FTO (FTO alpha-ketoglutarate dependent dioxygenase) - Rat Genome Database
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Gene: FTO (FTO alpha-ketoglutarate dependent dioxygenase) Homo sapiens
Analyze
Symbol: FTO
Name: FTO alpha-ketoglutarate dependent dioxygenase
RGD ID: 1625089
HGNC Page HGNC
Description: Exhibits several functions, including DNA-N1-methyladenine dioxygenase activity; ferrous iron binding activity; and oxidative RNA demethylase activity. Involved in several processes, including mRNA destabilization; nucleic acid metabolic process; and regulation of brown fat cell differentiation. Localizes to cytosol; nuclear speck; and plasma membrane. Implicated in obesity.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: AlkB homolog 9; ALKBH9; alpha-ketoglutarate-dependent dioxygenase FTO; BMIQ14; fat mass and obesity associated; fat mass and obesity-associated protein; FTO, alpha-ketoglutarate dependent dioxygenase; GDFD; KIAA1752; m6A(m)-demethylase FTO; MGC5149; mRNA (2'-O-methyladenosine-N(6)-)-demethylase FTO; mRNA N(6)-methyladenosine demethylase FTO; tRNA N1-methyl adenine demethylase FTO; U6 small nuclear RNA (2'-O-methyladenosine-N(6)-)-demethylase FTO; U6 small nuclear RNA N(6)-methyladenosine-demethylase FTO
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: FTOP1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1653,701,692 - 54,158,512 (+)EnsemblGRCh38hg38GRCh38
GRCh381653,703,963 - 54,121,941 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371653,737,875 - 54,155,853 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361652,295,376 - 52,705,882 (+)NCBINCBI36hg18NCBI36
Celera1638,252,466 - 38,662,847 (+)NCBI
Cytogenetic Map16q12.2NCBI
HuRef1639,624,702 - 40,035,200 (+)NCBIHuRef
CHM1_11655,145,011 - 55,555,415 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Additional References at PubMed
PMID:8358434   PMID:8619474   PMID:8889549   PMID:9110174   PMID:10501967   PMID:11214970   PMID:12477932   PMID:14702039   PMID:16344560   PMID:17434869   PMID:17463248   PMID:17463249  
PMID:17496892   PMID:17554300   PMID:17657473   PMID:17658951   PMID:17804762   PMID:17917711   PMID:17928949   PMID:17928989   PMID:17942823   PMID:17959933   PMID:17991826   PMID:17996046  
PMID:18048838   PMID:18055244   PMID:18159244   PMID:18212765   PMID:18218107   PMID:18239580   PMID:18249188   PMID:18251005   PMID:18252780   PMID:18256137   PMID:18281390   PMID:18316358  
PMID:18335027   PMID:18336062   PMID:18339204   PMID:18346983   PMID:18347269   PMID:18372903   PMID:18379722   PMID:18426861   PMID:18426866   PMID:18437351   PMID:18445669   PMID:18454148  
PMID:18469204   PMID:18477659   PMID:18478198   PMID:18487448   PMID:18516622   PMID:18535549   PMID:18550552   PMID:18551109   PMID:18551112   PMID:18572014   PMID:18583465   PMID:18591388  
PMID:18597214   PMID:18598350   PMID:18599522   PMID:18616701   PMID:18647953   PMID:18663371   PMID:18682847   PMID:18694974   PMID:18698412   PMID:18719664   PMID:18775698   PMID:18779467  
PMID:18787525   PMID:18794893   PMID:18799002   PMID:18833210   PMID:18838977   PMID:18839134   PMID:18842783   PMID:18846049   PMID:18853134   PMID:18855084   PMID:18948966   PMID:18984658  
PMID:18984664   PMID:18991055   PMID:19002430   PMID:19005641   PMID:19008344   PMID:19016587   PMID:19020324   PMID:19030008   PMID:19053021   PMID:19056611   PMID:19073975   PMID:19079260  
PMID:19079261   PMID:19139842   PMID:19151714   PMID:19153581   PMID:19158205   PMID:19164386   PMID:19169064   PMID:19180072   PMID:19214238   PMID:19224890   PMID:19255736   PMID:19259258  
PMID:19265514   PMID:19278366   PMID:19322589   PMID:19329528   PMID:19373445   PMID:19375760   PMID:19396169   PMID:19470880   PMID:19491387   PMID:19497595   PMID:19542184   PMID:19543202  
PMID:19553259   PMID:19553294   PMID:19557197   PMID:19559399   PMID:19584900   PMID:19587359   PMID:19602701   PMID:19625203   PMID:19668254   PMID:19679263   PMID:19687793   PMID:19692490  
PMID:19720844   PMID:19726594   PMID:19741467   PMID:19746409   PMID:19793853   PMID:19794065   PMID:19798072   PMID:19812171   PMID:19818665   PMID:19828706   PMID:19833889   PMID:19833892  
PMID:19859840   PMID:19862325   PMID:19876004   PMID:19880856   PMID:19906786   PMID:19910641   PMID:19913121   PMID:19913856   PMID:19918250   PMID:19933996   PMID:20003232   PMID:20007308  
PMID:20009087   PMID:20031593   PMID:20031594   PMID:20051647   PMID:20057365   PMID:20075150   PMID:20075932   PMID:20090391   PMID:20092643   PMID:20161779   PMID:20181787   PMID:20186840  
PMID:20203524   PMID:20215397   PMID:20299471   PMID:20337217   PMID:20339516   PMID:20351740   PMID:20362563   PMID:20368485   PMID:20373279   PMID:20376003   PMID:20377915   PMID:20379142  
PMID:20379614   PMID:20386550   PMID:20397748   PMID:20400278   PMID:20404173   PMID:20409671   PMID:20418190   PMID:20421936   PMID:20430937   PMID:20442772   PMID:20467478   PMID:20490451  
PMID:20502638   PMID:20503258   PMID:20509872   PMID:20511725   PMID:20520848   PMID:20571754   PMID:20581827   PMID:20598163   PMID:20616199   PMID:20616309   PMID:20616607   PMID:20628085  
PMID:20628086   PMID:20647405   PMID:20650268   PMID:20702506   PMID:20703240   PMID:20712903   PMID:20717169   PMID:20724581   PMID:20725061   PMID:20733583   PMID:20733585   PMID:20734064  
PMID:20811910   PMID:20813088   PMID:20816152   PMID:20816195   PMID:20819567   PMID:20821366   PMID:20843981   PMID:20858286   PMID:20863147   PMID:20865646   PMID:20879858   PMID:20889853  
PMID:20929593   PMID:20935630   PMID:20943749   PMID:20945952   PMID:20945953   PMID:20948226   PMID:20966902   PMID:20975729   PMID:20976066   PMID:21037115   PMID:21063808   PMID:21094029  
PMID:21098976   PMID:21102462   PMID:21146673   PMID:21150882   PMID:21154332   PMID:21162833   PMID:21175269   PMID:21179003   PMID:21182554   PMID:21186106   PMID:21207518   PMID:21220935  
PMID:21246032   PMID:21248310   PMID:21266646   PMID:21283731   PMID:21317302   PMID:21347432   PMID:21349207   PMID:21379325   PMID:21398525   PMID:21411553   PMID:21438147   PMID:21443588  
PMID:21458110   PMID:21489227   PMID:21491999   PMID:21502950   PMID:21544081   PMID:21544599   PMID:21552555   PMID:21593801   PMID:21598006   PMID:21637715   PMID:21651756   PMID:21687707  
PMID:21706003   PMID:21720422   PMID:21720444   PMID:21720911   PMID:21741858   PMID:21788373   PMID:21796137   PMID:21798115   PMID:21799482   PMID:21814223   PMID:21818152   PMID:21842748  
PMID:21868005   PMID:21869491   PMID:21873635   PMID:21913894   PMID:21917193   PMID:21919686   PMID:21921652   PMID:21935397   PMID:21986706   PMID:21989907   PMID:22002720   PMID:22016090  
PMID:22030988   PMID:22049296   PMID:22069379   PMID:22083549   PMID:22084931   PMID:22109280   PMID:22125610   PMID:22132335   PMID:22141579   PMID:22153534   PMID:22157232   PMID:22179955  
PMID:22187296   PMID:22189543   PMID:22189607   PMID:22222230   PMID:22234326   PMID:22248259   PMID:22265018   PMID:22310469   PMID:22311015   PMID:22311283   PMID:22344221   PMID:22377712  
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PMID:22490751   PMID:22503908   PMID:22504289   PMID:22516774   PMID:22531089   PMID:22589738   PMID:22591707   PMID:22606913   PMID:22614055   PMID:22675492   PMID:22675562   PMID:22693455  
PMID:22695173   PMID:22724641   PMID:22763110   PMID:22791637   PMID:22797368   PMID:22801903   PMID:22817777   PMID:22836643   PMID:22842737   PMID:22847851   PMID:22857884   PMID:22863883  
PMID:22865603   PMID:22872099   PMID:22891219   PMID:22901973   PMID:22911346   PMID:22931202   PMID:22956599   PMID:22982992   PMID:23091647   PMID:23111453   PMID:23130628   PMID:23134754  
PMID:23136261   PMID:23138007   PMID:23142383   PMID:23154192   PMID:23155422   PMID:23155456   PMID:23160181   PMID:23164817   PMID:23165561   PMID:23201545   PMID:23201753   PMID:23209189  
PMID:23218460   PMID:23236435   PMID:23236985   PMID:23251365   PMID:23254338   PMID:23258813   PMID:23284729   PMID:23284998   PMID:23300277   PMID:23341774   PMID:23342142   PMID:23359686  
PMID:23433430   PMID:23438152   PMID:23447422   PMID:23455637   PMID:23461169   PMID:23490278   PMID:23497514   PMID:23505181   PMID:23509208   PMID:23512716   PMID:23535729   PMID:23535733  
PMID:23563607   PMID:23563609   PMID:23573268   PMID:23583978   PMID:23588626   PMID:23591406   PMID:23628854   PMID:23636237   PMID:23653210   PMID:23669352   PMID:23689376   PMID:23691120  
PMID:23701534   PMID:23751871   PMID:23771786   PMID:23820787   PMID:23825611   PMID:23835106   PMID:23840443   PMID:23840863   PMID:23849767   PMID:23860325   PMID:23867619   PMID:23911093  
