MARCHF7 (membrane associated ring-CH-type finger 7) - Rat Genome Database

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Gene: MARCHF7 (membrane associated ring-CH-type finger 7) Homo sapiens
Analyze
Symbol: MARCHF7
Name: membrane associated ring-CH-type finger 7
RGD ID: 1603971
HGNC Page HGNC:17393
Description: Enables MDM2/MDM4 family protein binding activity; ubiquitin conjugating enzyme binding activity; and ubiquitin protein ligase activity. Involved in several processes, including negative regulation of signal transduction by p53 class mediator; protein monoubiquitination; and regulation of protein metabolic process. Located in several cellular components, including ciliary basal body; cytosol; and nucleus. Is active in centrosome.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AXO; AXOT; axotrophin; DKFZp586F1122; E3 ubiquitin-protein ligase MARCH7; E3 ubiquitin-protein ligase MARCHF7; MARCH-VII; MARCH7; membrane associated ring finger 7; membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase; membrane-associated RING finger protein 7; membrane-associated RING-CH protein VII; RING finger protein 177; RING-type E3 ubiquitin transferase MARCH7; RING-type E3 ubiquitin transferase MARCHF7; RNF177
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382159,712,506 - 159,771,027 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2159,712,457 - 159,771,027 (+)EnsemblGRCh38hg38GRCh38
GRCh372160,569,017 - 160,627,538 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362160,277,256 - 160,333,330 (+)NCBINCBI36Build 36hg18NCBI36
Celera2154,180,871 - 154,236,930 (+)NCBICelera
Cytogenetic Map2q24.2NCBI
HuRef2152,452,965 - 152,508,987 (+)NCBIHuRef
CHM1_12160,575,406 - 160,631,457 (+)NCBICHM1_1
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MARCHF7Humanautistic disorder  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Autistic behaviorClinVarPMID:18414213

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MARCHF7Human(+)-schisandrin B multiple interactionsISOMarchf7 (Rattus norvegicus)6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of MARCHF7 mRNA]CTDPMID:31150632
MARCHF7Human(-)-demecolcine increases expressionEXP 6480464Demecolcine results in increased expression of MARCHF7 mRNACTDPMID:23649840
MARCHF7Human(1->4)-beta-D-glucan multiple interactionsISOMarchf7 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of MARCHF7 mRNACTDPMID:36331819
MARCHF7Human1,2-dimethylhydrazine decreases expressionISOMarchf7 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of MARCHF7 mRNACTDPMID:22206623
MARCHF7Human17alpha-ethynylestradiol increases expressionISOMarchf7 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of MARCHF7 mRNACTDPMID:17942748
MARCHF7Human17beta-estradiol affects expressionISOMarchf7 (Rattus norvegicus)6480464Estradiol affects the expression of MARCHF7 mRNACTDPMID:32145629
MARCHF7Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOMarchf7 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of MARCHF7 mRNACTDPMID:33387578
MARCHF7Human2,4-dinitrotoluene affects expressionISOMarchf7 (Rattus norvegicus)64804642 and 4-dinitrotoluene affects the expression of MARCHF7 mRNACTDPMID:21346803
MARCHF7Human4,4'-diaminodiphenylmethane decreases expressionISOMarchf7 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of MARCHF7 mRNACTDPMID:18648102
MARCHF7Human4,4'-sulfonyldiphenol decreases expressionISOMarchf7 (Mus musculus)6480464bisphenol S results in decreased expression of MARCHF7 mRNACTDPMID:39298647
MARCHF7Humanacetamide decreases expressionISOMarchf7 (Rattus norvegicus)6480464acetamide results in decreased expression of MARCHF7 mRNACTDPMID:31881176
MARCHF7Humanaflatoxin B1 increases expressionEXP 6480464Aflatoxin B1 results in increased expression of MARCHF7 mRNACTDPMID:27153756
MARCHF7Humanaflatoxin B1 increases expressionISOMarchf7 (Mus musculus)6480464Aflatoxin B1 results in increased expression of MARCHF7 mRNACTDPMID:19770486
MARCHF7Humanantirheumatic drug affects expressionEXP 6480464Antirheumatic Agents affects the expression of MARCHF7 mRNACTDPMID:24449571
MARCHF7Humanaristolochic acid A decreases expressionEXP 6480464aristolochic acid I results in decreased expression of MARCHF7 mRNACTDPMID:33212167
MARCHF7Humanbenzo[a]pyrene increases expressionISOMarchf7 (Rattus norvegicus)6480464Benzo(a)pyrene results in increased expression of MARCHF7 mRNACTDPMID:21839799
MARCHF7Humanbenzo[a]pyrene decreases methylationEXP 6480464Benzo(a)pyrene results in decreased methylation of MARCHF7 5' UTRCTDPMID:27901495
MARCHF7Humanbenzo[a]pyrene increases expressionISOMarchf7 (Mus musculus)6480464Benzo(a)pyrene results in increased expression of MARCHF7 mRNACTDPMID:22228805
MARCHF7Humanbenzo[a]pyrene diol epoxide I decreases expressionEXP 64804647 more ...CTDPMID:19150397
MARCHF7Humanbisphenol A increases expressionISOMarchf7 (Rattus norvegicus)6480464bisphenol A results in increased expression of MARCHF7 mRNACTDPMID:25181051 and PMID:30816183

