MTREX (Mtr4 exosome RNA helicase) - Rat Genome Database

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Gene: MTREX (Mtr4 exosome RNA helicase) Homo sapiens
Analyze
Symbol: MTREX
Name: Mtr4 exosome RNA helicase
RGD ID: 1606819
HGNC Page HGNC:18734
Description: Enables ATP binding activity and RNA helicase activity. Involved in DNA damage response; RNA catabolic process; and maturation of 5.8S rRNA. Located in nuclear exosome (RNase complex) and nucleoplasm. Part of TRAMP complex and catalytic step 2 spliceosome. Biomarker of amyotrophic lateral sclerosis.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ATP-dependent helicase SKIV2L2; ATP-dependent RNA helicase DOB1; ATP-dependent RNA helicase SKIV2L2; Dob1; exosome RNA helicase MTR4; fSAP118; functional spliceosome-associated protein 118; KIAA0052; MGC142069; Mtr4; Ski2 like RNA helicase 2; SKIV2L2; superkiller viralicidic activity 2-like 2; TRAMP-like complex helicase
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38555,307,989 - 55,425,579 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl555,307,989 - 55,425,579 (+)EnsemblGRCh38hg38GRCh38
GRCh37554,603,817 - 54,721,407 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36554,639,373 - 54,756,562 (+)NCBINCBI36Build 36hg18NCBI36
Celera551,556,391 - 51,674,226 (+)NCBICelera
Cytogenetic Map5q11.2NCBI
HuRef551,576,539 - 51,694,389 (+)NCBIHuRef
CHM1_1554,607,444 - 54,725,302 (+)NCBICHM1_1
T2T-CHM13v2.0556,135,296 - 56,252,888 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. The LO-BaFL method and ALS microarray expression analysis. Baciu C, etal., BMC Bioinformatics. 2012 Sep 24;13:244. doi: 10.1186/1471-2105-13-244.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. The roles of SSU processome components and surveillance factors in the initial processing of human ribosomal RNA. Sloan KE, etal., RNA. 2014 Apr;20(4):540-50. doi: 10.1261/rna.043471.113. Epub 2014 Feb 18.
Additional References at PubMed
PMID:7584044   PMID:11110791   PMID:11719186   PMID:11790298   PMID:11812149   PMID:11991638   PMID:12429849   PMID:12477932   PMID:14667819   PMID:14676314   PMID:14702039   PMID:14744259  
PMID:15231747   PMID:15489334   PMID:15635413   PMID:16263084   PMID:16344560   PMID:16782053   PMID:17353931   PMID:17412707   PMID:17542649   PMID:17643375   PMID:18029348   PMID:18309376  
PMID:19156129   PMID:20020773   PMID:20467437   PMID:20531386   PMID:20811636   PMID:21081503   PMID:21145461   PMID:21855801   PMID:21873635   PMID:22145905   PMID:22174317   PMID:22586326  
PMID:22658674   PMID:22939629   PMID:22952844   PMID:23602568   PMID:23667531   PMID:24255178   PMID:24332808   PMID:24457600   PMID:24711643   PMID:24778252   PMID:24923560   PMID:24981860  
PMID:25315684   PMID:25665578   PMID:25693804   PMID:25737280   PMID:25852190   PMID:25921289   PMID:26166824   PMID:26186194   PMID:26299517   PMID:26300262   PMID:26344197   PMID:26456651  
PMID:26496610   PMID:26508657   PMID:26673895   PMID:26870752   PMID:27049334   PMID:27434818   PMID:27684187   PMID:27871484   PMID:27905398   PMID:27926873   PMID:28186131   PMID:28302793  
PMID:28330616   PMID:28514442   PMID:28515276   PMID:28604741   PMID:28733371   PMID:28801509   PMID:28977666   PMID:29107693   PMID:29229926   PMID:29298432   PMID:29395067   PMID:29467282  
PMID:29802200   PMID:29844170   PMID:29845934   PMID:29884807   PMID:29902117   PMID:29906447   PMID:29955894   PMID:29991511   PMID:30033366   PMID:30047866   PMID:30196744   PMID:30209976  
PMID:30344098   PMID:30415952   PMID:30462309   PMID:30463901   PMID:30538148   PMID:30804502   PMID:30824372   PMID:30833792   PMID:30842217   PMID:30884312   PMID:30948266   PMID:31048545  
PMID:31059266   PMID:31067453   PMID:31091453   PMID:31180492   PMID:31299612   PMID:31343991   PMID:31358741   PMID:31462741   PMID:31527615   PMID:31586073   PMID:31665637   PMID:32024842  
PMID:32176739   PMID:32350160   PMID:32416067   PMID:32463452   PMID:32707033   PMID:32780723   PMID:32807901   PMID:32971831   PMID:33060197   PMID:33106477   PMID:33239621   PMID:33306668  
