REXO4 (REX4 homolog, 3'-5' exonuclease) - Rat Genome Database

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Gene: REXO4 (REX4 homolog, 3'-5' exonuclease) Homo sapiens
Analyze
Symbol: REXO4
Name: REX4 homolog, 3'-5' exonuclease
RGD ID: 1314713
HGNC Page HGNC:12820
Description: Enables DNA binding activity and nuclease activity. Involved in DNA catabolic process and DNA repair. Located in nuclear speck and nucleolus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: exonuclease XPMC2; hPMC2; prevents mitotic catastrophe 2 protein homolog; REX4; REX4, RNA exonuclease 4 homolog; RNA exonuclease 4; Xenopus prevents mitotic catastrophe 2 homolog; Xenopus prevents mitotic catatrophe 2 homolog; XPMC2; XPMC2 prevents mitotic catastrophe 2 homolog; XPMC2H
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: AC104759.1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389133,406,058 - 133,418,172 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9133,406,059 - 133,418,096 (-)EnsemblGRCh38hg38GRCh38
GRCh379136,271,182 - 136,283,292 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369135,261,007 - 135,272,985 (-)NCBINCBI36Build 36hg18NCBI36
Build 349133,300,741 - 133,312,718NCBI
Celera9106,821,755 - 106,833,737 (-)NCBICelera
Cytogenetic Map9q34.2NCBI
HuRef9105,773,009 - 105,785,123 (-)NCBIHuRef
CHM1_19136,421,689 - 136,433,799 (-)NCBICHM1_1
T2T-CHM13v2.09145,620,490 - 145,632,600 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nuclear speck  (IDA)
nucleolus  (IDA,IEA)
nucleoplasm  (IDA)
nucleus  (IBA,IEA,NAS)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:9325058   PMID:10908561   PMID:11076863   PMID:11230166   PMID:11256614   PMID:12429849   PMID:12477932   PMID:14702039   PMID:15164053   PMID:15489334   PMID:15489336  
PMID:16196087   PMID:16381901   PMID:20098615   PMID:21081503   PMID:21139048   PMID:21602889   PMID:21873635   PMID:22586326   PMID:22658674   PMID:22681889   PMID:24816145   PMID:24981860  
PMID:25665578   PMID:25693804   PMID:26186194   PMID:26344197   PMID:26496610   PMID:27926873   PMID:28514442   PMID:28977666   PMID:28986522   PMID:29298432   PMID:29467282   PMID:29509190  
PMID:29568061   PMID:29676528   PMID:30209976   PMID:30404004   PMID:30585729   PMID:30948266   PMID:31527615   PMID:31741433   PMID:32296183   PMID:32707033   PMID:32807901   PMID:32814053  
PMID:32838362   PMID:32994395   PMID:33961781   PMID:34079125   PMID:34133714   PMID:35013218   PMID:35140242   PMID:35271311   PMID:35384245   PMID:35833506   PMID:35844135   PMID:35850772  
PMID:35944360   PMID:36089195   PMID:36215168   PMID:36232890   PMID:36244648   PMID:36373674   PMID:36424410   PMID:36526897   PMID:36537216   PMID:36880596   PMID:36912080   PMID:37689310  


Genomics

Comparative Map Data
REXO4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389133,406,058 - 133,418,172 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9133,406,059 - 133,418,096 (-)EnsemblGRCh38hg38GRCh38
GRCh379136,271,182 - 136,283,292 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369135,261,007 - 135,272,985 (-)NCBINCBI36Build 36hg18NCBI36
Build 349133,300,741 - 133,312,718NCBI
Celera9106,821,755 - 106,833,737 (-)NCBICelera
Cytogenetic Map9q34.2NCBI
HuRef9105,773,009 - 105,785,123 (-)NCBIHuRef
CHM1_19136,421,689 - 136,433,799 (-)NCBICHM1_1
T2T-CHM13v2.09145,620,490 - 145,632,600 (-)NCBIT2T-CHM13v2.0
Rexo4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39226,843,575 - 26,854,398 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl226,843,575 - 26,854,398 (-)EnsemblGRCm39 Ensembl
GRCm38226,953,559 - 26,964,386 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl226,953,563 - 26,964,386 (-)EnsemblGRCm38mm10GRCm38
MGSCv37226,809,083 - 26,819,906 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36226,775,572 - 26,786,395 (-)NCBIMGSCv36mm8
Celera226,663,308 - 26,673,885 (-)NCBICelera
Cytogenetic Map2A3NCBI
cM Map219.13NCBI