PMID:23913730   PMID:23921993   PMID:23922112   PMID:23933215   PMID:23944291   PMID:23950990   PMID:23963770   PMID:23977173   PMID:24023349   PMID:24040077   PMID:24053193   PMID:24064335  
PMID:24091943   PMID:24097068   PMID:24102053   PMID:24106974   PMID:24130335   PMID:24219661   PMID:24267414   PMID:24289790   PMID:24307561   PMID:24331679   PMID:24346748   PMID:24348519  
PMID:24385306   PMID:24466303   PMID:24481458   PMID:24488767   PMID:24503721   PMID:24509480   PMID:24532085   PMID:24615093   PMID:24622111   PMID:24622803   PMID:24624915   PMID:24641884  
PMID:24646999   PMID:24673193   PMID:24675148   PMID:24741957   PMID:24754249   PMID:24768648   PMID:24798613   PMID:24807221   PMID:24819256   PMID:24827155   PMID:24861553   PMID:24863145  
PMID:24877091   PMID:24898142   PMID:24911064   PMID:24956226   PMID:25044758   PMID:25048152   PMID:25059067   PMID:25065638   PMID:25074273   PMID:25085501   PMID:25086788   PMID:25102252  
PMID:25104851   PMID:25110886   PMID:25135377   PMID:25144299   PMID:25184161   PMID:25189249   PMID:25224490   PMID:25231870   PMID:25242086   PMID:25251416   PMID:25265168   PMID:25278160  
PMID:25303482   PMID:25367448   PMID:25377722   PMID:25387436   PMID:25394615   PMID:25402378   PMID:25452335   PMID:25498334   PMID:25501231   PMID:25503666   PMID:25510251   PMID:25539997  
PMID:25542809   PMID:25548176   PMID:25592819   PMID:25640768   PMID:25644180   PMID:25647475   PMID:25720386   PMID:25724814   PMID:25753879   PMID:25757373   PMID:25761503   PMID:25793382  
PMID:25801113   PMID:25809737   PMID:25866584   PMID:25881961   PMID:25888059   PMID:25916116   PMID:25929371   PMID:25966591   PMID:26018652   PMID:26032905   PMID:26102344   PMID:26138810  
PMID:26146447   PMID:26186194   PMID:26222659   PMID:26243686   PMID:26260984   PMID:26262713   PMID:26271004   PMID:26287746   PMID:26324055   PMID:26340902   PMID:26354923   PMID:26392018  
PMID:26395551   PMID:26427991   PMID:26429653   PMID:26431034   PMID:26440677   PMID:26457839   PMID:26458076   PMID:26458103   PMID:26529281   PMID:26555680   PMID:26600519   PMID:26642925  
PMID:26680478   PMID:26680676   PMID:26698254   PMID:26700404   PMID:26711810   PMID:26722548   PMID:26722565   PMID:26726774   PMID:26741700   PMID:26766031   PMID:26767945   PMID:26772723  
PMID:26797854   PMID:26820768   PMID:26849546   PMID:26851950   PMID:26852537   PMID:26873362   PMID:26878843   PMID:26884084   PMID:26888713   PMID:26907388   PMID:26908368   PMID:26921105  
PMID:26931363   PMID:26935496   PMID:26948330   PMID:26958016   PMID:27003669   PMID:27105045   PMID:27146691   PMID:27154418   PMID:27156733   PMID:27196486   PMID:27196523   PMID:27207655  
PMID:27218147   PMID:27241637   PMID:27241640   PMID:27249024   PMID:27260224   PMID:27324062   PMID:27342216   PMID:27377581   PMID:27392994   PMID:27394708   PMID:27514607   PMID:27544196  
PMID:27551991   PMID:27558924   PMID:27560134   PMID:27581034   PMID:27596730   PMID:27600277   PMID:27634552   PMID:27650503   PMID:27651333   PMID:27654143   PMID:27659330   PMID:27701175  
PMID:27759977   PMID:27768255   PMID:27820839   PMID:27880917   PMID:27905213   PMID:27920511   PMID:27930556   PMID:27994159   PMID:28002401   PMID:28017614   PMID:28090739   PMID:28116842  
PMID:28257836   PMID:28282466   PMID:28357924   PMID:28384342   PMID:28448500   PMID:28453518   PMID:28464932   PMID:28514442   PMID:28559540   PMID:28566238   PMID:28585683   PMID:28591216  
PMID:28603074   PMID:28626215   PMID:28642257   PMID:28659218   PMID:28662178   PMID:28699988   PMID:28712975   PMID:28738793   PMID:28746203   PMID:28826396   PMID:28849183   PMID:28913579  
PMID:28914195   PMID:28915859   PMID:28954439   PMID:28977517   PMID:29040503   PMID:29101069   PMID:29138452   PMID:29154870   PMID:29161441   PMID:29216901   PMID:29220587   PMID:29229926  
PMID:29233619   PMID:29237556   PMID:29238857   PMID:29260910   PMID:29273742   PMID:29315078   PMID:29315835   PMID:29317321   PMID:29325734   PMID:29343214   PMID:29361938   PMID:29381017  
PMID:29384212   PMID:29416098   PMID:29463151   PMID:29466028   PMID:29469022   PMID:29486327   PMID:29525920   PMID:29529147   PMID:29531329   PMID:29540276   PMID:29548861   PMID:29606151  
PMID:29615496   PMID:29654630   PMID:29657248   PMID:29677190   PMID:29679223   PMID:29686893   PMID:29744713   PMID:29764479   PMID:29778907   PMID:29791485   PMID:29842885   PMID:29854435  
PMID:29893663   PMID:29934339   PMID:29937877   PMID:29997116   PMID:30041557   PMID:30055308   PMID:30091126   PMID:30091536   PMID:30099472   PMID:30104138   PMID:30124167   PMID:30126381  
PMID:30129237   PMID:30137347   PMID:30141234   PMID:30148903   PMID:30170548   PMID:30197295   PMID:30225917   PMID:30273662   PMID:30311592   PMID:30371117   PMID:30380400   PMID:30408245  
PMID:30419927   PMID:30442880   PMID:30465076   PMID:30496407   PMID:30556861   PMID:30566433   PMID:30592864   PMID:30607268   PMID:30621571   PMID:30637548   PMID:30648791   PMID:30655132  
PMID:30656477   PMID:30686248   PMID:30694969   PMID:30718435   PMID:30720838   PMID:30725038   PMID:30733965   PMID:30822753   PMID:30865763   PMID:30871540   PMID:30896429   PMID:30896430  
PMID:30905413   PMID:30922314   PMID:30929646   PMID:30954417   PMID:30983372   PMID:31033179   PMID:31055022   PMID:31075924   PMID:31119882   PMID:31124039   PMID:31125083   PMID:31126299  
PMID:31132105   PMID:31149892   PMID:31239444   PMID:31310836   PMID:31374206   PMID:31401654   PMID:31402168   PMID:31405659   PMID:31444941   PMID:31446792   PMID:31469442   PMID:31470081  
PMID:31477138   PMID:31530225   PMID:31568687   PMID:31622411   PMID:31675538   PMID:31702102   PMID:31810473   PMID:31822664   PMID:31836807   PMID:31852448   PMID:31855561   PMID:31929364  
PMID:31947684   PMID:31967745   PMID:31996075   PMID:32035950   PMID:32050935   PMID:32109558   PMID:32193455   PMID:32296183   PMID:32398148   PMID:32402589   PMID:32505845   PMID:32606006  
PMID:32612360   PMID:32640302   PMID:32651404   PMID:32712935   PMID:32719557   PMID:32763537   PMID:32788640   PMID:32817424   PMID:32848374   PMID:32955223   PMID:33237144   PMID:33288560  


Genomics

Comparative Map Data
FTO
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1653,701,692 - 54,158,512 (+)EnsemblGRCh38hg38GRCh38
GRCh381653,703,963 - 54,121,941 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371653,737,875 - 54,155,853 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361652,295,376 - 52,705,882 (+)NCBINCBI36hg18NCBI36
Celera1638,252,466 - 38,662,847 (+)NCBI
Cytogenetic Map16q12.2NCBI
HuRef1639,624,702 - 40,035,200 (+)NCBIHuRef
CHM1_11655,145,011 - 55,555,415 (+)NCBICHM1_1
Fto
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39892,039,995 - 92,395,061 (+)NCBIGRCm39mm39
GRCm39 Ensembl892,040,153 - 92,395,067 (+)Ensembl
GRCm38891,313,367 - 91,668,433 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl891,313,525 - 91,668,439 (+)EnsemblGRCm38mm10GRCm38
MGSCv37893,837,424 - 94,192,332 (+)NCBIGRCm37mm9NCBIm37
MGSCv36894,203,644 - 94,558,535 (+)NCBImm8
Celera895,629,636 - 95,973,782 (+)NCBICelera
Cytogenetic Map8C5NCBI
cM Map844.34NCBI
Fto
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21915,284,898 - 15,692,142 (-)NCBI
Rnor_6.0 Ensembl1916,772,744 - 17,115,113 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01916,774,549 - 17,115,098 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01927,803,098 - 28,182,268 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41916,514,746 - 16,858,800 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11916,517,774 - 16,845,431 (-)NCBI
Celera1915,258,617 - 15,598,740 (-)NCBICelera
Cytogenetic Map19p11NCBI
Fto
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543311,424,176 - 11,813,771 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543311,424,069 - 11,834,955 (+)NCBIChiLan1.0ChiLan1.0
FTO
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11653,023,203 - 53,451,708 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1653,023,425 - 53,490,231 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01633,939,300 - 34,343,419 (+)NCBIMhudiblu_PPA_v0panPan3
FTO
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl261,652,236 - 62,080,059 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1261,699,864 - 62,080,199 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Fto
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364756,321,725 - 6,689,410 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FTO