PMID:33417871   PMID:33422691   PMID:33729478   PMID:33742100   PMID:33857361   PMID:33859984   PMID:33961781   PMID:34079125   PMID:34091597   PMID:34189442   PMID:34244482   PMID:34244565  
PMID:34349018   PMID:34373451   PMID:34591612   PMID:34709727   PMID:34728620   PMID:34841685   PMID:35013218   PMID:35013556   PMID:35182466   PMID:35241646   PMID:35253629   PMID:35271311  
PMID:35439318   PMID:35509820   PMID:35563538   PMID:35785414   PMID:35831314   PMID:35850772   PMID:35915203   PMID:35944360   PMID:36114006   PMID:36168627   PMID:36215168   PMID:36243803  
PMID:36244648   PMID:36261009   PMID:36273042   PMID:36403484   PMID:36424410   PMID:36490346   PMID:36526897   PMID:36597993   PMID:36912080   PMID:36929008   PMID:36931259   PMID:37071682  
PMID:37167062   PMID:37314180   PMID:37372979   PMID:37536630   PMID:37689310   PMID:37827155   PMID:38113892   PMID:38334954   PMID:38580884   PMID:38777146   PMID:39147351  


Genomics

Comparative Map Data
MTREX
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38555,307,989 - 55,425,579 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl555,307,989 - 55,425,579 (+)EnsemblGRCh38hg38GRCh38
GRCh37554,603,817 - 54,721,407 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36554,639,373 - 54,756,562 (+)NCBINCBI36Build 36hg18NCBI36
Celera551,556,391 - 51,674,226 (+)NCBICelera
Cytogenetic Map5q11.2NCBI
HuRef551,576,539 - 51,694,389 (+)NCBIHuRef
CHM1_1554,607,444 - 54,725,302 (+)NCBICHM1_1
T2T-CHM13v2.0556,135,296 - 56,252,888 (+)NCBIT2T-CHM13v2.0
Mtrex
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913113,004,306 - 113,063,914 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13113,003,952 - 113,063,932 (-)EnsemblGRCm39 Ensembl
GRCm3813112,867,780 - 112,927,380 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13112,867,418 - 112,927,398 (-)EnsemblGRCm38mm10GRCm38
MGSCv3713113,657,988 - 113,717,588 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613113,988,658 - 114,048,258 (-)NCBIMGSCv36mm8
Celera13117,183,410 - 117,243,861 (-)NCBICelera
Cytogenetic Map13D2.2NCBI
cM Map1363.93NCBI
Mtrex
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8246,233,528 - 46,293,827 (-)NCBIGRCr8
mRatBN7.2244,500,326 - 44,560,624 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl244,461,444 - 44,560,627 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx251,613,289 - 51,673,599 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0249,671,649 - 49,731,959 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0244,546,896 - 44,607,345 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0244,726,716 - 44,787,013 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl244,717,781 - 44,786,963 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0263,766,773 - 63,827,191 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4244,247,683 - 44,306,293 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1244,188,294 - 44,198,408 (-)NCBI
Celera240,278,641 - 40,339,354 (-)NCBICelera
Cytogenetic Map2q14NCBI
Mtrex
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544612,270,344 - 12,362,882 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544612,270,338 - 12,362,064 (-)NCBIChiLan1.0ChiLan1.0
MTREX
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2458,515,669 - 58,633,639 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1556,669,298 - 56,787,269 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0558,604,582 - 58,722,532 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1560,227,431 - 60,345,303 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl560,227,431 - 60,345,303 (-)Ensemblpanpan1.1panPan2
MTREX
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1242,660,448 - 42,763,133 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl242,660,653 - 42,763,133 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha239,706,168 - 39,808,488 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0243,124,168 - 43,226,960 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl243,124,357 - 43,226,946 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1240,202,710 - 40,305,343 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0241,004,493 - 41,107,204 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0241,824,794 - 41,927,622 (+)NCBIUU_Cfam_GSD_1.0
