MNDA (myeloid cell nuclear differentiation antigen) - Rat Genome Database

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Gene: MNDA (myeloid cell nuclear differentiation antigen) Homo sapiens
Analyze
Symbol: MNDA
Name: myeloid cell nuclear differentiation antigen
RGD ID: 1314505
HGNC Page HGNC:7183
Description: Predicted to enable double-stranded DNA binding activity. Involved in several processes, including B cell receptor signaling pathway; negative regulation of B cell proliferation; and positive regulation of apoptotic process. Located in cytosol and nuclear lumen.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: PYHIN3
RGD Orthologs
Mouse
Rat
Bonobo
Dog
Green Monkey
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381158,831,351 - 158,849,502 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1158,831,351 - 158,849,506 (+)EnsemblGRCh38hg38GRCh38
GRCh371158,801,141 - 158,819,292 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361157,067,792 - 157,085,894 (+)NCBINCBI36Build 36hg18NCBI36
Build 341155,614,240 - 155,632,343NCBI
Celera1131,871,536 - 131,889,615 (+)NCBICelera
Cytogenetic Map1q23.1NCBI
HuRef1130,158,445 - 130,176,628 (+)NCBIHuRef
CHM1_11160,197,828 - 160,215,889 (+)NCBICHM1_1
T2T-CHM13v2.01157,968,444 - 157,986,571 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MNDAHumanautoimmune interstitial lung, joint, and kidney disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Autoimmune interstitial lung disease-arthritis syndromeClinVarPMID:28492532
MNDAHumangastrointestinal stromal tumor  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Gastrointestinal stromal tumorClinVarPMID:28492532
MNDAHumanparathyroid carcinoma  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Parathyroid carcinomaClinVarPMID:28492532

1 to 20 of 85 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MNDAHuman1,2-dichloroethane decreases expressionISOIfi211 (Mus musculus)6480464ethylene dichloride results in decreased expression of PYHIN1 mRNACTDPMID:28960355
MNDAHuman1-naphthyl isothiocyanate increases expressionISOMnda (Rattus norvegicus)64804641-Naphthylisothiocyanate results in increased expression of IFI204 mRNACTDPMID:25380136
MNDAHuman17beta-estradiol multiple interactionsISOMnda (Rattus norvegicus)6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of MNDA mRNACTDPMID:32741896
MNDAHuman17beta-estradiol decreases expressionISOIfi211 (Mus musculus)6480464Estradiol results in decreased expression of IFI211 mRNACTDPMID:39298647
MNDAHuman17beta-estradiol 3-benzoate increases expressionISOMnda (Rattus norvegicus)6480464estradiol 3-benzoate results in increased expression of MNDA mRNACTDPMID:32741896
MNDAHuman17beta-estradiol 3-benzoate multiple interactionsISOMnda (Rattus norvegicus)6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of MNDA mRNACTDPMID:32741896
MNDAHuman2,3,7,8-tetrachlorodibenzodioxine increases expressionISOIfi211 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of MNDA mRNACTDPMID:26290441
MNDAHuman2,3,7,8-tetrachlorodibenzodioxine affects expressionISOIfi211 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of PYHIN1 mRNACTDPMID:26377647
MNDAHuman2,3,7,8-tetrachlorodibenzodioxine increases expressionISOMnda (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of MNDA mRNACTDPMID:33387578
MNDAHuman2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOMnda (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of MNDA mRNACTDPMID:34747641
MNDAHuman2,4,6-trinitrobenzenesulfonic acid increases expressionISOIfi211 (Mus musculus)6480464Trinitrobenzenesulfonic Acid results in increased expression of MNDA mRNACTDPMID:17982090
MNDAHuman2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOIfi211 (Mus musculus)64804642 more ...CTDPMID:38648751
MNDAHuman4,4'-diaminodiphenylmethane increases expressionISOMnda (Rattus norvegicus)64804644 and 4'-diaminodiphenylmethane results in increased expression of IFI204 mRNACTDPMID:25380136
MNDAHuman4-hydroxynon-2-enal decreases expressionEXP 64804644-hydroxy-2-nonenal results in decreased expression of MNDA mRNACTDPMID:12419474
MNDAHumanacetamide increases expressionISOMnda (Rattus norvegicus)6480464acetamide results in increased expression of MNDA mRNACTDPMID:31881176
MNDAHumanall-trans-retinoic acid increases expressionEXP 6480464Tretinoin results in increased expression of MNDA mRNACTDPMID:17218384 and PMID:33167477
MNDAHumanamphetamine increases expressionISOMnda (Rattus norvegicus)6480464Amphetamine results in increased expression of IFI204 mRNACTDPMID:30779732
MNDAHumanantirheumatic drug decreases expressionEXP 6480464Antirheumatic Agents results in decreased expression of MNDA mRNACTDPMID:24449571
MNDAHumanbenzo[a]pyrene decreases expressionEXP 6480464Benzo(a)pyrene results in decreased expression of MNDA mRNACTDPMID:20064835
MNDAHumanbenzo[a]pyrene decreases expressionISOIfi211 (Mus musculus)6480464Benzo(a)pyrene results in decreased expression of PYHIN1 mRNACTDPMID:21569818