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Biological Process
1 to 15 of 15 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MARCHF7Humannegative regulation of cilium assembly involved_inIDA 150520179 PMID:25552655UniProtPMID:25552655
MARCHF7Humannegative regulation of DNA damage response, signal transduction by p53 class mediator involved_inIMP 150520179 PMID:29295817UniProtPMID:29295817
MARCHF7Humannegative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator involved_inIMP 150520179 PMID:29295817UniProtPMID:29295817
MARCHF7Humannegative regulation of proteasomal protein catabolic process involved_inIMP 150520179 PMID:29295817UniProtPMID:29295817
MARCHF7Humannegative regulation of protein autoubiquitination involved_inIMP 150520179 PMID:29295817UniProtPMID:29295817
MARCHF7Humannegative regulation of T cell proliferation acts_upstream_of_or_withinIEAUniProtKB:Q9WV66 and ensembl:ENSMUSP00000099809150520179 EnsemblGO_REF:0000107
MARCHF7Humanpositive regulation of cell population proliferation involved_inIMP 150520179 PMID:29295817UniProtPMID:29295817
MARCHF7Humanpositive regulation of protein polyubiquitination involved_inIMP 150520179 PMID:29295817UniProtPMID:29295817
MARCHF7Humanprotein autoubiquitination involved_inISSUniProtKB:Q9WV66150520179 UniProtGO_REF:0000024
MARCHF7Humanprotein autoubiquitination involved_inIBAMGI:1931053 and PANTHER:PTN000375252150520179 GO_CentralGO_REF:0000033
MARCHF7Humanprotein autoubiquitination involved_inIEAUniProtKB:Q9WV66 and ensembl:ENSMUSP00000099809150520179 EnsemblGO_REF:0000107
MARCHF7Humanprotein monoubiquitination involved_inIDA 150520179 PMID:24905733CACAOPMID:24905733
MARCHF7Humanprotein stabilization involved_inIMP 150520179 PMID:29295817UniProtPMID:29295817
MARCHF7Humanprotein ubiquitination involved_inIEAUniPathway:UPA00143150520179 UniProtGO_REF:0000041
MARCHF7Humanregulation of tolerance induction acts_upstream_of_or_withinIEAUniProtKB:Q9WV66 and ensembl:ENSMUSP00000099809150520179 EnsemblGO_REF:0000107
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Cellular Component
1 to 14 of 14 rows