Mtrex
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213203,420,524 - 203,522,228 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648012,357,637 - 12,458,728 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648012,357,637 - 12,458,728 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MTREX
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1634,478,272 - 34,606,096 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11634,478,227 - 34,605,508 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21636,587,011 - 36,713,211 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MTREX
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1451,543,976 - 51,667,458 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl451,544,211 - 51,667,254 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666049412,848 - 543,692 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mtrex
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247593,868,662 - 3,965,319 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247593,868,759 - 3,965,446 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MTREX
54 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 5q11.1-12.1(chr5:50288355-63149770)x1 copy number loss See cases [RCV000050797] Chr5:50288355..63149770 [GRCh38]
Chr5:49584189..62445597 [GRCh37]
Chr5:49619946..62481353 [NCBI36]
Chr5:5q11.1-12.1
pathogenic
GRCh38/hg38 5q11.1-11.2(chr5:50288355-56717370)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051838]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051838]|See cases [RCV000051838] Chr5:50288355..56717370 [GRCh38]
Chr5:49584189..56013197 [GRCh37]
Chr5:49619946..56048954 [NCBI36]
Chr5:5q11.1-11.2
pathogenic
GRCh38/hg38 5q11.2(chr5:53332485-57152396)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053283]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053283]|See cases [RCV000053283] Chr5:53332485..57152396 [GRCh38]
Chr5:52628315..56448223 [GRCh37]
Chr5:52664072..56483980 [NCBI36]
Chr5:5q11.2
uncertain significance
GRCh38/hg38 5q11.1-11.2(chr5:50462100-55862985)x1 copy number loss See cases [RCV000053451] Chr5:50462100..55862985 [GRCh38]
Chr5:49757934..55158813 [GRCh37]
Chr5:49793691..55194570 [NCBI36]
Chr5:5q11.1-11.2
pathogenic
NM_015360.4(SKIV2L2):c.134G>A (p.Gly45Glu) single nucleotide variant Malignant melanoma [RCV000061259] Chr5:55308147 [GRCh38]
Chr5:54603975 [GRCh37]
Chr5:54639732 [NCBI36]
Chr5:5q11.2
not provided
GRCh38/hg38 5p13.2-q12.1(chr5:35201559-61903141)x3 copy number gain See cases [RCV000137302] Chr5:35201559..61903141 [GRCh38]
Chr5:35201661..61198968 [GRCh37]
Chr5:35237418..61234725 [NCBI36]
Chr5:5p13.2-q12.1
pathogenic
GRCh38/hg38 5p12-q11.2(chr5:45566861-56506493)x3 copy number gain See cases [RCV000138021] Chr5:45566861..56506493 [GRCh38]
Chr5:45566963..55802320 [GRCh37]
Chr5:45602720..55838077 [NCBI36]
Chr5:5p12-q11.2
uncertain significance
GRCh38/hg38 5p15.33-q13.3(chr5:22149-74412725)x3 copy number gain See cases [RCV000138780] Chr5:22149..74412725 [GRCh38]
Chr5:22149..73708550 [GRCh37]
Chr5:75149..73744306 [NCBI36]
Chr5:5p15.33-q13.3
pathogenic
GRCh38/hg38 5q11.2(chr5:55028257-55939697)x3 copy number gain See cases [RCV000139251] Chr5:55028257..55939697 [GRCh38]
Chr5:54324085..55235525 [GRCh37]
Chr5:54359842..55271282 [NCBI36]
Chr5:5q11.2
uncertain significance
GRCh38/hg38 5q11.2(chr5:55241166-55322283)x3 copy number gain See cases [RCV000141269] Chr5:55241166..55322283 [GRCh38]
Chr5:54536994..54618111 [GRCh37]
Chr5:54572751..54653868 [NCBI36]
Chr5:5q11.2
uncertain significance
GRCh37/hg19 5p15.33-q35.3(chr5:113577-180719789) copy number gain See cases [RCV000510723] Chr5:113577..180719789 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