Rexo4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8330,678,729 - 30,692,376 (-)NCBIGRCr8
mRatBN7.2310,280,654 - 10,291,003 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl310,280,654 - 10,290,996 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx313,340,652 - 13,350,990 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0321,926,053 - 21,936,391 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0320,181,354 - 20,191,692 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.035,500,578 - 5,510,908 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl35,500,589 - 5,510,908 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0310,862,783 - 10,873,113 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.435,849,494 - 5,859,824 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.135,849,797 - 5,865,854 (-)NCBI
Celera35,078,684 - 5,089,014 (-)NCBICelera
Cytogenetic Map3p13-p12NCBI
Rexo4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555132,745,842 - 2,752,792 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555132,745,220 - 2,754,927 (-)NCBIChiLan1.0ChiLan1.0
REXO4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2115,935,794 - 5,947,747 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan195,938,115 - 5,950,083 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09104,528,838 - 104,540,813 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19133,140,392 - 133,152,413 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9133,140,392 - 133,152,413 (-)Ensemblpanpan1.1panPan2
REXO4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1949,827,584 - 49,834,872 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl949,828,067 - 49,836,632 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha949,108,818 - 49,117,512 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0950,701,335 - 50,710,055 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl950,701,353 - 50,710,040 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1949,463,729 - 49,472,367 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0949,805,229 - 49,813,879 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0949,883,307 - 49,891,968 (-)NCBIUU_Cfam_GSD_1.0
Rexo4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947199,870,382 - 199,894,211 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366693,481,294 - 3,491,572 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366693,479,778 - 3,504,938 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
REXO4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1273,011,734 - 273,021,938 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11273,011,736 - 273,021,956 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21306,985,545 - 306,995,759 (-)NCBISscrofa10.2Sscrofa10.2susScr3
REXO4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1124,718,728 - 4,732,138 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl124,718,799 - 4,731,241 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666058253,488 - 270,560 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rexo4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247601,851,877 - 1,859,387 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247601,851,008 - 1,861,370 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in REXO4
20 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh37/hg19 9q21.11-34.3(chr9:71069743-140999928) copy number gain Global developmental delay [RCV000626548] Chr9:71069743..140999928 [GRCh37]
Chr9:9q21.11-34.3
likely pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain See cases [RCV000050348] Chr9:193412..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9q33.2-34.3(chr9:121112395-138075224)x3 copy number gain See cases [RCV000051009] Chr9:121112395..138075224 [GRCh38]
Chr9:123874673..140969676 [GRCh37]
Chr9:122914494..140089497 [NCBI36]
Chr9:9q33.2-34.3
pathogenic