  
Object Symbol
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Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MARCHF7Humancentrosome is_active_inIDA 150520179 PMID:25552655UniProtPMID:25552655
MARCHF7Humanciliary basal body located_inIDA 150520179 HPAGO_REF:0000052
MARCHF7Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
MARCHF7Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
MARCHF7Humancytosol located_inIEAUniProtKB:Q9WV66 and ensembl:ENSMUSP00000099809150520179 EnsemblGO_REF:0000107
MARCHF7Humancytosol located_inIDA 150520179 HPAGO_REF:0000052
MARCHF7Humancytosol located_inISSUniProtKB:Q9WV66150520179 UniProtGO_REF:0000024
MARCHF7Humannucleus located_inISSUniProtKB:Q9WV66150520179 UniProtGO_REF:0000024
MARCHF7Humannucleus is_active_inIBAMGI:1931053 more ...150520179 GO_CentralGO_REF:0000033
MARCHF7Humannucleus located_inIEAUniProtKB:Q9WV66 and ensembl:ENSMUSP00000099809150520179 EnsemblGO_REF:0000107
MARCHF7Humannucleus located_inIDA 150520179 PMID:29295817UniProtPMID:29295817
MARCHF7Humanplasma membrane located_inIEAUniProtKB:Q9WV66 and ensembl:ENSMUSP00000099809150520179 EnsemblGO_REF:0000107
MARCHF7Humanplasma membrane located_inIDA 150520179 HPAGO_REF:0000052
MARCHF7Humanplasma membrane located_inISSUniProtKB:Q9WV66150520179 UniProtGO_REF:0000024
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Molecular Function
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
Notes
Source
Original Reference(s)
MARCHF7Humanenzyme binding enablesIEAUniProtKB:Q9WV66 and ensembl:ENSMUSP00000099809150520179 EnsemblGO_REF:0000107
MARCHF7HumanMDM2/MDM4 family protein binding enablesIPIUniProtKB:Q00987150520179 PMID:29295817UniProtPMID:29295817
MARCHF7Humanmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
MARCHF7Humanprotein binding enablesIPIUniProtKB:Q15691150520179 PMID:35271311IntActPMID:35271311
MARCHF7Humanprotein binding enablesIPIUniProtKB:O75031 more ...150520179 PMID:32296183IntActPMID:32296183
MARCHF7Humantransferase activity enablesIEAUniProtKB-KW:KW-0808150520179 UniProtGO_REF:0000043
MARCHF7Humanubiquitin binding enablesIEAUniProtKB:Q9WV66 and ensembl:ENSMUSP00000099809150520179 EnsemblGO_REF:0000107
MARCHF7Humanubiquitin binding enablesIBAMGI:1931053 and PANTHER:PTN000375252150520179 GO_CentralGO_REF:0000033
MARCHF7Humanubiquitin binding enablesISSUniProtKB:Q9WV66150520179 UniProtGO_REF:0000024
MARCHF7Humanubiquitin conjugating enzyme binding enablesIPIUniProtKB:P61086 and UniProtKB:P61088150520179 PMID:18410486UniProtPMID:18410486
MARCHF7Humanubiquitin conjugating enzyme binding enablesIBAPANTHER:PTN000375252 and UniProtKB:Q9H992150520179 GO_CentralGO_REF:0000033
MARCHF7Humanubiquitin protein ligase activity enablesIDA 150520179 PMID:25552655UniProtPMID:25552655
MARCHF7Humanzinc ion binding enablesIEAInterPro:IPR011016150520179 InterProGO_REF:0000002
MARCHF7Humanzinc ion binding enablesIEAUniProtKB-KW:KW-0863150520179 UniProtGO_REF:0000043
1 to 14 of 14 rows

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MARCHF7HumanAutistic behavior  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Autistic behaviorClinVarPMID:18414213

#
Reference Title
Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8125298   PMID:12477932   PMID:14702039   PMID:14722266   PMID:15489334   PMID:15670816   PMID:15815621   PMID:16344560   PMID:16713569   PMID:16868077   PMID:17161353   PMID:18410486  
PMID:18654987   PMID:19549727   PMID:19901269   PMID:21873635   PMID:22493164   PMID:22544753   PMID:23105109   PMID:24905733   PMID:25552655   PMID:25594175   PMID:26186194   PMID:26673895  
PMID:26972000   PMID:27302477   PMID:28498859   PMID:28514442   PMID:29295817   PMID:30008934   PMID:31006800   PMID:31073040   PMID:32296183   PMID:32694731   PMID:33729124   PMID:33729478  
PMID:33961781   PMID:34611473   PMID:35271311   PMID:36538041   PMID:36583798   PMID:36897256   PMID:37314216   PMID:37317656   PMID:37337032   PMID:37915253  