GRCh37/hg19 5q11.2(chr5:53784524-54985838) copy number loss Abnormal esophagus morphology [RCV000416715] Chr5:53784524..54985838 [GRCh37]
Chr5:5q11.2
likely benign
GRCh37/hg19 5p15.1-q35.2(chr5:17628741-176575720)x1 copy number loss See cases [RCV000511978] Chr5:17628741..176575720 [GRCh37]
Chr5:5p15.1-q35.2
pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:113577-180719789)x3 copy number gain See cases [RCV000512039] Chr5:113577..180719789 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
NM_015360.5(MTREX):c.2961T>A (p.Asp987Glu) single nucleotide variant not specified [RCV004299301] Chr5:55416122 [GRCh38]
Chr5:54711950 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.899A>G (p.His300Arg) single nucleotide variant not specified [RCV004333717] Chr5:55343448 [GRCh38]
Chr5:54639276 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1996G>A (p.Gly666Arg) single nucleotide variant not specified [RCV004320350] Chr5:55379139 [GRCh38]
Chr5:54674967 [GRCh37]
Chr5:5q11.2
uncertain significance
GRCh37/hg19 5q11.2(chr5:54635880-55019572)x3 copy number gain not provided [RCV000512842] Chr5:54635880..55019572 [GRCh37]
Chr5:5q11.2
likely benign
GRCh37/hg19 5p15.33-q35.3(chr5:13648-180905029)x3 copy number gain not provided [RCV000744317] Chr5:13648..180905029 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:25328-180693344)x3 copy number gain not provided [RCV000744323] Chr5:25328..180693344 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
Single allele deletion Neurodevelopmental disorder [RCV000787436] Chr5:14685137..149511942 [GRCh37]
Chr5:5p15.2-q32
uncertain significance
NM_015360.5(MTREX):c.57T>G (p.Thr19=) single nucleotide variant not provided [RCV000880145] Chr5:55308070 [GRCh38]
Chr5:54603898 [GRCh37]
Chr5:5q11.2
benign
GRCh37/hg19 5q11.2(chr5:54623265-54815203)x3 copy number gain not provided [RCV000847431] Chr5:54623265..54815203 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1781A>G (p.His594Arg) single nucleotide variant Marfanoid habitus and intellectual disability [RCV000850442] Chr5:55366846 [GRCh38]
Chr5:54662674 [GRCh37]
Chr5:5q11.2
uncertain significance
GRCh37/hg19 5q11.2(chr5:54527018-55436536)x3 copy number gain not provided [RCV000847477] Chr5:54527018..55436536 [GRCh37]
Chr5:5q11.2
uncertain significance
NC_000005.9:g.(?_52285299)_(56189507_?)del deletion not provided [RCV003107599] Chr5:52285299..56189507 [GRCh37]
Chr5:5q11.2
pathogenic
NM_015360.5(MTREX):c.1346A>G (p.Lys449Arg) single nucleotide variant not specified [RCV004292735] Chr5:55350944 [GRCh38]
Chr5:54646772 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1255A>G (p.Met419Val) single nucleotide variant not specified [RCV004305467] Chr5:55349587 [GRCh38]
Chr5:54645415 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2358A>G (p.Gln786=) single nucleotide variant not provided [RCV000946839] Chr5:55400298 [GRCh38]
Chr5:54696126 [GRCh37]
Chr5:5q11.2
benign
NM_015360.5(MTREX):c.32G>A (p.Ser11Asn) single nucleotide variant not specified [RCV004323832] Chr5:55308045 [GRCh38]
Chr5:54603873 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_003711.4(PLPP1):c.781G>C (p.Glu261Gln) single nucleotide variant not specified [RCV004080676] Chr5:55425280 [GRCh38]
Chr5:54721108 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2819A>C (p.Lys940Thr) single nucleotide variant not specified [RCV004274198] Chr5:55415980 [GRCh38]
Chr5:54711808 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.43G>A (p.Gly15Ser) single nucleotide variant not specified [RCV004272169] Chr5:55308056 [GRCh38]
Chr5:54603884 [GRCh37]
Chr5:5q11.2
likely benign
NM_003711.4(PLPP1):c.836C>T (p.Pro279Leu) single nucleotide variant not specified [RCV004248827] Chr5:55425225 [GRCh38]
Chr5:54721053 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.856A>G (p.Ile286Val) single nucleotide variant not specified [RCV004250460] Chr5:55343405 [GRCh38]
Chr5:54639233 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1273A>G (p.Ser425Gly) single nucleotide variant not specified [RCV004254012] Chr5:55349605 [GRCh38]