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Biological Process
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1 to 9 of 9 rows

Cellular Component
1 to 18 of 18 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MNDAHumanazurophil granule lumen located_inTAS 150520179 ReactomeReactome:R-HSA-6798751
MNDAHumancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
MNDAHumancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
MNDAHumancytosol located_inIDA 150520179 HPAGO_REF:0000052
MNDAHumancytosol is_active_inIBAMGI:2686159 more ...150520179 GO_CentralGO_REF:0000033
MNDAHumanextracellular exosome located_inHDA 150520179 PMID:19056867UniProtPMID:19056867
MNDAHumanextracellular region located_inTAS 150520179 ReactomeReactome:R-HSA-6798751 and Reactome:R-HSA-6800434
MNDAHumanficolin-1-rich granule lumen located_inTAS 150520179 ReactomeReactome:R-HSA-6800434
MNDAHumanintracellular membrane-bounded organelle located_inIDA 150520179 HPAGO_REF:0000052
MNDAHumannuclear periphery located_inIDA 150520179 PMID:19158679MGIPMID:19158679
MNDAHumannuclear speck located_inIDA 150520179 PMID:19158679MGIPMID:19158679
MNDAHumannucleolus located_inIDA 150520179 HPAGO_REF:0000052
MNDAHumannucleolus is_active_inIBAMGI:96429 more ...150520179 GO_CentralGO_REF:0000033
MNDAHumannucleoplasm located_inIDA 150520179 HPAGO_REF:0000052
MNDAHumannucleoplasm is_active_inIBAPANTHER:PTN001385751 more ...150520179 GO_CentralGO_REF:0000033
MNDAHumannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
MNDAHumannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
MNDAHumannucleus located_inIDA 150520179 PMID:19158679MGIPMID:19158679
1 to 18 of 18 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MNDAHumanDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
MNDAHumandouble-stranded DNA binding enablesIBAMGI:101847 more ...150520179 GO_CentralGO_REF:0000033
MNDAHumanprotein binding enablesIPIUniProtKB:O14656-2 more ...150520179 PMID:32814053IntActPMID:32814053
MNDAHumanprotein binding enablesIPIUniProtKB:Q9BZ95150520179 PMID:23455924IntActPMID:23455924

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MNDAHumanGastrointestinal stroma tumor  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Gastrointestinal stromal tumorClinVarPMID:28492532
MNDAHumanParathyroid carcinoma  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Parathyroid carcinomaClinVarPMID:28492532

#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:1377701   PMID:1644857   PMID:7327575   PMID:7512843   PMID:7806273   PMID:8175894   PMID:9712147   PMID:12112016   PMID:12477932   PMID:14618084   PMID:15489334   PMID:15778972  
PMID:16344560   PMID:16458891   PMID:16651415   PMID:17875758   PMID:18029348   PMID:19056867   PMID:19474799   PMID:19490893   PMID:20193116   PMID:20595294   PMID:21873635   PMID:23251661  
PMID:23383108   PMID:23455924   PMID:24557068   PMID:24925224   PMID:25665578   PMID:25814554   PMID:26184452   PMID:26822549   PMID:27503909   PMID:30346478   PMID:30397336   PMID:32682001  
PMID:32814053   PMID:33961781   PMID:34189442   PMID:35271311   PMID:35575683   PMID:38334954   PMID:38680493   PMID:38904028  