GRCh38/hg38 9q33.2-34.3(chr9:122792658-138124532)x3 copy number gain See cases [RCV000051040] Chr9:122792658..138124532 [GRCh38]
Chr9:125554937..141018984 [GRCh37]
Chr9:124594758..140138805 [NCBI36]
Chr9:9q33.2-34.3
pathogenic
GRCh38/hg38 9q34.11-34.3(chr9:129068560-136495351)x3 copy number gain See cases [RCV000053779] Chr9:129068560..136495351 [GRCh38]
Chr9:131830839..139389803 [GRCh37]
Chr9:130870660..138509624 [NCBI36]
Chr9:9q34.11-34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138114463)x3 copy number gain See cases [RCV000053746] Chr9:193412..138114463 [GRCh38]
Chr9:214367..141008915 [GRCh37]
Chr9:204367..140128736 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9q34.13-34.2(chr9:131406683-133852779)x4 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053812]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053812]|See cases [RCV000053812] Chr9:131406683..133852779 [GRCh38]
Chr9:134282070..136717901 [GRCh37]
Chr9:133271891..135707722 [NCBI36]
Chr9:9q34.13-34.2
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|See cases [RCV000053748] Chr9:193412..138179445 [GRCh38]
Chr9:266045..141073897 [GRCh37]
Chr9:256045..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124532)x3 copy number gain See cases [RCV000053745] Chr9:193412..138124532 [GRCh38]
Chr9:204193..141018984 [GRCh37]
Chr9:194193..140138805 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9q33.2-34.3(chr9:121586837-138179445)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053776]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053776]|See cases [RCV000053776] Chr9:121586837..138179445 [GRCh38]
Chr9:124349116..141073897 [GRCh37]
Chr9:123388937..140193718 [NCBI36]
Chr9:9q33.2-34.3
pathogenic
NM_153710.4(STKLD1):c.2037G>A (p.Leu679=) single nucleotide variant Malignant melanoma [RCV000068569] Chr9:133405415 [GRCh38]
Chr9:136270539 [GRCh37]
Chr9:135260360 [NCBI36]
Chr9:9q34.2
not provided
GRCh38/hg38 9p24.3-q34.3(chr9:204193-138179445) copy number gain See cases [RCV000133791] Chr9:204193..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9q34.11-34.3(chr9:130513207-138124532)x3 copy number gain See cases [RCV000133778] Chr9:130513207..138124532 [GRCh38]
Chr9:133388594..141018984 [GRCh37]
Chr9:132378415..140138805 [NCBI36]
Chr9:9q34.11-34.3
pathogenic
GRCh38/hg38 9q34.11-34.3(chr9:129068560-138179445)x3 copy number gain See cases [RCV000134916] Chr9:129068560..138179445 [GRCh38]
Chr9:131830839..141073897 [GRCh37]
Chr9:130870660..140193718 [NCBI36]
Chr9:9q34.11-34.3
pathogenic
GRCh38/hg38 9q33.2-34.3(chr9:121073102-138179445)x3 copy number gain See cases [RCV000134920] Chr9:121073102..138179445 [GRCh38]
Chr9:123835380..141073897 [GRCh37]
Chr9:122875201..140193718 [NCBI36]
Chr9:9q33.2-34.3
pathogenic
GRCh38/hg38 9q34.13-34.3(chr9:132986903-138114463)x3 copy number gain See cases [RCV000136790] Chr9:132986903..138114463 [GRCh38]
Chr9:135862290..141008915 [GRCh37]
Chr9:134852111..140128736 [NCBI36]
Chr9:9q34.13-34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124524)x3 copy number gain See cases [RCV000138783] Chr9:193412..138124524 [GRCh38]
Chr9:204090..141018976 [GRCh37]
Chr9:194090..140138797 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p11.2-q34.3(chr9:193412-138159073)x3 copy number gain See cases [RCV000139207] Chr9:193412..138159073 [GRCh38]
Chr9:68420641..141053525 [GRCh37]
Chr9:67910461..140173346 [NCBI36]
Chr9:9p11.2-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138159073)x3 copy number gain See cases [RCV000138962] Chr9:193412..138159073 [GRCh38]
Chr9:204104..141053525 [GRCh37]
Chr9:194104..140173346 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic|conflicting data from submitters
GRCh38/hg38 9p24.3-q34.3(chr9:203861-138125937)x3 copy number gain See cases [RCV000141876] Chr9:203861..138125937 [GRCh38]
Chr9:203861..141020389 [GRCh37]
Chr9:193861..140140210 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9q34.13-34.3(chr9:132386553-138059695)x3 copy number gain See cases [RCV000142636] Chr9:132386553..138059695 [GRCh38]