Chr5:54645433 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2372A>G (p.Lys791Arg) single nucleotide variant not specified [RCV004272527] Chr5:55400312 [GRCh38]
Chr5:54696140 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2054C>G (p.Pro685Arg) single nucleotide variant not specified [RCV004280810] Chr5:55387975 [GRCh38]
Chr5:54683803 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.239C>T (p.Pro80Leu) single nucleotide variant not specified [RCV004270374] Chr5:55322431 [GRCh38]
Chr5:54618259 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.281A>G (p.Asp94Gly) single nucleotide variant not specified [RCV004315593] Chr5:55324140 [GRCh38]
Chr5:54619968 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_003711.4(PLPP1):c.826A>T (p.Asn276Tyr) single nucleotide variant not specified [RCV004340268] Chr5:55425235 [GRCh38]
Chr5:54721063 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.172A>C (p.Asn58His) single nucleotide variant not specified [RCV004335320] Chr5:55322364 [GRCh38]
Chr5:54618192 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.119C>T (p.Ser40Phe) single nucleotide variant not specified [RCV004348930] Chr5:55308132 [GRCh38]
Chr5:54603960 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1482A>G (p.Arg494=) single nucleotide variant not provided [RCV003429637] Chr5:55353218 [GRCh38]
Chr5:54649046 [GRCh37]
Chr5:5q11.2
likely benign
NM_015360.5(MTREX):c.1992T>C (p.Asn664=) single nucleotide variant not provided [RCV003429638] Chr5:55379135 [GRCh38]
Chr5:54674963 [GRCh37]
Chr5:5q11.2
likely benign
NM_015360.5(MTREX):c.1999G>T (p.Asp667Tyr) single nucleotide variant not specified [RCV004509875] Chr5:55379142 [GRCh38]
Chr5:54674970 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2299C>G (p.Gln767Glu) single nucleotide variant not specified [RCV004509888] Chr5:55400239 [GRCh38]
Chr5:54696067 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2737G>C (p.Val913Leu) single nucleotide variant not specified [RCV004509906] Chr5:55410615 [GRCh38]
Chr5:54706443 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2825T>C (p.Ile942Thr) single nucleotide variant not specified [RCV004509920] Chr5:55415986 [GRCh38]
Chr5:54711814 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.890G>T (p.Cys297Phe) single nucleotide variant not specified [RCV004509947] Chr5:55343439 [GRCh38]
Chr5:54639267 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.109C>A (p.Pro37Thr) single nucleotide variant not specified [RCV004509829] Chr5:55308122 [GRCh38]
Chr5:54603950 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2257G>A (p.Val753Met) single nucleotide variant not specified [RCV004509884] Chr5:55397491 [GRCh38]
Chr5:54693319 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.3099T>G (p.Asp1033Glu) single nucleotide variant not specified [RCV004509925] Chr5:55424742 [GRCh38]
Chr5:54720570 [GRCh37]
Chr5:5q11.2
uncertain significance
GRCh37/hg19 5q11.1-11.2(chr5:49430268-57925870)x1 copy number loss not specified [RCV003986571] Chr5:49430268..57925870 [GRCh37]
Chr5:5q11.1-11.2
likely pathogenic
NM_015360.5(MTREX):c.1297G>A (p.Asp433Asn) single nucleotide variant not specified [RCV004509854] Chr5:55349629 [GRCh38]
Chr5:54645457 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1904A>G (p.Lys635Arg) single nucleotide variant not specified [RCV004509870] Chr5:55378407 [GRCh38]
Chr5:54674235 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2431A>T (p.Asn811Tyr) single nucleotide variant not specified [RCV004509896] Chr5:55400371 [GRCh38]
Chr5:54696199 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.869G>A (p.Arg290Gln) single nucleotide variant not specified [RCV004509944] Chr5:55343418 [GRCh38]
Chr5:54639246 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1145T>C (p.Met382Thr) single nucleotide variant not specified [RCV004509836] Chr5:55347049 [GRCh38]
Chr5:54642877 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2456A>G (p.Tyr819Cys) single nucleotide variant not specified [RCV004509900] Chr5:55400396 [GRCh38]
