YAP1 (Yes1 associated transcriptional regulator) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: YAP1 (Yes1 associated transcriptional regulator) Homo sapiens
Analyze
Symbol: YAP1
Name: Yes1 associated transcriptional regulator
RGD ID: 1314421
HGNC Page HGNC:16262
Description: Enables DNA-binding transcription factor binding activity; transcription cis-regulatory region binding activity; and transcription coregulator activity. Involved in several processes, including cellular response to gamma radiation; positive regulation of osteoblast differentiation; and regulation of gene expression. Acts upstream of or within regulation of neurogenesis and regulation of stem cell proliferation. Located in cell junction; cytosol; and nucleoplasm. Part of TEAD-YAP complex. Implicated in uveal coloboma-cleft lip and palate-intellectual disability. Biomarker of colorectal cancer.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: 65 kDa Yes-associated protein; COB1; transcriptional coactivator YAP1; YAP; YAP-1; YAP2; YAP65; Yes associated protein 1; Yes-associated protein 1; Yes-associated protein 1, 65kDa; yes-associated protein 2; yes-associated protein beta; yes-associated protein delta; yes-associated protein YAP65 homolog; YKI; yorkie homolog
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: YAP1P1   YAP1P2   YAP1P3  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811102,110,447 - 102,233,424 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11102,110,447 - 102,233,424 (+)EnsemblGRCh38hg38GRCh38
GRCh3711101,981,178 - 102,104,155 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3611101,486,541 - 101,609,359 (+)NCBINCBI36Build 36hg18NCBI36
Build 3411101,486,540 - 101,609,356NCBI
Celera1199,142,746 - 99,265,700 (+)NCBICelera
Cytogenetic Map11q22.1NCBI
HuRef1197,907,865 - 98,030,476 (+)NCBIHuRef
CHM1_111101,864,181 - 101,987,123 (+)NCBICHM1_1
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(1->4)-beta-D-glucan  (ISO)
(20S)-ginsenoside Rg3  (EXP)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
4,4'-sulfonyldiphenol  (EXP)
acetamide  (ISO)
aconitine  (ISO)
acrolein  (EXP)
aflatoxin B1  (EXP)
alpha-pinene  (EXP)
antirheumatic drug  (EXP)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
arsenite(3-)  (EXP)
belinostat  (EXP)
benzo[a]pyrene  (EXP)
benzo[a]pyrene diol epoxide I  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
Brodifacoum  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (EXP)
captan  (ISO)
carbamazepine  (EXP)
chlorpromazine  (EXP)
choline  (ISO)
chrysene  (ISO)
cisplatin  (EXP,ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (EXP)
coumarin  (EXP)
crocidolite asbestos  (EXP)
Cuprizon  (ISO)
cycloheximide  (EXP)
deoxynivalenol  (EXP)
dexamethasone  (EXP)
dextran sulfate  (ISO)
dibutyl phthalate  (ISO)
dichloroacetic acid  (EXP)
dioxygen  (ISO)
dorsomorphin  (EXP)
doxorubicin  (EXP,ISO)
ethanol  (ISO)
ethyl methanesulfonate  (EXP)
fipronil  (ISO)
fisetin  (EXP)
folic acid  (ISO)
fonofos  (EXP)
formaldehyde  (EXP)
FR900359  (EXP)
fulvestrant  (EXP)
furan  (ISO)
gemcitabine  (EXP)
gingerol  (EXP)
glyphosate  (ISO)
hexadecanoic acid  (EXP)
ibuprofen  (ISO)
indometacin  (EXP)
ivermectin  (EXP)
jaspamide  (EXP)
L-methionine  (ISO)
lead diacetate  (ISO)
Licochalcone A  (EXP)
limonin  (EXP)
MeIQx  (EXP)
melatonin  (ISO)
methylmercury chloride  (EXP)
mono(2-ethylhexyl) phthalate  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-nitrosodiethylamine  (ISO)
ochratoxin A  (ISO)
octreotide  (ISO)
oleic acid  (EXP)
ozone  (EXP)
panobinostat  (EXP)
paracetamol  (EXP,ISO)
paraoxon  (EXP)
parathion  (EXP)
pentachlorophenol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP,ISO)
phenylmercury acetate  (EXP)
quartz  (ISO)
quercetin  (EXP)
SB 431542  (EXP)
sodium arsenite  (EXP)
sorafenib  (EXP)
sunitinib  (EXP)
terbufos  (EXP)
tetrachloromethane  (ISO)
theophylline  (EXP)
thioacetamide  (ISO)
titanium dioxide  (ISO)
trichloroethene  (ISO)
trichostatin A  (EXP)
triptonide  (ISO)
valproic acid  (EXP,ISO)
vemurafenib  (EXP)
verteporfin  (EXP,ISO)
vinclozolin  (ISO)
wortmannin  (EXP)
zearalenone  (ISO)
zinc atom  (EXP)
zinc dichloride  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
blastocyst development  (IEA,ISO)
bud elongation involved in lung branching  (IEA,ISO)
canonical Wnt signaling pathway  (IEA,ISO)
cardiac muscle tissue regeneration  (IEA)
cell morphogenesis  (IEA,ISO)
cell population proliferation  (IEA,ISO)
cellular response to gamma radiation  (IDA)
cellular response to retinoic acid  (IEA,ISO)
DNA damage response  (IDA)
embryonic heart tube morphogenesis  (IEA,ISO)
enterocyte differentiation  (IEA,ISO)
epithelial cell proliferation  (IEA,ISO,ISS)
extrinsic apoptotic signaling pathway  (IEA,ISO)
glandular epithelial cell differentiation  (IEA,ISO)
heart process  (IEA)
hippo signaling  (IBA,IDA,IEA,ISO,NAS,TAS)
interleukin-6-mediated signaling pathway  (IEA)
intestinal epithelial cell development  (IEA)
intestinal epithelial cell differentiation  (IEA,ISO)
keratinocyte differentiation  (IEA,ISO)
lateral mesoderm development  (IEA,ISO)
lung epithelial cell differentiation  (IEA,ISO)
negative regulation of cilium assembly  (IMP)
negative regulation of epithelial cell apoptotic process  (IMP)
negative regulation of epithelial cell differentiation  (IEA,ISO)
negative regulation of extrinsic apoptotic signaling pathway  (IEA,ISO)
negative regulation of fat cell differentiation  (IMP)
negative regulation of gene expression  (IMP)
negative regulation of stem cell differentiation  (IEA,ISO)
negative regulation of transcription by RNA polymerase II  (IMP)
notochord development  (IEA,ISO)
organ growth  (IEA,ISO,ISS)
paraxial mesoderm development  (IEA,ISO)
polarized epithelial cell differentiation  (IC)
positive regulation of canonical Wnt signaling pathway  (IEA,ISO)
positive regulation of cardiac muscle cell proliferation  (IEA)
positive regulation of cell growth  (IDA)
positive regulation of cell population proliferation  (IEA,ISO)
positive regulation of DNA-templated transcription  (IDA,IEA,IMP)
positive regulation of epithelial cell proliferation  (IEA,IMP,ISO)
positive regulation of gene expression  (IMP)
positive regulation of Notch signaling pathway  (IEA)
positive regulation of organ growth  (IEA,ISO)
positive regulation of osteoblast differentiation  (IMP)
positive regulation of protein localization to nucleus  (IEA,ISS)
positive regulation of stem cell population maintenance  (IEA,ISO)
positive regulation of transcription by RNA polymerase II  (IBA,IDA,IEA,ISO)
protein-containing complex assembly  (IDA,IMP)
regulation of canonical Wnt signaling pathway  (IEA,ISO)
regulation of cell population proliferation  (IEA,ISO)
regulation of gene expression  (IEA,ISO)
regulation of keratinocyte proliferation  (IEA,ISO)
regulation of metanephric nephron tubule epithelial cell differentiation  (IEA,ISO)
regulation of neurogenesis  (IDA)
regulation of stem cell proliferation  (IDA,IEA)
response to progesterone  (IDA)
somatic stem cell population maintenance  (IEA,ISO)
tissue homeostasis  (IEA)
trophectodermal cell differentiation  (IEA,ISO)
vasculogenesis  (IEA,ISO)
wound healing  (IEA)

Cellular Component
anchoring junction  (IEA)
cell junction  (IDA)
cell-cell junction  (IEA,ISS)
cytoplasm  (IBA,IDA,IEA)
cytosol  (IDA,IEA,TAS)
female germ cell nucleus  (IEA)
membrane  (IEA)
nucleoplasm  (IDA,TAS)
nucleus  (IBA,IDA,IEA,ISO)
TEAD-YAP complex  (IDA,IEA,IPI)
transcription regulator complex  (IEA)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. LINC00689 participates in proliferation, chemoresistance and metastasis via miR-31-5p/YAP/β-catenin axis in colorectal cancer. Du YL, etal., Exp Cell Res. 2020 Oct 1;395(1):112176. doi: 10.1016/j.yexcr.2020.112176. Epub 2020 Jul 16.
2. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
8. ErbB4 protects against neuronal apoptosis via activation of YAP/PIK3CB signaling pathway in a rat model of subarachnoid hemorrhage. Yan F, etal., Exp Neurol. 2017 Nov;297:92-100. doi: 10.1016/j.expneurol.2017.07.014. Epub 2017 Jul 27.
Additional References at PubMed
PMID:7644498   PMID:7782338   PMID:9202023   PMID:9305852   PMID:10228168   PMID:10358088   PMID:10562288   PMID:11278422   PMID:11278685   PMID:11358867   PMID:11604498   PMID:11743730  
PMID:12118366   PMID:12477932   PMID:12535517   PMID:12807903   PMID:14744259   PMID:15023535   PMID:15096513   PMID:15161933   PMID:15302935   PMID:15324660   PMID:15800888   PMID:15893728  
PMID:16061658   PMID:16166090   PMID:16596258   PMID:16772533   PMID:16894141   PMID:16964243   PMID:17081983   PMID:17110958   PMID:17353931   PMID:17438369   PMID:17502622   PMID:17823615  
PMID:17889654   PMID:17889669   PMID:17974916   PMID:17980593   PMID:18158288   PMID:18175224   PMID:18280240   PMID:18413746   PMID:18565851   PMID:18579750   PMID:18617895   PMID:18640976  
PMID:18701449   PMID:18703216   PMID:18725387   PMID:18953429   PMID:19015275   PMID:19047365   PMID:19111660   PMID:19158374   PMID:19322201   PMID:19371381   PMID:19439659   PMID:19615732  
PMID:19705503   PMID:19797269   PMID:19914168   PMID:19919647   PMID:19935651   PMID:19952108   PMID:20016275   PMID:20048001   PMID:20123905   PMID:20153295   PMID:20219076   PMID:20226166  
PMID:20368466   PMID:20379614   PMID:20677011   PMID:20729916   PMID:20823509   PMID:20841485   PMID:20842732   PMID:20868367   PMID:20947521   PMID:20951342   PMID:21041410   PMID:21041411  
PMID:21076472   PMID:21112960   PMID:21116278   PMID:21118971   PMID:21145499   PMID:21170084   PMID:21187284   PMID:21205866   PMID:21224387   PMID:21278236   PMID:21317925   PMID:21346147  
PMID:21364637   PMID:21376238   PMID:21383157   PMID:21399893   PMID:21454516   PMID:21610251   PMID:21654799   PMID:21666501   PMID:21685363   PMID:21685940   PMID:21708480   PMID:21800344  
PMID:21808241   PMID:21832154   PMID:21856745   PMID:21873635   PMID:21874045   PMID:21900206   PMID:21909427   PMID:21981024   PMID:22012126   PMID:22017875   PMID:22024089   PMID:22042863  
PMID:22056638   PMID:22096589   PMID:22098159   PMID:22234184   PMID:22286761   PMID:22308035   PMID:22337891   PMID:22385262   PMID:22396793   PMID:22436626   PMID:22499345   PMID:22525271  
PMID:22544757   PMID:22558212   PMID:22609549   PMID:22618028   PMID:22632819   PMID:22641346   PMID:22658674   PMID:22689061   PMID:22707013   PMID:22843909   PMID:22863277   PMID:22863883  
PMID:22885925   PMID:22895435   PMID:22921829   PMID:22939629   PMID:22939869   PMID:22948661   PMID:22993325   PMID:23027127   PMID:23027379   PMID:23058008   PMID:23060277   PMID:23158133  
PMID:23160371   PMID:23178811   PMID:23232767   PMID:23245941   PMID:23258147   PMID:23298488   PMID:23298489   PMID:23333314   PMID:23333315   PMID:23340296   PMID:23422184   PMID:23449627  
PMID:23450633   PMID:23502453   PMID:23527718   PMID:23532963   PMID:23535732   PMID:23542177   PMID:23544078   PMID:23558963   PMID:23564455   PMID:23576552   PMID:23594797   PMID:23613971  
PMID:23667252   PMID:23673988   PMID:23685355   PMID:23727052   PMID:23737213   PMID:23760493   PMID:23870412   PMID:23873930   PMID:23897276   PMID:23949920   PMID:23954413   PMID:23994529  
PMID:23994632   PMID:24003252   PMID:24003254   PMID:24023255   PMID:24086533   PMID:24101154   PMID:24101467   PMID:24101513   PMID:24106267   PMID:24106282   PMID:24107629   PMID:24115727  
PMID:24211253   PMID:24223879   PMID:24225952   PMID:24242138   PMID:24255178   PMID:24268772   PMID:24323901   PMID:24324261   PMID:24346160   PMID:24362629   PMID:24366813   PMID:24367099  
PMID:24369055   PMID:24380865   PMID:24389730   PMID:24462371   PMID:24468535   PMID:24482231   PMID:24485923   PMID:24511017   PMID:24525233   PMID:24558021   PMID:24559095   PMID:24581491  
PMID:24606817   PMID:24621512   PMID:24622501   PMID:24643316   PMID:24648515   PMID:24682895   PMID:24703331   PMID:24726915   PMID:24728461   PMID:24747426   PMID:24779718   PMID:24803537  
PMID:24806962   PMID:24810048   PMID:24810989   PMID:24813251   PMID:24833660   PMID:24837480   PMID:24860833   PMID:24881775   PMID:24882516   PMID:24884509   PMID:24906622   PMID:24954536  
PMID:24972085   PMID:24976009   PMID:24981860   PMID:24993351   PMID:25031743   PMID:25078107   PMID:25087979   PMID:25087998   PMID:25101858   PMID:25115923   PMID:25122798   PMID:25127217  
PMID:25168380   PMID:25175178   PMID:25180228   PMID:25201954   PMID:25218593   PMID:25261601   PMID:25270913   PMID:25283809   PMID:25288394   PMID:25290150   PMID:25304677   PMID:25337244  
PMID:25344213   PMID:25360797   PMID:25384421   PMID:25388162   PMID:25393475   PMID:25404446   PMID:25425573   PMID:25433207   PMID:25436413   PMID:25438054   PMID:25468996   PMID:25473897  
PMID:25492964   PMID:25492965   PMID:25502501   PMID:25516090   PMID:25592648   PMID:25605020   PMID:25605730   PMID:25607641   PMID:25607725   PMID:25625370   PMID:25628125   PMID:25635998  
PMID:25636199   PMID:25645929   PMID:25652178   PMID:25658431   PMID:25670079   PMID:25670202   PMID:25691658   PMID:25727017   PMID:25731159   PMID:25739674   PMID:25743273   PMID:25750037  
PMID:25751139   PMID:25751140   PMID:25754111   PMID:25772246   PMID:25794680   PMID:25796446   PMID:25798835   PMID:25811979   PMID:25843714   PMID:25846049   PMID:25846731   PMID:25849865  
PMID:25895125   PMID:25908270   PMID:25915126   PMID:25936800   PMID:25955651   PMID:25962877   PMID:25971581   PMID:25973055   PMID:25998128   PMID:26015398   PMID:26025096   PMID:26039999  
PMID:26056182   PMID:26058078   PMID:26096363   PMID:26119935   PMID:26124339   PMID:26126522   PMID:26136233   PMID:26163939   PMID:26169195   PMID:26173433   PMID:26186194   PMID:26239136  
PMID:26243870   PMID:26254048   PMID:26258633   PMID:26263504   PMID:26272168   PMID:26276632   PMID:26287745   PMID:26295846   PMID:26299613   PMID:26315483   PMID:26316081   PMID:26327812  
PMID:26344197   PMID:26359368   PMID:26364602   PMID:26417066   PMID:26420216   PMID:26426694   PMID:26432639   PMID:26439301   PMID:26458763   PMID:26459179   PMID:26459764   PMID:26496610  
PMID:26549256   PMID:26567630   PMID:26572166   PMID:26574480   PMID:26575609   PMID:26578655   PMID:26592798   PMID:26598551   PMID:26611634   PMID:26617849   PMID:26634820   PMID:26667495  
PMID:26668268   PMID:26668310   PMID:26671411   PMID:26673895   PMID:26678338   PMID:26691213   PMID:26716514   PMID:26731713   PMID:26750334   PMID:26758663   PMID:26759237   PMID:26760575  
PMID:26766309   PMID:26771844   PMID:26791271   PMID:26804165   PMID:26876920   PMID:26884866   PMID:26906552   PMID:26921249   PMID:26923924   PMID:26933062   PMID:26936013   PMID:26944315  
PMID:26947063   PMID:26967905   PMID:26972000   PMID:26977530   PMID:26980066   PMID:26986510   PMID:26989177   PMID:27019624   PMID:27076520   PMID:27105908   PMID:27109047   PMID:27128293  
PMID:27129148   PMID:27155083   PMID:27173435   PMID:27203549   PMID:27205883   PMID:27216189   PMID:27223073   PMID:27248471   PMID:27256071   PMID:27267789   PMID:27270433   PMID:27291091  
PMID:27292796   PMID:27295628   PMID:27300434   PMID:27321186   PMID:27324860   PMID:27325246   PMID:27325643   PMID:27334574   PMID:27359056   PMID:27373987   PMID:27380321   PMID:27382053  
PMID:27383277   PMID:27409162   PMID:27418196   PMID:27425596   PMID:27428284   PMID:27428308   PMID:27429252   PMID:27432214   PMID:27432908   PMID:27440047   PMID:27465555   PMID:27491038  
PMID:27500472   PMID:27527859   PMID:27528232   PMID:27535340   PMID:27546622   PMID:27556512   PMID:27571517   PMID:27578003   PMID:27593935   PMID:27599610   PMID:27605415   PMID:27608849  
PMID:27627196   PMID:27671657   PMID:27684187   PMID:27705928   PMID:27721022   PMID:27753655   PMID:27765671   PMID:27773750   PMID:27780825   PMID:27797825   PMID:27807512   PMID:27815019  
PMID:27826640   PMID:27832779   PMID:27832783   PMID:27835600   PMID:27847303   PMID:27851961   PMID:27864128   PMID:27886176   PMID:27905400   PMID:27907036   PMID:27911857   PMID:27914787  
PMID:27926865   PMID:27973704   PMID:27979972   PMID:27987320   PMID:28003126   PMID:28028053   PMID:28041841   PMID:28052036   PMID:28078823   PMID:28079802   PMID:28093734   PMID:28098159  
PMID:28099921   PMID:28102225   PMID:28103766   PMID:28114269   PMID:28120182   PMID:28130546   PMID:28166194   PMID:28169360   PMID:28174264   PMID:28177901   PMID:28202507   PMID:28205554  
PMID:28241877   PMID:28249813   PMID:28249901   PMID:28249914   PMID:28259973   PMID:28273460   PMID:28274310   PMID:28315328   PMID:28339095   PMID:28345185   PMID:28346439   PMID:28350986  
PMID:28356122   PMID:28360038   PMID:28366633   PMID:28376152   PMID:28376174   PMID:28381547   PMID:28400537   PMID:28415761   PMID:28416184   PMID:28416659   PMID:28430104   PMID:28430338  
PMID:28433598   PMID:28435452   PMID:28438716   PMID:28464980   PMID:28468127   PMID:28470935   PMID:28472799   PMID:28474680   PMID:28475017   PMID:28481329   PMID:28483529   PMID:28504812  
PMID:28512636   PMID:28513598   PMID:28514442   PMID:28537892   PMID:28538170   PMID:28576749   PMID:28593479   PMID:28624413   PMID:28634071   PMID:28642262   PMID:28645247   PMID:28656879  
PMID:28661054   PMID:28675297   PMID:28677425   PMID:28677785   PMID:28682834   PMID:28684311   PMID:28686514   PMID:28697132   PMID:28714135   PMID:28720576   PMID:28754671   PMID:28757481  
PMID:28759011   PMID:28791365   PMID:28791393   PMID:28796324   PMID:28801591   PMID:28824329   PMID:28827520   PMID:28837805   PMID:28845553   PMID:28848049   PMID:28848999   PMID:28849072  
PMID:28861609   PMID:28870693   PMID:28885730   PMID:28892790   PMID:28899737   PMID:28905448   PMID:28916653   PMID:28923553   PMID:28923839   PMID:28923841   PMID:28931725   PMID:28951564  
PMID:28960584   PMID:28962630   PMID:28982981   PMID:28986522   PMID:28991374   PMID:29017057   PMID:29039616   PMID:29069755   PMID:29070586   PMID:29091762   PMID:29100056   PMID:29104085  
PMID:29104479   PMID:29107331   PMID:29115373   PMID:29136529   PMID:29138479   PMID:29154888   PMID:29157094   PMID:29180467   PMID:29183995   PMID:29208682   PMID:29248722   PMID:29257207  
PMID:29259017   PMID:29269485   PMID:29286134   PMID:29303055   PMID:29305865   PMID:29305935   PMID:29306996   PMID:29316250   PMID:29318697   PMID:29321482   PMID:29329575   PMID:29346075  
PMID:29364502   PMID:29382670   PMID:29396428   PMID:29400695   PMID:29403552   PMID:29408336   PMID:29416926   PMID:29436693   PMID:29438698   PMID:29449692   PMID:29452146   PMID:29457552  
PMID:29472569   PMID:29496737   PMID:29499325   PMID:29505957   PMID:29509190   PMID:29545604   PMID:29575527   PMID:29575535   PMID:29587800   PMID:29596030   PMID:29597092   PMID:29598951  
PMID:29599309   PMID:29649630   PMID:29650681   PMID:29661856   PMID:29665979   PMID:29669759   PMID:29669762   PMID:29669796   PMID:29674272   PMID:29680477   PMID:29693249   PMID:29695252  
PMID:29699904   PMID:29700328   PMID:29725063   PMID:29725256   PMID:29749524   PMID:29755126   PMID:29758328   PMID:29762852   PMID:29766649   PMID:29770434   PMID:29780826   PMID:29789528  
PMID:29844307   PMID:29845281   PMID:29848346   PMID:29848699   PMID:29849122   PMID:29850494   PMID:29875149   PMID:29891922   PMID:29895829   PMID:29902078   PMID:29903769   PMID:29903770  
PMID:29907586   PMID:29912317   PMID:29956757   PMID:29963993   PMID:29967145   PMID:29970036   PMID:30008322   PMID:30009411   PMID:30017188   PMID:30021363   PMID:30037822   PMID:30038252  
PMID:30055645   PMID:30056064   PMID:30066917   PMID:30072378   PMID:30078193   PMID:30082728   PMID:30094836   PMID:30099342   PMID:30106444   PMID:30106445   PMID:30111512   PMID:30123063  
PMID:30126976   PMID:30132963   PMID:30134988   PMID:30139767   PMID:30154411   PMID:30180862   PMID:30180863   PMID:30182452   PMID:30205992   PMID:30224758   PMID:30231971   PMID:30266805  
PMID:30289073   PMID:30297104   PMID:30302608   PMID:30312683   PMID:30312684   PMID:30315101   PMID:30323299   PMID:30336780   PMID:30340922   PMID:30341526   PMID:30342005   PMID:30362561  
PMID:30362580   PMID:30385178   PMID:30388809   PMID:30396386   PMID:30401838   PMID:30401982   PMID:30404826   PMID:30409308   PMID:30417565   PMID:30449705   PMID:30456802   PMID:30461308  
PMID:30465058   PMID:30467925   PMID:30470740   PMID:30472188   PMID:30514309   PMID:30519570   PMID:30535506   PMID:30542115   PMID:30559289   PMID:30563933   PMID:30566575   PMID:30629551  
PMID:30631154   PMID:30640473   PMID:30649550   PMID:30665893   PMID:30673917   PMID:30678988   PMID:30685085   PMID:30685130   PMID:30697796   PMID:30717258   PMID:30720184   PMID:30755404  
PMID:30771899   PMID:30794805   PMID:30804013   PMID:30804502   PMID:30811087   PMID:30819540   PMID:30833299   PMID:30859486   PMID:30865227   PMID:30868052   PMID:30875659   PMID:30903741  
PMID:30912138   PMID:30921404   PMID:30925892   PMID:30931936   PMID:30931946   PMID:30933975   PMID:30936457   PMID:30964169   PMID:30967631   PMID:31006631   PMID:31006663   PMID:31014943  
PMID:31015465   PMID:31015482   PMID:31063758   PMID:31068306   PMID:31073205   PMID:31087779   PMID:31091444   PMID:31131051   PMID:31139191   PMID:31142144   PMID:31145701   PMID:31146919  
PMID:31167787   PMID:31168824   PMID:31171701   PMID:31175271   PMID:31187136   PMID:31199671   PMID:31207288   PMID:31216474   PMID:31216773   PMID:31217745   PMID:31220448   PMID:31253203  
PMID:31262999   PMID:31270418   PMID:31271843   PMID:31299894   PMID:31303470   PMID:31338836   PMID:31341276   PMID:31352078   PMID:31376289   PMID:31376525   PMID:31378888   PMID:31393050  
PMID:31409902   PMID:31421821   PMID:31424140   PMID:31428968   PMID:31437458   PMID:31477715   PMID:31478263   PMID:31485767   PMID:31487690   PMID:31496812   PMID:31501420   PMID:31505040  
PMID:31511647   PMID:31522174   PMID:31541452   PMID:31557131   PMID:31558875   PMID:31559693   PMID:31560173   PMID:31562256   PMID:31578200   PMID:31590917   PMID:31592798   PMID:31594864  
PMID:31601778   PMID:31601883   PMID:31606277   PMID:31608998   PMID:31613226   PMID:31617641   PMID:31619268   PMID:31631368   PMID:31636332   PMID:31638241   PMID:31638828   PMID:31641231  
PMID:31669305   PMID:31672841   PMID:31676872   PMID:31678253   PMID:31692299   PMID:31731190   PMID:31733305   PMID:31734728   PMID:31741433   PMID:31748205   PMID:31748975   PMID:31755214  
PMID:31756359   PMID:31771093   PMID:31772328   PMID:31782549   PMID:31785406   PMID:31810603   PMID:31827075   PMID:31831555   PMID:31835537   PMID:31841877   PMID:31848326   PMID:31851786  
PMID:31852972   PMID:31857346   PMID:31863533   PMID:31873172   PMID:31877302   PMID:31878963   PMID:31884247   PMID:31899508   PMID:31900314   PMID:31900393   PMID:31904487   PMID:31913124  
PMID:31913156   PMID:31916327   PMID:31929186   PMID:31931113   PMID:31935369   PMID:31950964   PMID:31957872   PMID:31980612   PMID:31990985   PMID:31996378   PMID:32001115   PMID:32013974  
PMID:32017068   PMID:32053631   PMID:32054505   PMID:32056132   PMID:32066878   PMID:32081881   PMID:32106857   PMID:32119877   PMID:32124532   PMID:32141552   PMID:32159970   PMID:32160412  
PMID:32186675   PMID:32193376   PMID:32198343   PMID:32205868   PMID:32217697   PMID:32220262   PMID:32231000   PMID:32238586   PMID:32246992   PMID:32266459   PMID:32269044   PMID:32271880  
PMID:32277165   PMID:32279070   PMID:32286937   PMID:32292505   PMID:32293349   PMID:32296183   PMID:32297697   PMID:32313141   PMID:32313226   PMID:32319569   PMID:32322254   PMID:32329855  
PMID:32330602   PMID:32366234   PMID:32378727   PMID:32401366   PMID:32409309   PMID:32414151   PMID:32416067   PMID:32428277   PMID:32433460   PMID:32436169   PMID:32445454   PMID:32449862  
PMID:32452550   PMID:32457342   PMID:32482852   PMID:32482863   PMID:32483419   PMID:32488048   PMID:32502546   PMID:32521879   PMID:32534707   PMID:32537835   PMID:32538668   PMID:32541093  
PMID:32544876   PMID:32546241   PMID:32554753   PMID:32561593   PMID:32561850   PMID:32564679   PMID:32567955   PMID:32570219   PMID:32633347   PMID:32633461   PMID:32645410   PMID:32646966  
PMID:32678516   PMID:32690605   PMID:32690652   PMID:32692442   PMID:32706072   PMID:32707033   PMID:32711570   PMID:32712794   PMID:32721553   PMID:32728069   PMID:32747557   PMID:32748155  
PMID:32748312   PMID:32755583   PMID:32761300   PMID:32763976   PMID:32771410   PMID:32779719   PMID:32788868   PMID:32811813   PMID:32816858   PMID:32823612   PMID:32827244   PMID:32827446  
PMID:32851567   PMID:32853630   PMID:32863938   PMID:32896069   PMID:32898639   PMID:32900773   PMID:32912229   PMID:32916597   PMID:32917893   PMID:32918541   PMID:32918976   PMID:32926756  
PMID:32934314   PMID:32943576   PMID:32951332   PMID:32976820   PMID:32985688   PMID:32988861   PMID:32990596   PMID:32991341   PMID:32997793   PMID:32998265   PMID:33000236   PMID:33004621  
PMID:33011388   PMID:33046796   PMID:33057010   PMID:33059240   PMID:33067739   PMID:33074854   PMID:33086070   PMID:33087321   PMID:33089528   PMID:33116297   PMID:33141042   PMID:33146386  
PMID:33146712   PMID:33146905   PMID:33190006   PMID:33197895   PMID:33199845   PMID:33203894   PMID:33207077   PMID:33218077   PMID:33233821   PMID:33242831   PMID:33264106   PMID:33288878  
PMID:33296708   PMID:33297334   PMID:33301614   PMID:33307801   PMID:33314583   PMID:33336855   PMID:33352739   PMID:33358580   PMID:33359469   PMID:33367928   PMID:33368671   PMID:33373332  
PMID:33400016   PMID:33416116   PMID:33420363   PMID:33421513   PMID:33428889   PMID:33445676   PMID:33472949   PMID:33474906   PMID:33495421   PMID:33495890   PMID:33517828   PMID:33547198  
PMID:33571521   PMID:33587979   PMID:33606996   PMID:33613102   PMID:33613118   PMID:33639204   PMID:33640491   PMID:33643786   PMID:33644029   PMID:33651140   PMID:33654199   PMID:33664454  
PMID:33670622   PMID:33672928   PMID:33675985   PMID:33704800   PMID:33707306   PMID:33715372   PMID:33719002   PMID:33723431   PMID:33726796   PMID:33727040   PMID:33730553   PMID:33731717  
PMID:33737493   PMID:33754062   PMID:33777217   PMID:33793788   PMID:33795657   PMID:33798262   PMID:33823241   PMID:33846777   PMID:33850471   PMID:33879786   PMID:33879841   PMID:33880946  
PMID:33888871   PMID:33897873   PMID:33897882   PMID:33913810   PMID:33961781   PMID:33968042   PMID:33970925   PMID:33990464   PMID:33990468   PMID:33990626   PMID:33992804   PMID:34001972  
PMID:34003522   PMID:34004031   PMID:34039707   PMID:34046891   PMID:34058200   PMID:34060624   PMID:34079125   PMID:34082774   PMID:34096606   PMID:34108620   PMID:34118488   PMID:34132362  
PMID:34145394   PMID:34148063   PMID:34155338   PMID:34156713   PMID:34161791   PMID:34167441   PMID:34170441   PMID:34183451   PMID:34186245   PMID:34186485   PMID:34196131   PMID:34196881  
PMID:34200497   PMID:34257617   PMID:34260541   PMID:34270926   PMID:34280359   PMID:34301937   PMID:34303282   PMID:34314754   PMID:34315490   PMID:34315543   PMID:34333382   PMID:34345207  
PMID:34351699   PMID:34381186   PMID:34404733   PMID:34440849   PMID:34459091   PMID:34463254   PMID:34468072   PMID:34471235   PMID:34480788   PMID:34512171   PMID:34515990   PMID:34521817  
PMID:34533050   PMID:34562605   PMID:34575938   PMID:34576008   PMID:34593639   PMID:34597346   PMID:34606042   PMID:34615513   PMID:34651186   PMID:34664408   PMID:34666000   PMID:34672947  
PMID:34672954   PMID:34709727   PMID:34711824   PMID:34743733   PMID:34755530   PMID:34773076   PMID:34795238   PMID:34816392   PMID:34817932   PMID:34826200   PMID:34855209   PMID:34916222  