Chr9:135261940..140954147 [GRCh37]
Chr9:134251761..140073968 [NCBI36]
Chr9:9q34.13-34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:203862-138125937)x3 copy number gain See cases [RCV000143476] Chr9:203862..138125937 [GRCh38]
Chr9:203862..141020389 [GRCh37]
Chr9:193862..140140210 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain See cases [RCV000148113] Chr9:193412..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:163131-141122114)x3 copy number gain See cases [RCV000240081] Chr9:163131..141122114 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:62525-141006407) copy number gain See cases [RCV000449375] Chr9:62525..141006407 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020389)x3 copy number gain See cases [RCV000447207] Chr9:203861..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9q33.3-34.3(chr9:128652785-141044751)x3 copy number gain See cases [RCV000447080] Chr9:128652785..141044751 [GRCh37]
Chr9:9q33.3-34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203864-141020389)x3 copy number gain See cases [RCV000448978] Chr9:203864..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9q33.2-34.3(chr9:124642754-141146461)x3 copy number gain See cases [RCV000448784] Chr9:124642754..141146461 [GRCh37]
Chr9:9q33.2-34.3
pathogenic
NM_020385.4(REXO4):c.523G>A (p.Glu175Lys) single nucleotide variant Inborn genetic diseases [RCV003273869] Chr9:133414714 [GRCh38]
Chr9:136279834 [GRCh37]
Chr9:9q34.2
likely benign
NM_020385.4(REXO4):c.137G>T (p.Ser46Ile) single nucleotide variant Inborn genetic diseases [RCV003299584] Chr9:133417708 [GRCh38]
Chr9:136282828 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.890G>A (p.Arg297Gln) single nucleotide variant Inborn genetic diseases [RCV003243876] Chr9:133412319 [GRCh38]
Chr9:136277439 [GRCh37]
Chr9:9q34.2
uncertain significance
GRCh37/hg19 9q34.13-34.3(chr9:135377559-141213431)x1 copy number loss mTOR Inhibitor response [RCV000626442] Chr9:135377559..141213431 [GRCh37]
Chr9:9q34.13-34.3
drug response
GRCh37/hg19 9p24.3-q34.3(chr9:203862-141020389) copy number gain See cases [RCV000512392] Chr9:203862..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9q34.13-34.3(chr9:135105971-141020389)x3 copy number gain not provided [RCV000683160] Chr9:135105971..141020389 [GRCh37]
Chr9:9q34.13-34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141122247)x3 copy number gain not provided [RCV000748055] Chr9:10590..141122247 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141107672)x3 copy number gain not provided [RCV000748053] Chr9:10590..141107672 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:46587-141066491)x3 copy number gain not provided [RCV000748063] Chr9:46587..141066491 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141114095)x2 copy number gain not provided [RCV000748054] Chr9:10590..141114095 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
NC_000009.11:g.(?_135771602)_(136769889_?)dup duplication Tuberous sclerosis 1 [RCV001033460] Chr9:135771602..136769889 [GRCh37]
Chr9:9q34.13-34.2
uncertain significance
NC_000009.11:g.(?_134379574)_(138678377_?)dup duplication Ehlers-Danlos syndrome, classic type [RCV000807925] Chr9:134379574..138678377 [GRCh37]
Chr9:9q34.13-34.3
uncertain significance
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020388)x3 copy number gain not provided [RCV000845900] Chr9:203861..141020388 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
NC_000009.11:g.(?_135771850)_(137038881_?)dup duplication Tuberous sclerosis 1 [RCV001033564] Chr9:135771850..137038881 [GRCh37]
Chr9:9q34.13-34.2
uncertain significance
GRCh37/hg19 9q21.11-34.3(chr9:71416475-141020389)x3 copy number gain not provided [RCV000847808] Chr9:71416475..141020389 [GRCh37]
Chr9:9q21.11-34.3
pathogenic
NM_020385.4(REXO4):c.664C>T (p.Gln222Ter) single nucleotide variant Recurrent spontaneous abortion [RCV001250900] Chr9:133412830 [GRCh38]