MNDA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381158,831,351 - 158,849,502 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1158,831,351 - 158,849,506 (+)EnsemblGRCh38hg38GRCh38
GRCh371158,801,141 - 158,819,292 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361157,067,792 - 157,085,894 (+)NCBINCBI36Build 36hg18NCBI36
Build 341155,614,240 - 155,632,343NCBI
Celera1131,871,536 - 131,889,615 (+)NCBICelera
Cytogenetic Map1q23.1NCBI
HuRef1130,158,445 - 130,176,628 (+)NCBIHuRef
CHM1_11160,197,828 - 160,215,889 (+)NCBICHM1_1
T2T-CHM13v2.01157,968,444 - 157,986,571 (+)NCBIT2T-CHM13v2.0
Ifi211
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391173,723,907 - 173,740,650 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1173,723,911 - 173,740,612 (-)EnsemblGRCm39 Ensembl
GRCm381173,896,339 - 173,913,087 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1173,896,345 - 173,913,046 (-)EnsemblGRCm38mm10GRCm38
MGSCv371175,826,486 - 175,843,053 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361175,733,030 - 175,749,597 (-)NCBIMGSCv36mm8
Cytogenetic Map1H3NCBI
cM Map180.74NCBI
Mnda
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81388,550,224 - 88,567,892 (-)NCBIGRCr8
mRatBN7.21386,017,888 - 86,035,556 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1386,017,892 - 86,034,201 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1388,525,833 - 88,543,479 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01389,926,105 - 89,943,751 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01387,110,842 - 87,128,488 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01392,073,664 - 92,091,335 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1392,073,668 - 92,089,980 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01396,545,815 - 96,606,181 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41389,752,997 - 89,770,167 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11389,941,881 - 89,959,051 (-)NCBI
Celera1385,620,545 - 85,638,000 (-)NCBICelera
Cytogenetic Map13q24NCBI
MNDA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2190,997,756 - 91,015,719 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1190,741,647 - 90,759,598 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01134,190,768 - 134,208,723 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11137,981,896 - 137,999,850 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1137,992,523 - 137,999,587 (+)Ensemblpanpan1.1panPan2
MNDA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13822,921,729 - 22,934,276 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3822,921,732 - 22,934,286 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3822,937,046 - 22,949,840 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03823,047,004 - 23,059,816 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.13822,810,374 - 22,823,159 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03823,345,315 - 23,358,108 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03823,776,349 - 23,783,901 (-)NCBIUU_Cfam_GSD_1.0
MNDA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1205,079,633 - 5,124,967 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl205,079,632 - 5,095,868 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660384,226,792 - 4,271,918 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

.