Chr5:54696224 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1606A>G (p.Ile536Val) single nucleotide variant not specified [RCV004509858] Chr5:55358645 [GRCh38]
Chr5:54654473 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2561G>A (p.Arg854His) single nucleotide variant not specified [RCV004509903] Chr5:55405504 [GRCh38]
Chr5:54701332 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2764C>T (p.Pro922Ser) single nucleotide variant not specified [RCV004509908] Chr5:55414194 [GRCh38]
Chr5:54710022 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.311T>G (p.Val104Gly) single nucleotide variant not specified [RCV004509931] Chr5:55324170 [GRCh38]
Chr5:54619998 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2098C>A (p.Leu700Met) single nucleotide variant not provided [RCV004547018] Chr5:55388019 [GRCh38]
Chr5:54683847 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1139T>G (p.Met380Arg) single nucleotide variant not specified [RCV004509833] Chr5:55347043 [GRCh38]
Chr5:54642871 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.169A>G (p.Thr57Ala) single nucleotide variant not specified [RCV004509863] Chr5:55322361 [GRCh38]
Chr5:54618189 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.277G>A (p.Ala93Thr) single nucleotide variant not specified [RCV004509912] Chr5:55324136 [GRCh38]
Chr5:54619964 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.3059A>C (p.Glu1020Ala) single nucleotide variant not specified [RCV004509923] Chr5:55422965 [GRCh38]
Chr5:54718793 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.739G>C (p.Ala247Pro) single nucleotide variant not specified [RCV004509939] Chr5:55341729 [GRCh38]
Chr5:54637557 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2252G>A (p.Arg751Gln) single nucleotide variant not specified [RCV004509881] Chr5:55397486 [GRCh38]
Chr5:54693314 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.901A>G (p.Lys301Glu) single nucleotide variant not specified [RCV004509952] Chr5:55343450 [GRCh38]
Chr5:54639278 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1091G>A (p.Arg364Gln) single nucleotide variant not specified [RCV004507361] Chr5:55345179 [GRCh38]
Chr5:54641007 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_003711.4(PLPP1):c.827A>G (p.Asn276Ser) single nucleotide variant not specified [RCV004506705] Chr5:55425234 [GRCh38]
Chr5:54721062 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.196G>A (p.Val66Ile) single nucleotide variant not specified [RCV004638547] Chr5:55322388 [GRCh38]
Chr5:54618216 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.133G>C (p.Gly45Arg) single nucleotide variant not specified [RCV004638548] Chr5:55308146 [GRCh38]
Chr5:54603974 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2056A>G (p.Asn686Asp) single nucleotide variant not specified [RCV004638544] Chr5:55387977 [GRCh38]
Chr5:54683805 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1090C>T (p.Arg364Trp) single nucleotide variant not specified [RCV004646815] Chr5:55345178 [GRCh38]
Chr5:54641006 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2432A>G (p.Asn811Ser) single nucleotide variant not specified [RCV004646816] Chr5:55400372 [GRCh38]
Chr5:54696200 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.1723C>T (p.Arg575Cys) single nucleotide variant not specified [RCV004646817] Chr5:55366788 [GRCh38]
Chr5:54662616 [GRCh37]
Chr5:5q11.2
uncertain significance
NM_015360.5(MTREX):c.2086G>C (p.Val696Leu) single nucleotide variant not specified [RCV004638545] Chr5:55388007 [GRCh38]
Chr5:54683835 [GRCh37]
Chr5:5q11.2
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2765
Count of miRNA genes:1112
Interacting mature miRNAs:1387
Transcripts:ENST00000230640, ENST00000502953, ENST00000503165, ENST00000504388, ENST00000504997, ENST00000505565, ENST00000506750, ENST00000508716, ENST00000518955, ENST00000545714