Chr9:136277950 [GRCh37]
Chr9:9q34.2
uncertain significance
GRCh37/hg19 9p24.3-q34.3(chr9:353349-141020389) copy number gain not specified [RCV002053823] Chr9:353349..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
NC_000009.11:g.(?_135139626)_(140034216_?)dup duplication Developmental and epileptic encephalopathy, 14 [RCV003111109]|Leigh syndrome [RCV003122287]|Rafiq syndrome [RCV003122286]|Tuberous sclerosis 1 [RCV003111108] Chr9:135139626..140034216 [GRCh37]
Chr9:9q34.13-34.3
uncertain significance
NC_000009.11:g.(?_131087402)_(141016451_?)dup duplication Neonatal encephalomyopathy-cardiomyopathy-respiratory distress syndrome [RCV003119700] Chr9:131087402..141016451 [GRCh37]
Chr9:9q34.11-34.3
uncertain significance
NC_000009.11:g.(?_136218768)_(141016451_?)dup duplication Kleefstra syndrome 1 [RCV003122719] Chr9:136218768..141016451 [GRCh37]
Chr9:9q34.2-34.3
uncertain significance
NM_020385.4(REXO4):c.207C>G (p.Asn69Lys) single nucleotide variant Inborn genetic diseases [RCV002728226] Chr9:133417638 [GRCh38]
Chr9:136282758 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.93C>G (p.Asn31Lys) single nucleotide variant Inborn genetic diseases [RCV002799915] Chr9:133417752 [GRCh38]
Chr9:136282872 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.437G>A (p.Arg146His) single nucleotide variant Inborn genetic diseases [RCV002951483] Chr9:133414800 [GRCh38]
Chr9:136279920 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.359C>T (p.Pro120Leu) single nucleotide variant Inborn genetic diseases [RCV002704076] Chr9:133414878 [GRCh38]
Chr9:136279998 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.889C>T (p.Arg297Trp) single nucleotide variant Inborn genetic diseases [RCV002668184] Chr9:133412320 [GRCh38]
Chr9:136277440 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.213G>T (p.Lys71Asn) single nucleotide variant Inborn genetic diseases [RCV002645310] Chr9:133417632 [GRCh38]
Chr9:136282752 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.1183G>A (p.Val395Ile) single nucleotide variant Inborn genetic diseases [RCV002698092] Chr9:133407039 [GRCh38]
Chr9:136272163 [GRCh37]
Chr9:9q34.2
likely benign
NM_020385.4(REXO4):c.1223G>T (p.Arg408Met) single nucleotide variant Inborn genetic diseases [RCV002765255] Chr9:133406999 [GRCh38]
Chr9:136272123 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.667A>G (p.Ser223Gly) single nucleotide variant Inborn genetic diseases [RCV002984125] Chr9:133412827 [GRCh38]
Chr9:136277947 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.1217G>A (p.Arg406Gln) single nucleotide variant Inborn genetic diseases [RCV002670539] Chr9:133407005 [GRCh38]
Chr9:136272129 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.571G>A (p.Glu191Lys) single nucleotide variant Inborn genetic diseases [RCV003189027] Chr9:133414666 [GRCh38]
Chr9:136279786 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.257A>G (p.Glu86Gly) single nucleotide variant Inborn genetic diseases [RCV003184859] Chr9:133414980 [GRCh38]
Chr9:136280100 [GRCh37]
Chr9:9q34.2
uncertain significance
NM_020385.4(REXO4):c.1156G>A (p.Asp386Asn) single nucleotide variant Inborn genetic diseases [RCV003258338] Chr9:133407066 [GRCh38]
Chr9:136272190 [GRCh37]
Chr9:9q34.2
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1785
Count of miRNA genes:726
Interacting mature miRNAs:838
Transcripts:ENST00000371935, ENST00000371942, ENST00000445916, ENST00000454825, ENST00000478037, ENST00000494045
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH75089  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371531,744,834 - 31,745,073UniSTSGRCh37
GRCh379136,271,206 - 136,271,445UniSTSGRCh37
Build 369135,261,027 - 135,261,266RGDNCBI36
Celera159,470,034 - 9,470,273UniSTS
Celera9106,821,775 - 106,822,014RGD
Cytogenetic Map9q34.2UniSTS
HuRef158,922,537 - 8,922,776UniSTS