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl631,174,569 - 31,564,707 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1631,177,112 - 31,564,674 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
FTO
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1539,487,304 - 39,900,238 (+)NCBI
ChlSab1.1 Ensembl539,487,418 - 39,725,747 (+)Ensembl
Fto
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247572,675,810 - 3,081,751 (-)NCBI

Position Markers
SHGC-61171  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371654,123,619 - 54,123,774UniSTSGRCh37
Build 361652,681,120 - 52,681,275RGDNCBI36
Celera1638,638,092 - 38,638,247RGD
Cytogenetic Map16q12.2UniSTS
HuRef1640,010,441 - 40,010,596UniSTS
GeneMap99-GB4 RH Map16372.93UniSTS
D16S2986  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371653,974,307 - 53,974,508UniSTSGRCh37
Build 361652,531,808 - 52,532,009RGDNCBI36
Celera1638,488,831 - 38,489,032RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,861,240 - 39,861,441UniSTS
Whitehead-RH Map16262.1UniSTS
Whitehead-YAC Contig Map16 UniSTS
NCBI RH Map16393.2UniSTS
SHGC-60860  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371653,934,557 - 53,934,809UniSTSGRCh37
Build 361652,492,058 - 52,492,310RGDNCBI36
Celera1638,449,080 - 38,449,332RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,821,489 - 39,821,741UniSTS
GeneMap99-GB4 RH Map16343.8UniSTS
Whitehead-RH Map16233.9UniSTS
SHGC-3070  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371653,793,678 - 53,793,849UniSTSGRCh37
Build 361652,351,179 - 52,351,350RGDNCBI36
Celera1638,308,133 - 38,308,304RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,680,508 - 39,680,679UniSTS
TNG Radiation Hybrid Map1621873.0UniSTS
RH65144  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371654,040,905 - 54,041,051UniSTSGRCh37
Build 361652,598,406 - 52,598,552RGDNCBI36
Celera1638,555,418 - 38,555,564RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,927,829 - 39,927,975UniSTS
SHGC-84665  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371653,981,532 - 53,981,875UniSTSGRCh37
Build 361652,539,033 - 52,539,376RGDNCBI36
Celera1638,496,051 - 38,496,394RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,868,460 - 39,868,803UniSTS
G63505  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371653,809,018 - 53,809,308UniSTSGRCh37
Build 361652,366,519 - 52,366,809RGDNCBI36
Celera1638,323,473 - 38,323,763RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,695,848 - 39,696,138UniSTS
TNG Radiation Hybrid Map1621884.0UniSTS
D16S2729  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371654,139,195 - 54,139,538UniSTSGRCh37
Build 361652,696,696 - 52,697,039RGDNCBI36
Celera1638,653,663 - 38,654,006RGD
Cytogenetic Map16q12.2UniSTS
HuRef1640,026,016 - 40,026,359UniSTS
D16S2748  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371653,749,820 - 53,750,009UniSTSGRCh37
Build 361652,307,321 - 52,307,510RGDNCBI36
Celera1638,264,411 - 38,264,600RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,636,652 - 39,636,841UniSTS
SHGC-149420  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371653,790,980 - 53,791,327UniSTSGRCh37
Build 361652,348,481 - 52,348,828RGDNCBI36
Celera1638,305,436 - 38,305,783RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,677,810 - 39,678,157UniSTS
TNG Radiation Hybrid Map1621909.0UniSTS
D16S471E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371653,890,837 - 53,890,929UniSTSGRCh37
Build 361652,448,338 - 52,448,430RGDNCBI36
Celera1638,405,289 - 38,405,381RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,777,769 - 39,777,861UniSTS
D16S2971  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371654,148,050 - 54,148,326UniSTSGRCh37
Build 361652,705,551 - 52,705,827RGDNCBI36
Celera1638,662,518 - 38,662,794RGD
Cytogenetic Map16q12.2UniSTS
HuRef1640,034,871 - 40,035,147UniSTS
Whitehead-YAC Contig Map16 UniSTS
SHGC-60773  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371654,147,159 - 54,147,289UniSTSGRCh37
Build 361652,704,660 - 52,704,790RGDNCBI36
Celera1638,661,627 - 38,661,757RGD
Cytogenetic Map16q12.2UniSTS
HuRef1640,033,980 - 40,034,110UniSTS
GeneMap99-GB4 RH Map16349.27UniSTS
Whitehead-RH Map16261.9UniSTS
D16S3246  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371654,114,992 - 54,115,292UniSTSGRCh37
Build 361652,672,493 - 52,672,793RGDNCBI36
Celera1638,629,465 - 38,629,765RGD
Cytogenetic Map16q12.2UniSTS
HuRef1640,001,814 - 40,002,114UniSTS
Whitehead-RH Map16264.2UniSTS
Whitehead-YAC Contig Map16 UniSTS
D16S2577E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371654,148,143 - 54,148,291UniSTSGRCh37
Build 361652,705,644 - 52,705,792RGDNCBI36
Celera1638,662,611 - 38,662,759RGD
Cytogenetic Map16q12.2UniSTS
HuRef1640,034,964 - 40,035,112UniSTS
GeneMap99-GB4 RH Map16349.48UniSTS
STS-AA005225  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371654,061,332 - 54,061,470UniSTSGRCh37
Build 361652,618,833 - 52,618,971RGDNCBI36
Celera1638,575,801 - 38,575,939RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,948,196 - 39,948,331UniSTS
GeneMap99-GB4 RH Map16349.4UniSTS
RH48882  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371654,147,424 - 54,147,587UniSTSGRCh37
Build 361652,704,925 - 52,705,088RGDNCBI36
Celera1638,661,892 - 38,662,055RGD
Cytogenetic Map16q12.2UniSTS
HuRef1640,034,245 - 40,034,408UniSTS
GeneMap99-GB4 RH Map16351.11UniSTS
SHGC-52812  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371654,082,257 - 54,082,449UniSTSGRCh37
Build 361652,639,758 - 52,639,950RGDNCBI36
Celera1638,596,726 - 38,596,918RGD
Cytogenetic Map16q12.2UniSTS
HuRef1639,969,114 - 39,969,306UniSTS
TNG Radiation Hybrid Map1622098.0UniSTS
GeneMap99-G3 RH Map162341.0UniSTS
D1S1423  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map6p22.3-p21.32UniSTS
Cytogenetic Map6q22.33UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map7q11.2UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map9q12UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map18q22.1UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map10p14-p13UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map11q23-q24UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map22cen-q12.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map15q11.2-q21.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map4q28UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map1q41-q42UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map11q24.1UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map3q13UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map8p23-p22UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map9p21.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic MapXq27.2UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map4q31UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map20q11.21-q11.23UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map4q31.23UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map13q33.3UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map4p15.31UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map20q13.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map4q24UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map10pter-q25.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map16p13UniSTS
Cytogenetic Map15q26UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map4p15.1-p14UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map7q32.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map3q21-q24UniSTS
Cytogenetic Map4q13UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map8q24.12UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map6q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map20pter-p12UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map14q22.2UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map6p22-p21UniSTS
Cytogenetic Map17q21.1-q21.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12p13.2-p12.3UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map5q22.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map10q22.3-q23.2UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map3p12.3UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map3q11.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map6p24.2UniSTS
Cytogenetic Map20q13.33UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:8438
Count of miRNA genes:1448
Interacting mature miRNAs:1969
Transcripts:ENST00000268349, ENST00000394647, ENST00000431610, ENST00000460382, ENST00000463855, ENST00000464071, ENST00000471389, ENST00000472835, ENST00000570395