MARCHF7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382159,712,506 - 159,771,027 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2159,712,457 - 159,771,027 (+)EnsemblGRCh38hg38GRCh38
GRCh372160,569,017 - 160,627,538 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362160,277,256 - 160,333,330 (+)NCBINCBI36Build 36hg18NCBI36
Celera2154,180,871 - 154,236,930 (+)NCBICelera
Cytogenetic Map2q24.2NCBI
HuRef2152,452,965 - 152,508,987 (+)NCBIHuRef
CHM1_12160,575,406 - 160,631,457 (+)NCBICHM1_1
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBIT2T-CHM13v2.0
Marchf7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39260,040,086 - 60,079,555 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl260,040,231 - 60,081,020 (+)EnsemblGRCm39 Ensembl
GRCm38260,209,936 - 60,248,385 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl260,209,887 - 60,250,676 (+)EnsemblGRCm38mm10GRCm38
MGSCv37260,047,993 - 60,086,442 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36260,010,775 - 60,049,224 (+)NCBIMGSCv36mm8
Celera261,923,924 - 61,943,391 (+)NCBICelera
Cytogenetic Map2C1.1NCBI
cM Map234.46NCBI
Marchf7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8365,090,640 - 65,128,768 (+)NCBIGRCr8
mRatBN7.2344,680,229 - 44,720,172 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl344,681,632 - 44,720,168 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx348,047,948 - 48,080,007 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0356,631,520 - 56,663,579 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0354,396,643 - 54,428,707 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0346,284,961 - 46,325,230 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl346,286,712 - 46,324,057 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0351,392,847 - 51,433,354 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4341,922,568 - 41,954,630 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1341,818,939 - 41,851,002 (+)NCBI
Celera342,729,497 - 42,761,557 (+)NCBICelera
Cytogenetic Map3q21NCBI
Marchf7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544913,835,811 - 13,859,699 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544913,834,561 - 13,875,864 (-)NCBIChiLan1.0ChiLan1.0
MARCHF7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21362,403,498 - 62,459,350 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B62,418,484 - 62,474,327 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B47,004,211 - 47,059,901 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B164,377,538 - 164,432,907 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B164,377,605 - 164,432,907 (+)Ensemblpanpan1.1panPan2
MARCHF7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1365,481,449 - 5,533,139 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl365,481,456 - 5,531,957 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha365,619,700 - 5,671,174 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0365,603,860 - 5,655,631 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl365,603,884 - 5,657,936 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1365,621,952 - 5,673,466 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0365,664,667 - 5,716,347 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0365,707,592 - 5,759,332 (+)NCBIUU_Cfam_GSD_1.0
Marchf7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303122,600,884 - 122,651,472 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646918,962,655 - 19,017,100 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646918,966,239 - 19,016,829 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MARCHF7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1566,649,049 - 66,699,950 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11566,649,363 - 66,699,647 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21573,887,325 - 73,935,314 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MARCHF7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11045,121,817 - 45,178,547 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1045,121,538 - 45,177,271 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040154,403,774 - 154,459,270 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Marchf7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247325,889,181 - 5,928,471 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in MARCHF7
66 total Variants

1 to 10 of 77 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 2q24.1-24.3(chr2:158382388-166605758)x1 copy number loss See cases [RCV000051003] Chr2:158382388..166605758 [GRCh38]
Chr2:159238900..167462268 [GRCh37]
Chr2:158947146..167170514 [NCBI36]
Chr2:2q24.1-24.3
pathogenic
GRCh38/hg38 2q24.1-24.3(chr2:154366788-167048902)x3 copy number gain See cases [RCV000052950] Chr2:154366788..167048902 [GRCh38]
Chr2:155223300..167905412 [GRCh37]
Chr2:154931546..167613658 [NCBI36]
Chr2:2q24.1-24.3
pathogenic
GRCh38/hg38 2q23.1-24.3(chr2:148917286-163204623)x1 copy number loss See cases [RCV000054093] Chr2:148917286..163204623 [GRCh38]
Chr2:149674855..164061133 [GRCh37]
Chr2:149391325..163769379 [NCBI36]
Chr2:2q23.1-24.3
pathogenic
GRCh38/hg38 2q24.1-31.1(chr2:154294042-175989372)x3 copy number gain See cases [RCV000142286] Chr2:154294042..175989372 [GRCh38]
Chr2:155150555..176854100 [GRCh37]
Chr2:154858801..176562346 [NCBI36]
Chr2:2q24.1-31.1
pathogenic
GRCh37/hg19 2q24.1-31.3(chr2:156489430-182921298)x3 copy number gain See cases [RCV000239848] Chr2:156489430..182921298 [GRCh37]
Chr2:2q24.1-31.3
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 copy number gain not provided [RCV000752802] Chr2:14238..243048760 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) copy number gain See cases [RCV000512056] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 copy number gain See cases [RCV000511212] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2q12.1-24.3(chr2:104172062-168223828)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626436] Chr2:104172062..168223828 [GRCh37]
Chr2:2q12.1-24.3
drug response
NM_001282805.2(MARCHF7):c.757A>G (p.Ile253Val) single nucleotide variant not specified [RCV004309478] Chr2:159748047 [GRCh38]
Chr2:160604558 [GRCh37]
Chr2:2q24.2
uncertain significance
1 to 10 of 77 rows

