LIG3 (DNA ligase 3) - Rat Genome Database

Name: LIG3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: LIG3 (DNA ligase 3) Homo sapiens

Analyze

Symbol:

LIG3

Name:

DNA ligase 3

RGD ID:

1320452

HGNC Page

HGNC

Description:

Enables DNA ligase (ATP) activity. Involved in DNA repair and negative regulation of mitochondrial DNA replication. Located in mitochondrion and nucleoplasm. Part of DNA ligase III-XRCC1 complex. Implicated in pancreatic cancer.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

DNA ligase III; LIG2; LIG3alpha; ligase II, DNA, ATP-dependent; ligase III, DNA, ATP-dependent; MTDPS20; polydeoxyribonucleotide synthase [ATP] 3

RGD Orthologs

Mouse

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Lig3 (ligase III, DNA, ATP-dependent)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Rattus norvegicus (Norway rat):	Lig3 (DNA ligase 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Chinchilla lanigera (long-tailed chinchilla):	Lig3 (DNA ligase 3)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	LIG3 (DNA ligase 3)	NCBI	Ortholog
Canis lupus familiaris (dog):	LIG3 (DNA ligase 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Lig3 (DNA ligase 3)	NCBI	Ortholog
Sus scrofa (pig):	LIG3 (DNA ligase 3)	HGNC	EggNOG, Ensembl, NCBI, OrthoDB, Panther, Treefam
Chlorocebus sabaeus (green monkey):	LIG3 (DNA ligase 3)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Lig3 (DNA ligase 3)	NCBI	Ortholog
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Lig3 (DNA ligase 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|sonicParanoid)
Mus musculus (house mouse):	Lig3 (ligase III, DNA, ATP-dependent)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|sonicParanoid)
Danio rerio (zebrafish):	lig3 (ligase III, DNA, ATP-dependent)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|ZFIN\|sonicParanoid)
Caenorhabditis elegans (roundworm):	K07C5.3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder)
Drosophila melanogaster (fruit fly):	DNAlig3	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|sonicParanoid)
Caenorhabditis elegans (roundworm):	Y73B6BL.14	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	34,980,512 - 35,010,872 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	17	34,980,512 - 35,009,743 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	33,307,531 - 33,336,762 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	30,331,651 - 30,356,201 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	17	30,331,696 - 30,355,936	NCBI
Celera	17	30,217,714 - 30,242,284 (+)	NCBI
Cytogenetic Map	17	q12	NCBI
HuRef	17	29,493,447 - 29,518,012 (+)	NCBI		HuRef
CHM1_1	17	33,371,911 - 33,396,481 (+)	NCBI		CHM1_1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Cardiac Arrhythmias (IAGP)

Mitochondrial DNA Depletion Syndrome 20 (IAGP)

Neurodevelopmental Disorders (IAGP)

pancreatic cancer (IAGP)

Reperfusion Injury (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (EXP)

17alpha-ethynylestradiol (ISO)

1H-pyrazole (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-dinitrotoluene (ISO)

3-isobutyl-1-methyl-7H-xanthine (EXP)

4-hydroperoxycyclophosphamide (ISO)

4-hydroxyphenyl retinamide (ISO)

acrylamide (EXP)

aflatoxin B1 (EXP,ISO)

aristolochic acid (EXP)

arsane (EXP)

arsenic atom (EXP)

benzo[a]pyrene (EXP)

benzo[a]pyrene diol epoxide I (EXP)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

C60 fullerene (ISO)

carbon nanotube (ISO)

chlorpyrifos (EXP)

clofibrate (ISO)

curcumin (EXP)

cyclosporin A (EXP)

dexamethasone (EXP)

dicrotophos (EXP)

dorsomorphin (EXP)

doxorubicin (EXP)

entinostat (EXP)

enzyme inhibitor (EXP)

ethyl methanesulfonate (EXP)

formaldehyde (EXP)

genistein (EXP)

glyphosate (EXP)

indometacin (EXP)

iron atom (EXP)

iron(0) (EXP)

ivermectin (EXP)

methyl methanesulfonate (EXP)

Methylazoxymethanol acetate (ISO)

miconazole (ISO)

monocrotophos (EXP)

N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine (EXP)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

potassium bromate (EXP)

potassium chromate (EXP)

rotenone (ISO)

SB 431542 (EXP)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sodium dodecyl sulfate (EXP)

sodium fluoride (ISO)

trichloroethene (ISO)

trichostatin A (EXP)

trimellitic anhydride (ISO)

valproic acid (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

base-excision repair, DNA ligation (IBA,IDA,IEA,IMP,ISO,TAS)

base-excision repair, gap-filling (TAS)

cell division (IEA)

cellular response to DNA damage stimulus (IEA)

DNA biosynthetic process (IEA)

DNA ligation (IBA,IDA,IEA)

DNA recombination (IEA)

DNA repair (IEA)

DNA replication (IEA)

double-strand break repair (IDA)

double-strand break repair via alternative nonhomologous end joining (IBA,IGI)

double-strand break repair via homologous recombination (TAS)

double-strand break repair via nonhomologous end joining (ISO)

lagging strand elongation (IBA)

mitochondrial DNA repair (IBA,IMP,ISO)

mitochondrion organization (IDA)

negative regulation of DNA recombination (ISO)

negative regulation of mitochondrial DNA replication (IMP)

regulation of DNA metabolic process (IEA)

V(D)J recombination (IDA)

Cellular Component

condensed nuclear chromosome (ISO)

cytoplasm (IBA)

DNA ligase III-XRCC1 complex (IBA,IDA)

intracellular organelle (IEA)

mitochondrion (IDA,IEA)

nucleoplasm (IDA,TAS)

nucleus (IDA,IEA,ISO)

synaptonemal complex (ISO)

Molecular Function

ATP binding (IEA)

DNA binding (IEA)

DNA ligase (ATP) activity (IBA,IDA,IEA,IMP)

DNA ligase activity (IDA,IEA,ISO,TAS)

ligase activity (IEA)

metal ion binding (IEA)

nucleotide binding (IEA)

protein binding (IPI)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

base excision repair pathway (IEA)

nucleotide excision repair pathway (TAS)

Phenotype Annotations Click to see Annotation Detail View

Human Phenotype

Abdominal distention (IAGP)

Abdominal pain (IAGP)

Abnormal cell morphology (IAGP)

Abnormal cerebral white matter morphology (IAGP)

Abnormality of the extraocular muscles (IAGP)

Abnormality of the hand (IAGP)

Abnormality of the mitochondrion (IAGP)

Anemia (IAGP)

Arrhythmia (IAGP)

Atrophic muscularis propria (IAGP)

Cachexia (IAGP)

Cirrhosis (IAGP)

Decreased motor nerve conduction velocity (IAGP)

Decreased muscle mass (IAGP)

Decreased number of large peripheral myelinated nerve fibers (IAGP)

Decreased sensory nerve conduction velocity (IAGP)

Dementia (IAGP)

Demyelinating peripheral neuropathy (IAGP)

Diarrhea (IAGP)

Distal muscle weakness (IAGP)

Dysphagia (IAGP)

Easy fatigability (IAGP)

Elevated hepatic transaminase (IAGP)

External ophthalmoplegia (IAGP)

Foot dorsiflexor weakness (IAGP)

Gastroesophageal reflux (IAGP)

Hyperalaninemia (IAGP)

Hypergonadotropic hypogonadism (IAGP)

Hypogonadotropic hypogonadism (IAGP)

Increased CSF protein (IAGP)

Intellectual disability (IAGP)

Lactic acidosis (IAGP)

Leukoencephalopathy (IAGP)

Macrovesicular hepatic steatosis (IAGP)

Nausea (IAGP)

Paresthesia (IAGP)

Peripheral axonal neuropathy (IAGP)

Poor appetite (IAGP)

Ptosis (IAGP)

Ragged-red muscle fibers (IAGP)

Sensorimotor neuropathy (IAGP)

Sensorineural hearing impairment (IAGP)

Small intestinal dysmotility (IAGP)

Vomiting (IAGP)

References

References - curated


1.	GOA_HUMAN data from the GO Consortium
2.	Lehmann AR DNA Repair (Amst). 2011 Jul 15;10(7):730-3. doi: 10.1016/j.dnarep.2011.04.023. Epub 2011 May 20.
3.	Li D, etal., Clin Cancer Res. 2009 Jan 15;15(2):740-6.
4.	Li N, etal., DNA Repair (Amst). 2007 Sep 1;6(9):1297-306. Epub 2007 Apr 6.
5.	OMIM Disease Annotation Pipeline
6.	Pipeline to import KEGG annotations from KEGG into RGD
7.	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:7565692	PMID:7760816	PMID:8264637	PMID:8532526	PMID:8889548	PMID:8978692	PMID:9001252	PMID:9136882	PMID:9363683	PMID:9539976	PMID:9705932	PMID:9809069
PMID:10207110	PMID:11163244	PMID:11281714	PMID:11352725	PMID:11909950	PMID:11994275	PMID:12477932	PMID:12897160	PMID:14627836	PMID:14702039	PMID:15205355	PMID:15260972
PMID:15367657	PMID:15653642	PMID:15744309	PMID:15758953	PMID:16195237	PMID:16341674	PMID:16344560	PMID:16442856	PMID:16492928	PMID:16543152	PMID:16609022	PMID:17054425
PMID:17081983	PMID:17108146	PMID:17203305	PMID:17242407	PMID:17353931	PMID:17474147	PMID:17492771	PMID:17643379	PMID:18029348	PMID:18238776	PMID:18313385	PMID:18440984
PMID:18524993	PMID:18676680	PMID:19064572	PMID:19170196	PMID:19305408	PMID:19339270	PMID:19536092	PMID:19573080	PMID:19589734	PMID:19625176	PMID:19661089	PMID:19692168
PMID:19773279	PMID:20009512	PMID:20226869	PMID:20227374	PMID:20379614	PMID:20403997	PMID:20453000	PMID:20496165	PMID:20518483	PMID:20522537	PMID:20574454	PMID:20644561
PMID:20731661	PMID:20813000	PMID:20843780	PMID:21282530	PMID:21390132	PMID:21620500	PMID:21816818	PMID:21832049	PMID:21873635	PMID:21878356	PMID:22174317	PMID:22242598
PMID:22632162	PMID:22658674	PMID:24292625	PMID:24332808	PMID:24342190	PMID:24407287	PMID:24457600	PMID:24674627	PMID:24711643	PMID:24837021	PMID:24952745	PMID:24981860
PMID:25127141	PMID:25281560	PMID:25544563	PMID:25609649	PMID:25665578	PMID:25817347	PMID:25828893	PMID:25921289	PMID:26130724	PMID:26186194	PMID:26344197	PMID:26449312
PMID:26474068	PMID:26496610	PMID:26549023	PMID:27248496	PMID:27634302	PMID:27637333	PMID:27684187	PMID:28192407	PMID:28330616	PMID:28514442	PMID:28751376	PMID:28846114
PMID:28977666	PMID:29467282	PMID:29507755	PMID:29509190	PMID:29523818	PMID:29568061	PMID:29632340	PMID:29656893	PMID:29668892	PMID:29676528	PMID:29844126	PMID:30021884
PMID:30022792	PMID:30120376	PMID:30260704	PMID:30554943	PMID:30585729	PMID:30699358	PMID:30804502	PMID:30833792	PMID:30940648	PMID:30948266	PMID:30994454	PMID:31034940
PMID:31091453	PMID:31182584	PMID:31239290	PMID:31586073	PMID:31630206	PMID:31665637	PMID:31871319	PMID:32416067	PMID:32457219	PMID:32780723	PMID:32807901	PMID:33030583
PMID:33087274	PMID:33330937	PMID:33644029	PMID:33855352	PMID:33916271	PMID:33961781	PMID:34079125	PMID:34111398	PMID:34239347	PMID:34709727	PMID:34795231	PMID:35140242
PMID:35271311

Genomics

Comparative Map Data

LIG3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	34,980,512 - 35,010,872 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	17	34,980,512 - 35,009,743 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	33,307,531 - 33,336,762 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	30,331,651 - 30,356,201 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	17	30,331,696 - 30,355,936	NCBI
Celera	17	30,217,714 - 30,242,284 (+)	NCBI
Cytogenetic Map	17	q12	NCBI
HuRef	17	29,493,447 - 29,518,012 (+)	NCBI		HuRef
CHM1_1	17	33,371,911 - 33,396,481 (+)	NCBI		CHM1_1

Lig3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	82,671,935 - 82,695,100 (+)	NCBI	GRCm39		mm39
GRCm39 Ensembl	11	82,671,934 - 82,695,100 (+)	Ensembl
GRCm38	11	82,781,109 - 82,804,274 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	82,781,108 - 82,804,274 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	82,594,637 - 82,617,776 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	11	82,597,330 - 82,620,469 (+)	NCBI			mm8
Celera	11	92,400,612 - 92,423,646 (+)	NCBI		Celera
Cytogenetic Map	11	C	NCBI
cM Map	11	50.23	NCBI