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407273292GWAS922268_Hbody height QTL GWAS922268 (human)3e-153body height (VT:0001253)body height (CMO:0000106)55542219455422195Human

Markers in Region
RH99030  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37554,712,217 - 54,712,342UniSTSGRCh37
Build 36554,747,974 - 54,748,099RGDNCBI36
Celera551,665,030 - 51,665,155RGD
Cytogenetic Map5q11.2UniSTS
HuRef551,685,193 - 51,685,318UniSTS
GeneMap99-GB4 RH Map5278.94UniSTS
RH76135  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37554,712,136 - 54,712,337UniSTSGRCh37
Build 36554,747,893 - 54,748,094RGDNCBI36
Celera551,664,949 - 51,665,150RGD
Cytogenetic Map5q11.2UniSTS
HuRef551,685,112 - 51,685,313UniSTS
G64173  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37554,665,348 - 54,665,648UniSTSGRCh37
Build 36554,701,105 - 54,701,405RGDNCBI36
Celera551,618,153 - 51,618,453RGD
Cytogenetic Map5q11.2UniSTS
HuRef551,638,309 - 51,638,609UniSTS
WI-15758  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37554,721,264 - 54,721,392UniSTSGRCh37
Build 36554,757,021 - 54,757,149RGDNCBI36
Celera551,674,081 - 51,674,209RGD
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map5q11UniSTS
HuRef551,694,244 - 51,694,372UniSTS
GeneMap99-GB4 RH Map5281.59UniSTS
Whitehead-RH Map5190.4UniSTS
D20S536E  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5q11.2UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_015360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC010480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC020728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK123505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC014669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC065258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC104996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC105291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC113509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX640789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D29641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA524147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HF584009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000230640   ⟹   ENSP00000230640
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl555,307,989 - 55,425,579 (+)Ensembl
Ensembl Acc Id: ENST00000502953
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl555,327,530 - 55,343,372 (+)Ensembl
Ensembl Acc Id: ENST00000503165
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl555,308,010 - 55,329,407 (+)Ensembl
Ensembl Acc Id: ENST00000504388
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl555,308,001 - 55,324,705 (+)Ensembl
Ensembl Acc Id: ENST00000504997
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl555,308,069 - 55,347,129 (+)Ensembl
Ensembl Acc Id: ENST00000505565   ⟹   ENSP00000422125
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl555,322,327 - 55,344,620 (+)Ensembl
Ensembl Acc Id: ENST00000506750   ⟹   ENSP00000425042
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl555,308,001 - 55,425,106 (+)Ensembl
Ensembl Acc Id: ENST00000508716   ⟹   ENSP00000426641
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl555,416,056 - 55,424,985 (+)Ensembl
Ensembl Acc Id: ENST00000518955
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl555,405,252 - 55,416,129 (+)Ensembl
RefSeq Acc Id: NM_015360   ⟹   NP_056175
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38555,307,989 - 55,425,579 (+)NCBI
GRCh37554,603,576 - 54,721,409 (+)RGD
Build 36554,639,373 - 54,756,562 (+)NCBI Archive
Celera551,556,391 - 51,674,226 (+)RGD
HuRef551,576,539 - 51,694,389 (+)RGD
CHM1_1554,607,444 - 54,725,302 (+)NCBI
T2T-CHM13v2.0556,135,296 - 56,252,888 (+)NCBI
Sequence:
RefSeq Acc Id: NP_056175   ⟸   NM_015360
- UniProtKB: Q8N5R0 (UniProtKB/Swiss-Prot),   Q6P170 (UniProtKB/Swiss-Prot),   Q6MZZ8 (UniProtKB/Swiss-Prot),   Q2M386 (UniProtKB/Swiss-Prot),   Q8TAG2 (UniProtKB/Swiss-Prot),   P42285 (UniProtKB/Swiss-Prot),   A8K6I4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000422125   ⟸   ENST00000505565