HuRef9105,773,033 - 105,773,272UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2362 1772 1590 491 1358 342 4308 1867 3043 371 1447 1536 163 1144 2753 4
Low 77 1219 136 133 593 123 49 330 691 48 13 77 12 1 60 35 2 2
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001279349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001279350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001279351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_020385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_103995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_103996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047423608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054331582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054331583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054331584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054363315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054363316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054363317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001746354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF273304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF295774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK000247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK295982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK314333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK315904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL136894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL158826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL593848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC071691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM984937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX333016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC387839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT584610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000371935   ⟹   ENSP00000361003
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9133,406,059 - 133,418,096 (-)Ensembl
RefSeq Acc Id: ENST00000371942   ⟹   ENSP00000361010
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9133,406,062 - 133,418,010 (-)Ensembl
RefSeq Acc Id: ENST00000445916   ⟹   ENSP00000391534
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9133,412,363 - 133,415,900 (-)Ensembl
RefSeq Acc Id: ENST00000454825   ⟹   ENSP00000394229
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9133,407,006 - 133,417,977 (-)Ensembl
RefSeq Acc Id: ENST00000478037
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9133,412,299 - 133,417,959 (-)Ensembl
RefSeq Acc Id: ENST00000494045
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl9133,411,004 - 133,417,954 (-)Ensembl
RefSeq Acc Id: NM_001279349   ⟹   NP_001266278
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389133,406,062 - 133,418,010 (-)NCBI
GRCh379136,271,182 - 136,283,292 (-)NCBI
HuRef9105,773,009 - 105,785,123 (-)NCBI
CHM1_19136,421,689 - 136,433,723 (-)NCBI
T2T-CHM13v2.09145,620,494 - 145,632,438 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001279350   ⟹   NP_001266279
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389133,406,062 - 133,418,010 (-)NCBI
GRCh379136,271,182 - 136,283,292 (-)NCBI
HuRef9105,773,009 - 105,785,123 (-)NCBI
CHM1_19136,421,689 - 136,433,723 (-)NCBI
T2T-CHM13v2.09145,620,494 - 145,632,438 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001279351   ⟹   NP_001266280
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389133,406,058 - 133,418,172 (-)NCBI
GRCh379136,271,182 - 136,283,292 (-)NCBI
HuRef9105,773,009 - 105,785,123 (-)NCBI
CHM1_19136,421,689 - 136,433,799 (-)NCBI
T2T-CHM13v2.09145,620,490 - 145,632,600 (-)NCBI
Sequence:
RefSeq Acc Id: NM_020385   ⟹   NP_065118
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389133,406,062 - 133,418,010 (-)NCBI
GRCh379136,271,182 - 136,283,292 (-)NCBI
Build 369135,261,007 - 135,272,985 (-)NCBI Archive
Celera9106,821,755 - 106,833,737 (-)RGD
