UniSTS
GeneMap99-GB4 RH Map17311.76UniSTS
Whitehead-RH Map17330.7UniSTS
NCBI RH Map17488.0UniSTS
GeneMap99-G3 RH Map172075.0UniSTS
D17S1435E  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17q21-q22UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2432 2781 2242 4873 1720 2342 4 619 1948 461 2268 7263 6446 52 3639 847 1731 1612 171

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_027678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005257632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011525165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC080112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF064590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF069522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF285157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF285158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF285159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH006994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ011758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK024080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC013429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC140791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB069825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  J04088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC877654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT584877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L47277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MH936673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S51376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000423485   ⟹   ENSP00000411532
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1740,388,525 - 40,417,896 (-)Ensembl
Ensembl Acc Id: ENST00000577541   ⟹   ENSP00000464055
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1740,388,526 - 40,389,602 (-)Ensembl
Ensembl Acc Id: ENST00000577706
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1740,396,383 - 40,399,261 (-)Ensembl
Ensembl Acc Id: ENST00000578412
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1740,389,562 - 40,392,101 (-)Ensembl
Ensembl Acc Id: ENST00000581055   ⟹   ENSP00000462908
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1740,413,480 - 40,417,705 (-)Ensembl
RefSeq Acc Id: NM_001067   ⟹   NP_001058
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381740,388,525 - 40,417,896 (-)NCBI
GRCh371738,544,773 - 38,574,202 (-)ENTREZGENE
GRCh371738,544,773 - 38,574,202 (-)NCBI
Build 361735,798,321 - 35,827,695 (-)NCBI Archive
HuRef1734,337,633 - 34,367,123 (-)ENTREZGENE
CHM1_11738,780,085 - 38,809,522 (-)NCBI
T2T-CHM13v2.01741,252,019 - 41,281,395 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005257632   ⟹   XP_005257689
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381740,388,525 - 40,417,684 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011525165   ⟹   XP_011523467
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381740,391,506 - 40,417,896 (-)NCBI
Sequence:
RefSeq Acc Id: XM_054317034   ⟹   XP_054173009
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01741,252,019 - 41,281,183 (-)NCBI
RefSeq Acc Id: XM_054317035   ⟹   XP_054173010
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01741,255,000 - 41,281,395 (-)NCBI
RefSeq Acc Id: NP_001058   ⟸   NM_001067
- UniProtKB: Q9UP44 (UniProtKB/Swiss-Prot),   Q9HB26 (UniProtKB/Swiss-Prot),   Q9HB25 (UniProtKB/Swiss-Prot),   Q9HB24 (UniProtKB/Swiss-Prot),   Q71UQ5 (UniProtKB/Swiss-Prot),   Q71UN1 (UniProtKB/Swiss-Prot),   B2RTS1 (UniProtKB/Swiss-Prot),   Q9UQP9 (UniProtKB/Swiss-Prot),   P11388 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005257689   ⟸   XM_005257632
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011523467   ⟸   XM_011525165
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSP00000411532   ⟸   ENST00000423485
Ensembl Acc Id: ENSP00000462908   ⟸   ENST00000581055
Ensembl Acc Id: ENSP00000464055   ⟸   ENST00000577541
RefSeq Acc Id: XP_054173009   ⟸   XM_054317034
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054173010   ⟸   XM_054317035
- Peptide Label: isoform X2
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P11388-F1-model_v2 AlphaFold P11388 1-1531 view protein structure

Promoters
RGD ID:6794648
Promoter ID:HG_KWN:26059
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000269577,   ENST00000348049,   ENST00000357601,   OTTHUMT00000338035
Position:
Human AssemblyChrPosition (strand)Source
Build 361735,827,406 - 35,827,906 (-)MPROMDB
RGD ID:7234927
Promoter ID:EPDNEW_H23210
Type:initiation region
Name:TOP2A_1
Description:topoisomerase II alpha
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381740,417,881 - 40,417,941EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:11989 AgrOrtholog
COSMIC TOP2A COSMIC
Ensembl Genes ENSG00000131747 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000423485 ENTREZGENE
  ENST00000423485.6 UniProtKB/Swiss-Prot
  ENST00000577541.1 UniProtKB/TrEMBL
  ENST00000581055.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.268.10 UniProtKB/Swiss-Prot
  3.30.1360.40 UniProtKB/Swiss-Prot
  3.30.1490.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.230.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.670 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.90.199.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000131747 GTEx
HGNC ID HGNC:11989 ENTREZGENE
Human Proteome Map TOP2A Human Proteome Map
InterPro DNA_Topoisomerase_II UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DTHCT UniProtKB/Swiss-Prot
  HATPase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HATPase_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold_subgr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Topo_IIA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Topo_IIA-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Topo_IIA_A/C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Topo_IIA_A/C_ab UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Topo_IIA_A_a_sf UniProtKB/Swiss-Prot
  Topo_IIA_B_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Topo_IIA_bsu_dom2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TopoII_euk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TopoIIA_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TOPRIM_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TOPRIM_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TOPRIM_TopoII UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:7153 UniProtKB/Swiss-Prot
NCBI Gene 7153 ENTREZGENE
OMIM 126430 OMIM
PANTHER DNA TOPOISOMERASE 2-ALPHA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DNA TOPOISOMERASE/GYRASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DNA_gyraseB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DNA_topoisoIV UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DTHCT UniProtKB/Swiss-Prot
  HATPase_c UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Toprim UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TOPRIM_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA354 PharmGKB, RGD
PRINTS TOPISMRASEII UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPI2FAMILY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE TOPO_IIA UniProtKB/Swiss-Prot
  TOPOISOMERASE_II UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TOPRIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART TOP2c UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TOP4c UniProtKB/Swiss-Prot
Superfamily-SCOP SSF54211 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF55874 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56719 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A4D6UXC9_HUMAN UniProtKB/TrEMBL
  B2RTS1 ENTREZGENE
  J3KTB7_HUMAN UniProtKB/TrEMBL
  J3QR57_HUMAN UniProtKB/TrEMBL
  P11388 ENTREZGENE
  Q71UN1 ENTREZGENE
  Q71UQ5 ENTREZGENE
  Q9HB24 ENTREZGENE
  Q9HB25 ENTREZGENE
  Q9HB26 ENTREZGENE
  Q9UP44 ENTREZGENE
  Q9UQP9 ENTREZGENE
  TOP2A_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary B2RTS1 UniProtKB/Swiss-Prot
  Q71UN1 UniProtKB/Swiss-Prot
  Q71UQ5 UniProtKB/Swiss-Prot
  Q9HB24 UniProtKB/Swiss-Prot
  Q9HB25 UniProtKB/Swiss-Prot
  Q9HB26 UniProtKB/Swiss-Prot
  Q9UP44 UniProtKB/Swiss-Prot
  Q9UQP9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-08-08 TOP2A  DNA topoisomerase II alpha    topoisomerase (DNA) II alpha  Symbol and/or name change 5135510 APPROVED
2015-08-11 TOP2A  topoisomerase (DNA) II alpha    topoisomerase (DNA) II alpha 170kDa  Symbol and/or name change 5135510 APPROVED