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ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine dimer repair
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Accession:GO:0006290 term browser browse the term
Definition:The repair of UV-induced T-T, C-T and C-C dimers.


show annotations for term's descendants           Sort by:
pyrimidine dimer repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDB2 damage specific DNA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15558025) Ensembl
MGI		 PMID:15558025 GO_REF:0000107 NCBI chr11:47,214,454...47,239,217
Ensembl chr11:47,214,465...47,239,217 		JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9150142) Ensembl
MGI		 PMID:9150142 GO_REF:0000107 NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538 		JBrowse link
G POLB DNA polymerase beta involved_in ISO
IEA		 RGD
Ensembl		 PMID:12388548 GO_REF:0000107 RGD:633643 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLH DNA polymerase eta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10871396) Ensembl
MGI		 PMID:10871396 GO_REF:0000107 NCBI chr 6:43,576,185...43,620,523
Ensembl chr 6:43,576,185...43,620,523 		JBrowse link
photoreactive repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRY2 cryptochrome circadian regulator 2 NOT|involved_in IDA (PMID:12627958) UniProt PMID:12627958 NCBI chr11:45,847,118...45,883,244
Ensembl chr11:45,847,118...45,883,248 		JBrowse link
pyrimidine dimer repair by nucleotide-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10454634) Ensembl
MGI		 PMID:10454634 GO_REF:0000107 NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828 		JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12660172) Ensembl
MGI		 PMID:12660172 GO_REF:0000107 NCBI chr21:39,342,315...39,349,088
Ensembl chr21:39,342,315...39,349,647 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA
IMP		 (PMID:21149730) Ensembl
UniProt		 PMID:21149730 GO_REF:0000107 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17049932) Ensembl
MGI		 PMID:17049932 GO_REF:0000107 NCBI chr 3:14,145,147...14,178,601
Ensembl chr 3:14,145,147...14,178,621 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19770
    cellular process 18460
      cellular response to stimulus 8436
        cellular response to stress 2158
          DNA damage response 968
            DNA repair 652
              pyrimidine dimer repair 9
                photoreactive repair 1
                pyrimidine dimer repair by nucleotide-excision repair 4
Path 2
Term Annotations click to browse term
  biological_process 19770
    metabolic process 12509
      cellular metabolic process 11168
        cellular aromatic compound metabolic process 6823
          nucleobase-containing compound metabolic process 6564
            nucleic acid metabolic process 5957
              DNA metabolic process 1100
                DNA repair 652
                  pyrimidine dimer repair 9
                    photoreactive repair 1
                    pyrimidine dimer repair by nucleotide-excision repair 4
paths to the root