HuRef9105,773,009 - 105,785,123 (-)NCBI
CHM1_19136,421,689 - 136,433,723 (-)NCBI
T2T-CHM13v2.09145,620,494 - 145,632,438 (-)NCBI
Sequence:
RefSeq Acc Id: NR_103995
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389133,406,062 - 133,418,010 (-)NCBI
GRCh379136,271,182 - 136,283,292 (-)NCBI
HuRef9105,773,009 - 105,785,123 (-)NCBI
CHM1_19136,421,689 - 136,433,723 (-)NCBI
T2T-CHM13v2.09145,620,494 - 145,632,438 (-)NCBI
Sequence:
RefSeq Acc Id: NR_103996
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389133,406,062 - 133,418,010 (-)NCBI
GRCh379136,271,182 - 136,283,292 (-)NCBI
HuRef9105,773,009 - 105,785,123 (-)NCBI
CHM1_19136,421,689 - 136,433,723 (-)NCBI
T2T-CHM13v2.09145,620,494 - 145,632,438 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024447611   ⟹   XP_024303379
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389133,406,058 - 133,418,010 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024447612   ⟹   XP_024303380
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389133,406,058 - 133,418,010 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047423608   ⟹   XP_047279564
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389133,410,985 - 133,418,010 (-)NCBI
RefSeq Acc Id: XM_054363315   ⟹   XP_054219290
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09145,620,490 - 145,632,438 (-)NCBI
RefSeq Acc Id: XM_054363316   ⟹   XP_054219291
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09145,620,490 - 145,632,438 (-)NCBI
RefSeq Acc Id: XM_054363317   ⟹   XP_054219292
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.09145,625,413 - 145,632,438 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001266278 (Get FASTA)   NCBI Sequence Viewer  
  NP_001266279 (Get FASTA)   NCBI Sequence Viewer  
  NP_001266280 (Get FASTA)   NCBI Sequence Viewer  
  NP_065118 (Get FASTA)   NCBI Sequence Viewer  
  XP_024303379 (Get FASTA)   NCBI Sequence Viewer  
  XP_024303380 (Get FASTA)   NCBI Sequence Viewer  
  XP_047279564 (Get FASTA)   NCBI Sequence Viewer  
  XP_054187557 (Get FASTA)   NCBI Sequence Viewer  
  XP_054187558 (Get FASTA)   NCBI Sequence Viewer  
  XP_054187559 (Get FASTA)   NCBI Sequence Viewer  
  XP_054219290 (Get FASTA)   NCBI Sequence Viewer  
  XP_054219291 (Get FASTA)   NCBI Sequence Viewer  
  XP_054219292 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF98162 (Get FASTA)   NCBI Sequence Viewer  
  AAG02123 (Get FASTA)   NCBI Sequence Viewer  
  AAH09274 (Get FASTA)   NCBI Sequence Viewer  
  BAB15152 (Get FASTA)   NCBI Sequence Viewer  
  BAG36979 (Get FASTA)   NCBI Sequence Viewer  
  BAG58757 (Get FASTA)   NCBI Sequence Viewer  
  BAG65343 (Get FASTA)   NCBI Sequence Viewer  
  BAH14275 (Get FASTA)   NCBI Sequence Viewer  
  CAB66828 (Get FASTA)   NCBI Sequence Viewer  
  CAI12845 (Get FASTA)   NCBI Sequence Viewer  
  CAI12847 (Get FASTA)   NCBI Sequence Viewer  
  CAI12848 (Get FASTA)   NCBI Sequence Viewer  
  CAI12849 (Get FASTA)   NCBI Sequence Viewer  
  EAW88082 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000361003
  ENSP00000361003.2
  ENSP00000361010
  ENSP00000361010.3
  ENSP00000391534.1
  ENSP00000394229.1
  ENSP00000486065.1
  ENSP00000487504.1
GenBank Protein Q9GZR2 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_065118   ⟸   NM_020385
- Peptide Label: isoform 1
- UniProtKB: Q5T8S6 (UniProtKB/Swiss-Prot),   Q5T8S5 (UniProtKB/Swiss-Prot),   Q5T8S4 (UniProtKB/Swiss-Prot),   B2RAT2 (UniProtKB/Swiss-Prot),   Q9GZW3 (UniProtKB/Swiss-Prot),   Q9GZR2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001266280   ⟸   NM_001279351
- Peptide Label: isoform 4
- UniProtKB: B4DJ95 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001266278   ⟸   NM_001279349
- Peptide Label: isoform 2
- UniProtKB: A0A0C4DG31 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001266279   ⟸   NM_001279350
- Peptide Label: isoform 3