.
Variants in MNDA
625 total Variants

1 to 10 of 649 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 1q23.1-25.1(chr1:157747246-176021247)x3 copy number gain See cases [RCV000051854] Chr1:157747246..176021247 [GRCh38]
Chr1:157717036..175990383 [GRCh37]
Chr1:155983660..174257006 [NCBI36]
Chr1:1q23.1-25.1
pathogenic
GRCh38/hg38 1q23.1-23.3(chr1:156664483-160727411)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051851]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051851]|See cases [RCV000051851] Chr1:156664483..160727411 [GRCh38]
Chr1:156634275..160697201 [GRCh37]
Chr1:154900899..158963825 [NCBI36]
Chr1:1q23.1-23.3
pathogenic
NM_002432.1(MNDA):c.224T>C (p.Leu75Pro) single nucleotide variant Malignant melanoma [RCV000059942] Chr1:158842377 [GRCh38]
Chr1:158812167 [GRCh37]
Chr1:157078791 [NCBI36]
Chr1:1q23.1
not provided
NM_002432.3(MNDA):c.444G>A (p.Arg148=) single nucleotide variant not specified [RCV004050720] Chr1:158843996 [GRCh38]
Chr1:158813786 [GRCh37]
Chr1:157080410 [NCBI36]
Chr1:1q23.1
likely benign|not provided
NM_002432.1(MNDA):c.961G>A (p.Val321Met) single nucleotide variant Malignant melanoma [RCV000064240] Chr1:158845977 [GRCh38]
Chr1:158815767 [GRCh37]
Chr1:157082391 [NCBI36]
Chr1:1q23.1
not provided
NM_002432.1(MNDA):c.1177-628A>C single nucleotide variant Lung cancer [RCV000089821] Chr1:158848562 [GRCh38]
Chr1:158818352 [GRCh37]
Chr1:1q23.1
uncertain significance
GRCh38/hg38 1q23.1(chr1:158714213-158874430)x1 copy number loss See cases [RCV000137320] Chr1:158714213..158874430 [GRCh38]
Chr1:158684003..158844220 [GRCh37]
Chr1:156950627..157110844 [NCBI36]
Chr1:1q23.1
likely benign
GRCh38/hg38 1q21.2-25.2(chr1:149854269-180267197)x3 copy number gain See cases [RCV000143515] Chr1:149854269..180267197 [GRCh38]
Chr1:149825831..180236332 [GRCh37]
Chr1:148092455..178502955 [NCBI36]
Chr1:1q21.2-25.2
pathogenic
Single allele deletion Large for gestational age [RCV000161185] Chr1:158783616..158907131 [GRCh38]
Chr1:158753406..158876921 [GRCh37]
Chr1:1q23.1
not provided
GRCh37/hg19 1q23.1(chr1:158681430-158849405)x1 copy number loss See cases [RCV000446877] Chr1:158681430..158849405 [GRCh37]
Chr1:1q23.1
likely benign
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Predicted Target Of
Summary Value
Count of predictions:126
Count of miRNA genes:72
Interacting mature miRNAs:72
Transcripts:ENST00000368141, ENST00000438394, ENST00000491210
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357381BW57_HBody weight QTL 57 (human)10.0001Body weightfat free mass after exercise training1140630236166630236Human
597142643GWAS1238717_HCOVID-19 QTL GWAS1238717 (human)5e-13COVID-191158840522158840523Human
597161578GWAS1257652_Hlipid measurement QTL GWAS1257652 (human)0.000002lipid measurementblood lipid measurement (CMO:0000050)1158834083158834084Human

SHGC-145403  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,800,858 - 158,801,200UniSTSGRCh37
Build 361157,067,482 - 157,067,824RGDNCBI36
Celera1131,871,226 - 131,871,568RGD
Cytogenetic Map1q22UniSTS
HuRef1130,158,135 - 130,158,477UniSTS
TNG Radiation Hybrid Map249209.0UniSTS
RH17742  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,819,045 - 158,819,261UniSTSGRCh37
Build 361157,085,669 - 157,085,885RGDNCBI36
Celera1131,889,390 - 131,889,606RGD
Cytogenetic Map1q22UniSTS
HuRef1130,176,403 - 130,176,619UniSTS
GeneMap99-GB4 RH Map1570.57UniSTS
NCBI RH Map11427.3UniSTS
D1S2388  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,819,039 - 158,819,269UniSTSGRCh37
Build 361157,085,663 - 157,085,893RGDNCBI36
Celera1131,889,384 - 131,889,614RGD
Cytogenetic Map1q22UniSTS
HuRef1130,176,397 - 130,176,627UniSTS
TNG Radiation Hybrid Map171723.0UniSTS
Stanford-G3 RH Map16059.0UniSTS
GeneMap99-GB4 RH Map1589.4UniSTS
Whitehead-RH Map1707.7UniSTS
Whitehead-YAC Contig Map1 UniSTS
NCBI RH Map11426.2UniSTS
GeneMap99-G3 RH Map16015.0UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2314 2788 2233 4642 1696 2109 2 607 1837 446 2021 7032 6334 7 3638 800 1631 1397 164