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 61 351 80 17 185 18 577 48 773 129 189 258 7 5 317 1
Low 2371 2330 1616 581 1496 421 3780 2105 2935 284 1249 1351 164 1199 2471 4 1
Below cutoff 305 29 25 268 26 41 3 5 13 3 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_012969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001080432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_156761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011523314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011523315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011523316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017023658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002957840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB051539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC007347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC007496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC007909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK096554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK295196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC001284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC030798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC132892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC137091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA324897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U79260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000268349   ⟹   ENSP00000268349
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,934,030 - 54,114,463 (+)Ensembl
RefSeq Acc Id: ENST00000431610   ⟹   ENSP00000415636
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,886,917 - 54,112,138 (+)Ensembl
RefSeq Acc Id: ENST00000460382   ⟹   ENSP00000417422
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,886,930 - 54,112,987 (+)Ensembl
RefSeq Acc Id: ENST00000463855   ⟹   ENSP00000417843
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,911,256 - 54,114,463 (+)Ensembl
RefSeq Acc Id: ENST00000464071   ⟹   ENSP00000418424
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,704,182 - 54,112,087 (+)Ensembl
RefSeq Acc Id: ENST00000471389   ⟹   ENSP00000418823
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,704,156 - 54,121,941 (+)Ensembl
RefSeq Acc Id: ENST00000472835
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1654,063,637 - 54,112,302 (+)Ensembl
RefSeq Acc Id: ENST00000563011   ⟹   ENSP00000489714
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,826,361 - 54,040,726 (+)Ensembl
RefSeq Acc Id: ENST00000570395
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,704,156 - 53,825,968 (+)Ensembl
RefSeq Acc Id: ENST00000612285   ⟹   ENSP00000490300
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,879,844 - 54,153,448 (+)Ensembl
RefSeq Acc Id: ENST00000635892
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,923,056 - 54,112,632 (+)Ensembl
RefSeq Acc Id: ENST00000636030
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,704,158 - 53,965,858 (+)Ensembl
RefSeq Acc Id: ENST00000636091
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1654,069,896 - 54,114,439 (+)Ensembl
RefSeq Acc Id: ENST00000636218   ⟹   ENSP00000489641
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,703,963 - 53,937,889 (+)Ensembl
RefSeq Acc Id: ENST00000636491   ⟹   ENSP00000490047
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,701,692 - 54,008,560 (+)Ensembl
RefSeq Acc Id: ENST00000636992   ⟹   ENSP00000489886
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,704,156 - 54,111,873 (+)Ensembl
RefSeq Acc Id: ENST00000637001   ⟹   ENSP00000489936
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,704,069 - 53,979,499 (+)Ensembl
RefSeq Acc Id: ENST00000637049   ⟹   ENSP00000489891
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1654,149,690 - 54,158,512 (+)Ensembl
RefSeq Acc Id: ENST00000637062   ⟹   ENSP00000489904
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,888,894 - 53,935,847 (+)Ensembl
RefSeq Acc Id: ENST00000637562   ⟹   ENSP00000490426
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,704,158 - 54,111,835 (+)Ensembl
RefSeq Acc Id: ENST00000637845   ⟹   ENSP00000489638
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,704,158 - 54,121,902 (+)Ensembl
RefSeq Acc Id: ENST00000637969   ⟹   ENSP00000490516
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,704,157 - 54,153,406 (+)Ensembl
RefSeq Acc Id: ENST00000640179   ⟹   ENSP00000490980
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1653,704,185 - 53,844,241 (+)Ensembl
RefSeq Acc Id: NM_001080432   ⟹   NP_001073901
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,156 - 54,121,941 (+)NCBI
GRCh371653,737,875 - 54,148,379 (+)ENTREZGENE
Build 361652,295,376 - 52,705,882 (+)NCBI Archive
HuRef1639,624,702 - 40,035,200 (+)ENTREZGENE
CHM1_11655,145,011 - 55,555,415 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001363891   ⟹   NP_001350820
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NM_001363894   ⟹   NP_001350823
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NM_001363896   ⟹   NP_001350825
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NM_001363897   ⟹   NP_001350826
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NM_001363898   ⟹   NP_001350827
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NM_001363899   ⟹   NP_001350828
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NM_001363900   ⟹   NP_001350829
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NM_001363901   ⟹   NP_001350830
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NM_001363903   ⟹   NP_001350832
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NM_001363905   ⟹   NP_001350834
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NM_001363988   ⟹   NP_001350917
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: NR_156761
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,703,963 - 54,114,467 (+)NCBI
RefSeq Acc Id: XM_011523314   ⟹   XP_011521616
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,142 - 53,975,679 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011523315   ⟹   XP_011521617
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,142 - 53,938,872 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011523316   ⟹   XP_011521618
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,142 - 54,008,747 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017023654   ⟹   XP_016879143
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,142 - 53,956,784 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017023655   ⟹   XP_016879144
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,143 - 53,965,858 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017023656   ⟹   XP_016879145
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,143 - 53,966,148 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017023657   ⟹   XP_016879146
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,143 - 53,937,851 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017023658   ⟹   XP_016879147
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,142 - 53,859,399 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024450437   ⟹   XP_024306205
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,143 - 54,008,568 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002957840
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,142 - 53,888,860 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001073901 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350820 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350823 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350825 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350826 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350827 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350828 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350829 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350830 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350832 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350834 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350917 (Get FASTA)   NCBI Sequence Viewer  
  XP_011521616 (Get FASTA)   NCBI Sequence Viewer  
  XP_011521617 (Get FASTA)   NCBI Sequence Viewer  
  XP_011521618 (Get FASTA)   NCBI Sequence Viewer  
  XP_016879143 (Get FASTA)   NCBI Sequence Viewer  
  XP_016879144 (Get FASTA)   NCBI Sequence Viewer  
  XP_016879145 (Get FASTA)   NCBI Sequence Viewer  