Predicted Target Of
Summary Value
Count of predictions:1730
Count of miRNA genes:700
Interacting mature miRNAs:819
Transcripts:ENST00000259050, ENST00000409175, ENST00000409591, ENST00000420397, ENST00000421037, ENST00000461582, ENST00000473749, ENST00000478396, ENST00000539065
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 20 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
406977121GWAS626097_Hneutrophil count, basophil count QTL GWAS626097 (human)1e-12basophil quantity (VT:0002607)blood granulocyte count (CMO:0000111)2159712765159712766Human
597167736GWAS1263810_Haspartate aminotransferase measurement QTL GWAS1263810 (human)8e-10aspartate aminotransferase measurementblood aspartate aminotransferase activity level (CMO:0000580)2159744239159744240Human
407256934GWAS905910_Hblood protein measurement QTL GWAS905910 (human)5e-23blood protein measurement2159745359159745360Human
407006691GWAS655667_Hmean corpuscular hemoglobin QTL GWAS655667 (human)2e-09mean corpuscular hemoglobinmean corpuscular hemoglobin (CMO:0000290)2159736378159736379Human
597224441GWAS1320515_Haspartate aminotransferase measurement QTL GWAS1320515 (human)2e-09aspartate aminotransferase measurementblood aspartate aminotransferase activity level (CMO:0000580)2159744239159744240Human
597103059GWAS1199133_Hplatelet crit QTL GWAS1199133 (human)5e-50platelet quantity (VT:0003179)plateletcrit (CMO:0001349)2159748003159748004Human
597601755GWAS1658615_Hmonocyte count QTL GWAS1658615 (human)1e-40monocyte quantity (VT:0000223)blood monocyte count (CMO:0000032)2159712765159712766Human
597208304GWAS1304378_Hbirth weight QTL GWAS1304378 (human)1e-08birth weightneonatal body weight (CMO:0002079)2159712765159712766Human
597171410GWAS1267484_Hprotein measurement QTL GWAS1267484 (human)1e-70protein measurement2159745420159745421Human
597171411GWAS1267485_Hprotein measurement QTL GWAS1267485 (human)7e-31protein measurement2159713180159713181Human

1 to 10 of 20 rows
D2S1731E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372160,622,976 - 160,623,191UniSTSGRCh37
Build 362160,331,222 - 160,331,437RGDNCBI36
Celera2154,234,822 - 154,235,037RGD
Cytogenetic Map2q24.2UniSTS
HuRef2152,506,879 - 152,507,094UniSTS
AXOT_710  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372160,624,371 - 160,625,143UniSTSGRCh37
Build 362160,332,617 - 160,333,389RGDNCBI36
Celera2154,236,217 - 154,236,989RGD
HuRef2152,508,274 - 152,509,046UniSTS
RH77955  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372160,570,991 - 160,571,141UniSTSGRCh37
Build 362160,279,237 - 160,279,387RGDNCBI36
Celera2154,182,852 - 154,183,002RGD
Cytogenetic Map2q24.2UniSTS
HuRef2152,454,946 - 152,455,096UniSTS
NCBI RH Map21124.7UniSTS
RH70502  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372160,625,222 - 160,625,377UniSTSGRCh37
Build 362160,333,468 - 160,333,623RGDNCBI36
Celera2154,237,068 - 154,237,223RGD
Cytogenetic Map2qUniSTS
Cytogenetic Map2q24.2UniSTS
HuRef2152,509,125 - 152,509,280UniSTS
GeneMap99-GB4 RH Map2529.49UniSTS
G20298  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372160,622,997 - 160,623,150UniSTSGRCh37
Build 362160,331,243 - 160,331,396RGDNCBI36
Celera2154,234,843 - 154,234,996RGD
Cytogenetic Map2q24.2UniSTS
HuRef2152,506,900 - 152,507,053UniSTS
A005L03  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372160,622,997 - 160,623,150UniSTSGRCh37
Build 362160,331,243 - 160,331,396RGDNCBI36
Celera2154,234,843 - 154,234,996RGD
Cytogenetic Map2q24.2UniSTS
HuRef2152,506,900 - 152,507,053UniSTS
GeneMap99-GB4 RH Map2529.49UniSTS
RH69485  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372160,592,006 - 160,592,128UniSTSGRCh37
Build 362160,300,252 - 160,300,374RGDNCBI36
Celera2154,203,853 - 154,203,975RGD
Cytogenetic Map2q24.2UniSTS
HuRef2152,475,934 - 152,476,056UniSTS
GeneMap99-GB4 RH Map2529.49UniSTS
A007L02  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372160,625,397 - 160,625,561UniSTSGRCh37
Build 362160,333,643 - 160,333,807RGDNCBI36
Celera2154,237,243 - 154,237,407RGD
Cytogenetic Map2qUniSTS
Cytogenetic Map2q24.2UniSTS
HuRef2152,509,300 - 152,509,464UniSTS
GeneMap99-GB4 RH Map2527.62UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1