PMID:34964176   PMID:34968780   PMID:34974798   PMID:34978260   PMID:34990050   PMID:34990589   PMID:34994156   PMID:35000271   PMID:35013218   PMID:35014181   PMID:35015027   PMID:35024322  
PMID:35027733   PMID:35040370   PMID:35044719   PMID:35053353   PMID:35063126   PMID:35072899   PMID:35091324   PMID:35110552   PMID:35140242   PMID:35149670   PMID:35163776   PMID:35173533  
PMID:35173685   PMID:35177822   PMID:35198878   PMID:35210364   PMID:35266885   PMID:35271311   PMID:35271888   PMID:35296440   PMID:35337019   PMID:35401557   PMID:35404538   PMID:35435804  
PMID:35439318   PMID:35449131   PMID:35451959   PMID:35489428   PMID:35500936   PMID:35512098   PMID:35545047   PMID:35546636   PMID:35597479   PMID:35648375   PMID:35703534   PMID:35705032  
PMID:35705994   PMID:35708897   PMID:35718982   PMID:35723276   PMID:35751703   PMID:35819082   PMID:35831314   PMID:35835915   PMID:35858343   PMID:35868058   PMID:35937460   PMID:35941108  
PMID:35951471   PMID:35954207   PMID:35989368   PMID:35993908   PMID:36008392   PMID:36008411   PMID:36037042   PMID:36038253   PMID:36042678   PMID:36044856   PMID:36045416   PMID:36076260  
PMID:36100154   PMID:36123390   PMID:36153320   PMID:36180487   PMID:36187124   PMID:36195847   PMID:36198275   PMID:36198276   PMID:36206100   PMID:36215168   PMID:36254631   PMID:36271031  
PMID:36280829   PMID:36285485   PMID:36288272   PMID:36308276   PMID:36341908   PMID:36350617   PMID:36418715   PMID:36428972   PMID:36470870   PMID:36473310   PMID:36479120   PMID:36537722  
PMID:36562471   PMID:36588499   PMID:36596852   PMID:36598329   PMID:36598364   PMID:36620877   PMID:36633714   PMID:36635430   PMID:36640330   PMID:36656142   PMID:36657504   PMID:36675179  
PMID:36682055   PMID:36694134   PMID:36701989   PMID:36716535   PMID:36719743   PMID:36720791   PMID:36727737   PMID:36732631   PMID:36740402   PMID:36749152   PMID:36774339   PMID:36779581  
PMID:36781122   PMID:36790471   PMID:36801645   PMID:36813921   PMID:36815553   PMID:36828627   PMID:36878833   PMID:36920288   PMID:36921037   PMID:36931259   PMID:36944987   PMID:36946436  
PMID:36964488   PMID:36973973   PMID:37005481   PMID:37014473   PMID:37046308   PMID:37071897   PMID:37080959   PMID:37081542   PMID:37083045   PMID:37095157   PMID:37098971   PMID:37100374  
PMID:37100772   PMID:37147639   PMID:37150829   PMID:37151879   PMID:37155846   PMID:37165917   PMID:37166352   PMID:37170209   PMID:37175796   PMID:37184153   PMID:37185904   PMID:37207933  
PMID:37211224   PMID:37215986   PMID:37219487   PMID:37290285   PMID:37298577   PMID:37307826   PMID:37308716   PMID:37318258   PMID:37340571   PMID:37366601   PMID:37382248   PMID:37385752  
PMID:37414748   PMID:37429790   PMID:37473526   PMID:37489594   PMID:37498061   PMID:37503658   PMID:37525215   PMID:37525423   PMID:37554309   PMID:37558679   PMID:37565816   PMID:37591953  
PMID:37592763   PMID:37626124   PMID:37661566   PMID:37667102   PMID:37676731   PMID:37706312   PMID:37714252   PMID:37741944   PMID:37744228   PMID:37779294   PMID:37793774   PMID:37806457  
PMID:37832781   PMID:37843781   PMID:37895068   PMID:37909958   PMID:37916416   PMID:37917410   PMID:37949382   PMID:37950281   PMID:37968341   PMID:37974224   PMID:37986681   PMID:38017132  
PMID:38057879   PMID:38105758   PMID:38128062   PMID:38136638   PMID:38139151   PMID:38141609   PMID:38182898   PMID:38219531   PMID:38223760   PMID:38242197   PMID:38245781   PMID:38245803  
PMID:38246916   PMID:38247878   PMID:38273642   PMID:38277019   PMID:38280479   PMID:38287009   PMID:38320423   PMID:38331765   PMID:38335557   PMID:38366363   PMID:38392560   PMID:38423248  
PMID:38488622   PMID:38493426   PMID:38501098   PMID:38505381  


Genomics

Comparative Map Data
YAP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811102,110,447 - 102,233,424 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11102,110,447 - 102,233,424 (+)EnsemblGRCh38hg38GRCh38
GRCh3711101,981,178 - 102,104,155 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3611101,486,541 - 101,609,359 (+)NCBINCBI36Build 36hg18NCBI36
Build 3411101,486,540 - 101,609,356NCBI
Celera1199,142,746 - 99,265,700 (+)NCBICelera
Cytogenetic Map11q22.1NCBI
HuRef1197,907,865 - 98,030,476 (+)NCBIHuRef
CHM1_111101,864,181 - 101,987,123 (+)NCBICHM1_1
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBIT2T-CHM13v2.0
Yap1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3997,932,000 - 8,004,890 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl97,932,000 - 8,004,597 (-)EnsemblGRCm39 Ensembl
GRCm3897,931,999 - 8,004,638 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl97,931,999 - 8,004,596 (-)EnsemblGRCm38mm10GRCm38
MGSCv3797,931,999 - 8,004,596 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3697,932,520 - 8,005,109 (-)NCBIMGSCv36mm8
Celera95,324,108 - 5,396,890 (-)NCBICelera
Cytogenetic Map9A1NCBI
cM Map92.46NCBI
Yap1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8813,380,551 - 13,451,640 (-)NCBIGRCr8
mRatBN7.285,095,705 - 5,166,808 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl85,095,722 - 5,167,010 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx89,049,437 - 9,120,258 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.087,347,114 - 7,417,927 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.085,355,414 - 5,426,296 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.086,133,014 - 6,204,240 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl86,135,493 - 6,203,579 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.086,131,653 - 6,202,586 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.484,780,845 - 4,848,881 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.184,780,674 - 4,881,302 (-)NCBI
Celera86,655,412 - 6,723,571 (-)NCBICelera
Cytogenetic Map8q11NCBI
Yap1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554125,423,855 - 5,534,408 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554125,423,866 - 5,533,728 (+)NCBIChiLan1.0ChiLan1.0
YAP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29102,911,890 - 103,039,644 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111104,002,427 - 104,128,009 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01197,061,367 - 97,186,961 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111100,556,689 - 100,681,301 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11100,552,424 - 100,681,301 (+)Ensemblpanpan1.1panPan2
YAP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1529,394,760 - 29,495,977 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl529,394,541 - 29,496,251 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha529,340,746 - 29,445,498 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0529,444,603 - 29,550,383 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl529,447,525 - 29,551,237 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1529,501,168 - 29,606,791 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0529,358,262 - 29,463,735 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0529,533,412 - 29,638,553 (-)NCBIUU_Cfam_GSD_1.0
Yap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494785,795,986 - 85,901,455 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365515,634,751 - 5,740,567 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365515,638,383 - 5,740,523 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
YAP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl932,811,416 - 32,925,603 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1932,811,629 - 32,924,926 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2936,760,481 - 36,872,904 (+)NCBISscrofa10.2Sscrofa10.2susScr3
YAP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1193,479,478 - 93,605,340 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl193,479,135 - 93,606,808 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604332,256,708 - 32,382,950 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Yap1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624878621,214 - 776,363 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in YAP1
70 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_001130145.3(YAP1):c.115_144dup (p.Ala39_Pro48dup) duplication not provided [RCV000722718] Chr11:102110955..102110956 [GRCh38]
Chr11:101981686..101981687 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.370C>T (p.Arg124Ter) single nucleotide variant Congenital ocular coloboma [RCV000106407] Chr11:102114192 [GRCh38]
Chr11:101984923 [GRCh37]
Chr11:11q22.1		 pathogenic
NM_001130145.3(YAP1):c.1066G>T (p.Glu356Ter) single nucleotide variant Uveal coloboma-cleft lip and palate-intellectual disability [RCV000106408] Chr11:102223655 [GRCh38]
Chr11:102094386 [GRCh37]
Chr11:11q22.1		 pathogenic
GRCh38/hg38 11q22.1-22.2(chr11:102130109-102368261)x3 copy number gain See cases [RCV000051934] Chr11:102130109..102368261 [GRCh38]
Chr11:102000840..102238992 [GRCh37]
Chr11:101506050..101744202 [NCBI36]
Chr11:11q22.1-22.2		 uncertain significance
GRCh38/hg38 11q14.1-22.3(chr11:78232836-106779420)x1 copy number loss See cases [RCV000052710] Chr11:78232836..106779420 [GRCh38]
Chr11:77943882..106650146 [GRCh37]
Chr11:77621530..106155356 [NCBI36]
Chr11:11q14.1-22.3		 pathogenic
GRCh38/hg38 11q14.1-22.2(chr11:85242847-102920097)x1 copy number loss See cases [RCV000052711] Chr11:85242847..102920097 [GRCh38]
Chr11:84953891..102738968 [GRCh37]
Chr11:84631539..102296037 [NCBI36]
Chr11:11q14.1-22.2		 pathogenic
GRCh38/hg38 11q22.1-25(chr11:100348599-135040246)x3 copy number gain See cases [RCV000053638] Chr11:100348599..135040246 [GRCh38]
Chr11:100219331..134910140 [GRCh37]
Chr11:99724541..134415350 [NCBI36]
Chr11:11q22.1-25		 pathogenic
NM_001130145.2(YAP1):c.745A>G (p.Ile249Val) single nucleotide variant Lung cancer [RCV000109528] Chr11:102186074 [GRCh38]
Chr11:102056805 [GRCh37]
Chr11:11q22.1		 uncertain significance
GRCh38/hg38 11q22.1-22.3(chr11:98357901-106059146)x1 copy number loss See cases [RCV000136574] Chr11:98357901..106059146 [GRCh38]
Chr11:98228629..105929873 [GRCh37]
Chr11:97733839..105435083 [NCBI36]
Chr11:11q22.1-22.3		 pathogenic
GRCh38/hg38 11q22.1-22.3(chr11:101452984-104044105)x3 copy number gain See cases [RCV000136846] Chr11:101452984..104044105 [GRCh38]
Chr11:101323715..103914833 [GRCh37]
Chr11:100828925..103420043 [NCBI36]
Chr11:11q22.1-22.3		 pathogenic
GRCh38/hg38 11q14.3-22.3(chr11:91086659-109595582)x1 copy number loss See cases [RCV000138038] Chr11:91086659..109595582 [GRCh38]
Chr11:90819827..109466308 [GRCh37]
Chr11:90459475..108971518 [NCBI36]
Chr11:11q14.3-22.3		 pathogenic
GRCh37/hg19 11q22.1-22.2(chr11:102064452-102249344)x3 copy number gain See cases [RCV000240116] Chr11:102064452..102249344 [GRCh37]
Chr11:11q22.1-22.2		 uncertain significance
GRCh37/hg19 11q22.1(chr11:101450649-102064511)x3 copy number gain See cases [RCV000239979] Chr11:101450649..102064511 [GRCh37]
Chr11:11q22.1		 uncertain significance
GRCh37/hg19 11q14.2-22.3(chr11:88152458-109414650)x1 copy number loss See cases [RCV000510457] Chr11:88152458..109414650 [GRCh37]
Chr11:11q14.2-22.3		 pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470) copy number gain See cases [RCV000511729] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
GRCh37/hg19 11q22.1-22.3(chr11:98515900-104970876)x1 copy number loss See cases [RCV000511844] Chr11:98515900..104970876 [GRCh37]
Chr11:11q22.1-22.3		 likely pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3 copy number gain See cases [RCV000510881] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
GRCh37/hg19 11q13.4-23.3(chr11:71588805-116680918)x3 copy number gain not provided [RCV000683374] Chr11:71588805..116680918 [GRCh37]
Chr11:11q13.4-23.3		 pathogenic
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 copy number gain not provided [RCV000737348] Chr11:198510..134934063 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3 copy number gain not provided [RCV000749874] Chr11:70864..134938470 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
GRCh37/hg19 11q14.1-23.2(chr11:80053454-113316236)x1 copy number loss not provided [RCV000737595] Chr11:80053454..113316236 [GRCh37]
Chr11:11q14.1-23.2		 pathogenic
NM_001130145.3(YAP1):c.802+206C>A single nucleotide variant not provided [RCV001708396] Chr11:102186337 [GRCh38]
Chr11:102057068 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.1354A>G (p.Asn452Asp) single nucleotide variant not provided [RCV000896135] Chr11:102229779 [GRCh38]
Chr11:102100510 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.465C>G (p.Pro155=) single nucleotide variant not provided [RCV000952692] Chr11:102114287 [GRCh38]
Chr11:101985018 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.1277-4C>T single nucleotide variant YAP1-related condition [RCV003897934]|not provided [RCV000959228] Chr11:102229698 [GRCh38]
Chr11:102100429 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.896A>G (p.Asn299Ser) single nucleotide variant not provided [RCV000965854] Chr11:102205986 [GRCh38]
Chr11:102076717 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.21G>A (p.Pro7=) single nucleotide variant not provided [RCV000883133] Chr11:102110869 [GRCh38]
Chr11:101981600 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.352C>T (p.Leu118=) single nucleotide variant not provided [RCV000939310] Chr11:102114174 [GRCh38]
Chr11:101984905 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.689-9G>T single nucleotide variant not provided [RCV000949973] Chr11:102186009 [GRCh38]
Chr11:102056740 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.1104C>T (p.Pro368=) single nucleotide variant YAP1-related condition [RCV003918476]|not provided [RCV000971926] Chr11:102223693 [GRCh38]
Chr11:102094424 [GRCh37]
Chr11:11q22.1		 benign|likely benign
NM_001130145.3(YAP1):c.488C>G (p.Ser163Cys) single nucleotide variant Multiple myeloma [RCV000984109] Chr11:102114310 [GRCh38]
Chr11:101985041 [GRCh37]
Chr11:11q22.1		 likely pathogenic
NM_001130145.3(YAP1):c.144C>T (p.Pro48=) single nucleotide variant not provided [RCV000902287] Chr11:102110992 [GRCh38]
Chr11:101981723 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.832C>T (p.Pro278Ser) single nucleotide variant Uveal coloboma-cleft lip and palate-intellectual disability [RCV000988626]|YAP1-related condition [RCV003928636]|not provided [RCV002550610] Chr11:102205922 [GRCh38]
Chr11:102076653 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.163G>T (p.Val55Leu) single nucleotide variant Uveal coloboma-cleft lip and palate-intellectual disability [RCV001197713] Chr11:102111011 [GRCh38]
Chr11:101981742 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.322-247C>T single nucleotide variant not provided [RCV001711063] Chr11:102113897 [GRCh38]
Chr11:101984628 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.991C>T (p.Arg331Trp) single nucleotide variant not provided [RCV000890238] Chr11:102209523 [GRCh38]
Chr11:102080254 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.204C>G (p.Leu68=) single nucleotide variant YAP1-related condition [RCV003968227]|not provided [RCV000899533] Chr11:102111052 [GRCh38]
Chr11:101981783 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.316C>A (p.Arg106=) single nucleotide variant not provided [RCV000900755] Chr11:102111164 [GRCh38]
Chr11:101981895 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.984+10C>T single nucleotide variant not provided [RCV000922759] Chr11:102206084 [GRCh38]
Chr11:102076815 [GRCh37]
Chr11:11q22.1		 benign
GRCh37/hg19 11q22.1-22.3(chr11:98770072-104602846)x1 copy number loss not provided [RCV002472602] Chr11:98770072..104602846 [GRCh37]
Chr11:11q22.1-22.3		 likely pathogenic
GRCh37/hg19 11q22.1-22.3(chr11:99059204-103281943)x3 copy number gain not provided [RCV002472738] Chr11:99059204..103281943 [GRCh37]
Chr11:11q22.1-22.3		 uncertain significance
NM_001130145.3(YAP1):c.689-4A>T single nucleotide variant not provided [RCV001573272] Chr11:102186014 [GRCh38]
Chr11:102056745 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.572+177C>T single nucleotide variant not provided [RCV001695048] Chr11:102114571 [GRCh38]
Chr11:101985302 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.322-157A>G single nucleotide variant not provided [RCV001685170] Chr11:102113987 [GRCh38]
Chr11:101984718 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.1276+42G>C single nucleotide variant Uveal coloboma-cleft lip and palate-intellectual disability [RCV002243366]|not provided [RCV001652258] Chr11:102227623 [GRCh38]
Chr11:102098354 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.-303T>C single nucleotide variant not provided [RCV001694948] Chr11:102110546 [GRCh38]
Chr11:101981277 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.1015A>G (p.Asn339Asp) single nucleotide variant not provided [RCV001247954] Chr11:102209547 [GRCh38]
Chr11:102080278 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.1024A>G (p.Lys342Glu) single nucleotide variant not provided [RCV001531126] Chr11:102209556 [GRCh38]
Chr11:102080287 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.1196_1199del (p.Asp399fs) microsatellite Uveal coloboma-cleft lip and palate-intellectual disability [RCV001262413] Chr11:102227497..102227500 [GRCh38]
Chr11:102098228..102098231 [GRCh37]
Chr11:11q22.1		 likely pathogenic
NM_001130145.3(YAP1):c.770C>T (p.Ser257Phe) single nucleotide variant Uveal coloboma-cleft lip and palate-intellectual disability [RCV001335693] Chr11:102186099 [GRCh38]
Chr11:102056830 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.761A>G (p.Lys254Arg) single nucleotide variant Uveal coloboma-cleft lip and palate-intellectual disability [RCV001269470] Chr11:102186090 [GRCh38]
Chr11:102056821 [GRCh37]
Chr11:11q22.1		 uncertain significance
Single allele deletion Intellectual disability [RCV001293382] Chr11:118359328..118372573 [GRCh37]
Chr11:11p15.3-q23.3		 pathogenic
NC_000011.9:g.(?_94153285)_(111965700_?)del deletion Ataxia-telangiectasia syndrome [RCV001389105] Chr11:94153285..111965700 [GRCh37]
Chr11:11q21-23.1		 pathogenic
NM_001130145.3(YAP1):c.985-262G>A single nucleotide variant not provided [RCV001715243] Chr11:102209255 [GRCh38]
Chr11:102079986 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.236A>G (p.Asn79Ser) single nucleotide variant not provided [RCV003238558] Chr11:102111084 [GRCh38]
Chr11:101981815 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.1A>C (p.Met1Leu) single nucleotide variant not provided [RCV003238559] Chr11:102110849 [GRCh38]
Chr11:101981580 [GRCh37]
Chr11:11q22.1		 uncertain significance
GRCh37/hg19 11q14.1-23.3(chr11:85422071-118022671)x1 copy number loss not provided [RCV001832892] Chr11:85422071..118022671 [GRCh37]
Chr11:11q14.1-23.3		 uncertain significance
NC_000011.9:g.(?_101323686)_(103349981_?)del deletion Jeune thoracic dystrophy [RCV001942288]|not provided [RCV001942287] Chr11:101323686..103349981 [GRCh37]
Chr11:11q22.1-22.3		 pathogenic|no classifications from unflagged records
NM_001130145.3(YAP1):c.985-20G>A single nucleotide variant not provided [RCV002134369] Chr11:102209497 [GRCh38]
Chr11:102080228 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.257T>C (p.Met86Thr) single nucleotide variant Uveal coloboma-cleft lip and palate-intellectual disability [RCV002246820] Chr11:102111105 [GRCh38]
Chr11:101981836 [GRCh37]
Chr11:11q22.1		 pathogenic
NM_001130145.3(YAP1):c.20C>T (p.Pro7Leu) single nucleotide variant not provided [RCV003112879] Chr11:102110868 [GRCh38]
Chr11:101981599 [GRCh37]
Chr11:11q22.1		 uncertain significance
NC_000011.9:g.(?_101374735)_(103349981_?)dup duplication not provided [RCV003122918] Chr11:101374735..103349981 [GRCh37]
Chr11:11q22.1-22.3		 uncertain significance
GRCh37/hg19 11p13-q25(chr11:32799481-134938470)x3 copy number gain MISSED ABORTION [RCV002282973] Chr11:32799481..134938470 [GRCh37]
Chr11:11p13-q25		 pathogenic
GRCh37/hg19 11q22.1-22.3(chr11:101371503-109306519)x1 copy number loss not provided [RCV002472494] Chr11:101371503..109306519 [GRCh37]
Chr11:11q22.1-22.3		 pathogenic
NM_001130145.3(YAP1):c.598C>T (p.Gln200Ter) single nucleotide variant not provided [RCV002842032] Chr11:102162481 [GRCh38]
Chr11:102033212 [GRCh37]
Chr11:11q22.1		 uncertain significance
GRCh37/hg19 11q14.1-22.3(chr11:81478509-104667040)x1 copy number loss not provided [RCV002475722] Chr11:81478509..104667040 [GRCh37]
Chr11:11q14.1-22.3		 pathogenic
NM_001130145.3(YAP1):c.638C>A (p.Thr213Lys) single nucleotide variant Inborn genetic diseases [RCV002732881] Chr11:102162521 [GRCh38]
Chr11:102033252 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.901A>C (p.Asn301His) single nucleotide variant not provided [RCV003082841] Chr11:102205991 [GRCh38]
Chr11:102076722 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.33G>T (p.Pro11=) single nucleotide variant not provided [RCV003083145] Chr11:102110881 [GRCh38]
Chr11:101981612 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.803-13dup duplication not provided [RCV002649994] Chr11:102205879..102205880 [GRCh38]
Chr11:102076610..102076611 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.634G>C (p.Val212Leu) single nucleotide variant Inborn genetic diseases [RCV002747565] Chr11:102162517 [GRCh38]
Chr11:102033248 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.305A>T (p.Lys102Ile) single nucleotide variant Inborn genetic diseases [RCV002921000] Chr11:102111153 [GRCh38]
Chr11:101981884 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.680C>T (p.Ser227Leu) single nucleotide variant not provided [RCV002629219] Chr11:102162563 [GRCh38]
Chr11:102033294 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.355A>G (p.Thr119Ala) single nucleotide variant not provided [RCV003062718] Chr11:102114177 [GRCh38]
Chr11:101984908 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.862C>T (p.Gln288Ter) single nucleotide variant not provided [RCV003029230] Chr11:102205952 [GRCh38]
Chr11:102076683 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.434C>G (p.Thr145Ser) single nucleotide variant Inborn genetic diseases [RCV002812590] Chr11:102114256 [GRCh38]
Chr11:101984987 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.1418G>C (p.Ser473Thr) single nucleotide variant Inborn genetic diseases [RCV003203463] Chr11:102229843 [GRCh38]
Chr11:102100574 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.1004C>T (p.Pro335Leu) single nucleotide variant Inborn genetic diseases [RCV003358655] Chr11:102209536 [GRCh38]
Chr11:102080267 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.313T>C (p.Ser105Pro) single nucleotide variant YAP1-related condition [RCV003418829]|not provided [RCV003720899] Chr11:102111161 [GRCh38]
Chr11:101981892 [GRCh37]
Chr11:11q22.1		 uncertain significance
GRCh37/hg19 11q21-22.3(chr11:97147292-102979905)x3 copy number gain not provided [RCV003484850] Chr11:97147292..102979905 [GRCh37]
Chr11:11q21-22.3		 uncertain significance
NM_001130145.3(YAP1):c.1416A>G (p.Pro472=) single nucleotide variant not provided [RCV003396035] Chr11:102229841 [GRCh38]
Chr11:102100572 [GRCh37]
Chr11:11q22.1		 benign
NM_001130145.3(YAP1):c.11G>A (p.Gly4Glu) single nucleotide variant not provided [RCV003398133] Chr11:102110859 [GRCh38]
Chr11:101981590 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.1245C>T (p.Asp415=) single nucleotide variant not provided [RCV003390128] Chr11:102227550 [GRCh38]
Chr11:102098281 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.62C>T (p.Ser21Leu) single nucleotide variant not specified [RCV003405035] Chr11:102110910 [GRCh38]
Chr11:101981641 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.129_140del (p.Ala44_Ala47del) deletion YAP1-related condition [RCV003901298]|not provided [RCV003716938] Chr11:102110972..102110983 [GRCh38]
Chr11:101981703..101981714 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.160A>C (p.Ile54Leu) single nucleotide variant not provided [RCV003698156] Chr11:102111008 [GRCh38]
Chr11:101981739 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.69C>T (p.Pro23=) single nucleotide variant not provided [RCV003810664] Chr11:102110917 [GRCh38]
Chr11:101981648 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.243C>T (p.Pro81=) single nucleotide variant not provided [RCV003726143] Chr11:102111091 [GRCh38]
Chr11:101981822 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.283TTC[1] (p.Phe96del) microsatellite not provided [RCV003737174] Chr11:102111130..102111132 [GRCh38]
Chr11:101981861..101981863 [GRCh37]
Chr11:11q22.1		 uncertain significance
NM_001130145.3(YAP1):c.321+8C>T single nucleotide variant YAP1-related condition [RCV003939481] Chr11:102111177 [GRCh38]
Chr11:101981908 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.474G>A (p.Gln158=) single nucleotide variant not provided [RCV003733346] Chr11:102114296 [GRCh38]
Chr11:101985027 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.579C>T (p.Ile193=) single nucleotide variant not provided [RCV003550554] Chr11:102162462 [GRCh38]
Chr11:102033193 [GRCh37]
Chr11:11q22.1		 likely benign
NM_001130145.3(YAP1):c.879C>T (p.Gly293=) single nucleotide variant YAP1-related condition [RCV003979763] Chr11:102205969 [GRCh38]
Chr11:102076700 [GRCh37]
Chr11:11q22.1		 likely benign
miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR200Ahsa-miR-200a-3pMirtarbaseexternal_infoWestern blotFunctional MTI23340296
MIR200Ahsa-miR-200a-3pOncomiRDBexternal_infoNANA23340296
MIR375hsa-miR-375Mirecordsexternal_infoNANA20100814
MIR375hsa-miR-375OncomiRDBexternal_infoNANA21856745
MIR375hsa-miR-375OncomiRDBexternal_infoNANA20226166
MIR141hsa-miR-141-3pOncomiRDBexternal_infoNANA21289630

Predicted Target Of
Summary Value
Count of predictions:4277
Count of miRNA genes:825
Interacting mature miRNAs:932
Transcripts:ENST00000282441, ENST00000345877, ENST00000524575, ENST00000526343, ENST00000526594, ENST00000528834, ENST00000529029, ENST00000531439, ENST00000537274
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D11S1339  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711102,057,505 - 102,057,632UniSTSGRCh37
GRCh3711102,057,512 - 102,057,633UniSTSGRCh37
Build 3611101,562,715 - 101,562,842RGDNCBI36
Celera1199,219,055 - 99,219,182RGD
Celera1199,219,062 - 99,219,183UniSTS
Cytogenetic Map11q13UniSTS
HuRef1197,983,970 - 97,984,095UniSTS
HuRef1197,983,977 - 97,984,096UniSTS
Marshfield Genetic Map11100.05RGD
Genethon Genetic Map11104.8UniSTS
TNG Radiation Hybrid Map1147292.0UniSTS
deCODE Assembly Map11104.08UniSTS
Stanford-G3 RH Map114482.0UniSTS
GeneMap99-GB4 RH Map11348.86UniSTS
Whitehead-RH Map11459.6UniSTS
Whitehead-YAC Contig Map11 UniSTS
NCBI RH Map11882.6UniSTS
GeneMap99-G3 RH Map114482.0UniSTS
D11S1762  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711102,015,494 - 102,015,642UniSTSGRCh37
Build 3611101,520,704 - 101,520,852RGDNCBI36
Celera1199,177,048 - 99,177,196RGD
Cytogenetic Map11q13UniSTS
HuRef1197,941,901 - 97,942,049UniSTS
Marshfield Genetic Map1198.45RGD
Marshfield Genetic Map1198.45UniSTS
Genethon Genetic Map11102.6UniSTS
RH47129  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711102,103,623 - 102,103,809UniSTSGRCh37
GRCh376147,731,931 - 147,732,117UniSTSGRCh37
Build 366147,773,624 - 147,773,810RGDNCBI36
Celera1199,265,169 - 99,265,355UniSTS
Celera6148,472,375 - 148,472,561RGD
Cytogenetic Map11q13UniSTS
HuRef1198,029,945 - 98,030,131UniSTS
HuRef6145,295,551 - 145,295,737UniSTS
RH91842  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711101,980,560 - 101,980,694UniSTSGRCh37
Build 3611101,485,770 - 101,485,904RGDNCBI36
Celera1199,142,114 - 99,142,248RGD
Cytogenetic Map11q13UniSTS
HuRef1197,907,233 - 97,907,367UniSTS
GeneMap99-GB4 RH Map11344.41UniSTS
RH41050  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711102,103,685 - 102,103,873UniSTSGRCh37
GRCh376147,731,993 - 147,732,181UniSTSGRCh37
Build 366147,773,686 - 147,773,874RGDNCBI36
Celera1199,265,231 - 99,265,419UniSTS
Celera6148,472,437 - 148,472,625RGD
Cytogenetic Map11q13UniSTS
HuRef1198,030,007 - 98,030,195UniSTS
HuRef6145,295,613 - 145,295,801UniSTS
SHGC-77975  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711102,011,906 - 102,012,227UniSTSGRCh37
Build 3611101,517,116 - 101,517,437RGDNCBI36
Celera1199,173,460 - 99,173,781RGD
Cytogenetic Map11q13UniSTS
HuRef1197,938,313 - 97,938,634UniSTS
RH123128  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711102,095,042 - 102,095,321UniSTSGRCh37
Build 3611101,600,252 - 101,600,531RGDNCBI36
Celera1199,256,589 - 99,256,868RGD
Cytogenetic Map11q13UniSTS
HuRef1198,021,367 - 98,021,646UniSTS
TNG Radiation Hybrid Map1147320.0UniSTS
SHGC-32695  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711102,103,559 - 102,103,708UniSTSGRCh37
GRCh376147,731,865 - 147,732,016UniSTSGRCh37
Build 366147,773,558 - 147,773,709RGDNCBI36
Celera1199,265,105 - 99,265,254UniSTS
Celera6148,472,309 - 148,472,460RGD
Cytogenetic Map11q13UniSTS
HuRef1198,029,881 - 98,030,030UniSTS
HuRef6145,295,485 - 145,295,636UniSTS
TNG Radiation Hybrid Map672432.0UniSTS
SHGC-110032  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711101,989,812 - 101,990,150UniSTSGRCh37
Build 3611101,495,022 - 101,495,360RGDNCBI36
Celera1199,151,367 - 99,151,705RGD
Cytogenetic Map11q13UniSTS
HUM000S656  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711102,103,701 - 102,103,868UniSTSGRCh37
Build 3611101,608,911 - 101,609,078RGDNCBI36
Celera1199,265,247 - 99,265,414RGD
Cytogenetic Map11q13UniSTS
HuRef1198,030,023 - 98,030,190UniSTS
Stanford-G3 RH Map114404.0UniSTS
NCBI RH Map11867.0UniSTS
GeneMap99-G3 RH Map114404.0UniSTS
D11S2249E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711102,103,180 - 102,103,263UniSTSGRCh37
Build 3611101,608,390 - 101,608,473RGDNCBI36
Celera1199,264,726 - 99,264,809RGD
Cytogenetic Map11q13UniSTS
HuRef1198,029,502 - 98,029,585UniSTS
GeneMap99-GB4 RH Map11348.76UniSTS
D11S1339  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11q13UniSTS
Marshfield Genetic Map11100.05UniSTS
Genethon Genetic Map11104.8UniSTS
deCODE Assembly Map11104.08UniSTS
GeneMap99-GB4 RH Map11348.86UniSTS
Whitehead-RH Map11459.6UniSTS
Whitehead-YAC Contig Map11 UniSTS
NCBI RH Map11885.6UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 1 1 3
Medium 2423 2040 1507 539 437 381 4339 2008 1757 393 1416 1537 171 1204 2772 4
Low 15 246 214 85 231 84 17 183 1961 26 41 43 4 1 16 2 2
Below cutoff 697 4 887 5 15 25

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001195044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001195045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001282097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001282098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001282099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001282100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001282101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005271378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005271380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005271381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005271383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011542555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011542556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017017093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054367453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054367454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054367455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054367456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054367457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA854862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB567720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB567721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI128142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK300414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK316116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL832620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP000942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP001527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP002777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY316529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU073244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX780993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC419625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HE864159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HE864160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HE864161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HE864162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HE864163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JA780906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JA780908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF495838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OL825704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X80507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000282441   ⟹   ENSP00000282441
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,110,447 - 102,233,424 (+)Ensembl
RefSeq Acc Id: ENST00000345877   ⟹   ENSP00000331023
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,110,461 - 102,233,423 (+)Ensembl
RefSeq Acc Id: ENST00000524575   ⟹   ENSP00000435602
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,112,514 - 102,230,152 (+)Ensembl
RefSeq Acc Id: ENST00000526343   ⟹   ENSP00000434134
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,110,461 - 102,230,592 (+)Ensembl
RefSeq Acc Id: ENST00000526594
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,162,456 - 102,186,686 (+)Ensembl
RefSeq Acc Id: ENST00000528834
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,226,973 - 102,230,502 (+)Ensembl
RefSeq Acc Id: ENST00000529029   ⟹   ENSP00000431626
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,186,081 - 102,230,579 (+)Ensembl
RefSeq Acc Id: ENST00000531439   ⟹   ENSP00000431574
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,110,849 - 102,229,963 (+)Ensembl
RefSeq Acc Id: ENST00000537274   ⟹   ENSP00000445635
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,110,461 - 102,233,423 (+)Ensembl
RefSeq Acc Id: ENST00000615667   ⟹   ENSP00000478927
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,110,461 - 102,233,423 (+)Ensembl
RefSeq Acc Id: ENST00000629586   ⟹   ENSP00000487519
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11102,110,849 - 102,229,940 (+)Ensembl
RefSeq Acc Id: NM_001130145   ⟹   NP_001123617
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
GRCh3711101,981,151 - 102,104,154 (+)NCBI
HuRef1197,907,865 - 98,030,476 (+)ENTREZGENE
CHM1_111101,864,181 - 101,987,123 (+)NCBI
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001195044   ⟹   NP_001181973
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
GRCh3711101,981,151 - 102,104,154 (+)NCBI
HuRef1197,907,865 - 98,030,476 (+)ENTREZGENE
CHM1_111101,864,181 - 101,987,123 (+)NCBI
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001195045   ⟹   NP_001181974
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,112,448 - 102,233,424 (+)NCBI
GRCh3711101,981,151 - 102,104,154 (+)NCBI
HuRef1197,907,865 - 98,030,476 (+)ENTREZGENE
CHM1_111101,866,159 - 101,987,123 (+)NCBI
T2T-CHM13v2.011102,114,538 - 102,235,509 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001282097   ⟹   NP_001269026
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
HuRef1197,907,865 - 98,030,476 (+)NCBI
CHM1_111101,864,181 - 101,987,123 (+)NCBI
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001282098   ⟹   NP_001269027
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
HuRef1197,907,865 - 98,030,476 (+)NCBI
CHM1_111101,864,181 - 101,987,123 (+)NCBI
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001282099   ⟹   NP_001269028
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
HuRef1197,907,865 - 98,030,476 (+)NCBI
CHM1_111101,864,181 - 101,987,123 (+)NCBI
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001282100   ⟹   NP_001269029
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
HuRef1197,907,865 - 98,030,476 (+)NCBI
CHM1_111101,864,181 - 101,987,123 (+)NCBI
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001282101   ⟹   NP_001269030
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
HuRef1197,907,865 - 98,030,476 (+)NCBI
CHM1_111101,864,181 - 101,987,123 (+)NCBI
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
Sequence:
RefSeq Acc Id: NM_006106   ⟹   NP_006097
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
GRCh3711101,981,151 - 102,104,154 (+)NCBI
Build 3611101,486,541 - 101,609,359 (+)NCBI Archive
HuRef1197,907,865 - 98,030,476 (+)ENTREZGENE
CHM1_111101,864,181 - 101,987,123 (+)NCBI
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005271378   ⟹   XP_005271435
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
GRCh3711101,981,151 - 102,104,154 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005271380   ⟹   XP_005271437
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
GRCh3711101,981,151 - 102,104,154 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005271381   ⟹   XP_005271438
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
GRCh3711101,981,151 - 102,104,154 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005271383   ⟹   XP_005271440
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,447 - 102,233,424 (+)NCBI
GRCh3711101,981,151 - 102,104,154 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011542555   ⟹   XP_011540857
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,111,549 - 102,233,424 (+)NCBI
Sequence:
RefSeq Acc Id: XM_054367453   ⟹   XP_054223428
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
RefSeq Acc Id: XM_054367454   ⟹   XP_054223429
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
RefSeq Acc Id: XM_054367455   ⟹   XP_054223430
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
RefSeq Acc Id: XM_054367456   ⟹   XP_054223431
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.011102,112,538 - 102,235,509 (+)NCBI
RefSeq Acc Id: XM_054367457   ⟹   XP_054223432
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.011102,114,538 - 102,235,509 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001123617 (Get FASTA)   NCBI Sequence Viewer  
  NP_001181973 (Get FASTA)   NCBI Sequence Viewer  
  NP_001181974 (Get FASTA)   NCBI Sequence Viewer  
  NP_001269026 (Get FASTA)   NCBI Sequence Viewer  
  NP_001269027 (Get FASTA)   NCBI Sequence Viewer  
  NP_001269028 (Get FASTA)   NCBI Sequence Viewer  
  NP_001269029 (Get FASTA)   NCBI Sequence Viewer  
  NP_001269030 (Get FASTA)   NCBI Sequence Viewer  
  NP_006097 (Get FASTA)   NCBI Sequence Viewer  
  XP_005271435 (Get FASTA)   NCBI Sequence Viewer  
  XP_005271437 (Get FASTA)   NCBI Sequence Viewer  
  XP_005271438 (Get FASTA)   NCBI Sequence Viewer  
  XP_005271440 (Get FASTA)   NCBI Sequence Viewer  
  XP_011540857 (Get FASTA)   NCBI Sequence Viewer  
  XP_054223428 (Get FASTA)   NCBI Sequence Viewer  
  XP_054223429 (Get FASTA)   NCBI Sequence Viewer  
  XP_054223430 (Get FASTA)   NCBI Sequence Viewer  
  XP_054223431 (Get FASTA)   NCBI Sequence Viewer  
  XP_054223432 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH38235 (Get FASTA)   NCBI Sequence Viewer  
  AAP92710 (Get FASTA)   NCBI Sequence Viewer  
  BAG62143 (Get FASTA)   NCBI Sequence Viewer  
  BAG65295 (Get FASTA)   NCBI Sequence Viewer  
  BAH14487 (Get FASTA)   NCBI Sequence Viewer  
  BAJ41471 (Get FASTA)   NCBI Sequence Viewer  
  BAJ41472 (Get FASTA)   NCBI Sequence Viewer  
  CAA56672 (Get FASTA)   NCBI Sequence Viewer  
  CAD89963 (Get FASTA)   NCBI Sequence Viewer  
  CCH22597 (Get FASTA)   NCBI Sequence Viewer  
  CCH22598 (Get FASTA)   NCBI Sequence Viewer  
  CCI79618 (Get FASTA)   NCBI Sequence Viewer  
  CCI79619 (Get FASTA)   NCBI Sequence Viewer  
  CCI79620 (Get FASTA)   NCBI Sequence Viewer  
  CCI79621 (Get FASTA)   NCBI Sequence Viewer  
  CCI79622 (Get FASTA)   NCBI Sequence Viewer  
  EAW67011 (Get FASTA)   NCBI Sequence Viewer  
  EAW67012 (Get FASTA)   NCBI Sequence Viewer  
  EAW67013 (Get FASTA)   NCBI Sequence Viewer  
  EAW67014 (Get FASTA)   NCBI Sequence Viewer  
  EAW67015 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000282441
  ENSP00000282441.5
  ENSP00000331023
  ENSP00000331023.4
  ENSP00000431574
  ENSP00000431574.1
  ENSP00000431626.1
  ENSP00000434134
  ENSP00000434134.1
  ENSP00000435602
  ENSP00000435602.1
  ENSP00000445635
  ENSP00000445635.1
  ENSP00000478927
  ENSP00000478927.1
  ENSP00000487519
  ENSP00000487519.1
GenBank Protein P46937 (Get FASTA)   NCBI Sequence Viewer  
  UZL85964 (Get FASTA)   NCBI Sequence Viewer  
  UZL85965 (Get FASTA)   NCBI Sequence Viewer  
  UZL85966 (Get FASTA)   NCBI Sequence Viewer  
  UZL85967 (Get FASTA)   NCBI Sequence Viewer  
  UZL85968 (Get FASTA)   NCBI Sequence Viewer  
  UZL85969 (Get FASTA)   NCBI Sequence Viewer  
  UZL85970 (Get FASTA)   NCBI Sequence Viewer  
  UZL85971 (Get FASTA)   NCBI Sequence Viewer  
  UZL85972 (Get FASTA)   NCBI Sequence Viewer  
  UZL85973 (Get FASTA)   NCBI Sequence Viewer  
  UZL85974 (Get FASTA)   NCBI Sequence Viewer  
  UZL85975 (Get FASTA)   NCBI Sequence Viewer  
  UZL85976 (Get FASTA)   NCBI Sequence Viewer  
  UZL85977 (Get FASTA)   NCBI Sequence Viewer  
  UZL85978 (Get FASTA)   NCBI Sequence Viewer  
  UZL85979 (Get FASTA)   NCBI Sequence Viewer  
  UZL85980 (Get FASTA)   NCBI Sequence Viewer  
  UZL85981 (Get FASTA)   NCBI Sequence Viewer  
  UZL85982 (Get FASTA)   NCBI Sequence Viewer  
  UZL85983 (Get FASTA)   NCBI Sequence Viewer  
  UZL85984 (Get FASTA)   NCBI Sequence Viewer  
  UZL85985 (Get FASTA)   NCBI Sequence Viewer  
  UZL85986 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001123617   ⟸   NM_001130145
- Peptide Label: isoform 1
- UniProtKB: Q7Z574 (UniProtKB/Swiss-Prot),   K0L1G3 (UniProtKB/Swiss-Prot),   K0L195 (UniProtKB/Swiss-Prot),   K0KYZ8 (UniProtKB/Swiss-Prot),   K0KQ18 (UniProtKB/Swiss-Prot),   F5H202 (UniProtKB/Swiss-Prot),   E9PRV2 (UniProtKB/Swiss-Prot),   E3WEB6 (UniProtKB/Swiss-Prot),   E3WEB5 (UniProtKB/Swiss-Prot),   B7ZA01 (UniProtKB/Swiss-Prot),   B4DTY1 (UniProtKB/Swiss-Prot),   Q8IUY9 (UniProtKB/Swiss-Prot),   P46937 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001181973   ⟸   NM_001195044
- Peptide Label: isoform 3
- UniProtKB: P46937 (UniProtKB/Swiss-Prot),   Q86T74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_006097   ⟸   NM_006106
- Peptide Label: isoform 2
- UniProtKB: Q86T74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001181974   ⟸   NM_001195045
- Peptide Label: isoform 4
- UniProtKB: Q86T74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005271435   ⟸   XM_005271378
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005271438   ⟸   XM_005271381
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005271437   ⟸   XM_005271380
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005271440   ⟸   XM_005271383
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: NP_001269030   ⟸   NM_001282101
- Peptide Label: isoform 9
- UniProtKB: P46937 (UniProtKB/Swiss-Prot),   K0KVU2 (UniProtKB/TrEMBL),   Q86T74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001269029   ⟸   NM_001282100
- Peptide Label: isoform 8
- UniProtKB: P46937 (UniProtKB/Swiss-Prot),   Q86T74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001269028   ⟸   NM_001282099
- Peptide Label: isoform 7
- UniProtKB: P46937 (UniProtKB/Swiss-Prot),   Q86T74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001269027   ⟸   NM_001282098
- Peptide Label: isoform 5
- Sequence:
RefSeq Acc Id: NP_001269026   ⟸   NM_001282097
- Peptide Label: isoform 6
- UniProtKB: P46937 (UniProtKB/Swiss-Prot),   Q86T74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011540857   ⟸   XM_011542555
- Peptide Label: isoform X5
- UniProtKB: Q86T74 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000331023   ⟸   ENST00000345877
RefSeq Acc Id: ENSP00000431574   ⟸   ENST00000531439
RefSeq Acc Id: ENSP00000282441   ⟸   ENST00000282441
RefSeq Acc Id: ENSP00000487519   ⟸   ENST00000629586
RefSeq Acc Id: ENSP00000478927   ⟸   ENST00000615667
RefSeq Acc Id: ENSP00000445635   ⟸   ENST00000537274
RefSeq Acc Id: ENSP00000435602   ⟸   ENST00000524575
RefSeq Acc Id: ENSP00000434134   ⟸   ENST00000526343
RefSeq Acc Id: ENSP00000431626   ⟸   ENST00000529029
RefSeq Acc Id: XP_054223428   ⟸   XM_054367453
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054223430   ⟸   XM_054367455
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054223429   ⟸   XM_054367454
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054223431   ⟸   XM_054367456
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054223432   ⟸   XM_054367457
- Peptide Label: isoform X5
Protein Domains
WW

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P46937-F1-model_v2 AlphaFold P46937 1-504 view protein structure

Promoters
RGD ID:6789585
Promoter ID:HG_KWN:14031
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell_12Hour,   HeLa_S3
Transcripts:NM_001130145,   NM_006106,   UC001PGU.1,   UC001PGV.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3611101,486,106 - 101,487,007 (+)MPROMDB
RGD ID:6810207
Promoter ID:HG_ACW:13998
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:YAP1.EAPR07,   YAP1.FAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 3611101,487,606 - 101,488,106 (+)MPROMDB
RGD ID:7221897
Promoter ID:EPDNEW_H16695
Type:initiation region
Name:YAP1_1
Description:Yes associated protein 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H16696  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,450 - 102,110,510EPDNEW
RGD ID:7221903
Promoter ID:EPDNEW_H16696
Type:initiation region
Name:YAP1_2
Description:Yes associated protein 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H16695  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811102,110,719 - 102,110,779EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:16262 AgrOrtholog
COSMIC YAP1 COSMIC
Ensembl Genes ENSG00000137693 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000282441 ENTREZGENE
  ENST00000282441.10 UniProtKB/Swiss-Prot
  ENST00000345877 ENTREZGENE
  ENST00000345877.6 UniProtKB/Swiss-Prot
  ENST00000524575 ENTREZGENE
  ENST00000524575.5 UniProtKB/Swiss-Prot
  ENST00000526343 ENTREZGENE
  ENST00000526343.5 UniProtKB/Swiss-Prot
  ENST00000529029.1 UniProtKB/TrEMBL
  ENST00000531439 ENTREZGENE
  ENST00000531439.5 UniProtKB/Swiss-Prot
  ENST00000537274 ENTREZGENE
  ENST00000537274.5 UniProtKB/Swiss-Prot
  ENST00000615667 ENTREZGENE
  ENST00000615667.4 UniProtKB/Swiss-Prot
  ENST00000629586 ENTREZGENE
  ENST00000629586.2 UniProtKB/Swiss-Prot
Gene3D-CATH 2.20.70.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  6.20.430.10 UniProtKB/Swiss-Prot
GTEx ENSG00000137693 GTEx
HGNC ID HGNC:16262 ENTREZGENE
Human Proteome Map YAP1 Human Proteome Map
InterPro WW_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WW_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:10413 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 10413 ENTREZGENE
OMIM 606608 OMIM
PANTHER TRANSCRIPTIONAL COACTIVATOR YAP1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PF00397 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA38103 PharmGKB
PROSITE WW_DOMAIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WW_DOMAIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SM00456 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF51045 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B4DTY1 ENTREZGENE
  B7ZA01 ENTREZGENE
  E3WEB5 ENTREZGENE
  E3WEB6 ENTREZGENE
  E9PRV2 ENTREZGENE
  F5H202 ENTREZGENE
  H0YCI3_HUMAN UniProtKB/TrEMBL
  K0KQ18 ENTREZGENE
  K0KVU2 ENTREZGENE, UniProtKB/TrEMBL
  K0KYZ8 ENTREZGENE
  K0L195 ENTREZGENE
  K0L1G3 ENTREZGENE
  P46937 ENTREZGENE
  Q7Z574 ENTREZGENE
  Q86T74 ENTREZGENE, UniProtKB/TrEMBL
  Q8IUY9 ENTREZGENE
  YAP1_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary B4DTY1 UniProtKB/Swiss-Prot
  B7ZA01 UniProtKB/Swiss-Prot
  E3WEB5 UniProtKB/Swiss-Prot
  E3WEB6 UniProtKB/Swiss-Prot
  E9PRV2 UniProtKB/Swiss-Prot
  F5H202 UniProtKB/Swiss-Prot
  K0KQ18 UniProtKB/Swiss-Prot
  K0KYZ8 UniProtKB/Swiss-Prot
  K0L195 UniProtKB/Swiss-Prot
  K0L1G3 UniProtKB/Swiss-Prot
  Q7Z574 UniProtKB/Swiss-Prot
  Q8IUY9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-12-25 YAP1  Yes1 associated transcriptional regulator  YAP1  Yes associated protein 1  Symbol and/or name change 5135510 APPROVED
2015-11-24 YAP1  Yes associated protein 1  YAP1  Yes-associated protein 1  Symbol and/or name change 5135510 APPROVED
2011-07-27 YAP1  Yes-associated protein 1  YAP1  Yes-associated protein 1, 65kDa  Symbol and/or name change 5135510 APPROVED