  XP_016879146 (Get FASTA)   NCBI Sequence Viewer  
  XP_016879147 (Get FASTA)   NCBI Sequence Viewer  
  XP_024306205 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB50206 (Get FASTA)   NCBI Sequence Viewer  
  AAH03583 (Get FASTA)   NCBI Sequence Viewer  
  AAH30798 (Get FASTA)   NCBI Sequence Viewer  
  AAI32893 (Get FASTA)   NCBI Sequence Viewer  
  AAI37092 (Get FASTA)   NCBI Sequence Viewer  
  BAB21843 (Get FASTA)   NCBI Sequence Viewer  
  BAG53322 (Get FASTA)   NCBI Sequence Viewer  
  BAG58196 (Get FASTA)   NCBI Sequence Viewer  
  EAW82811 (Get FASTA)   NCBI Sequence Viewer  
  Q9C0B1 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001073901   ⟸   NM_001080432
- Peptide Label: isoform 3
- UniProtKB: Q9C0B1 (UniProtKB/Swiss-Prot),   B3KU60 (UniProtKB/TrEMBL),   Q99770 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011521618   ⟸   XM_011523316
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_011521616   ⟸   XM_011523314
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_011521617   ⟸   XM_011523315
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_016879145   ⟸   XM_017023656
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_016879143   ⟸   XM_017023654
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_016879144   ⟸   XM_017023655
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_016879146   ⟸   XM_017023657
- Peptide Label: isoform X8
- UniProtKB: A0A1B0GTC5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016879147   ⟸   XM_017023658
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_024306205   ⟸   XM_024450437
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: NP_001350834   ⟸   NM_001363905
- Peptide Label: isoform 11
RefSeq Acc Id: NP_001350820   ⟸   NM_001363891
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001350827   ⟸   NM_001363898
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001350828   ⟸   NM_001363899
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001350823   ⟸   NM_001363894
- Peptide Label: isoform 1
RefSeq Acc Id: NP_001350917   ⟸   NM_001363988
- Peptide Label: isoform 12
RefSeq Acc Id: NP_001350825   ⟸   NM_001363896
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001350832   ⟸   NM_001363903
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001350829   ⟸   NM_001363900
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001350830   ⟸   NM_001363901
- Peptide Label: isoform 9
RefSeq Acc Id: NP_001350826   ⟸   NM_001363897
- Peptide Label: isoform 5
RefSeq Acc Id: ENSP00000417843   ⟸   ENST00000463855
RefSeq Acc Id: ENSP00000418424   ⟸   ENST00000464071
RefSeq Acc Id: ENSP00000489641   ⟸   ENST00000636218
RefSeq Acc Id: ENSP00000490047   ⟸   ENST00000636491
RefSeq Acc Id: ENSP00000268349   ⟸   ENST00000268349
RefSeq Acc Id: ENSP00000489886   ⟸   ENST00000636992
RefSeq Acc Id: ENSP00000490426   ⟸   ENST00000637562
RefSeq Acc Id: ENSP00000490516   ⟸   ENST00000637969
RefSeq Acc Id: ENSP00000489638   ⟸   ENST00000637845
RefSeq Acc Id: ENSP00000489904   ⟸   ENST00000637062
RefSeq Acc Id: ENSP00000489891   ⟸   ENST00000637049
RefSeq Acc Id: ENSP00000489936   ⟸   ENST00000637001
RefSeq Acc Id: ENSP00000490300   ⟸   ENST00000612285
RefSeq Acc Id: ENSP00000490980   ⟸   ENST00000640179
RefSeq Acc Id: ENSP00000489714   ⟸   ENST00000563011
RefSeq Acc Id: ENSP00000415636   ⟸   ENST00000431610
RefSeq Acc Id: ENSP00000418823   ⟸   ENST00000471389
RefSeq Acc Id: ENSP00000417422   ⟸   ENST00000460382
Protein Domains
FTO_CTD   FTO_NTD

Promoters
RGD ID:6793430
Promoter ID:HG_KWN:23812
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000268349,   NM_001127897,   NM_015272,   UC002EHQ.1,   UC010CBX.1,   UC010CBY.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361652,295,151 - 52,295,697 (-)MPROMDB
RGD ID:7232231
Promoter ID:EPDNEW_H21861
Type:initiation region
Name:FTO_1
Description:FTO, alpha-ketoglutarate dependent dioxygenase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381653,704,156 - 53,704,216EPDNEW

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_001080432.3(FTO):c.947G>A (p.Arg316Gln) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000001110] Chr16:53873837 [GRCh38]
Chr16:53907749 [GRCh37]
Chr16:16q12.2
pathogenic
NM_001080432.2(FTO):c.1364+34038T>A single nucleotide variant Lung cancer [RCV000100000] Chr16:53968147 [GRCh38]
Chr16:54002059 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.2(FTO):c.1365-29472A>T single nucleotide variant Lung cancer [RCV000100001] Chr16:54082290 [GRCh38]
Chr16:54116202 [GRCh37]
Chr16:16q12.2
uncertain significance
GRCh38/hg38 16q12.1-12.2(chr16:47250644-54121476)x1 copy number loss See cases [RCV000053329] Chr16:47250644..54121476 [GRCh38]
Chr16:47284555..54155388 [GRCh37]
Chr16:45842056..52712889 [NCBI36]
Chr16:16q12.1-12.2
pathogenic
GRCh38/hg38 16q12.1-12.2(chr16:50784329-55566715)x1 copy number loss See cases [RCV000053332] Chr16:50784329..55566715 [GRCh38]
Chr16:50818240..55600627 [GRCh37]
Chr16:49375741..54158128 [NCBI36]
Chr16:16q12.1-12.2
pathogenic
GRCh38/hg38 16q12.2(chr16:53849442-54109066)x1 copy number loss See cases [RCV000137928] Chr16:53849442..54109066 [GRCh38]
Chr16:53883354..54142978 [GRCh37]
Chr16:52440855..52700479 [NCBI36]
Chr16:16q12.2
uncertain significance
GRCh38/hg38 16q12.2-24.3(chr16:52899183-90088654)x3 copy number gain See cases [RCV000143425] Chr16:52899183..90088654 [GRCh38]
Chr16:52933095..90155062 [GRCh37]
Chr16:51490596..88682563 [NCBI36]
Chr16:16q12.2-24.3
pathogenic
GRCh38/hg38 16q12.1-22.1(chr16:49685521-68401712)x3 copy number gain See cases [RCV000143752] Chr16:49685521..68401712 [GRCh38]
Chr16:49719432..68435615 [GRCh37]
Chr16:48276933..66993116 [NCBI36]
Chr16:16q12.1-22.1
pathogenic
NM_001080432.3(FTO):c.956C>T (p.Ser319Phe) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000190415] Chr16:53873846 [GRCh38]
Chr16:53907758 [GRCh37]
Chr16:16q12.2
pathogenic|likely pathogenic|conflicting interpretations of pathogenicity
NM_001080432.3(FTO):c.46-43098T>C single nucleotide variant OBESITY (BMIQ14), SUSCEPTIBILITY TO [RCV000201907] Chr16:53767042 [GRCh38]
Chr16:53800954 [GRCh37]
Chr16:16q12.2
risk factor
GRCh37/hg19 16q11.2-24.3(chr16:46615804-90142285)x1 copy number loss Ductal breast carcinoma [RCV000207138] Chr16:46615804..90142285 [GRCh37]
Chr16:16q11.2-24.3
uncertain significance
GRCh38/hg38 16q12.1-12.2(chr16:48543083-53879916)x1 copy number loss Ductal breast carcinoma [RCV000207292] Chr16:48543083..53879916 [GRCh38]
Chr16:48576994..53913828 [GRCh37]
Chr16:16q12.1-12.2
uncertain significance
NM_001080432.3(FTO):c.1365G>T (p.Arg455Ser) single nucleotide variant not provided [RCV000224338] Chr16:54111762 [GRCh38]
Chr16:54145674 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.99C>T (p.Pro33=) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000301092]|not provided [RCV000957415] Chr16:53810193 [GRCh38]
Chr16:53844105 [GRCh37]
Chr16:16q12.2
benign|likely benign|uncertain significance
NM_001080432.3(FTO):c.487G>A (p.Ala163Thr) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000302311]|not provided [RCV000973053] Chr16:53826227 [GRCh38]
Chr16:53860139 [GRCh37]
Chr16:16q12.2
benign|uncertain significance
NM_001080432.3(FTO):c.*2210A>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000266685] Chr16:54114125 [GRCh38]
Chr16:54148037 [GRCh37]
Chr16:16q12.2
benign|uncertain significance
NM_001080432.3(FTO):c.*1724A>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000288733] Chr16:54113639 [GRCh38]
Chr16:54147551 [GRCh37]
Chr16:16q12.2
likely benign|uncertain significance
NM_001080432.3(FTO):c.*2333C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000288821] Chr16:54114248 [GRCh38]
Chr16:54148160 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1195T>C single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000277820] Chr16:54113110 [GRCh38]
Chr16:54147022 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.-4del deletion Growth retardation, developmental delay, coarse facies, and early death [RCV000296143] Chr16:53704181 [GRCh38]
Chr16:53738093 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2108G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000262237] Chr16:54114023 [GRCh38]
Chr16:54147935 [GRCh37]
Chr16:16q12.2
benign
NM_001080432.3(FTO):c.*2039C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000297463] Chr16:54113954 [GRCh38]
Chr16:54147866 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*116C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000280237] Chr16:54112031 [GRCh38]
Chr16:54145943 [GRCh37]
Chr16:16q12.2