- UniProtKB: B4E331 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024303380   ⟸   XM_024447612
- Peptide Label: isoform X1
- UniProtKB: B4E331 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024303379   ⟸   XM_024447611
- Peptide Label: isoform X1
- UniProtKB: B4E331 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000361003   ⟸   ENST00000371935
RefSeq Acc Id: ENSP00000361010   ⟸   ENST00000371942
RefSeq Acc Id: ENSP00000394229   ⟸   ENST00000454825
RefSeq Acc Id: ENSP00000391534   ⟸   ENST00000445916
RefSeq Acc Id: XP_047279564   ⟸   XM_047423608
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054219291   ⟸   XM_054363316
- Peptide Label: isoform X1
- UniProtKB: B4E331 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054219290   ⟸   XM_054363315
- Peptide Label: isoform X1
- UniProtKB: B4E331 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054219292   ⟸   XM_054363317
- Peptide Label: isoform X2
Protein Domains
Exonuclease

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9GZR2-F1-model_v2 AlphaFold Q9GZR2 1-422 view protein structure

Promoters
RGD ID:7216549
Promoter ID:EPDNEW_H14020
Type:initiation region
Name:REXO4_1
Description:REX4 homolog, 3'-5' exonuclease
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh389133,417,983 - 133,418,043EPDNEW
RGD ID:6808038
Promoter ID:HG_KWN:65453
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000054904
Position:
Human AssemblyChrPosition (strand)Source
Build 369135,271,519 - 135,272,019 (-)MPROMDB
RGD ID:6808452
Promoter ID:HG_KWN:65454
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_020385,   OTTHUMT00000054900,   OTTHUMT00000054902,   OTTHUMT00000054903,   UC004CDN.1,   UC004CDO.1,   UC010NAM.1
Position:
Human AssemblyChrPosition (strand)Source
Build 369135,272,881 - 135,273,381 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:12820 AgrOrtholog
COSMIC REXO4 COSMIC
Ensembl Genes ENSG00000148300 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSG00000280706 UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000371935 ENTREZGENE
  ENST00000371935.6 UniProtKB/Swiss-Prot
  ENST00000371942 ENTREZGENE
  ENST00000371942.8 UniProtKB/Swiss-Prot
  ENST00000445916.1 UniProtKB/TrEMBL
  ENST00000454825.1 UniProtKB/TrEMBL
  ENST00000628678.2 UniProtKB/Swiss-Prot
  ENST00000630460.3 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.420.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000148300 GTEx
  ENSG00000280706 GTEx
HGNC ID HGNC:12820 ENTREZGENE
Human Proteome Map REXO4 Human Proteome Map
InterPro Exonuclease_RNaseT/DNA_pol3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  REX4_DEDDh_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  REXO1/3/4-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNaseH-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNaseH_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:57109 UniProtKB/Swiss-Prot
NCBI Gene 57109 ENTREZGENE
OMIM 602930 OMIM
PANTHER PTHR12801:SF130 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RNA EXONUCLEASE 4 UniProtKB/TrEMBL
  RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam RNase_T UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA37414 PharmGKB
SMART EXOIII UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53098 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0C4DG22_HUMAN UniProtKB/TrEMBL
  A0A0C4DG31 ENTREZGENE, UniProtKB/TrEMBL
  B2RAT2 ENTREZGENE
  B4DJ95 ENTREZGENE, UniProtKB/TrEMBL
  B4E331 ENTREZGENE, UniProtKB/TrEMBL
  Q5T8S4 ENTREZGENE
  Q5T8S5 ENTREZGENE
  Q5T8S6 ENTREZGENE
  Q9GZR2 ENTREZGENE
  Q9GZW3 ENTREZGENE
  REXO4_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary B2RAT2 UniProtKB/Swiss-Prot
  Q5T8S4 UniProtKB/Swiss-Prot
  Q5T8S5 UniProtKB/Swiss-Prot
  Q5T8S6 UniProtKB/Swiss-Prot
  Q9GZW3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-07-14 REXO4  REX4 homolog, 3'-5' exonuclease    REX4, RNA exonuclease 4 homolog (S. cerevisiae)  Symbol and/or name change 5135510 APPROVED