1 to 30 of 93 rows
RefSeq Transcripts NM_001282805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001282806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001282807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001376255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_022826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_164792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 93 rows

Ensembl Acc Id: ENST00000259050   ⟹   ENSP00000259050
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2159,712,499 - 159,771,027 (+)Ensembl
Ensembl Acc Id: ENST00000409175   ⟹   ENSP00000386830
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2159,712,506 - 159,771,027 (+)Ensembl
Ensembl Acc Id: ENST00000409591   ⟹   ENSP00000387238
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2159,733,965 - 159,767,409 (+)Ensembl
Ensembl Acc Id: ENST00000420397   ⟹   ENSP00000391493
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2159,752,490 - 159,767,960 (+)Ensembl
Ensembl Acc Id: ENST00000421037   ⟹   ENSP00000392862
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2159,712,507 - 159,743,211 (+)Ensembl
Ensembl Acc Id: ENST00000461582
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2159,745,770 - 159,752,525 (+)Ensembl
Ensembl Acc Id: ENST00000473749
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2159,712,523 - 159,748,126 (+)Ensembl
Ensembl Acc Id: ENST00000478396
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2159,759,292 - 159,767,850 (+)Ensembl
Ensembl Acc Id: ENST00000539065   ⟹   ENSP00000442992
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2159,712,457 - 159,768,583 (+)Ensembl
RefSeq Acc Id: NM_001282805   ⟹   NP_001269734
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
HuRef2152,452,923 - 152,508,997 (+)NCBI
CHM1_12160,575,364 - 160,631,467 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001282806   ⟹   NP_001269735
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,583 (+)NCBI
HuRef2152,452,923 - 152,508,997 (+)NCBI
CHM1_12160,575,364 - 160,631,467 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,951 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001282807   ⟹   NP_001269736
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,733,964 - 159,771,027 (+)NCBI
HuRef2152,452,923 - 152,508,997 (+)NCBI
CHM1_12160,596,799 - 160,631,467 (+)NCBI
T2T-CHM13v2.02160,191,320 - 160,228,395 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376234   ⟹   NP_001363163
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376235   ⟹   NP_001363164
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376236   ⟹   NP_001363165
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376237   ⟹   NP_001363166
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376238   ⟹   NP_001363167
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376239   ⟹   NP_001363168
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376240   ⟹   NP_001363169
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376241   ⟹   NP_001363170
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376242   ⟹   NP_001363171
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376243   ⟹   NP_001363172
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376244   ⟹   NP_001363173
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376245   ⟹   NP_001363174
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376246   ⟹   NP_001363175
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376247   ⟹   NP_001363176
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376248   ⟹   NP_001363177
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376249   ⟹   NP_001363178
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376250   ⟹   NP_001363179
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376251   ⟹   NP_001363180
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376252   ⟹   NP_001363181
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376253   ⟹   NP_001363182
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376254   ⟹   NP_001363183
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001376255   ⟹   NP_001363184
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NM_022826   ⟹   NP_073737
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
GRCh372160,568,980 - 160,625,084 (+)NCBI
Build 362160,277,256 - 160,333,330 (+)NCBI Archive
Celera2154,180,871 - 154,236,930 (+)RGD
HuRef2152,452,923 - 152,508,997 (+)NCBI
CHM1_12160,575,364 - 160,631,467 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
Sequence:
RefSeq Acc Id: NR_164789
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NR_164790
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NR_164791
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NR_164792
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NR_164793
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NR_164794
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: NR_164795
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,768,573 (+)NCBI
T2T-CHM13v2.02160,169,869 - 160,225,941 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017004721   ⟹   XP_016860210
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047445508   ⟹   XP_047301464
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445511   ⟹   XP_047301467
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445513   ⟹   XP_047301469
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445514   ⟹   XP_047301470
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,713,050 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445515   ⟹   XP_047301471
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,713,050 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445516   ⟹   XP_047301472
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445517   ⟹   XP_047301473