benign|uncertain significance
NM_001080432.3(FTO):c.*322T>C single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000281291] Chr16:54112237 [GRCh38]
Chr16:54146149 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1057G>C single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000366327] Chr16:54112972 [GRCh38]
Chr16:54146884 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1944G>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000260903] Chr16:54113859 [GRCh38]
Chr16:54147771 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2180C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000322133] Chr16:54114095 [GRCh38]
Chr16:54148007 [GRCh37]
Chr16:16q12.2
benign|uncertain significance
NM_001080432.3(FTO):c.*1745G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000344039] Chr16:54113660 [GRCh38]
Chr16:54147572 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1082G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000367527] Chr16:54112997 [GRCh38]
Chr16:54146909 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.*1061C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000271706] Chr16:54112976 [GRCh38]
Chr16:54146888 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.1119+25dup duplication Growth retardation, developmental delay, coarse facies, and early death [RCV000272344] Chr16:53879999..53880000 [GRCh38]
Chr16:53913911..53913912 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1911del deletion Growth retardation, developmental delay, coarse facies, and early death [RCV000369548] Chr16:54113812 [GRCh38]
Chr16:54147724 [GRCh37]
Chr16:16q12.2
benign
NM_001080432.3(FTO):c.*1550C>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000282763] Chr16:54113465 [GRCh38]
Chr16:54147377 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2249A>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000324121] Chr16:54114164 [GRCh38]
Chr16:54148076 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.*2334G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000346181] Chr16:54114249 [GRCh38]
Chr16:54148161 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.*2442A>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000396272] Chr16:54114357 [GRCh38]
Chr16:54148269 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.1306A>C (p.Thr436Pro) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000292139] Chr16:53934051 [GRCh38]
Chr16:53967963 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1331G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000371675] Chr16:54113246 [GRCh38]
Chr16:54147158 [GRCh37]
Chr16:16q12.2
benign|uncertain significance
NM_001080432.3(FTO):c.*301G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000398068] Chr16:54112216 [GRCh38]
Chr16:54146128 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1829G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000308907] Chr16:54113744 [GRCh38]
Chr16:54147656 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*619A>C single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000306118] Chr16:54112534 [GRCh38]
Chr16:54146446 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.*931C>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000306816] Chr16:54112846 [GRCh38]
Chr16:54146758 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.1179T>G (p.Thr393=) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000327460] Chr16:53888891 [GRCh38]
Chr16:53922803 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1860A>C single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000349733] Chr16:54113775 [GRCh38]
Chr16:54147687 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001363891.1(FTO):c.-186C>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000349937] Chr16:53703999 [GRCh38]
Chr16:53737911 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.400G>A (p.Ala134Thr) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000398676]|not provided [RCV000895438] Chr16:53826140 [GRCh38]
Chr16:53860052 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.959C>T (p.Thr320Ile) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000326322] Chr16:53873849 [GRCh38]
Chr16:53907761 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*361C>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000341234] Chr16:54112276 [GRCh38]
Chr16:54146188 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1379del deletion Growth retardation, developmental delay, coarse facies, and early death [RCV000263015] Chr16:54113289 [GRCh38]
Chr16:54147201 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.*1592G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000342393] Chr16:54113507 [GRCh38]
Chr16:54147419 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1403C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000377378] Chr16:54113318 [GRCh38]
Chr16:54147230 [GRCh37]
Chr16:16q12.2
benign|uncertain significance
NM_001080432.3(FTO):c.751+3A>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000361718] Chr16:53826494 [GRCh38]
Chr16:53860406 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1315C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000332812] Chr16:54113230 [GRCh38]
Chr16:54147142 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.*39G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000333237] Chr16:54111954 [GRCh38]
Chr16:54145866 [GRCh37]
Chr16:16q12.2
likely benign|uncertain significance
NM_001080432.3(FTO):c.174T>C (p.Ser58=) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000355842] Chr16:53825914 [GRCh38]
Chr16:53859826 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2301G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000380978] Chr16:54114216 [GRCh38]
Chr16:54148128 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.*1071G>C single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000312822] Chr16:54112986 [GRCh38]
Chr16:54146898 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.*2080A>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000356946] Chr16:54113995 [GRCh38]
Chr16:54147907 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001363891.1(FTO):c.-137G>C single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000395096] Chr16:53704048 [GRCh38]
Chr16:53737960 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1767del deletion Growth retardation, developmental delay, coarse facies, and early death [RCV000396026] Chr16:54113680 [GRCh38]
Chr16:54147592 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*298C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000335333] Chr16:54112213 [GRCh38]
Chr16:54146125 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2362G>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000384288] Chr16:54114277 [GRCh38]
Chr16:54148189 [GRCh37]
Chr16:16q12.2
benign|uncertain significance
NM_001080432.3(FTO):c.783T>A (p.His261Gln) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000266601] Chr16:53844186 [GRCh38]
Chr16:53878098 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2551G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000314521] Chr16:54114466 [GRCh38]
Chr16:54148378 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.*658A>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000360909] Chr16:54112573 [GRCh38]
Chr16:54146485 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.1240-4G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000386511] Chr16:53933981 [GRCh38]
Chr16:53967893 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*88C>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000387682] Chr16:54112003 [GRCh38]
Chr16:54145915 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1380del deletion Growth retardation, developmental delay, coarse facies, and early death [RCV000318090] Chr16:54113295 [GRCh38]
Chr16:54147207 [GRCh37]
Chr16:16q12.2
benign
NM_001080432.3(FTO):c.*721T>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000390533] Chr16:54112636 [GRCh38]
Chr16:54146548 [GRCh37]
Chr16:16q12.2
benign|likely benign
NM_001080432.3(FTO):c.*1911dup duplication Growth retardation, developmental delay, coarse facies, and early death [RCV000314974] Chr16:54113811..54113812 [GRCh38]
Chr16:54147723..54147724 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.1119+12_1119+15del microsatellite Growth retardation, developmental delay, coarse facies, and early death [RCV000362348] Chr16:53879995..53879998 [GRCh38]
Chr16:53913907..53913910 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1896del deletion Growth retardation, developmental delay, coarse facies, and early death [RCV000399067] Chr16:54113811 [GRCh38]