Ensembl Acc Id: ENST00000368141   ⟹   ENSP00000357123
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,831,351 - 158,849,502 (+)Ensembl
Ensembl Acc Id: ENST00000438394   ⟹   ENSP00000406800
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,845,901 - 158,849,506 (+)Ensembl
Ensembl Acc Id: ENST00000491210
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1158,831,351 - 158,842,723 (+)Ensembl
RefSeq Acc Id: NM_002432   ⟹   NP_002423
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,831,351 - 158,849,502 (+)NCBI
GRCh371158,801,168 - 158,819,270 (+)ENTREZGENE
Build 361157,067,792 - 157,085,894 (+)NCBI Archive
HuRef1130,158,445 - 130,176,628 (+)ENTREZGENE
CHM1_11160,197,828 - 160,215,889 (+)NCBI
T2T-CHM13v2.01157,968,444 - 157,986,571 (+)NCBI
Sequence:
1 to 12 of 12 rows
Protein RefSeqs NP_002423 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA69696 (Get FASTA)   NCBI Sequence Viewer  
  AAH20715 (Get FASTA)   NCBI Sequence Viewer  
  AAH32319 (Get FASTA)   NCBI Sequence Viewer  
  ADO22462 (Get FASTA)   NCBI Sequence Viewer  
  BAF83081 (Get FASTA)   NCBI Sequence Viewer  
  BAG36026 (Get FASTA)   NCBI Sequence Viewer  
  EAW52807 (Get FASTA)   NCBI Sequence Viewer  
  EAW52808 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000357123
  ENSP00000357123.4
GenBank Protein P41218 (Get FASTA)   NCBI Sequence Viewer  
1 to 12 of 12 rows
RefSeq Acc Id: NP_002423   ⟸   NM_002432
- UniProtKB: P41218 (UniProtKB/Swiss-Prot),   Q5VUU6 (UniProtKB/TrEMBL),   B2R829 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000406800   ⟸   ENST00000438394
Ensembl Acc Id: ENSP00000357123   ⟸   ENST00000368141
HIN-200   Pyrin

Name Modeler Protein Id AA Range Protein Structure
AF-P41218-F1-model_v2 AlphaFold P41218 1-407 view protein structure

RGD ID:6786047
Promoter ID:HG_KWN:5664
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000059069,   OTTHUMT00000059070
Position:
Human AssemblyChrPosition (strand)Source
Build 361157,067,499 - 157,067,999 (+)MPROMDB
RGD ID:6857696
Promoter ID:EPDNEW_H2013
Type:initiation region
Name:MNDA_1
Description:myeloid cell nuclear differentiation antigen
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H2014  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,831,369 - 158,831,429EPDNEW
RGD ID:6857698
Promoter ID:EPDNEW_H2014
Type:multiple initiation site
Name:MNDA_2
Description:myeloid cell nuclear differentiation antigen
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H2013  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381158,833,051 - 158,833,111EPDNEW


1 to 31 of 31 rows
Database
Acc Id
Source(s)
COSMIC MNDA COSMIC
Ensembl Genes ENSG00000163563 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000368141 ENTREZGENE
  ENST00000368141.5 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.533.10 UniProtKB/Swiss-Prot
  2.40.50.140 UniProtKB/Swiss-Prot
GTEx ENSG00000163563 GTEx
HGNC ID HGNC:7183 ENTREZGENE
Human Proteome Map MNDA Human Proteome Map
InterPro DAPIN UniProtKB/Swiss-Prot
  DEATH-like_dom_sf UniProtKB/Swiss-Prot
  HIN-200 UniProtKB/Swiss-Prot
  HIN200/IF120x UniProtKB/Swiss-Prot
  NA-bd_OB-fold UniProtKB/Swiss-Prot
KEGG Report hsa:4332 UniProtKB/Swiss-Prot
NCBI Gene 4332 ENTREZGENE
OMIM 159553 OMIM
PANTHER MYELOID CELL NUCLEAR DIFFERENTIATION ANTIGEN UniProtKB/Swiss-Prot
  PTHR12200 UniProtKB/Swiss-Prot
Pfam HIN UniProtKB/Swiss-Prot
  PYRIN UniProtKB/Swiss-Prot
PharmGKB PA30895 PharmGKB
PROSITE DAPIN UniProtKB/Swiss-Prot
  HIN_200 UniProtKB/Swiss-Prot
SMART PYRIN UniProtKB/Swiss-Prot
Superfamily-SCOP HIN-2000 domain-like UniProtKB/Swiss-Prot
UniProt B2R829 ENTREZGENE, UniProtKB/TrEMBL
  H0Y6P3_HUMAN UniProtKB/TrEMBL
  MNDA_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q05CU9_HUMAN UniProtKB/TrEMBL
  Q5VUU6 ENTREZGENE, UniProtKB/TrEMBL
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