Lig3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	10	67,717,796 - 67,741,141 (+)	NCBI	mRatBN7.2
mRatBN7.2 Ensembl	10	67,717,812 - 67,798,414 (+)	Ensembl
Rnor_6.0	10	70,134,734 - 70,158,051 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	70,134,729 - 70,158,055 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	69,765,441 - 69,788,758 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	71,000,287 - 71,021,398 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	10	71,013,909 - 71,035,020 (+)	NCBI
Celera	10	66,662,184 - 66,683,295 (+)	NCBI		Celera
Cytogenetic Map	10	q26	NCBI

Lig3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955481	9,696,054 - 9,715,637 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955481	9,696,050 - 9,716,154 (+)	NCBI	ChiLan1.0	ChiLan1.0

LIG3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	17	22,073,487 - 22,097,754 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	22,074,046 - 22,095,220 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	17	21,776,483 - 21,805,706 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

LIG3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	38,346,275 - 38,366,634 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	38,346,199 - 38,366,193 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	37,569,261 - 37,590,027 (-)	NCBI
ROS_Cfam_1.0	9	39,158,185 - 39,178,954 (-)	NCBI
ROS_Cfam_1.0 Ensembl	9	39,155,826 - 39,178,934 (-)	Ensembl
UMICH_Zoey_3.1	9	37,940,790 - 37,961,563 (-)	NCBI
UNSW_CanFamBas_1.0	9	38,226,708 - 38,247,470 (-)	NCBI
UU_Cfam_GSD_1.0	9	38,314,196 - 38,334,891 (-)	NCBI

Lig3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	37,328,228 - 37,350,583 (-)	NCBI
SpeTri2.0	NW_004936538	206,179 - 228,487 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LIG3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	40,147,681 - 40,183,622 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	40,153,105 - 40,205,077 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	41,714,491 - 41,773,847 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LIG3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	28,487,953 - 28,511,945 (+)	NCBI	ChlSab1.1		chlSab2
ChlSab1.1 Ensembl	16	28,490,434 - 28,511,130 (+)	Ensembl	ChlSab1.1		chlSab2
Vero_WHO_p1.0	NW_023666075	1,476,469 - 1,500,221 (-)	NCBI	Vero_WHO_p1.0

Lig3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624875	2,871,944 - 2,907,757 (+)	NCBI	HetGla_female_1.0		hetGla2

Position Markers

G67577

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	33,325,192 - 33,325,456	UniSTS	GRCh37
Build 36	17	30,349,305 - 30,349,569	RGD	NCBI36
Celera	17	30,235,388 - 30,235,652	RGD
Cytogenetic Map	17	q11.2-q12	UniSTS
HuRef	17	29,511,120 - 29,511,384	UniSTS

G67578

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	33,326,679 - 33,326,983	UniSTS	GRCh37
Build 36	17	30,350,792 - 30,351,096	RGD	NCBI36
Celera	17	30,236,875 - 30,237,179	RGD
Cytogenetic Map	17	q11.2-q12	UniSTS
HuRef	17	29,512,607 - 29,512,911	UniSTS

WI-11743

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	33,324,005 - 33,324,154	UniSTS	GRCh37
Build 36	17	30,348,118 - 30,348,267	RGD	NCBI36
Celera	17	30,234,201 - 30,234,350	RGD
Cytogenetic Map	17	q11.2-q12	UniSTS
HuRef	17	29,509,933 - 29,510,082	UniSTS
GeneMap99-GB4 RH Map	17	296.75	UniSTS
Whitehead-RH Map	17	302.3	UniSTS

G29180

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	33,331,639 - 33,331,773	UniSTS	GRCh37
Build 36	17	30,355,752 - 30,355,886	RGD	NCBI36
Celera	17	30,241,835 - 30,241,969	RGD
Cytogenetic Map	17	q11.2-q12	UniSTS
HuRef	17	29,517,563 - 29,517,697	UniSTS

LIG3_3259

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	33,331,356 - 33,331,969	UniSTS	GRCh37
Build 36	17	30,355,469 - 30,356,082	RGD	NCBI36
Celera	17	30,241,552 - 30,242,165	RGD
HuRef	17	29,517,280 - 29,517,893	UniSTS

D10Chm170

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	33,310,295 - 33,310,518	UniSTS	GRCh37
Celera	17	30,220,491 - 30,220,714	UniSTS
HuRef	17	29,496,224 - 29,496,447	UniSTS

MARC_3929-3930:996679185:1

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	33,325,626 - 33,326,360	UniSTS	GRCh37
Celera	17	30,235,822 - 30,236,556	UniSTS
HuRef	17	29,511,554 - 29,512,288	UniSTS

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	3897
Count of miRNA genes:	1115
Interacting mature miRNAs:	1414
Transcripts:	ENST00000262327, ENST00000378526, ENST00000585370, ENST00000585740, ENST00000585941, ENST00000586058, ENST00000586119, ENST00000586407, ENST00000586435, ENST00000588109, ENST00000588713, ENST00000590181, ENST00000590630, ENST00000592244, ENST00000592690, ENST00000593099
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

visual system

adipose tissue

appendage

entire extraembryonic component

pharyngeal arch

High

Medium

1194

695

965

108

674

2344

712

1284

1306

1123

1571

Low

1245

2280

761

516

1266

417

2013

1479

2448

326

154

490

103

1113

1217

Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NG_029221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_002311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_013975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005257970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006721896	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017024624	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047435968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047435969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047435970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047435971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047435972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AA872458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB462562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB470625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB470626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC004223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC022903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF491645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK091492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK125853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK300363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK308407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AW166526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC009026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC068005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BG470103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM467239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM726768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM759573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB100562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204827	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204829	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204830	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204832	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204835	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204836	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204839	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204841	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204848	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HQ204865	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U40671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X84740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENST00000262327 ⟹ ENSP00000262327

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,980,546 - 35,003,172 (+)	Ensembl

RefSeq Acc Id:

ENST00000378526 ⟹ ENSP00000367787

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,980,512 - 35,009,743 (+)	Ensembl

RefSeq Acc Id:

ENST00000585370 ⟹ ENSP00000465288

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,997,756 - 34,998,671 (+)	Ensembl

RefSeq Acc Id:

ENST00000585740 ⟹ ENSP00000467757

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,980,559 - 34,992,607 (+)	Ensembl

RefSeq Acc Id:

ENST00000585941 ⟹ ENSP00000468479

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,980,512 - 34,994,429 (+)	Ensembl

RefSeq Acc Id:

ENST00000586058

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,994,187 - 34,998,254 (+)	Ensembl

RefSeq Acc Id:

ENST00000586119

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,997,718 - 35,001,293 (+)	Ensembl

RefSeq Acc Id:

ENST00000586407

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,980,640 - 34,989,540 (+)	Ensembl

RefSeq Acc Id:

ENST00000586435

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,986,094 - 34,991,314 (+)	Ensembl

RefSeq Acc Id:

ENST00000588109 ⟹ ENSP00000466278

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,983,452 - 34,991,065 (+)	Ensembl

RefSeq Acc Id:

ENST00000588713

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,994,275 - 34,996,373 (+)	Ensembl

RefSeq Acc Id:

ENST00000590181

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,980,577 - 34,989,880 (+)	Ensembl

RefSeq Acc Id:

ENST00000590630

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,991,637 - 34,997,825 (+)	Ensembl

RefSeq Acc Id:

ENST00000592244

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	35,002,834 - 35,004,372 (+)	Ensembl

RefSeq Acc Id:

ENST00000592690 ⟹ ENSP00000467063

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,980,558 - 34,989,657 (+)	Ensembl

RefSeq Acc Id:

ENST00000593099

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p13 Ensembl	17	34,997,034 - 35,004,804 (+)	Ensembl

RefSeq Acc Id:

NM_002311 ⟹ NP_002302

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,980,512 - 35,003,153 (+)	NCBI
GRCh37	17	33,307,517 - 33,332,088 (+)	ENTREZGENE
Build 36	17	30,331,651 - 30,354,281 (+)	NCBI Archive
HuRef	17	29,493,447 - 29,518,012 (+)	ENTREZGENE
CHM1_1	17	33,371,911 - 33,394,584 (+)	NCBI

Sequence:

show sequence

GCTCTAGGACCCGGATTTAAAGAGACAGGCGCTCCAACCGTCGTGGGCTGCCCGCGGCCTGTAA
TGAGCAAGTTCCGAGGCCTACGGTGAGCGCCGGAGCCGGAGAGGCAGCTATATGTCTTTGGCTT
TCAAGATCTTCTTTCCACAAACCCTCCGTGCACTCAGCCGAAAAGAACTGTGCCTATTCCGAAA
ACATCACTGGCGTGATGTAAGACAATTCAGCCAGTGGTCAGAAACAGATCTGCTTCATGGACAT
CCCCTCTTCCTGAGAAGAAAGCCTGTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTGCCA
CCTACCTTGTTTTCTTGCCAGGGTTGCATGTGGGACTCTGCAGTGGCCCCTGTGAGATGGCTGA
GCAACGGTTCTGTGTGGACTATGCCAAGCGTGGCACAGCTGGCTGCAAAAAATGCAAGGAAAAG
ATTGTGAAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTG
ATATGAAAGAGTGGTACCACATTAAATGCATGTTTGAGAAACTAGAGCGGGCCCGGGCCACCAC
AAAAAAAATCGAGGACCTCACAGAGCTGGAAGGCTGGGAAGAGCTGGAAGATAATGAGAAGGAA
CAGATAACCCAGCACATTGCAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTG
TTGTCCAGGCTAAGTTGACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGT
CACCAGTACCAATCCCCGGAAATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAGCC
CCCTCGAGCCCCACCCCTAAGAGAAGTCTGTCTTCAAGCAAATGTGACCCCAGGCATAAGGACT
GTCTGCTACGGGAGTTTCGAAAGTTATGCGCCATGGTGGCCGATAATCCTAGCTACAACACGAA
GACCCAGATCATCCAGGACTTCCTTCGGAAAGGCTCAGCAGGAGATGGTTTCCACGGTGATGTG
TACCTAACAGTGAAGCTGCTGCTGCCAGGAGTCATTAAGACTGTTTACAACTTGAACGATAAGC
AGATTGTGAAGCTTTTCAGTCGCATTTTTAACTGCAACCCAGATGATATGGCACGGGACCTAGA
GCAGGGTGACGTGTCAGAGACAATCAGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCCCCCAGCT
GCCAAGAGCCTCCTTACCATCCAGGAAGTGGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCA
AGGAGGATGAGCAGCAACAGGCCCTACAGGACATTGCCTCCAGGTGTACAGCCAATGACCTTAA
ATGCATCATCAGGTTGATCAAACATGATCTGAAGATGAACTCAGGTGCAAAACATGTGTTAGAC
GCCCTTGACCCCAATGCCTATGAAGCCTTCAAAGCCTCGCGCAACCTGCAGGATGTGGTGGAGC
GGGTCCTTCACAACGCGCAGGAGGTGGAGAAGGAGCCGGGCCAGAGACGAGCTCTGAGCGTCCA
GGCCTCGCTGATGACACCTGTGCAGCCCATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATGCA
ATGAAGAAATGTCCCAATGGCATGTTCTCTGAGATCAAGTACGATGGAGAGCGAGTCCAGGTGC
ATAAGAATGGAGACCACTTCAGCTACTTCAGCCGCAGTCTCAAGCCCGTCCTTCCTCACAAGGT
GGCCCACTTTAAGGACTACATTCCCCAGGCTTTTCCTGGGGGCCACAGCATGATCTTGGATTCT
GAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACA
AGAAAGCAGCCTTCCAGGATGCTAATGTCTGCCTGTTTGTTTTTGATTGTATCTACTTTAATGA
TGTCAGCTTGATGGACAGACCTCTGTGTGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGAA
ATTCCAAACCGGATCATGTTCTCAGAAATGAAGCGAGTCACAAAAGCTTTGGACTTGGCTGACA
TGATAACCCGGGTGATCCAGGAGGGATTGGAGGGGCTGGTGCTGAAGGATGTGAAGGGTACATA
TGAGCCTGGGAAGCGGCACTGGCTGAAAGTGAAGAAAGACTATTTGAACGAGGGGGCCATGGCC
GACACAGCTGACCTGGTGGTCCTTGGAGCCTTCTATGGGCAAGGGAGCAAAGGCGGCATGATGT
CAATCTTCCTCATGGGCTGCTACGACCCTGGCAGCCAGAAGTGGTGCACAGTCACCAAGTGTGC
AGGAGGCCATGATGATGCCACGCTTGCCCGCCTGCAGAATGAACTAGACATGGTGAAGATCAGC
AAGGACCCCAGCAAAATACCCAGCTGGTTGAAGGTCAACAAGATCTACTATCCTGACTTCATCG
TCCCAGACCCAAAGAAAGCTGCCGTGTGGGAGATCACAGGGGCTGAATTCTCCAAATCGGAGGC
TCATACAGCTGACGGGATCTCCATCCGATTCCCTCGCTGCACCCGAATCCGAGATGATAAGGAC
TGGAAATCTGCCACTAACCTTCCCCAACTCAAGGAACTGTACCAGTTGTCCAAGGAGAAGGCAG
ACTTCACTGTAGTGGCTGGAGATGAGGGGAGCTCCACTACAGGGGGTAGCAGTGAAGAGAATAA
GGGTCCCTCAGGGTCTGCTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAA
GCAGAAGGGAAGCTGAGTAACTCCAACAGCAAAGATGGCAACATGCAGACTGCAAAGCCTTCCG
CTATGAAGGTGGGGGAGAAGCTGGCCACAAAGTCTTCTCCAGTGAAAGTAGGGGAGAAGCGGAA
AGCTGCTGATGAGACGCTGTGCCAAACAAAGAGGCGGCCAGCCAGTGAGCAGAGAGGAAGAACT
GTGCCAGCAGGCAGGAGATAGAACAGCCCGGCCTAGCCAGGAGAGACTGCAGGGACTCACTCAG
CTGCTGGCCCCAAGTCAAAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCA

hide sequence

RefSeq Acc Id:

NM_013975 ⟹ NP_039269

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,980,512 - 35,009,743 (+)	NCBI
GRCh37	17	33,307,517 - 33,332,088 (+)	ENTREZGENE
Build 36	17	30,331,651 - 30,356,201 (+)	NCBI Archive
HuRef	17	29,493,447 - 29,518,012 (+)	ENTREZGENE
CHM1_1	17	33,371,911 - 33,396,481 (+)	NCBI

Sequence:

show sequence

GCTCTAGGACCCGGATTTAAAGAGACAGGCGCTCCAACCGTCGTGGGCTGCCCGCGGCCTGTAA
TGAGCAAGTTCCGAGGCCTACGGTGAGCGCCGGAGCCGGAGAGGCAGCTATATGTCTTTGGCTT
TCAAGATCTTCTTTCCACAAACCCTCCGTGCACTCAGCCGAAAAGAACTGTGCCTATTCCGAAA
ACATCACTGGCGTGATGTAAGACAATTCAGCCAGTGGTCAGAAACAGATCTGCTTCATGGACAT
CCCCTCTTCCTGAGAAGAAAGCCTGTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTGCCA
CCTACCTTGTTTTCTTGCCAGGGTTGCATGTGGGACTCTGCAGTGGCCCCTGTGAGATGGCTGA
GCAACGGTTCTGTGTGGACTATGCCAAGCGTGGCACAGCTGGCTGCAAAAAATGCAAGGAAAAG
ATTGTGAAGGGCGTATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTG
ATATGAAAGAGTGGTACCACATTAAATGCATGTTTGAGAAACTAGAGCGGGCCCGGGCCACCAC
AAAAAAAATCGAGGACCTCACAGAGCTGGAAGGCTGGGAAGAGCTGGAAGATAATGAGAAGGAA
CAGATAACCCAGCACATTGCAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTG
TTGTCCAGGCTAAGTTGACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGT
CACCAGTACCAATCCCCGGAAATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAGCC
CCCTCGAGCCCCACCCCTAAGAGAAGTCTGTCTTCAAGCAAATGTGACCCCAGGCATAAGGACT
GTCTGCTACGGGAGTTTCGAAAGTTATGCGCCATGGTGGCCGATAATCCTAGCTACAACACGAA
GACCCAGATCATCCAGGACTTCCTTCGGAAAGGCTCAGCAGGAGATGGTTTCCACGGTGATGTG
TACCTAACAGTGAAGCTGCTGCTGCCAGGAGTCATTAAGACTGTTTACAACTTGAACGATAAGC
AGATTGTGAAGCTTTTCAGTCGCATTTTTAACTGCAACCCAGATGATATGGCACGGGACCTAGA
GCAGGGTGACGTGTCAGAGACAATCAGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCCCCCAGCT
GCCAAGAGCCTCCTTACCATCCAGGAAGTGGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCA
AGGAGGATGAGCAGCAACAGGCCCTACAGGACATTGCCTCCAGGTGTACAGCCAATGACCTTAA
ATGCATCATCAGGTTGATCAAACATGATCTGAAGATGAACTCAGGTGCAAAACATGTGTTAGAC
GCCCTTGACCCCAATGCCTATGAAGCCTTCAAAGCCTCGCGCAACCTGCAGGATGTGGTGGAGC
GGGTCCTTCACAACGCGCAGGAGGTGGAGAAGGAGCCGGGCCAGAGACGAGCTCTGAGCGTCCA
GGCCTCGCTGATGACACCTGTGCAGCCCATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATGCA
ATGAAGAAATGTCCCAATGGCATGTTCTCTGAGATCAAGTACGATGGAGAGCGAGTCCAGGTGC
ATAAGAATGGAGACCACTTCAGCTACTTCAGCCGCAGTCTCAAGCCCGTCCTTCCTCACAAGGT
GGCCCACTTTAAGGACTACATTCCCCAGGCTTTTCCTGGGGGCCACAGCATGATCTTGGATTCT
GAAGTGCTTCTGATTGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACA
AGAAAGCAGCCTTCCAGGATGCTAATGTCTGCCTGTTTGTTTTTGATTGTATCTACTTTAATGA
TGTCAGCTTGATGGACAGACCTCTGTGTGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGAA
ATTCCAAACCGGATCATGTTCTCAGAAATGAAGCGAGTCACAAAAGCTTTGGACTTGGCTGACA
TGATAACCCGGGTGATCCAGGAGGGATTGGAGGGGCTGGTGCTGAAGGATGTGAAGGGTACATA
TGAGCCTGGGAAGCGGCACTGGCTGAAAGTGAAGAAAGACTATTTGAACGAGGGGGCCATGGCC
GACACAGCTGACCTGGTGGTCCTTGGAGCCTTCTATGGGCAAGGGAGCAAAGGCGGCATGATGT
CAATCTTCCTCATGGGCTGCTACGACCCTGGCAGCCAGAAGTGGTGCACAGTCACCAAGTGTGC
AGGAGGCCATGATGATGCCACGCTTGCCCGCCTGCAGAATGAACTAGACATGGTGAAGATCAGC
AAGGACCCCAGCAAAATACCCAGCTGGTTGAAGGTCAACAAGATCTACTATCCTGACTTCATCG
TCCCAGACCCAAAGAAAGCTGCCGTGTGGGAGATCACAGGGGCTGAATTCTCCAAATCGGAGGC
TCATACAGCTGACGGGATCTCCATCCGATTCCCTCGCTGCACCCGAATCCGAGATGATAAGGAC
TGGAAATCTGCCACTAACCTTCCCCAACTCAAGGAACTGTACCAGTTGTCCAAGGAGAAGGCAG
ACTTCACTGTAGTGGCTGGAGATGAGGGGAGCTCCACTACAGGGGGTAGCAGTGAAGAGAATAA
GGGTCCCTCAGGGTCTGCTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAA
GCAGAAGGGAAGCTGAGTAACTCCAACAGCAAAGATGGCAACATGCAGACTGCAAAGCCTTCCG
CTATGAAGGTGGGGGAGAAGCTGGCCACAAAGTCTTCTCCAGTGAAAGTAGGGGAGAAGCGGAA
AGCTGCTGATGAGACGCTGTGCCAAACAAAGGTATTGCTGGACATCTTCACTGGGGTGCGGCTT
TACTTGCCACCCTCCACACCAGACTTCAGCCGTCTCAGACGCTACTTTGTGGCATTCGACGGGG
ACCTGGTACAGGAATTTGATATGACTTCAGCCACGCACGTGCTGGGTAGCAGGGACAAGAACCC
TGCGGCCCAGCAGGTCTCCCCAGAGTGGATTTGGGCATGTATCCGGAAACGGAGACTGGTAGCT
CCCTGCTAGGTTTGCTGTCTTCCCTCTCCCTCAGGCCATACTCTCCTTTACCATACTACTGGAC
TGGACTCAGGCTGGAGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCCA
CCAGTTCTCCACTGTCTCTTCTGGACCAGGAATTAGTTGCTGTGGGTGCCACAGCTGAAGTCAG
TTTGTCTTGCTGGTTTAAATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTT
CTTTGAAAAGCAGCTTAGTTACCCTTTTTATAAATAAAATATCTTGCAGTTATCTTTGTCCTTT
CCCCACCTACACCCCCAATAATTTCCCTAGAGATTAAGGAGTAAAGGCTGGGCTATGGCAGCTC
TGTCCACAAAGCCTTCTCTCCCATCCTTGCCTGTTCCTTTGTACTTCCAGGCTCATTTTAAAGT
TGTATTTAAAGGACTGCCCTCGGAAATGCTTCTGTTTAGCGGAACTTGTATTCAGCCTGACACG
CTTTGCCAGGAACAAACCTCATGTGAAAGAAAACAAAATGAATTTTTTTACTTTCTTCTCTGTG
TTCTCCTATTACATGGTGAGGATCCCCAGTTTGAAGGGAGGGGACTAGGGTCAGGTAGGAAAAT
GGGGCCTTTATGAAGAAAGGGGAGGTTATTTGGGCCACTCCTCTGGAGGGATAGAGGGCTCCAG
GAAGATCTGCATCCCCAAAACCTGGAAACAAGACTGTTCTTTAAGAATAAAAATCCACATGGGG
CTTGAGGCCAAGAACAGCCCTTGTTGCCACCAACATGGAGACTTTGTACCATATCCCATTCTTA
GTGCTCGAGTGTTCCAACCTGAAGTTGAAGAAGCCACCCTGGCTGCACATGCCATCAGCCATGA
CTGTGTATGCTCTGGTGGTGGTGTCTTACTTCCTCATGACTGGAGGAATAATTATATGATATTG
TTGAACCCCCAAGTATTGGCTGATGAACGTGGGCATCAGAGGCCAGTAGCTTTCTTGGCCTACA
AAGTAAATGGACAGTATATTATGGAAGGATTTGCATCCAGCTTCCTGTTTACAATGGGAGGTTT
AGGTTTCATAATGCTGGACCAGTCGAATGCACCAAATATCCCAAAACTCAATCGATTTTTTTTC
TTCTATTCATTGGATTCGTCTGTGTCCTACTGAGTTTTTTCATGGCTGGAGTATTCATGTGAAT
GAAACTGCCGGGCTATCTGATGGGTTAGAGCGCCTTTAAGAAGAAATCAGTGGATACTGGATTT
GCTCCTGTCAATGAAGTTCTAAAGGCTGTACCAATCCTCCAATATGAAATGTGGGAAAGAATGA
AGAGCAGCAGTAAAAGAAATACCTAGCGAAAAAAACAGGAAGCATATTGAAGCTCGGACTAGAA
TTTCTTCTTGGTATCAGAGAGACAAGTTTATCACAGTATTTTTTTTTTTCCTGCTGACCTATTG
ATAATACCAACAATGTTGAGTGGCATTTTCTTCTTAGTTTTTAATTTCTTAAAGAAAATATACT
CCATATCTGCAGGGAAAAAAATAAAAATCCACACCTGAGAACAGATCCATACAACCTGCTTACA
AAGAACAGCTCCTGTGCTACCTGAGGCTGATTTATTTGAAGAACAAAAGGAAGAGAGACAATTT
AGTGTAGACAAGTGCTATTCAATAGAACTTTTTGCAGCAGTGGAAATATCCATAAATCTGCAGT
ATCCAACCAAACTAGCCACAGACAGCTGCTGAGCAATTGAAATGAAGCTGGCACAACTAAGGAA
CTGAAGTTCTTATTTTAATTCAACTTCAAATGGTCACATGTCACTAGTGACTACCACACTGGAC
AGTGCAGGTGTAGACGGAGTTCAGATCAGACTCCTGAAACTTAATGGCTCTAACCTTAGGCAAG
TTACGTTAACATCTAAGCCTCAATCCCTCCAAGTAGAATGGGTGCACCTAAATCATAGGGTTGT
CCTGTTGTCCTGAGCAACATTATGTAAAGCACTTAGCCCAGAGCCTAGCACATAGTTATCTAGA
GTTGGGAACGTCACTCCTGGTGTGCATGTCCAGACCCTACCCGGGAGAAGGGCCTAACCTATGA
CTTTAGAACCCTCAGTTGCAGGTGTGCATGTTCCAGCCAACACTCCACTCTGAGTGCAGGCTCA
TCAGGACACCATATGGTTGTAAACTGGCTGCCATGTCCCAATCCTTCCAGCTCTTGAGGGTCAG
TTCTCACCTTATGAACAAATTAACAGGCTCTGGACCTATAAGATCAAGGACCACTGCGCCCCCT
GGCCACCCCACCGCCCCCCCCCAACTTTGATCTGATTGACTTTGGCTTCCACCTACTGTTTAAA
ATGTGTATGTTGGGGGAGTAGGGACAGCACGGGGGAGGGGTTTACTTTCCTGACTCTAGCCCAG
GACATTTGGTGTTTTTGAATAGGCACCATTCAGCCTTGCTTCAGTATTAGGAATAAGATACTTT
TTATTCCATCCTCTATGGAGACAAAAAGCTGCTCCTCCTTTGAGTACTGACCTACATAGATTTC
CATTTCTCTCTTCAGCCTCAGGCCAAACAAACAACCGGACAGGGCAGCAGAACAAGGCTGTCTC
CTCAGGATCCTGCCAAAGGCACTGTCCTCTCCAACCTGGACCCAGCCCCACTTGCCCTTATTGG
TTGCTTACACCCAGAGTGCACACTCACAGGAAAGGGCCTCTGCTGGCTGCAGGTGATCATCTTG
TCCCTTCTCTGCCTTAGTGTGTGTTATTGCCATTTCAATGTCAGTGGTTTTTTATGTATTTTCT
TCCAGTCTTTGCTGCTGAGATCTGACTGTATATACTATTTTGTATCCTTTCATGTATTTCTTTC
ATGTATTTCAATGCAGCCCTCAACATCATCATCATAAATCTCTCCAGCAGAATGCTGGAGGCCT
CCCTCTTCTGAACCTCTACATGCTGCTGGCTGGCATCAAGCAGAGGTCATCACTGGGTGCTGAA
CAGGTCAGCTCCCTAGGGCAATGTGAGCAAAGTGTTGTGGCTCATCCTCGATCCTTTATGCCCT
TTTGGCAAGATTCCTTTCTCTTCTCAGTCACAGCAGATGGACACATAATCTTGTTCTCCCAGGG
GCTGCATTCTCAGTAGTCTTTTCCCTGCTCCTTGGGCGCCTGGTCAGGGAGGTTTGTACAAGCC
TGCGCACACACAGCAGTCTGTCACGAGGCTGGGCCAACCTTTTTTTTTTTTTTAAACAGACTCT
TGCTCTGTCATTCAGGCTGGAGTGCAGTGGTGCAATCTCAGCTCACTGCAACCTCTGCTTCCCG
GGTTCACAAGCAATTCTCATGCCTCAGCCTCCCAAGTGGCTAAGACTTAACAAACAGGCACACA
CCATCACTCGCAGCTAAGTTTTTGTATTTTTAGTAGAGACCACGTTTCGCCATGTTGTCCAGAC
TGGTCTCAAACTCCTGGCCTCGAGTCATCCACGCACCTCAGCCTCCCAAAGTGCTGGGATTACA
GGCGTGAGCCATGGCGCCCAGCCTGGGCCAACCTTTTCTGAGCCATAGTCCAGCTGTACTACAG
CTGTATCCAAAAGGTACCATGTATCTCCCAGGGTAACCTGAAGACCTAACTGGGCATACTAACT
GTCCTCAGATTTCAGTTCTTTAAGGCCCATCTCTTCTAGATCAGTGTAAATATCTGAACTCACT
TGGTGCTTCAACCCAATTGGTCTTGGGATTCATCCTTTACCTACCCAGCTCTCATTCTCTTCTA
GGTTGTTCCATGGCCTCTTCCATATATTACATTTGTGGTCTTGAGCAAGTTAGTTAGTTACAAC
AACACTGAGCATCTTGACCAAGGTCACTTGGCCCAACCACAGGCTAATCCCAGGCCATGTGCAC
ATCCCAGGATTAGCTTGTGGTTTATCAGTTGTCAATTTTTTTTTTTTTTTAATACAGGGTCTCA
CTCTGTCACCCTGGCTGGAGTGCGGTGGCGATCAGAGCTCACTGCAGCTTCAATCTCCTGGCTC
AAGTGATCCTCCCACCTCAGCCTTCCAAGTAGTTGGGACTACCCACATGCACCACCATGCACGG
CTAATTTTTTGGTTTTTTTGGGTTTTTTGTTTGTGTTTTTTTTTGTTTTGTTTTTTGAGACAGA
GTCTCGCTCTTTCGCCCAGGCCGGACTGCAGTGGCGCAATCTTGGCTCACTGCAAGCTCCGCCT
CCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCAC
CACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGGTGGT
CTCGATCTCCTGACCTCGTGATCTGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTG
AGCCACCGCACCCGGCCCTTGTTTGTTTTTTTAAGTAGAGACAAGGTCTCACTACATTGCCCAG
GTTGGTCTCAAACTCCTGAGCTCAAGCAGTCTTCCCACCTTGGCCTCCTAAAGTGTGGAAATTA
TAGCATGAACCACTGTCAGGCTCTTTTGTCAGTCCTATCAACCTCTAACATCCTCGCACCAGAC
AGGACAGGTGTCTGTATTGAAACTTTATTACAAAATTATAAAGCAGAGCTCTGTAACAAAATAA
TACACATTTGGGTTTGCTTTAACCTCCAAGTAAGTCTGAGAAAATCTTAATAAAAGCCACTTGA
AGTAACAATTCACATCCAAGAGATTTCCACAAATTTATACAATGTATATTGAGCACTAGTTCCT
GTACAGCTTATTCTTATTAGTTTGGATCCAACTATTCCAATGTATTATGAACCAGTCAGCTATC
TGTCTTTTGAAACAAGTCTTAACTGAAATCTCAGAGTAATCAGCAAAAGCTACGGAATAATTCT
AAGAATTAGATGTTTCCATATCATTAAAACCAAGGATCCATGAGGGGCAGAAGGGAGGATTCAA
AGATTTAAAAAAAATCAAATTTTAGACCTTGGTTAAATATTAACTGGAATGGGATCTTGGAACT
CCCAACTTTAATTTGGTGTAATAAAAATGATGCAAAAAAAAAAAAAATCAGGGTTGTTTGACAC
CTTTTTTCCTAAAGGGAAACCTTCACCAAAAGGGGATAAAAGATTTAAAGGCAAAATGAGTAAA
CAACCTCAGTTTTAATTCTTACTGAGGTTACTAACCAGCTATCAGTATATTATTTTCGATTT