Ensembl Acc Id: ENSP00000425042   ⟸   ENST00000506750
Ensembl Acc Id: ENSP00000230640   ⟸   ENST00000230640
Ensembl Acc Id: ENSP00000426641   ⟸   ENST00000508716
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P42285-F1-model_v2 AlphaFold P42285 1-1042 view protein structure

Promoters
RGD ID:6802998
Promoter ID:HG_KWN:50131
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_015360,   NM_019030,   UC010IVW.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36554,638,521 - 54,639,862 (-)MPROMDB
RGD ID:6869618
Promoter ID:EPDNEW_H7974
Type:initiation region
Name:SKIV2L2_1
Description:Ski2 like RNA helicase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H7975  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38555,307,786 - 55,307,846EPDNEW
RGD ID:6869620
Promoter ID:EPDNEW_H7975
Type:initiation region
Name:SKIV2L2_2
Description:Ski2 like RNA helicase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H7974  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38555,308,001 - 55,308,061EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:18734 AgrOrtholog
COSMIC MTREX COSMIC
Ensembl Genes ENSG00000039123 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000230640 ENTREZGENE
  ENST00000230640.10 UniProtKB/Swiss-Prot
  ENST00000505565.5 UniProtKB/TrEMBL
  ENST00000506750.5 UniProtKB/TrEMBL
  ENST00000508716.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.3380.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.40.30.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000039123 GTEx
HGNC ID HGNC:18734 ENTREZGENE
Human Proteome Map MTREX Human Proteome Map
InterPro DEAD/DEAH_box_helicase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Helicase_ATP-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Helicase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MTR4-like_stalk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNA-DNA_Helicase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  rRNA_proc-arch_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ski2-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ski2_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:23517 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 23517 ENTREZGENE
OMIM 618122 OMIM
PANTHER ATP-DEPENDENT RNA AND DNA HELICASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EXOSOME RNA HELICASE MTR4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DEAD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DSHCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Helicase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MTR4-like_stalk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  rRNA_proc-arch UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134901921 PharmGKB
PIRSF Antiviral_helicase_SKI2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE HELICASE_ATP_BIND_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELICASE_CTER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DEXDc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DSHCT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HELICc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP P-loop containing nucleoside triphosphate hydrolases UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A8K6I4 ENTREZGENE, UniProtKB/TrEMBL
  D6REC7_HUMAN UniProtKB/TrEMBL
  H0Y8U3_HUMAN UniProtKB/TrEMBL
  H0YAC4_HUMAN UniProtKB/TrEMBL
  MTREX_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q2M386 ENTREZGENE
  Q3MHC9_HUMAN UniProtKB/TrEMBL
  Q6MZZ8 ENTREZGENE
  Q6P170 ENTREZGENE
  Q8N5R0 ENTREZGENE
  Q8TAG2 ENTREZGENE
UniProt Secondary Q2M386 UniProtKB/Swiss-Prot
  Q6MZZ8 UniProtKB/Swiss-Prot
  Q6P170 UniProtKB/Swiss-Prot
  Q8N5R0 UniProtKB/Swiss-Prot
  Q8TAG2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-11-28 MTREX  Mtr4 exosome RNA helicase  SKIV2L2  Ski2 like RNA helicase 2  Symbol and/or name change 5135510 APPROVED
2016-01-12 SKIV2L2  Ski2 like RNA helicase 2    superkiller viralicidic activity 2-like 2 (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED