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ONTOLOGY REPORT - ANNOTATIONS

Term:nucleotide-excision repair, DNA gap filling
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Accession:GO:0006297 term browser browse the term
Definition:Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes.


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nucleotide-excision repair, DNA gap filling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIG4 DNA ligase 4 involved_in IDA
IBA
IEA		 (PMID:12517771), (PMID:17290226) UniProt
GO_Central
TreeGrafter		 PMID:12517771 PMID:17290226 GO_REF:0000033 GO_REF:0000118 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368 		JBrowse link
G POLB DNA polymerase beta NOT|involved_in IMP (PMID:20227374) UniProt PMID:20227374 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IC
IBA
IEA
IMP		 (PMID:20713449)
(PMID:20227374)		 UniProt
GO_Central
TreeGrafter		 PMID:20227374 PMID:20713449 GO_REF:0000033 GO_REF:0000118 NCBI chr19:50,384,323...50,418,018
Ensembl chr19:50,384,204...50,418,018 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IMP
IBA
IEA		 (PMID:20227374) UniProt
GO_Central
TreeGrafter		 PMID:20227374 GO_REF:0000033 GO_REF:0000118 NCBI chr11:74,592,582...74,669,341
Ensembl chr11:74,493,851...74,669,117 		JBrowse link
G POLE DNA polymerase epsilon, catalytic subunit involved_in IMP
IEA
IBA		 (PMID:20227374) UniProt
TreeGrafter
GO_Central		 PMID:20227374 GO_REF:0000033 GO_REF:0000118 NCBI chr12:132,623,762...132,687,342
Ensembl chr12:132,623,753...132,687,376 		JBrowse link
G POLK DNA polymerase kappa involved_in IMP (PMID:20227374) UniProt PMID:20227374 NCBI chr 5:75,510,774...75,609,991
Ensembl chr 5:75,511,845...75,609,991 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    metabolic process 12437
      primary metabolic process 10668
        nucleobase-containing compound metabolic process 6508
          nucleic acid metabolic process 5904
            DNA metabolic process 1074
              nucleotide-excision repair, DNA gap filling 6
Path 2
Term Annotations click to browse term
  biological_process 19612
    metabolic process 12437
      organic substance metabolic process 11940
        organic cyclic compound metabolic process 7044
          nucleobase-containing compound metabolic process 6508
            nucleic acid metabolic process 5904
              DNA metabolic process 1074
                DNA repair 647
                  nucleotide-excision repair 91
                    nucleotide-excision repair, DNA gap filling 6
paths to the root