hide sequence

RefSeq Acc Id:

XM_005257970 ⟹ XP_005258027

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,980,512 - 35,009,743 (+)	NCBI
GRCh37	17	33,307,517 - 33,332,088 (+)	NCBI

Sequence:

show sequence

TGCCTCCCGCTCTAGGACCCGGATTTAAAGAGACAGGCGCTCCAACCGTCGTGGGCTGCCCGCG
GCCTGTAATGAGCAAGTTCCGAGGCCTACGCTATATGTCTTTGGCTTTCAAGATCTTCTTTCCA
CAAACCCTCCGTGCACTCAGCCGAAAAGAACTGTGCCTATTCCGAAAACATCACTGGCGTGATG
TAAGACAATTCAGCCAGTGGTCAGAAACAGATCTGCTTCATGGACATCCCCTCTTCCTGAGAAG
AAAGCCTGTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTGCCACCTACCTTGTTTTCTTG
CCAGGGTTGCATGTGGGACTCTGCAGTGGCCCCTGTGAGATGGCTGAGCAACGGTTCTGTGTGG
ACTATGCCAAGCGTGGCACAGCTGGCTGCAAAAAATGCAAGGAAAAGATTGTGAAGGGCGTATG
CCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGATATGAAAGAGTGGTAC
CACATTAAATGCATGTTTGAGAAACTAGAGCGGGCCCGGGCCACCACAAAAAAAATCGAGGACC
TCACAGAGCTGGAAGGCTGGGAAGAGCTGGAAGATAATGAGAAGGAACAGATAACCCAGCACAT
TGCAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTGTTGTCCAGGCTAAGTTG
ACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCC
GGAAATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAGCCCCCTCGAGCCCCACCCC
TAAGAGAAGTCTGTCTTCAAGCAAATGTGACCCCAGGCATAAGGACTGTCTGCTACGGGAGTTT
CGAAAGTTATGCGCCATGGTGGCCGATAATCCTAGCTACAACACGAAGACCCAGATCATCCAGG
ACTTCCTTCGGAAAGGCTCAGCAGGAGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCT
GCTGCTGCCAGGAGTCATTAAGACTGTTTACAACTTGAACGATAAGCAGATTGTGAAGCTTTTC
AGTCGCATTTTTAACTGCAACCCAGATGATATGGCACGGGACCTAGAGCAGGGTGACGTGTCAG
AGACAATCAGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCCCCCAGCTGCCAAGAGCCTCCTTAC
CATCCAGGAAGTGGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAA
CAGGCCCTACAGGACATTGCCTCCAGGTGTACAGCCAATGACCTTAAATGCATCATCAGGTTGA
TCAAACATGATCTGAAGATGAACTCAGGTGCAAAACATGTGTTAGACGCCCTTGACCCCAATGC
CTATGAAGCCTTCAAAGCCTCGCGCAACCTGCAGGATGTGGTGGAGCGGGTCCTTCACAACGCG
CAGGAGGTGGAGAAGGAGCCGGGCCAGAGACGAGCTCTGAGCGTCCAGGCCTCGCTGATGACAC
CTGTGCAGCCCATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCAA
TGGCATGTTCTCTGAGATCAAGTACGATGGAGAGCGAGTCCAGGTGCATAAGAATGGAGACCAC
TTCAGCTACTTCAGCCGCAGTCTCAAGCCCGTCCTTCCTCACAAGGTGGCCCACTTTAAGGACT
ACATTCCCCAGGCTTTTCCTGGGGGCCACAGCATGATCTTGGATTCTGAAGTGCTTCTGATTGA
CAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGAAAGCAGCCTTCCAG
GATGCTAATGTCTGCCTGTTTGTTTTTGATTGTATCTACTTTAATGATGTCAGCTTGATGGACA
GACCTCTGTGTGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGAAATTCCAAACCGGATCAT
GTTCTCAGAAATGAAGCGAGTCACAAAAGCTTTGGACTTGGCTGACATGATAACCCGGGTGATC
CAGGAGGGATTGGAGGGGCTGGTGCTGAAGGATGTGAAGGGTACATATGAGCCTGGGAAGCGGC
ACTGGCTGAAAGTGAAGAAAGACTATTTGAACGAGGGGGCCATGGCCGACACAGCTGACCTGGT
GGTCCTTGGAGCCTTCTATGGGCAAGGGAGCAAAGGCGGCATGATGTCAATCTTCCTCATGGGC
TGCTACGACCCTGGCAGCCAGAAGTGGTGCACAGTCACCAAGTGTGCAGGAGGCCATGATGATG
CCACGCTTGCCCGCCTGCAGAATGAACTAGACATGGTGAAGATCAGCAAGGACCCCAGCAAAAT
ACCCAGCTGGTTGAAGGTCAACAAGATCTACTATCCTGACTTCATCGTCCCAGACCCAAAGAAA
GCTGCCGTGTGGGAGATCACAGGGGCTGAATTCTCCAAATCGGAGGCTCATACAGCTGACGGGA
TCTCCATCCGATTCCCTCGCTGCACCCGAATCCGAGATGATAAGGACTGGAAATCTGCCACTAA
CCTTCCCCAACTCAAGGAACTGTACCAGTTGTCCAAGGAGAAGGCAGACTTCACTGTAGTGGCT
GGAGATGAGGGGAGCTCCACTACAGGGGGTAGCAGTGAAGAGAATAAGGGTCCCTCAGGGTCTG
CTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGAAGCTGAG
TAACTCCAACAGCAAAGATGGCAACATGCAGACTGCAAAGCCTTCCGCTATGAAGGTGGGGGAG
AAGCTGGCCACAAAGTCTTCTCCAGTGAAAGTAGGGGAGAAGCGGAAAGCTGCTGATGAGACGC
TGTGCCAAACAAAGGTATTGCTGGACATCTTCACTGGGGTGCGGCTTTACTTGCCACCCTCCAC
ACCAGACTTCAGCCGTCTCAGACGCTACTTTGTGGCATTCGACGGGGACCTGGTACAGGAATTT
GATATGACTTCAGCCACGCACGTGCTGGGTAGCAGGGACAAGAACCCTGCGGCCCAGCAGGTCT
CCCCAGAGTGGATTTGGGCATGTATCCGGAAACGGAGACTGGTAGCTCCCTGCTAGGTTTGCTG
TCTTCCCTCTCCCTCAGGCCATACTCTCCTTTACCATACTACTGGACTGGACTCAGGCTGGAGG
CAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCCACCAGTTCTCCACTGTCT
CTTCTGGACCAGGAATTAGTTGCTGTGGGTGCCACAGCTGAAGTCAGTTTGTCTTGCTGGTTTA
AATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAAAAGCAGCTTA
GTTACCCTTTTTATAAATAAAATATCTTGCAGTTATCTTTGTCCTTTCCCCACCTACACCCCCA
ATAATTTCCCTAGAGATTAAGGAGTAAAGGCTGGGCTATGGCAGCTCTGTCCACAAAGCCTTCT
CTCCCATCCTTGCCTGTTCCTTTGTACTTCCAGGCTCATTTTAAAGTTGTATTTAAAGGACTGC
CCTCGGAAATGCTTCTGTTTAGCGGAACTTGTATTCAGCCTGACACGCTTTGCCAGGAACAAAC
CTCATGTGAAAGAAAACAAAATGAATTTTTTTACTTTCTTCTCTGTGTTCTCCTATTACATGGT
GAGGATCCCCAGTTTGAAGGGAGGGGACTAGGGTCAGGTAGGAAAATGGGGCCTTTATGAAGAA
AGGGGAGGTTATTTGGGCCACTCCTCTGGAGGGATAGAGGGCTCCAGGAAGATCTGCATCCCCA
AAACCTGGAAACAAGACTGTTCTTTAAGAATAAAAATCCACATGGGGCTTGAGGCCAAGAACAG
CCCTTGTTGCCACCAACATGGAGACTTTGTACCATATCCCATTCTTAGTGCTCGAGTGTTCCAA
CCTGAAGTTGAAGAAGCCACCCTGGCTGCACATGCCATCAGCCATGACTGTGTATGCTCTGGTG
GTGGTGTCTTACTTCCTCATGACTGGAGGAATAATTATATGATATTGTTGAACCCCCAAGTATT
GGCTGATGAACGTGGGCATCAGAGGCCAGTAGCTTTCTTGGCCTACAAAGTAAATGGACAGTAT
ATTATGGAAGGATTTGCATCCAGCTTCCTGTTTACAATGGGAGGTTTAGGTTTCATAATGCTGG
ACCAGTCGAATGCACCAAATATCCCAAAACTCAATCGATTTTTTTTCTTCTATTCATTGGATTC
GTCTGTGTCCTACTGAGTTTTTTCATGGCTGGAGTATTCATGTGAATGAAACTGCCGGGCTATC
TGATGGGTTAGAGCGCCTTTAAGAAGAAATCAGTGGATACTGGATTTGCTCCTGTCAATGAAGT
TCTAAAGGCTGTACCAATCCTCCAATATGAAATG

hide sequence

RefSeq Acc Id:

XM_006721896 ⟹ XP_006721959

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,980,512 - 35,003,153 (+)	NCBI

Sequence:

show sequence

TGCCTCCCGCTCTAGGACCCGGATTTAAAGAGACAGGCGCTCCAACCGTCGTGGGCTGCCCGCG
GCCTGTAATGAGCAAGTTCCGAGGCCTACGCTATATGTCTTTGGCTTTCAAGATCTTCTTTCCA
CAAACCCTCCGTGCACTCAGCCGAAAAGAACTGTGCCTATTCCGAAAACATCACTGGCGTGATG
TAAGACAATTCAGCCAGTGGTCAGAAACAGATCTGCTTCATGGACATCCCCTCTTCCTGAGAAG
AAAGCCTGTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTGCCACCTACCTTGTTTTCTTG
CCAGGGTTGCATGTGGGACTCTGCAGTGGCCCCTGTGAGATGGCTGAGCAACGGTTCTGTGTGG
ACTATGCCAAGCGTGGCACAGCTGGCTGCAAAAAATGCAAGGAAAAGATTGTGAAGGGCGTATG
CCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGATATGAAAGAGTGGTAC
CACATTAAATGCATGTTTGAGAAACTAGAGCGGGCCCGGGCCACCACAAAAAAAATCGAGGACC
TCACAGAGCTGGAAGGCTGGGAAGAGCTGGAAGATAATGAGAAGGAACAGATAACCCAGCACAT
TGCAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTGTTGTCCAGGCTAAGTTG
ACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATCCCC
GGAAATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAGCCCCCTCGAGCCCCACCCC
TAAGAGAAGTCTGTCTTCAAGCAAATGTGACCCCAGGCATAAGGACTGTCTGCTACGGGAGTTT
CGAAAGTTATGCGCCATGGTGGCCGATAATCCTAGCTACAACACGAAGACCCAGATCATCCAGG
ACTTCCTTCGGAAAGGCTCAGCAGGAGATGGTTTCCACGGTGATGTGTACCTAACAGTGAAGCT
GCTGCTGCCAGGAGTCATTAAGACTGTTTACAACTTGAACGATAAGCAGATTGTGAAGCTTTTC
AGTCGCATTTTTAACTGCAACCCAGATGATATGGCACGGGACCTAGAGCAGGGTGACGTGTCAG
AGACAATCAGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCCCCCAGCTGCCAAGAGCCTCCTTAC
CATCCAGGAAGTGGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAGCAA
CAGGCCCTACAGGACATTGCCTCCAGGTGTACAGCCAATGACCTTAAATGCATCATCAGGTTGA
TCAAACATGATCTGAAGATGAACTCAGGTGCAAAACATGTGTTAGACGCCCTTGACCCCAATGC
CTATGAAGCCTTCAAAGCCTCGCGCAACCTGCAGGATGTGGTGGAGCGGGTCCTTCACAACGCG
CAGGAGGTGGAGAAGGAGCCGGGCCAGAGACGAGCTCTGAGCGTCCAGGCCTCGCTGATGACAC
CTGTGCAGCCCATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCCCAA
TGGCATGTTCTCTGAGATCAAGTACGATGGAGAGCGAGTCCAGGTGCATAAGAATGGAGACCAC
TTCAGCTACTTCAGCCGCAGTCTCAAGCCCGTCCTTCCTCACAAGGTGGCCCACTTTAAGGACT
ACATTCCCCAGGCTTTTCCTGGGGGCCACAGCATGATCTTGGATTCTGAAGTGCTTCTGATTGA
CAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGAAAGCAGCCTTCCAG
GATGCTAATGTCTGCCTGTTTGTTTTTGATTGTATCTACTTTAATGATGTCAGCTTGATGGACA
GACCTCTGTGTGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGAAATTCCAAACCGGATCAT
GTTCTCAGAAATGAAGCGAGTCACAAAAGCTTTGGACTTGGCTGACATGATAACCCGGGTGATC
CAGGAGGGATTGGAGGGGCTGGTGCTGAAGGATGTGAAGGGTACATATGAGCCTGGGAAGCGGC
ACTGGCTGAAAGTGAAGAAAGACTATTTGAACGAGGGGGCCATGGCCGACACAGCTGACCTGGT
GGTCCTTGGAGCCTTCTATGGGCAAGGGAGCAAAGGCGGCATGATGTCAATCTTCCTCATGGGC
TGCTACGACCCTGGCAGCCAGAAGTGGTGCACAGTCACCAAGTGTGCAGGAGGCCATGATGATG
CCACGCTTGCCCGCCTGCAGAATGAACTAGACATGGTGAAGATCAGCAAGGACCCCAGCAAAAT
ACCCAGCTGGTTGAAGGTCAACAAGATCTACTATCCTGACTTCATCGTCCCAGACCCAAAGAAA
GCTGCCGTGTGGGAGATCACAGGGGCTGAATTCTCCAAATCGGAGGCTCATACAGCTGACGGGA
TCTCCATCCGATTCCCTCGCTGCACCCGAATCCGAGATGATAAGGACTGGAAATCTGCCACTAA
CCTTCCCCAACTCAAGGAACTGTACCAGTTGTCCAAGGAGAAGGCAGACTTCACTGTAGTGGCT
GGAGATGAGGGGAGCTCCACTACAGGGGGTAGCAGTGAAGAGAATAAGGGTCCCTCAGGGTCTG
CTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGAAGCTGAG
TAACTCCAACAGCAAAGATGGCAACATGCAGACTGCAAAGCCTTCCGCTATGAAGGTGGGGGAG
AAGCTGGCCACAAAGTCTTCTCCAGTGAAAGTAGGGGAGAAGCGGAAAGCTGCTGATGAGACGC
TGTGCCAAACAAAGAGGCGGCCAGCCAGTGAGCAGAGAGGAAGAACTGTGCCAGCAGGCAGGAG
ATAGAACAGCCCGGCCTAGCCAGGAGAGACTGCAGGGACTCACTCAGCTGCTGGCCCCAAGTCA
AAATTTACATTAAAGGGAAAAGACCAGTCTGGGTGTGGGAATGCAGCATTGAGTTTGTGGTCAG
GGTGGAAGCAGGTCCAGCAAGCAGCGAGTCGGGGAGAGGGCACTGGCTTGGTGACTCTCCTCCC
ACCTGAGGAGCCTTTTCCCTGTTACATTTTCTTGTCAGTCTTGGGTTTGGCAACATCTCCTGAG
CAATTCTTTTTTTTTTTGAGATAAGTCTCGCTCTGTTGCCTAGGCTGGAGTGAAGTGGTGCAAT
CACAGCGCACTGCAACCTCCGCTCACTGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCGGC
TTCAGCCTCCCGAGTAGCTGGGAGTATAGGCATGTGCCACCATGCCCGGCTAATTTTTGTATTT
TTAGTAGAGACGGGATTTCACCATGTTGGTCAGGCTGGTCCCAAAGTCCTGACCTCAAGTGATC
CGCCTGCCTTGGTCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCATACCCGGCCTCTTTT
GAGCACTTTCTGATGCCAAGAACTAGGTTTAGTACTGGCTCAACTCTGGGGGAGCTGATGCCTC
AAAGGACAGATAGAGAAGTAAACATATGATTGACACCCATGTCATTGCGCCCCCACGCTCCCCA
CCGCCATCCAGGAGTAAGCATAGAAGTCTCACAGCACAAGGCCTGAACTCGGTCCCCAACAGAC
CTGTAGAAACCTTTCCCCTCTCTCTTCCCAGCCTGAAGTCCTTGAACCCATTGAGAGTAGTAAG
CAGGACTCCTGACCCCTCAGTCTAGCAGGTTGTACAGAGTAGACTGCTTGGTCTCAGGGGACAT
CACTGAGTCTGGGGGCACTGAGTCAGAGCCAGCTCCGCCTGCCCACCATGACTGGGTGGCTCTT
ATACACATGTACTCTTCCCATCTCCAGGTCCCAGATGTCGAGGCCTGTCCACTCTCCTTTTCCC
CTAGGCAGGGATGGAGGGGCGTGTCAGTCCTGTATAATTTGGAGTGACTGGAGGGGTGGGGGTA
TTGATGCATGGTATTCCAGTAAACTTCTCTGCTTGTGTCC

hide sequence

RefSeq Acc Id:

XM_017024624 ⟹ XP_016880113

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,980,802 - 35,009,743 (+)	NCBI

Sequence:

show sequence

AGGTTGCTCTGTAAATTGATCTTCTAGGAAAAGTGTTGAAACTCACTTGTTCTGACCTCCTTTT
ATGGGTCTGCCGTACTTCCACTTACCTCACCTCTGTGGTTCTTAAACTTTGGGAGTTATATAGC
CCTTTGTGAATATCACGAAAGTGATAGACCTCCTCCAAAAAACCGTGCATTTTTATCGAATGTA
CATTTTGTATACATTTTTAGAGAGCTCAGAACAGCCTCCCTCCCCCACAACCAGCGCATTCATG
GATTCCTTGTAATTTTCCCAACTACCCTGTGAGCTATATGTCTTTGGCTTTCAAGATCTTCTTT
CCACAAACCCTCCGTGCACTCAGCCGAAAAGAACTGTGCCTATTCCGAAAACATCACTGGCGTG
ATGTAAGACAATTCAGCCAGTGGTCAGAAACAGATCTGCTTCATGGACATCCCCTCTTCCTGAG
AAGAAAGCCTGTTCTATCATTCCAGGGAAGCCATCTAAGATCACGTGCCACCTACCTTGTTTTC
TTGCCAGGGTTGCATGTGGGACTCTGCAGTGGCCCCTGTGAGATGGCTGAGCAACGGTTCTGTG
TGGACTATGCCAAGCGTGGCACAGCTGGCTGCAAAAAATGCAAGGAAAAGATTGTGAAGGGCGT
ATGCCGAATTGGCAAAGTGGTGCCCAATCCCTTCTCAGAGTCTGGGGGTGATATGAAAGAGTGG
TACCACATTAAATGCATGTTTGAGAAACTAGAGCGGGCCCGGGCCACCACAAAAAAAATCGAGG
ACCTCACAGAGCTGGAAGGCTGGGAAGAGCTGGAAGATAATGAGAAGGAACAGATAACCCAGCA
CATTGCAGATCTGTCTTCTAAGGCAGCAGGTACACCAAAGAAGAAAGCTGTTGTCCAGGCTAAG
TTGACAACCACTGGCCAGGTGACTTCTCCAGTGAAAGGCGCCTCATTTGTCACCAGTACCAATC
CCCGGAAATTTTCTGGCTTTTCAGCCAAGCCCAACAACTCTGGGGAAGCCCCCTCGAGCCCCAC
CCCTAAGAGAAGTCTGTCTTCAAGCAAATGTGACCCCAGGCATAAGGACTGTCTGCTACGGGAG
TTTCGAAAGTTATGCGCCATGGTGGCCGATAATCCTAGCTACAACACGAAGACCCAGATCATCC
AGGACTTCCTTCGGAAAGGCTCAGCAGGAGATGGTTTCCACGGTGATGTGTACCTAACAGTGAA
GCTGCTGCTGCCAGGAGTCATTAAGACTGTTTACAACTTGAACGATAAGCAGATTGTGAAGCTT
TTCAGTCGCATTTTTAACTGCAACCCAGATGATATGGCACGGGACCTAGAGCAGGGTGACGTGT
CAGAGACAATCAGAGTCTTCTTTGAGCAGAGCAAGTCTTTCCCCCCAGCTGCCAAGAGCCTCCT
TACCATCCAGGAAGTGGATGAGTTCCTTCTGCGGCTGTCCAAGCTCACCAAGGAGGATGAGCAG
CAACAGGCCCTACAGGACATTGCCTCCAGGTGTACAGCCAATGACCTTAAATGCATCATCAGGT
TGATCAAACATGATCTGAAGATGAACTCAGGTGCAAAACATGTGTTAGACGCCCTTGACCCCAA
TGCCTATGAAGCCTTCAAAGCCTCGCGCAACCTGCAGGATGTGGTGGAGCGGGTCCTTCACAAC
GCGCAGGAGGTGGAGAAGGAGCCGGGCCAGAGACGAGCTCTGAGCGTCCAGGCCTCGCTGATGA
CACCTGTGCAGCCCATGTTGGCGGAGGCCTGCAAGTCCGTTGAGTATGCAATGAAGAAATGTCC
CAATGGCATGTTCTCTGAGATCAAGTACGATGGAGAGCGAGTCCAGGTGCATAAGAATGGAGAC
CACTTCAGCTACTTCAGCCGCAGTCTCAAGCCCGTCCTTCCTCACAAGGTGGCCCACTTTAAGG
ACTACATTCCCCAGGCTTTTCCTGGGGGCCACAGCATGATCTTGGATTCTGAAGTGCTTCTGAT
TGACAACAAGACAGGCAAACCACTGCCCTTTGGGACTCTGGGAGTACACAAGAAAGCAGCCTTC
CAGGATGCTAATGTCTGCCTGTTTGTTTTTGATTGTATCTACTTTAATGATGTCAGCTTGATGG
ACAGACCTCTGTGTGAGCGGCGGAAGTTTCTTCATGACAACATGGTTGAAATTCCAAACCGGAT
CATGTTCTCAGAAATGAAGCGAGTCACAAAAGCTTTGGACTTGGCTGACATGATAACCCGGGTG
ATCCAGGAGGGATTGGAGGGGCTGGTGCTGAAGGATGTGAAGGGTACATATGAGCCTGGGAAGC
GGCACTGGCTGAAAGTGAAGAAAGACTATTTGAACGAGGGGGCCATGGCCGACACAGCTGACCT
GGTGGTCCTTGGAGCCTTCTATGGGCAAGGGAGCAAAGGCGGCATGATGTCAATCTTCCTCATG
GGCTGCTACGACCCTGGCAGCCAGAAGTGGTGCACAGTCACCAAGTGTGCAGGAGGCCATGATG
ATGCCACGCTTGCCCGCCTGCAGAATGAACTAGACATGGTGAAGATCAGCAAGGACCCCAGCAA
AATACCCAGCTGGTTGAAGGTCAACAAGATCTACTATCCTGACTTCATCGTCCCAGACCCAAAG
AAAGCTGCCGTGTGGGAGATCACAGGGGCTGAATTCTCCAAATCGGAGGCTCATACAGCTGACG
GGATCTCCATCCGATTCCCTCGCTGCACCCGAATCCGAGATGATAAGGACTGGAAATCTGCCAC
TAACCTTCCCCAACTCAAGGAACTGTACCAGTTGTCCAAGGAGAAGGCAGACTTCACTGTAGTG
GCTGGAGATGAGGGGAGCTCCACTACAGGGGGTAGCAGTGAAGAGAATAAGGGTCCCTCAGGGT
CTGCTGTGTCCCGCAAGGCCCCCAGCAAGCCCTCAGCCAGTACCAAGAAAGCAGAAGGGAAGCT
GAGTAACTCCAACAGCAAAGATGGCAACATGCAGACTGCAAAGCCTTCCGCTATGAAGGTGGGG
GAGAAGCTGGCCACAAAGTCTTCTCCAGTGAAAGTAGGGGAGAAGCGGAAAGCTGCTGATGAGA
CGCTGTGCCAAACAAAGGTATTGCTGGACATCTTCACTGGGGTGCGGCTTTACTTGCCACCCTC
CACACCAGACTTCAGCCGTCTCAGACGCTACTTTGTGGCATTCGACGGGGACCTGGTACAGGAA
TTTGATATGACTTCAGCCACGCACGTGCTGGGTAGCAGGGACAAGAACCCTGCGGCCCAGCAGG
TCTCCCCAGAGTGGATTTGGGCATGTATCCGGAAACGGAGACTGGTAGCTCCCTGCTAGGTTTG
CTGTCTTCCCTCTCCCTCAGGCCATACTCTCCTTTACCATACTACTGGACTGGACTCAGGCTGG
AGGCAGATAGACACAGTATAGGGGGAATGGGCTTGCTTCTCCCAAACCCACCAGTTCTCCACTG
TCTCTTCTGGACCAGGAATTAGTTGCTGTGGGTGCCACAGCTGAAGTCAGTTTGTCTTGCTGGT
TTAAATAGATCTTTCAGAGCTGGGTGCTGGGTTTGCCATCTTTTTGTTTTCTTTGAAAAGCAGC
TTAGTTACCCTTTTTATAAATAAAATATCTTGCAGTTATCTTTGTCCTTTCCCCACCTACACCC
CCAATAATTTCCCTAGAGATTAAGGAGTAAAGGCTGGGCTATGGCAGCTCTGTCCACAAAGCCT
TCTCTCCCATCCTTGCCTGTTCCTTTGTACTTCCAGGCTCATTTTAAAGTTGTATTTAAAGGAC
TGCCCTCGGAAATGCTTCTGTTTAGCGGAACTTGTATTCAGCCTGACACGCTTTGCCAGGAACA
AACCTCATGTGAAAGAAAACAAAATGAATTTTTTTACTTTCTTCTCTGTGTTCTCCTATTACAT
GGTGAGGATCCCCAGTTTGAAGGGAGGGGACTAGGGTCAGGTAGGAAAATGGGGCCTTTATGAA
GAAAGGGGAGGTTATTTGGGCCACTCCTCTGGAGGGATAGAGGGCTCCAGGAAGATCTGCATCC
CCAAAACCTGGAAACAAGACTGTTCTTTAAGAATAAAAATCCACATGGGGCTTGAGGCCAAGAA
CAGCCCTTGTTGCCACCAACATGGAGACTTTGTACCATATCCCATTCTTAGTGCTCGAGTGTTC
CAACCTGAAGTTGAAGAAGCCACCCTGGCTGCACATGCCATCAGCCATGACTGTGTATGCTCTG
GTGGTGGTGTCTTACTTCCTCATGACTGGAGGAATAATTATATGATATTGTTGAACCCCCAAGT
ATTGGCTGATGAACGTGGGCATCAGAGGCCAGTAGCTTTCTTGGCCTACAAAGTAAATGGACAG
TATATTATGGAAGGATTTGCATCCAGCTTCCTGTTTACAATGGGAGGTTTAGGTTTCATAATGC
TGGACCAGTCGAATGCACCAAATATCCCAAAACTCAATCGATTTTTTTTCTTCTATTCATTGGA
TTCGTCTGTGTCCTACTGAGTTTTTTCATGGCTGGAGTATTCATGTGAATGAAACTGCCGGGCT
ATCTGATGGGTTAGAGCGCCTTTAAGAAGAAATCAGTGGATACTGGATTTGCTCCTGTCAATGA
AGTTCTAAAGGCTGTACCAATCCTCCAATATGAAATG

hide sequence

RefSeq Acc Id:

XM_047435968 ⟹ XP_047291924

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,980,512 - 35,010,872 (+)	NCBI

RefSeq Acc Id:

XM_047435969 ⟹ XP_047291925

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,980,512 - 35,010,872 (+)	NCBI

RefSeq Acc Id:

XM_047435970 ⟹ XP_047291926

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,981,468 - 35,010,872 (+)	NCBI

RefSeq Acc Id:

XM_047435971 ⟹ XP_047291927

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,980,512 - 35,010,872 (+)	NCBI

RefSeq Acc Id:

XM_047435972 ⟹ XP_047291928

RefSeq Status:

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,980,512 - 35,009,743 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_002302	(Get FASTA)	NCBI Sequence Viewer
	NP_039269	(Get FASTA)	NCBI Sequence Viewer
	XP_005258027	(Get FASTA)	NCBI Sequence Viewer
	XP_006721959	(Get FASTA)	NCBI Sequence Viewer
	XP_016880113	(Get FASTA)	NCBI Sequence Viewer
	XP_047291924	(Get FASTA)	NCBI Sequence Viewer
	XP_047291925	(Get FASTA)	NCBI Sequence Viewer
	XP_047291926	(Get FASTA)	NCBI Sequence Viewer
	XP_047291927	(Get FASTA)	NCBI Sequence Viewer
	XP_047291928	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA85022	(Get FASTA)	NCBI Sequence Viewer
	AAH09026	(Get FASTA)	NCBI Sequence Viewer
	AAH68005	(Get FASTA)	NCBI Sequence Viewer
	AAL91592	(Get FASTA)	NCBI Sequence Viewer
	ADP89974	(Get FASTA)	NCBI Sequence Viewer
	ADP89975	(Get FASTA)	NCBI Sequence Viewer
	ADP89976	(Get FASTA)	NCBI Sequence Viewer
	ADP89977	(Get FASTA)	NCBI Sequence Viewer
	ADP89978	(Get FASTA)	NCBI Sequence Viewer
	ADP89979	(Get FASTA)	NCBI Sequence Viewer
	ADP89980	(Get FASTA)	NCBI Sequence Viewer
	ADP89981	(Get FASTA)	NCBI Sequence Viewer
	ADP89982	(Get FASTA)	NCBI Sequence Viewer
	ADP89983	(Get FASTA)	NCBI Sequence Viewer
	ADP89984	(Get FASTA)	NCBI Sequence Viewer
	ADP89985	(Get FASTA)	NCBI Sequence Viewer
	ADP89986	(Get FASTA)	NCBI Sequence Viewer
	ADP89987	(Get FASTA)	NCBI Sequence Viewer
	ADP89988	(Get FASTA)	NCBI Sequence Viewer
	ADP89989	(Get FASTA)	NCBI Sequence Viewer
	ADP89990	(Get FASTA)	NCBI Sequence Viewer
	ADP89991	(Get FASTA)	NCBI Sequence Viewer
	ADP89992	(Get FASTA)	NCBI Sequence Viewer
	ADP89993	(Get FASTA)	NCBI Sequence Viewer
	ADP89994	(Get FASTA)	NCBI Sequence Viewer
	ADP89995	(Get FASTA)	NCBI Sequence Viewer
	ADP89996	(Get FASTA)	NCBI Sequence Viewer
	ADP89997	(Get FASTA)	NCBI Sequence Viewer
	ADP89998	(Get FASTA)	NCBI Sequence Viewer
	ADP89999	(Get FASTA)	NCBI Sequence Viewer
	ADP90000	(Get FASTA)	NCBI Sequence Viewer
	ADP90001	(Get FASTA)	NCBI Sequence Viewer
	ADP90002	(Get FASTA)	NCBI Sequence Viewer
	ADP90003	(Get FASTA)	NCBI Sequence Viewer
	ADP90004	(Get FASTA)	NCBI Sequence Viewer
	ADP90005	(Get FASTA)	NCBI Sequence Viewer
	ADP90006	(Get FASTA)	NCBI Sequence Viewer
	ADP90007	(Get FASTA)	NCBI Sequence Viewer
	ADP90008	(Get FASTA)	NCBI Sequence Viewer
	ADP90009	(Get FASTA)	NCBI Sequence Viewer
	ADP90010	(Get FASTA)	NCBI Sequence Viewer
	ADP90011	(Get FASTA)	NCBI Sequence Viewer
	ADP90012	(Get FASTA)	NCBI Sequence Viewer
	ADP90013	(Get FASTA)	NCBI Sequence Viewer
	ADP90014	(Get FASTA)	NCBI Sequence Viewer
	ADP90015	(Get FASTA)	NCBI Sequence Viewer
	ADP90016	(Get FASTA)	NCBI Sequence Viewer
	ADP90017	(Get FASTA)	NCBI Sequence Viewer
	ADP90018	(Get FASTA)	NCBI Sequence Viewer
	ADP90019	(Get FASTA)	NCBI Sequence Viewer
	ADP90020	(Get FASTA)	NCBI Sequence Viewer
	ADP90021	(Get FASTA)	NCBI Sequence Viewer
	ADP90022	(Get FASTA)	NCBI Sequence Viewer
	ADP90023	(Get FASTA)	NCBI Sequence Viewer
	ADP90024	(Get FASTA)	NCBI Sequence Viewer
	ADP90025	(Get FASTA)	NCBI Sequence Viewer
	ADP90026	(Get FASTA)	NCBI Sequence Viewer
	ADP90027	(Get FASTA)	NCBI Sequence Viewer
	ADP90028	(Get FASTA)	NCBI Sequence Viewer
	ADP90029	(Get FASTA)	NCBI Sequence Viewer
	ADP90030	(Get FASTA)	NCBI Sequence Viewer
	ADP90031	(Get FASTA)	NCBI Sequence Viewer
	ADP90032	(Get FASTA)	NCBI Sequence Viewer
	ADP90033	(Get FASTA)	NCBI Sequence Viewer
	ADP90034	(Get FASTA)	NCBI Sequence Viewer
	ADP90035	(Get FASTA)	NCBI Sequence Viewer
	ADP90036	(Get FASTA)	NCBI Sequence Viewer
	ADP90037	(Get FASTA)	NCBI Sequence Viewer
	ADP90038	(Get FASTA)	NCBI Sequence Viewer
	ADP90039	(Get FASTA)	NCBI Sequence Viewer
	ADP90040	(Get FASTA)	NCBI Sequence Viewer
	ADP90041	(Get FASTA)	NCBI Sequence Viewer
	ADP90042	(Get FASTA)	NCBI Sequence Viewer
	ADP90043	(Get FASTA)	NCBI Sequence Viewer
	ADP90044	(Get FASTA)	NCBI Sequence Viewer
	ADP90045	(Get FASTA)	NCBI Sequence Viewer
	ADP90046	(Get FASTA)	NCBI Sequence Viewer
	ADP90047	(Get FASTA)	NCBI Sequence Viewer
	ADP90048	(Get FASTA)	NCBI Sequence Viewer
	ADP90049	(Get FASTA)	NCBI Sequence Viewer
	ADP90050	(Get FASTA)	NCBI Sequence Viewer
	ADP90051	(Get FASTA)	NCBI Sequence Viewer
	ADP90052	(Get FASTA)	NCBI Sequence Viewer
	ADP90053	(Get FASTA)	NCBI Sequence Viewer
	BAH13269	(Get FASTA)	NCBI Sequence Viewer
	BAH59593	(Get FASTA)	NCBI Sequence Viewer
	CAA59230	(Get FASTA)	NCBI Sequence Viewer
	EAW80197	(Get FASTA)	NCBI Sequence Viewer
	EAW80198	(Get FASTA)	NCBI Sequence Viewer
	EAW80199	(Get FASTA)	NCBI Sequence Viewer
	P49916	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_039269 ⟸ NM_013975
- Peptide Label:	isoform alpha precursor
- UniProtKB:	P49916 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSLAFKIFFPQTLRALSRKELCLFRKHHWRDVRQFSQWSETDLLHGHPLFLRRKPVLSFQGSHL RSRATYLVFLPGLHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFS ESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQHIADLSSKAAGTP KKKAVVQAKLTTTGQVTSPVKGASFVTSTNPRKFSGFSAKPNNSGEAPSSPTPKRSLSSSKCDP RHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFHGDVYLTVKLLLPGVIKTVYN LNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSKSFPPAAKSLLTIQEVDEFLLRL SKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLDALDPNAYEAFKASRNLQ DVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKSVEYAMKKCPNGMFSEIKYDGE RVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGT LGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKAL DLADMITRVIQEGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSK GGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNELDMVKISKDPSKIPSWLKVNKIYY PDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS KEKADFTVVAGDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGKLSNSNSKDGNMQT AKPSAMKVGEKLATKSSPVKVGEKRKAADETLCQTKVLLDIFTGVRLYLPPSTPDFSRLRRYFV AFDGDLVQEFDMTSATHVLGSRDKNPAAQQVSPEWIWACIRKRRLVAPC hide sequence

RefSeq Acc Id:	NP_002302 ⟸ NM_002311
- Peptide Label:	isoform beta precursor
- UniProtKB:	P49916 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSLAFKIFFPQTLRALSRKELCLFRKHHWRDVRQFSQWSETDLLHGHPLFLRRKPVLSFQGSHL RSRATYLVFLPGLHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFS ESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQHIADLSSKAAGTP KKKAVVQAKLTTTGQVTSPVKGASFVTSTNPRKFSGFSAKPNNSGEAPSSPTPKRSLSSSKCDP RHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFHGDVYLTVKLLLPGVIKTVYN LNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSKSFPPAAKSLLTIQEVDEFLLRL SKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLDALDPNAYEAFKASRNLQ DVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKSVEYAMKKCPNGMFSEIKYDGE RVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGT LGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKAL DLADMITRVIQEGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSK GGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNELDMVKISKDPSKIPSWLKVNKIYY PDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS KEKADFTVVAGDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGKLSNSNSKDGNMQT AKPSAMKVGEKLATKSSPVKVGEKRKAADETLCQTKRRPASEQRGRTVPAGRR hide sequence

RefSeq Acc Id:

XP_005258027 ⟸ XM_005257970

- Peptide Label:

isoform X3

- Sequence:

show sequence

MSKFRGLRYMSLAFKIFFPQTLRALSRKELCLFRKHHWRDVRQFSQWSETDLLHGHPLFLRRKP
VLSFQGSHLRSRATYLVFLPGLHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQHIAD
LSSKAAGTPKKKAVVQAKLTTTGQVTSPVKGASFVTSTNPRKFSGFSAKPNNSGEAPSSPTPKR
SLSSSKCDPRHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFHGDVYLTVKLLL
PGVIKTVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSKSFPPAAKSLLTIQ
EVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLDALDPNAYE
AFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKSVEYAMKKCPNGM
FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNK
TGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFS
EMKRVTKALDLADMITRVIQEGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVL
GAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNELDMVKISKDPSKIPS
WLKVNKIYYPDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLP
QLKELYQLSKEKADFTVVAGDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGKLSNS
NSKDGNMQTAKPSAMKVGEKLATKSSPVKVGEKRKAADETLCQTKVLLDIFTGVRLYLPPSTPD
FSRLRRYFVAFDGDLVQEFDMTSATHVLGSRDKNPAAQQVSPEWIWACIRKRRLVAPC

hide sequence

RefSeq Acc Id:

XP_006721959 ⟸ XM_006721896

- Peptide Label:

isoform X6

- Sequence:

show sequence

MSKFRGLRYMSLAFKIFFPQTLRALSRKELCLFRKHHWRDVRQFSQWSETDLLHGHPLFLRRKP
VLSFQGSHLRSRATYLVFLPGLHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQHIAD
LSSKAAGTPKKKAVVQAKLTTTGQVTSPVKGASFVTSTNPRKFSGFSAKPNNSGEAPSSPTPKR
SLSSSKCDPRHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFHGDVYLTVKLLL
PGVIKTVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSKSFPPAAKSLLTIQ
EVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLDALDPNAYE
AFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKSVEYAMKKCPNGM
FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNK
TGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFS
EMKRVTKALDLADMITRVIQEGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVL
GAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNELDMVKISKDPSKIPS
WLKVNKIYYPDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLP
QLKELYQLSKEKADFTVVAGDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGKLSNS
NSKDGNMQTAKPSAMKVGEKLATKSSPVKVGEKRKAADETLCQTKRRPASEQRGRTVPAGRR

hide sequence

RefSeq Acc Id:	XP_016880113 ⟸ XM_017024624
- Peptide Label:	isoform X4
- UniProtKB:	P49916 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MSLAFKIFFPQTLRALSRKELCLFRKHHWRDVRQFSQWSETDLLHGHPLFLRRKPVLSFQGSHL RSRATYLVFLPGLHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIGKVVPNPFS ESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQHIADLSSKAAGTP KKKAVVQAKLTTTGQVTSPVKGASFVTSTNPRKFSGFSAKPNNSGEAPSSPTPKRSLSSSKCDP RHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFHGDVYLTVKLLLPGVIKTVYN LNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQSKSFPPAAKSLLTIQEVDEFLLRL SKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLDALDPNAYEAFKASRNLQ DVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKSVEYAMKKCPNGMFSEIKYDGE RVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGT LGVHKKAAFQDANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKAL DLADMITRVIQEGLEGLVLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSK GGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNELDMVKISKDPSKIPSWLKVNKIYY PDFIVPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS KEKADFTVVAGDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGKLSNSNSKDGNMQT AKPSAMKVGEKLATKSSPVKVGEKRKAADETLCQTKVLLDIFTGVRLYLPPSTPDFSRLRRYFV AFDGDLVQEFDMTSATHVLGSRDKNPAAQQVSPEWIWACIRKRRLVAPC hide sequence

RefSeq Acc Id:

ENSP00000467757 ⟸ ENST00000585740

RefSeq Acc Id:

ENSP00000468479 ⟸ ENST00000585941

RefSeq Acc Id:

ENSP00000465288 ⟸ ENST00000585370

RefSeq Acc Id:

ENSP00000466278 ⟸ ENST00000588109

RefSeq Acc Id:

ENSP00000367787 ⟸ ENST00000378526

RefSeq Acc Id:

ENSP00000262327 ⟸ ENST00000262327

RefSeq Acc Id:

ENSP00000467063 ⟸ ENST00000592690

RefSeq Acc Id:	XP_047291925 ⟸ XM_047435969
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_047291924 ⟸ XM_047435968
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_047291927 ⟸ XM_047435971
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_047291928 ⟸ XM_047435972
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_047291926 ⟸ XM_047435970
- Peptide Label:	isoform X2

Protein Domains

BRCT DNA_ligase_A_N PARP-type

Protein Structures

Name	Modeller	Protein Id	AA Range	Protein Structure	Video
AF-P49916-F1-model_v2	AlphaFold	P49916	1-1009	view protein structure

Promoters

RGD ID:

6794271

Promoter ID:

HG_KWN:25763

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

NM_002311, NM_013975, UC002HII.2, UC010CTH.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	17	30,330,971 - 30,332,112 (+)	MPROMDB

RGD ID:

7234597

Promoter ID:

EPDNEW_H23044

Type:

initiation region

Name:

LIG3_1

Description:

DNA ligase 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	34,980,512 - 34,980,572	EPDNEW

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
NM_013975.4(LIG3):c.1440T>C (p.Pro480=)	single nucleotide variant	Cardiac arrhythmia [RCV001841537]	Chr17:34992677 [GRCh38] Chr17:33319696 [GRCh37] Chr17:17q12	likely benign
NM_013975.3(LIG3):c.791G>A (p.Arg264Gln)	single nucleotide variant	Malignant melanoma [RCV000063185]	Chr17:34989565 [GRCh38] Chr17:33316584 [GRCh37] Chr17:30340697 [NCBI36] Chr17:17q12	not provided
NM_013975.3(LIG3):c.1271C>G (p.Ser424Ter)	single nucleotide variant	Malignant melanoma [RCV000063186]	Chr17:34992020 [GRCh38] Chr17:33319039 [GRCh37] Chr17:30343152 [NCBI36] Chr17:17q12	not provided
NM_013975.3(LIG3):c.1582C>A (p.Arg528Ser)	single nucleotide variant	Malignant melanoma [RCV000063187]	Chr17:34994402 [GRCh38] Chr17:33321421 [GRCh37] Chr17:30345534 [NCBI36] Chr17:17q12	not provided
NM_013975.4(LIG3):c.3008G>A (p.Arg1003Gln)	single nucleotide variant	not provided [RCV000588199]	Chr17:35004484 [GRCh38] Chr17:33331503 [GRCh37] Chr17:17q12	likely benign
NM_013975.4(LIG3):c.2472A>G (p.Gln824=)	single nucleotide variant	not provided [RCV000588282]	Chr17:35001397 [GRCh38] Chr17:33328416 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.67C>T (p.Leu23=)	single nucleotide variant	not provided [RCV000586629]	Chr17:34983072 [GRCh38] Chr17:33310091 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.1835A>T (p.Glu612Val)	single nucleotide variant	not provided [RCV000587168]	Chr17:34997749 [GRCh38] Chr17:33324768 [GRCh37] Chr17:17q12	likely benign
NM_013975.4(LIG3):c.2701G>A (p.Ala901Thr)	single nucleotide variant	not provided [RCV000589063]	Chr17:35002694 [GRCh38] Chr17:33329713 [GRCh37] Chr17:17q12	likely benign
NM_013975.4(LIG3):c.1208+3G>T	single nucleotide variant	not provided [RCV000589342]	Chr17:34991840 [GRCh38] Chr17:33318859 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.2211G>A (p.Thr737=)	single nucleotide variant	not specified [RCV000589228]	Chr17:34999404 [GRCh38] Chr17:33326423 [GRCh37] Chr17:17q12	likely benign\|uncertain significance
NM_013975.4(LIG3):c.3023C>T (p.Pro1008Leu)	single nucleotide variant	not provided [RCV000590178]	Chr17:35004499 [GRCh38] Chr17:33331518 [GRCh37] Chr17:17q12	uncertain significance
NM_013975.4(LIG3):c.1690A>C (p.Ile564Leu)	single nucleotide variant	not provided [RCV000590747]	Chr17:34996142 [GRCh38] Chr17:33323161 [GRCh37] Chr17:17q12	uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)	copy number gain	See cases [RCV000511439]	Chr17:526..81041938 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
NM_013975.4(LIG3):c.2367C>T (p.Phe789=)	single nucleotide variant	not provided [RCV000586314]	Chr17:35001292 [GRCh38] Chr17:33328311 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.2961G>A (p.Ala987=)	single nucleotide variant	not provided [RCV000586190]	Chr17:35004437 [GRCh38] Chr17:33331456 [GRCh37] Chr17:17q12	benign
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3	copy number gain	See cases [RCV000512441]	Chr17:526..81041938 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17q12(chr17:32654402-33353332)x3	copy number gain	not provided [RCV000683919]	Chr17:32654402..33353332 [GRCh37] Chr17:17q12	uncertain significance
GRCh37/hg19 17q12(chr17:32351496-34455576)x1	copy number loss	not provided [RCV000683918]	Chr17:32351496..34455576 [GRCh37] Chr17:17q12	uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3	copy number gain	not provided [RCV000739324]	Chr17:8547..81060040 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3	copy number gain	not provided [RCV000739320]	Chr17:7214..81058310 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3	copy number gain	not provided [RCV000739325]	Chr17:12344..81057996 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17q12(chr17:33073917-33863479)x1	copy number loss	not provided [RCV001006894]	Chr17:33073917..33863479 [GRCh37] Chr17:17q12	uncertain significance
NM_013975.4(LIG3):c.1028G>A (p.Arg343Gln)	single nucleotide variant	not specified [RCV001280665]	Chr17:34991101 [GRCh38] Chr17:33318120 [GRCh37] Chr17:17q12	likely benign
NM_013975.4(LIG3):c.2200G>C (p.Asp734His)	single nucleotide variant	not specified [RCV000780385]	Chr17:34999393 [GRCh38] Chr17:33326412 [GRCh37] Chr17:17q12	uncertain significance
NM_013975.4(LIG3):c.471C>A (p.Ile157=)	single nucleotide variant	not provided [RCV000886034]\|not specified [RCV000780386]	Chr17:34983476 [GRCh38] Chr17:33310495 [GRCh37] Chr17:17q12	benign\|likely benign
Single allele	deletion	Neurodevelopmental disorder [RCV000787392]	Chr17:31889285..33557612 [GRCh37] Chr17:17q12	uncertain significance
NM_013975.4(LIG3):c.452G>A (p.Arg151Gln)	single nucleotide variant	not specified [RCV001201186]	Chr17:34983457 [GRCh38] Chr17:33310476 [GRCh37] Chr17:17q12	likely benign
NM_013975.4(LIG3):c.1332G>A (p.Ser444=)	single nucleotide variant	not specified [RCV001193984]	Chr17:34992569 [GRCh38] Chr17:33319588 [GRCh37] Chr17:17q12	benign
GRCh37/hg19 17p11.2-q21.2(chr17:21690653-38772647)x3	copy number gain	not provided [RCV000846852]	Chr17:21690653..38772647 [GRCh37] Chr17:17p11.2-q21.2	pathogenic
NM_013975.4(LIG3):c.1193A>G (p.Gln398Arg)	single nucleotide variant	not specified [RCV001175431]	Chr17:34991822 [GRCh38] Chr17:33318841 [GRCh37] Chr17:17q12	uncertain significance
NM_013975.4(LIG3):c.2825G>A (p.Arg942Gln)	single nucleotide variant	not specified [RCV001193981]	Chr17:35004301 [GRCh38] Chr17:33331320 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.382T>G (p.Ser128Ala)	single nucleotide variant	not specified [RCV001553678]	Chr17:34983387 [GRCh38] Chr17:33310406 [GRCh37] Chr17:17q12	uncertain significance
NM_013975.4(LIG3):c.670C>T (p.Arg224Trp)	single nucleotide variant	not provided [RCV000963510]\|not specified [RCV001779095]	Chr17:34986110 [GRCh38] Chr17:33313129 [GRCh37] Chr17:17q12	benign\|likely benign
NM_013975.4(LIG3):c.1383G>A (p.Val461=)	single nucleotide variant	not provided [RCV000887505]	Chr17:34992620 [GRCh38] Chr17:33319639 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.2660C>T (p.Ser887Phe)	single nucleotide variant	not specified [RCV001193982]	Chr17:35002090 [GRCh38] Chr17:33329109 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.2796+6G>A	single nucleotide variant	not provided [RCV000890371]	Chr17:35002795 [GRCh38] Chr17:33329814 [GRCh37] Chr17:17q12	likely benign
NM_013975.4(LIG3):c.1555A>G (p.Asn519Asp)	single nucleotide variant	not specified [RCV001193983]	Chr17:34994375 [GRCh38] Chr17:33321394 [GRCh37] Chr17:17q12	uncertain significance
NM_013975.4(LIG3):c.1990-17_1990-14del	deletion	not specified [RCV001201229]	Chr17:34998586..34998589 [GRCh38] Chr17:33325605..33325608 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.2331+19G>A	single nucleotide variant	not specified [RCV001255561]	Chr17:34999875 [GRCh38] Chr17:33326894 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.2712G>C (p.Val904=)	single nucleotide variant	not specified [RCV001251359]	Chr17:35002705 [GRCh38] Chr17:33329724 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.2316C>T (p.Ile772=)	single nucleotide variant	not specified [RCV001255463]	Chr17:34999841 [GRCh38] Chr17:33326860 [GRCh37] Chr17:17q12	benign
NM_013975.4(LIG3):c.722C>T (p.Ser241Leu)	single nucleotide variant	not specified [RCV001269250]	Chr17:34989496 [GRCh38] Chr17:33316515 [GRCh37] Chr17:17q12	likely benign
NM_013975.4(LIG3):c.446G>A (p.Arg149Gln)	single nucleotide variant	not specified [RCV001582381]	Chr17:34983451 [GRCh38] Chr17:33310470 [GRCh37] Chr17:17q12	uncertain significance
GRCh37/hg19 17q12(chr17:33312303-33365515)x1	copy number loss	not provided [RCV001827825]	Chr17:33312303..33365515 [GRCh37] Chr17:17q12	uncertain significance
NM_013975.4(LIG3):c.1611G>C (p.Lys537Asn)	single nucleotide variant	Mitochondrial DNA depletion syndrome 20 (MNGIE type) [RCV001847480]	Chr17:34994431 [GRCh38] Chr17:33321450 [GRCh37] Chr17:17q12	pathogenic
NM_013975.4(LIG3):c.799C>T (p.Arg267Ter)	single nucleotide variant	Mitochondrial DNA depletion syndrome 20 (MNGIE type) [RCV001847483]	Chr17:34989573 [GRCh38] Chr17:33316592 [GRCh37] Chr17:17q12	pathogenic
NM_013975.4(LIG3):c.1826C>T (p.Pro609Leu)	single nucleotide variant	Mitochondrial DNA depletion syndrome 20 (MNGIE type) [RCV001847484]	Chr17:34997740 [GRCh38] Chr17:33324759 [GRCh37] Chr17:17q12	pathogenic
NM_013975.4(LIG3):c.2796+20C>T	single nucleotide variant	not specified [RCV001825076]	Chr17:35002809 [GRCh38] Chr17:33329828 [GRCh37] Chr17:17q12	uncertain significance
NM_013975.4(LIG3):c.2890G>C (p.Gly964Arg)	single nucleotide variant	Mitochondrial DNA depletion syndrome 20 (MNGIE type) [RCV001847481]	Chr17:35004366 [GRCh38] Chr17:33331385 [GRCh37] Chr17:17q12	pathogenic
NM_013975.4(LIG3):c.2431C>T (p.Arg811Ter)	single nucleotide variant	Mitochondrial DNA depletion syndrome 20 (MNGIE type) [RCV001847485]	Chr17:35001356 [GRCh38] Chr17:33328375 [GRCh37] Chr17:17q12	pathogenic
NM_013975.4(LIG3):c.86G>A (p.Trp29Ter)	single nucleotide variant	Mitochondrial DNA depletion syndrome 20 (MNGIE type) [RCV001847487]	Chr17:34983091 [GRCh38] Chr17:33310110 [GRCh37] Chr17:17q12	pathogenic
NM_013975.4(LIG3):c.1611+209G>A	single nucleotide variant	Mitochondrial DNA depletion syndrome 20 (MNGIE type) [RCV001847486]	Chr17:34994640 [GRCh38] Chr17:33321659 [GRCh37] Chr17:17q12	pathogenic
NM_013975.4(LIG3):c.2996G>A (p.Cys999Tyr)	single nucleotide variant	Mitochondrial DNA depletion syndrome 20 (MNGIE type) [RCV001847482]	Chr17:35004472 [GRCh38] Chr17:33331491 [GRCh37] Chr17:17q12	pathogenic
NM_013975.4(LIG3):c.2426G>A (p.Arg809Gln)	single nucleotide variant	not provided [RCV001935265]	Chr17:35001351 [GRCh38] Chr17:33328370 [GRCh37] Chr17:17q12	uncertain significance
NM_013975.4(LIG3):c.1041+11C>T	single nucleotide variant	not specified [RCV002223062]	Chr17:34991125 [GRCh38] Chr17:33318144 [GRCh37] Chr17:17q12	benign

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:6600	AgrOrtholog
COSMIC	LIG3	COSMIC
Ensembl Genes	ENSG00000005156	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSP00000262327	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSP00000367787	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSP00000465288	UniProtKB/TrEMBL
	ENSP00000466278	UniProtKB/TrEMBL
	ENSP00000467063	UniProtKB/TrEMBL
	ENSP00000467757	UniProtKB/TrEMBL
	ENSP00000468479	UniProtKB/TrEMBL
Ensembl Transcript	ENST00000262327	ENTREZGENE, UniProtKB/Swiss-Prot
	ENST00000378526	ENTREZGENE, UniProtKB/Swiss-Prot
	ENST00000585370	UniProtKB/TrEMBL
	ENST00000585740	UniProtKB/TrEMBL
	ENST00000585941	UniProtKB/TrEMBL
	ENST00000588109	UniProtKB/TrEMBL
	ENST00000592690	UniProtKB/TrEMBL
Gene3D-CATH	1.10.3260.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.1740.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.40.50.10190	UniProtKB/Swiss-Prot
GTEx	ENSG00000005156	GTEx
HGNC ID	HGNC:6600	ENTREZGENE
Human Proteome Map	LIG3	Human Proteome Map
InterPro	BRCT_dom	UniProtKB/Swiss-Prot
	BRCT_dom_sf	UniProtKB/Swiss-Prot
	DNA_ligase_ATP-dep	UniProtKB/Swiss-Prot
	DNA_ligase_ATP-dep_C	UniProtKB/Swiss-Prot
	DNA_ligase_ATP-dep_cent	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DNA_ligase_ATP-dep_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DNA_ligase_ATP-dep_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DNA_ligase_N_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LIG3_BRCT	UniProtKB/Swiss-Prot
	NA-bd_OB-fold	UniProtKB/Swiss-Prot
	Znf_PARP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Znf_PARP_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	hsa:3980	UniProtKB/Swiss-Prot
NCBI Gene	3980	ENTREZGENE
OMIM	600940	OMIM
	619780	OMIM
Pfam	DNA_ligase_A_C	UniProtKB/Swiss-Prot
	DNA_ligase_A_M	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DNA_ligase_A_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	LIG3_BRCT	UniProtKB/Swiss-Prot
	zf-PARP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB	PA30374	PharmGKB
PROSITE	BRCT	UniProtKB/Swiss-Prot
	DNA_LIGASE_A1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DNA_LIGASE_A2	UniProtKB/Swiss-Prot
	DNA_LIGASE_A3	UniProtKB/Swiss-Prot
	PARP_ZN_FINGER_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PARP_ZN_FINGER_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	BRCT	UniProtKB/Swiss-Prot
	zf-PARP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF117018	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF50249	UniProtKB/Swiss-Prot
	SSF52113	UniProtKB/Swiss-Prot
TIGRFAMs	dnl1	UniProtKB/Swiss-Prot
UniProt	C4B7Q3_HUMAN	UniProtKB/TrEMBL
	DNLI3_HUMAN	UniProtKB/Swiss-Prot
	K7EJR4_HUMAN	UniProtKB/TrEMBL
	K7ELY6_HUMAN	UniProtKB/TrEMBL
	K7ENR9_HUMAN	UniProtKB/TrEMBL
	K7EQB6_HUMAN	UniProtKB/TrEMBL
	K7ERZ5_HUMAN	UniProtKB/TrEMBL
	P49916	ENTREZGENE
UniProt Secondary	E5KLB5	UniProtKB/Swiss-Prot
	E5KLB6	UniProtKB/Swiss-Prot
	Q16714	UniProtKB/Swiss-Prot
	Q6NVK3	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-05-03	LIG3	DNA ligase 3	LIG3	ligase III, DNA, ATP-dependent	Symbol and/or name change	5135510	APPROVED
2016-03-18	LIG3	ligase III, DNA, ATP-dependent	LIG2	ligase II, DNA, ATP-dependent	Data Merged	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)