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445518   ⟹   XP_047301474
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445519   ⟹   XP_047301475
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445520   ⟹   XP_047301476
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445521   ⟹   XP_047301477
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445523   ⟹   XP_047301479
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,713,050 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445524   ⟹   XP_047301480
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445525   ⟹   XP_047301481
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445526   ⟹   XP_047301482
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445527   ⟹   XP_047301483
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445528   ⟹   XP_047301484
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445529   ⟹   XP_047301485
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_047445530   ⟹   XP_047301486
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,771,027 (+)NCBI
RefSeq Acc Id: XM_054343403   ⟹   XP_054199378
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343404   ⟹   XP_054199379
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343405   ⟹   XP_054199380
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343406   ⟹   XP_054199381
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,170,482 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343407   ⟹   XP_054199382
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343408   ⟹   XP_054199383
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343409   ⟹   XP_054199384
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343410   ⟹   XP_054199385
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343411   ⟹   XP_054199386
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343412   ⟹   XP_054199387
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343413   ⟹   XP_054199388
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,170,135 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343414   ⟹   XP_054199389
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343415   ⟹   XP_054199390
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343416   ⟹   XP_054199391
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343417   ⟹   XP_054199392
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343418   ⟹   XP_054199393
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343419   ⟹   XP_054199394
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343420   ⟹   XP_054199395
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
RefSeq Acc Id: XM_054343421   ⟹   XP_054199396
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02160,169,869 - 160,228,395 (+)NCBI
1 to 30 of 85 rows
Protein RefSeqs NP_001269734 (Get FASTA)   NCBI Sequence Viewer  
  NP_001269735 (Get FASTA)   NCBI Sequence Viewer  
  NP_001269736 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363163 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363164 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363165 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363166 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363167 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363168 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363169 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363170 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363171 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363172 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363173 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363174 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363175 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363176 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363177 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363178 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363179 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363180 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363181 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363182 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363183 (Get FASTA)   NCBI Sequence Viewer  
  NP_001363184 (Get FASTA)   NCBI Sequence Viewer  
  NP_073737 (Get FASTA)   NCBI Sequence Viewer  
  XP_016860210 (Get FASTA)   NCBI Sequence Viewer  
  XP_047301464 (Get FASTA)   NCBI Sequence Viewer  
  XP_047301467 (Get FASTA)   NCBI Sequence Viewer  
  XP_047301469 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 85 rows
1 to 5 of 71 rows
1 to 5 of 71 rows
RefSeq Acc Id: NP_073737   ⟸   NM_022826
- Peptide Label: isoform a
- UniProtKB: Q53GQ1 (UniProtKB/Swiss-Prot),   D3DPB0 (UniProtKB/Swiss-Prot),   B7Z7P5 (UniProtKB/Swiss-Prot),   A8K9X1 (UniProtKB/Swiss-Prot),   Q9BTR9 (UniProtKB/Swiss-Prot),   Q9H992 (UniProtKB/Swiss-Prot),   B7ZAR7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001269734   ⟸   NM_001282805
- Peptide Label: isoform a
- UniProtKB: Q53GQ1 (UniProtKB/Swiss-Prot),   D3DPB0 (UniProtKB/Swiss-Prot),   B7Z7P5 (UniProtKB/Swiss-Prot),   A8K9X1 (UniProtKB/Swiss-Prot),   Q9BTR9 (UniProtKB/Swiss-Prot),   Q9H992 (UniProtKB/Swiss-Prot),   B7ZAR7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001269735   ⟸   NM_001282806
- Peptide Label: isoform b
- UniProtKB: B7Z5K0 (UniProtKB/TrEMBL),   F5H6W4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001269736   ⟸   NM_001282807
- Peptide Label: isoform c
- UniProtKB: B7ZAR7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016860210   ⟸   XM_017004721
- Peptide Label: isoform X4
- UniProtKB: F5H6W4 (UniProtKB/TrEMBL),   B7Z5K0 (UniProtKB/TrEMBL)
- Sequence:
RING-CH-type

Name Modeler Protein Id AA Range Protein Structure
AF-Q9H992-F1-model_v2 AlphaFold Q9H992 1-704 view protein structure