Chr16:54147723 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2401C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000292356] Chr16:54114316 [GRCh38]
Chr16:54148228 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2412C>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000349453] Chr16:54114327 [GRCh38]
Chr16:54148239 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.18T>C (p.Thr6=) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000336116]|Joubert syndrome [RCV000318257]|Meckel-Gruber syndrome [RCV000274776]|Nephronophthisis [RCV000375411] Chr16:53704202 [GRCh38]
Chr16:53738114 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.*2192G>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000376772] Chr16:54114107 [GRCh38]
Chr16:54148019 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.45+8G>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000395088] Chr16:53704237 [GRCh38]
Chr16:53738149 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1704T>C single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000378494] Chr16:54113619 [GRCh38]
Chr16:54147531 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*509G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000398089] Chr16:54112424 [GRCh38]
Chr16:54146336 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.154C>T (p.Arg52Ter) single nucleotide variant not provided [RCV000598325] Chr16:53825894 [GRCh38]
Chr16:53859806 [GRCh37]
Chr16:16q12.2
uncertain significance
GRCh37/hg19 16q11.2-24.3(chr16:46464488-90155062)x3 copy number gain See cases [RCV000446110] Chr16:46464488..90155062 [GRCh37]
Chr16:16q11.2-24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:69193-90274381)x3 copy number gain See cases [RCV000446684] Chr16:69193..90274381 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16q12.2(chr16:53977023-54069147)x1 copy number loss See cases [RCV000448619] Chr16:53977023..54069147 [GRCh37]
Chr16:16q12.2
uncertain significance
GRCh37/hg19 16p13.2-q24.3(chr16:9273328-89548493)x3 copy number gain See cases [RCV000511622] Chr16:9273328..89548493 [GRCh37]
Chr16:16p13.2-q24.3
uncertain significance
GRCh37/hg19 16p11.2-q21(chr16:34197492-64509054)x3 copy number gain See cases [RCV000511791] Chr16:34197492..64509054 [GRCh37]
Chr16:16p11.2-q21
pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46455960-90354753)x1 copy number loss PARP Inhibitor response [RCV000626435] Chr16:46455960..90354753 [GRCh37]
Chr16:16q11.2-24.3
drug response
NM_001080432.3(FTO):c.545G>C (p.Gly182Ala) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116237]|not provided [RCV000514150] Chr16:53826285 [GRCh38]
Chr16:53860197 [GRCh37]
Chr16:16q12.2
benign|likely benign
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062)x3 copy number gain See cases [RCV000512138] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
NM_001080432.3(FTO):c.263A>G (p.Lys88Arg) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000625863] Chr16:53826003 [GRCh38]
Chr16:53859915 [GRCh37]
Chr16:16q12.2
likely pathogenic|uncertain significance
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062) copy number gain See cases [RCV000511296] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46497599-90354753)x1 copy number loss PARP Inhibitor response [RCV000626429] Chr16:46497599..90354753 [GRCh37]
Chr16:16q11.2-24.3
drug response
GRCh37/hg19 16q12.2(chr16:53799506-53906307)x1 copy number loss not provided [RCV000683819] Chr16:53799506..53906307 [GRCh37]
Chr16:16q12.2
likely benign
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90274695)x3 copy number gain not provided [RCV000738918] Chr16:88165..90274695 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:61451-90294632)x3 copy number gain not provided [RCV000738915] Chr16:61451..90294632 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90163275)x3 copy number gain not provided [RCV000738917] Chr16:88165..90163275 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
NM_001080432.3(FTO):c.721G>A (p.Ala241Thr) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116239] Chr16:53826461 [GRCh38]
Chr16:53860373 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.1073C>T (p.Ser358Phe) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001117684] Chr16:53879941 [GRCh38]
Chr16:53913853 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.974A>T (p.Glu325Val) single nucleotide variant not provided [RCV000973740] Chr16:53873864 [GRCh38]
Chr16:53907776 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.1214C>T (p.Ala405Val) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001117686]|not provided [RCV000966003] Chr16:53888926 [GRCh38]
Chr16:53922838 [GRCh37]
Chr16:16q12.2
benign
NM_001080432.3(FTO):c.1384C>T (p.Arg462Ter) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV000779191] Chr16:54111781 [GRCh38]
Chr16:54145693 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.955del (p.Ser319fs) deletion Growth retardation, developmental delay, coarse facies, and early death [RCV000778469] Chr16:53873844 [GRCh38]
Chr16:53907756 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.767G>A (p.Ser256Asn) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116240]|not provided [RCV000886969] Chr16:53844170 [GRCh38]
Chr16:53878082 [GRCh37]
Chr16:16q12.2
benign|uncertain significance
NM_001080432.3(FTO):c.857C>T (p.Ala286Val) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001117682] Chr16:53844260 [GRCh38]
Chr16:53878172 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2190A>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001117897] Chr16:54114105 [GRCh38]
Chr16:54148017 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*888G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116341] Chr16:54112803 [GRCh38]
Chr16:54146715 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.*789C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116340] Chr16:54112704 [GRCh38]
Chr16:54146616 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1281G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119352] Chr16:54113196 [GRCh38]
Chr16:54147108 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.*1378C>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119353] Chr16:54113293 [GRCh38]
Chr16:54147205 [GRCh37]
Chr16:16q12.2
uncertain significance
GRCh37/hg19 16q12.2-21(chr16:53455650-64006604)x3 copy number gain not provided [RCV000848548] Chr16:53455650..64006604 [GRCh37]
Chr16:16q12.2-21
uncertain significance
NM_001363891.1(FTO):c.-168C>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119162] Chr16:53704017 [GRCh38]
Chr16:53737929 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001363891.1(FTO):c.-122C>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119164] Chr16:53704063 [GRCh38]
Chr16:53737975 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.1282G>A (p.Val428Met) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119252] Chr16:53934027 [GRCh38]
Chr16:53967939 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.1295A>G (p.Asn432Ser) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119253] Chr16:53934040 [GRCh38]
Chr16:53967952 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.696T>C (p.His232=) single nucleotide variant not provided [RCV000918212] Chr16:53826436 [GRCh38]
Chr16:53860348 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.601G>A (p.Val201Ile) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116238] Chr16:53826341 [GRCh38]
Chr16:53860253 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2058A>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116441] Chr16:54113973 [GRCh38]
Chr16:54147885 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1215G>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001117788] Chr16:54113130 [GRCh38]
Chr16:54147042 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.*2291G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001117898] Chr16:54114206 [GRCh38]
Chr16:54148118 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001363891.1(FTO):c.-140T>C single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119163] Chr16:53704045 [GRCh38]
Chr16:53737957 [GRCh37]
Chr16:16q12.2
likely benign
GRCh37/hg19 16q12.2(chr16:53789151-54049153)x1 copy number loss not provided [RCV000846883] Chr16:53789151..54049153 [GRCh37]
Chr16:16q12.2
pathogenic
GRCh37/hg19 16q12.2(chr16:53906098-54003147)x1 copy number loss not provided [RCV000848140] Chr16:53906098..54003147 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1170A>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001117787] Chr16:54113085 [GRCh38]