RGD ID:6861832
Promoter ID:EPDNEW_H4080
Type:initiation region
Name:MARCH7_3
Description:membrane associated ring-CH-type finger 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H4074  EPDNEW_H4082  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,261 - 159,712,321EPDNEW
RGD ID:6861836
Promoter ID:EPDNEW_H4082
Type:initiation region
Name:MARCH7_1
Description:membrane associated ring-CH-type finger 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H4074  EPDNEW_H4080  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382159,712,506 - 159,712,566EPDNEW
RGD ID:6797124
Promoter ID:HG_KWN:35578
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000255040,   OTTHUMT00000333703,   OTTHUMT00000333704,   OTTHUMT00000333764,   OTTHUMT00000333765,   UC002UAU.1,   UC002UAW.1,   UC010FOQ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362160,277,161 - 160,277,917 (-)MPROMDB
RGD ID:6797782
Promoter ID:HG_KWN:35579
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:ENST00000409591,   UC010FOR.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362160,298,066 - 160,298,566 (+)MPROMDB
RGD ID:6797778
Promoter ID:HG_KWN:35581
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:UC002UAY.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362160,312,676 - 160,313,176 (+)MPROMDB
RGD ID:6797779
Promoter ID:HG_KWN:35582
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000333762
Position:
Human AssemblyChrPosition (strand)Source
Build 362160,317,099 - 160,317,599 (+)MPROMDB
RGD ID:6797780
Promoter ID:HG_KWN:35583
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000333763,   UC002UAZ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362160,323,436 - 160,323,936 (+)MPROMDB


1 to 40 of 43 rows
Database
Acc Id
Source(s)
COSMIC MARCHF7 COSMIC
Ensembl Genes ENSG00000136536 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000259050 ENTREZGENE
  ENST00000259050.8 UniProtKB/Swiss-Prot
  ENST00000409175 ENTREZGENE
  ENST00000409175.6 UniProtKB/Swiss-Prot
  ENST00000409591 ENTREZGENE
  ENST00000409591.5 UniProtKB/Swiss-Prot
  ENST00000539065 ENTREZGENE
Gene3D-CATH 3.30.40.10 UniProtKB/Swiss-Prot
GTEx ENSG00000136536 GTEx
HGNC ID HGNC:17393 ENTREZGENE
Human Proteome Map MARCHF7 Human Proteome Map
InterPro RING-CH-type_E3_ubiq-ligase UniProtKB/Swiss-Prot
  Znf_RING-CH UniProtKB/Swiss-Prot
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot
KEGG Report hsa:64844 UniProtKB/Swiss-Prot
NCBI Gene 64844 ENTREZGENE
OMIM 613334 OMIM
PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCHF7 UniProtKB/Swiss-Prot
  MARCH7/10 E3 UBIQUITIN PROTEIN LIGASE FAMILY MEMBER UniProtKB/Swiss-Prot
Pfam RINGv UniProtKB/Swiss-Prot
PharmGKB PA166351954 PharmGKB
PROSITE ZF_RING_CH UniProtKB/Swiss-Prot
SMART RINGv UniProtKB/Swiss-Prot
Superfamily-SCOP RING/U-box UniProtKB/Swiss-Prot
UniProt A8K9X1 ENTREZGENE
  B7Z5K0 ENTREZGENE, UniProtKB/TrEMBL
  B7Z7P5 ENTREZGENE
  B7ZAR7 ENTREZGENE, UniProtKB/TrEMBL
  C9J159_HUMAN UniProtKB/TrEMBL
  D3DPB0 ENTREZGENE
  F5H6W4 ENTREZGENE, UniProtKB/TrEMBL
  H7BZU7_HUMAN UniProtKB/TrEMBL
  MARH7_HUMAN UniProtKB/Swiss-Prot
  Q53GQ1 ENTREZGENE
  Q9BTR9 ENTREZGENE
  Q9H992 ENTREZGENE
UniProt Secondary A8K9X1 UniProtKB/Swiss-Prot
  B7Z7P5 UniProtKB/Swiss-Prot
1 to 40 of 43 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-07-16 MARCHF7  membrane associated ring-CH-type finger 7  MARCH7  membrane associated ring-CH-type finger 7  Symbol and/or name change 5135510 APPROVED
2015-12-01 MARCH7  membrane associated ring-CH-type finger 7  MARCH7  membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase  Symbol and/or name change 5135510 APPROVED
2012-03-01 MARCH7  membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase  MARCH7  membrane-associated ring finger (C3HC4) 7  Symbol and/or name change 5135510 APPROVED