Chr16:54146997 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001363891.1(FTO):c.-43G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119165] Chr16:53704142 [GRCh38]
Chr16:53738054 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.-6G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119166] Chr16:53704179 [GRCh38]
Chr16:53738091 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.1002T>C (p.Ile334=) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001117683]|not provided [RCV000952748] Chr16:53879870 [GRCh38]
Chr16:53913782 [GRCh37]
Chr16:16q12.2
benign
NM_001080432.3(FTO):c.12C>G (p.Thr4=) single nucleotide variant not provided [RCV000931787] Chr16:53704196 [GRCh38]
Chr16:53738108 [GRCh37]
Chr16:16q12.2
benign
NM_001080432.3(FTO):c.912C>T (p.Thr304=) single nucleotide variant not provided [RCV000910083] Chr16:53873802 [GRCh38]
Chr16:53907714 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.600C>T (p.Asn200=) single nucleotide variant not provided [RCV000909349] Chr16:53826340 [GRCh38]
Chr16:53860252 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.123+5G>A single nucleotide variant not provided [RCV000906625] Chr16:53810222 [GRCh38]
Chr16:53844134 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.1122C>T (p.Val374=) single nucleotide variant not provided [RCV000939023] Chr16:53888834 [GRCh38]
Chr16:53922746 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.*597G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116339] Chr16:54112512 [GRCh38]
Chr16:54146424 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.428A>G (p.Asn143Ser) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001121158] Chr16:53826168 [GRCh38]
Chr16:53860080 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.142A>C (p.Lys48Gln) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001121156] Chr16:53825882 [GRCh38]
Chr16:53859794 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*195A>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001121258] Chr16:54112110 [GRCh38]
Chr16:54146022 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.1198A>G (p.Met400Val) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001117685] Chr16:53888910 [GRCh38]
Chr16:53922822 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001363891.1(FTO):c.-210A>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119161] Chr16:53703975 [GRCh38]
Chr16:53737887 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1380G>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119356] Chr16:54113295 [GRCh38]
Chr16:54147207 [GRCh37]
Chr16:16q12.2
benign
NM_001080432.3(FTO):c.*1378C>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119354] Chr16:54113293 [GRCh38]
Chr16:54147205 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1379C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119355] Chr16:54113294 [GRCh38]
Chr16:54147206 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2366C>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119447] Chr16:54114281 [GRCh38]
Chr16:54148193 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*125A>G single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001121257] Chr16:54112040 [GRCh38]
Chr16:54145952 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*568C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116338] Chr16:54112483 [GRCh38]
Chr16:54146395 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*281G>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001121259] Chr16:54112196 [GRCh38]
Chr16:54146108 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.1477G>T (p.Val493Phe) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119254] Chr16:54111874 [GRCh38]
Chr16:54145786 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*101C>A single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119255] Chr16:54112016 [GRCh38]
Chr16:54145928 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*1280C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001119351] Chr16:54113195 [GRCh38]
Chr16:54147107 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.430G>A (p.Asp144Asn) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116236] Chr16:53826170 [GRCh38]
Chr16:53860082 [GRCh37]
Chr16:16q12.2
likely benign
NM_001080432.3(FTO):c.278C>G (p.Pro93Arg) single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001121157] Chr16:53826018 [GRCh38]
Chr16:53859930 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*394A>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001121260] Chr16:54112309 [GRCh38]
Chr16:54146221 [GRCh37]
Chr16:16q12.2
uncertain significance
NM_001080432.3(FTO):c.*2002C>T single nucleotide variant Growth retardation, developmental delay, coarse facies, and early death [RCV001116440] Chr16:54113917 [GRCh38]
Chr16:54147829 [GRCh37]
Chr16:16q12.2
uncertain significance

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:24678 AgrOrtholog
COSMIC FTO COSMIC
Ensembl Genes ENSG00000140718 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000268349 UniProtKB/TrEMBL
  ENSP00000415636 UniProtKB/Swiss-Prot
  ENSP00000417422 UniProtKB/Swiss-Prot
  ENSP00000417843 UniProtKB/Swiss-Prot
  ENSP00000418424 UniProtKB/TrEMBL
  ENSP00000418823 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000489638 UniProtKB/TrEMBL
  ENSP00000489641 ENTREZGENE, UniProtKB/TrEMBL
  ENSP00000489714 UniProtKB/TrEMBL
  ENSP00000489886 UniProtKB/TrEMBL
  ENSP00000489891 UniProtKB/TrEMBL
  ENSP00000489904 UniProtKB/TrEMBL
  ENSP00000489936 ENTREZGENE, UniProtKB/TrEMBL
  ENSP00000490047 UniProtKB/TrEMBL
  ENSP00000490300 UniProtKB/TrEMBL
  ENSP00000490426 UniProtKB/TrEMBL
  ENSP00000490516 UniProtKB/TrEMBL
  ENSP00000490980 UniProtKB/TrEMBL
Ensembl Transcript ENST00000268349 UniProtKB/TrEMBL
  ENST00000431610 UniProtKB/Swiss-Prot
  ENST00000460382 UniProtKB/Swiss-Prot
  ENST00000463855 UniProtKB/Swiss-Prot
  ENST00000464071 UniProtKB/TrEMBL
  ENST00000471389 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000563011 UniProtKB/TrEMBL
  ENST00000612285 UniProtKB/TrEMBL
  ENST00000636030 ENTREZGENE
  ENST00000636218 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000636491 UniProtKB/TrEMBL
  ENST00000636992 UniProtKB/TrEMBL
  ENST00000637001 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000637049 UniProtKB/TrEMBL
  ENST00000637062 UniProtKB/TrEMBL
  ENST00000637562 UniProtKB/TrEMBL
  ENST00000637845 UniProtKB/TrEMBL
  ENST00000637969 UniProtKB/TrEMBL
  ENST00000640179 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.1470 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.120.590 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000140718 GTEx
HGNC ID HGNC:24678 ENTREZGENE
Human Proteome Map FTO Human Proteome Map
InterPro AlkB-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FTO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FTO_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FTO_C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FTO_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:79068 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 79068 ENTREZGENE
OMIM 610966 OMIM
  612460 OMIM
  612938 OMIM
PANTHER PTHR31291 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FTO_CTD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FTO_NTD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA152208656 PharmGKB
SMART FTO_NTD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1B0GTC3_HUMAN UniProtKB/TrEMBL
  A0A1B0GTC5 ENTREZGENE, UniProtKB/TrEMBL
  A0A1B0GTI3_HUMAN UniProtKB/TrEMBL
  A0A1B0GTY1_HUMAN UniProtKB/TrEMBL
  A0A1B0GTY5_HUMAN UniProtKB/TrEMBL
  A0A1B0GTZ8_HUMAN UniProtKB/TrEMBL
  A0A1B0GU26_HUMAN UniProtKB/TrEMBL
  A0A1B0GUC3_HUMAN UniProtKB/TrEMBL
  A0A1B0GUY7_HUMAN UniProtKB/TrEMBL
  A0A1B0GV98_HUMAN UniProtKB/TrEMBL
  A0A1B0GVH5_HUMAN UniProtKB/TrEMBL
  B3KU60 ENTREZGENE, UniProtKB/TrEMBL
  F8WCB8_HUMAN UniProtKB/TrEMBL
  FTO_HUMAN UniProtKB/Swiss-Prot
  Q99770 ENTREZGENE, UniProtKB/TrEMBL
  Q9C0B1 ENTREZGENE
  X6R3I0_HUMAN UniProtKB/TrEMBL
UniProt Secondary A2RUH1 UniProtKB/Swiss-Prot
  B2RNS0 UniProtKB/Swiss-Prot
  Q0P676 UniProtKB/Swiss-Prot
  Q7Z785 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-01-29 FTO  FTO alpha-ketoglutarate dependent dioxygenase    FTO, alpha-ketoglutarate dependent dioxygenase  Symbol and/or name change 5135510 APPROVED
2016-09-20 FTO  FTO, alpha-ketoglutarate dependent dioxygenase    fat mass and obesity associated  Symbol and/or name change 5135510 APPROVED