Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | nonphotosensitive trichothiodystrophy 5 | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | nonphotosensitive trichothiodystrophy 5 | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | | |
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# | Reference Title | Reference Citation |
1. | GOAs Human GO annotations | GOA_HUMAN data from the GO Consortium |
2. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
3. | RGD HPO Phenotype Annotation Pipeline | RGD automated import pipeline for human HPO-to-gene-to-disease annotations |
PMID:9224902 | PMID:12477932 | PMID:15345747 | PMID:15489334 | PMID:15772651 | PMID:17081983 | PMID:19690564 | PMID:21044950 | PMID:21873635 | PMID:22365833 | PMID:22412018 | PMID:22493164 |
PMID:24999758 | PMID:25612912 | PMID:26186194 | PMID:26496610 | PMID:26735018 | PMID:26972000 | PMID:27609421 | PMID:28378594 | PMID:28514442 | PMID:28978524 | PMID:29360106 | PMID:29393393 |
PMID:29568061 | PMID:30021884 | PMID:30404004 | PMID:30890647 | PMID:31091453 | PMID:31793730 | PMID:31880405 | PMID:31985874 | PMID:32152280 | PMID:32344865 | PMID:32460013 | PMID:33916271 |
PMID:33961781 | PMID:34079125 | PMID:34373451 | PMID:34597346 | PMID:34686315 | PMID:35256949 | PMID:35439318 | PMID:35563538 | PMID:35819319 | PMID:35831314 | PMID:35944360 | PMID:36736316 |
PMID:37164050 | PMID:37827155 |
RNF113A (Homo sapiens - human) |
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Rnf113a1 (Mus musculus - house mouse) |
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Rnf113a1 (Rattus norvegicus - Norway rat) |
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Rnf113a (Chinchilla lanigera - long-tailed chinchilla) |
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RNF113A (Pan paniscus - bonobo/pygmy chimpanzee) |
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RNF113A (Canis lupus familiaris - dog) |
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Rnf113a (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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RNF113A (Sus scrofa - pig) |
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RNF113A (Chlorocebus sabaeus - green monkey) |
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Rnf113a (Heterocephalus glaber - naked mole-rat) |
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Variants in RNF113A
82 total Variants |
Name | Type | Condition(s) | Position(s) | Clinical significance |
GRCh38/hg38 Xp22.33-q28(chrX:3092486-155699618)x2 | copy number gain | See cases [RCV000050889] | ChrX:3092486..155699618 [GRCh38] ChrX:3010527..154929279 [GRCh37] ChrX:3020527..154582473 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:20140-155699618)x3 | copy number gain | See cases [RCV000050810] | ChrX:20140..155699618 [GRCh38] ChrX:70140..154929279 [GRCh37] ChrX:10140..154582473 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:20140-155699618)x1 | copy number loss | See cases [RCV000050811] | ChrX:20140..155699618 [GRCh38] ChrX:70140..154929279 [GRCh37] ChrX:10140..154582473 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x1 | copy number loss | See cases [RCV000050699] | ChrX:10679..156022206 [GRCh38] ChrX:60679..155251871 [GRCh37] ChrX:679..154905065 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x1 | copy number loss | Global developmental delay [RCV000050386]|See cases [RCV000050386] | ChrX:10679..156013167 [GRCh38] ChrX:60679..155242832 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xq23-28(chrX:115417992-156022206)x1 | copy number loss | See cases [RCV000051160] | ChrX:115417992..156022206 [GRCh38] ChrX:114652461..155251871 [GRCh37] ChrX:114558717..154905065 [NCBI36] ChrX:Xq23-28 |
pathogenic |
NM_006978.3(RNF113A):c.901C>T (p.Gln301Ter) | single nucleotide variant | Trichothiodystrophy 5, nonphotosensitive [RCV000173011] | ChrX:119870713 [GRCh38] ChrX:119004676 [GRCh37] ChrX:Xq24 |
pathogenic |
GRCh38/hg38 Xp11.21-q28(chrX:57372584-155996431)x1 | copy number loss | See cases [RCV000051665] | ChrX:57372584..155996431 [GRCh38] ChrX:57399017..155226096 [GRCh37] ChrX:57415742..154879290 [NCBI36] ChrX:Xp11.21-q28 |
pathogenic |
GRCh38/hg38 Xq11.1-28(chrX:63279794-155939524)x1 | copy number loss | See cases [RCV000051666] | ChrX:63279794..155939524 [GRCh38] ChrX:62499671..155169188 [GRCh37] ChrX:62416396..154822382 [NCBI36] ChrX:Xq11.1-28 |
pathogenic |
GRCh38/hg38 Xq23-28(chrX:116264813-155980575)x1 | copy number loss | See cases [RCV000051728] | ChrX:116264813..155980575 [GRCh38] ChrX:115396069..155210240 [GRCh37] ChrX:115310097..154863434 [NCBI36] ChrX:Xq23-28 |
pathogenic |
GRCh38/hg38 Xq22.1-28(chrX:100524562-155669954)x1 | copy number loss | See cases [RCV000051713] | ChrX:100524562..155669954 [GRCh38] ChrX:99779559..154785891 [GRCh37] ChrX:99666215..154552809 [NCBI36] ChrX:Xq22.1-28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:26101-155999293)x3 | copy number gain | See cases [RCV000052322] | ChrX:26101..155999293 [GRCh38] ChrX:76101..155228958 [GRCh37] ChrX:16101..154882152 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:2790845-155699618)x3 | copy number gain | See cases [RCV000052359] | ChrX:2790845..155699618 [GRCh38] ChrX:2708886..154929279 [GRCh37] ChrX:2718886..154582473 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:237659-156022362)x3 | copy number gain | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052327]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052327]|See cases [RCV000052327] | ChrX:237659..156022362 [GRCh38] ChrX:154326..155252027 [GRCh37] ChrX:94326..154905221 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xq13.2-27.1(chrX:73008114-140201321)x4 | copy number gain | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052418]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052418]|See cases [RCV000052418] | ChrX:73008114..140201321 [GRCh38] ChrX:72227953..139283477 [GRCh37] ChrX:72144678..139111143 [NCBI36] ChrX:Xq13.2-27.1 |
pathogenic |
GRCh38/hg38 Xq21.1-25(chrX:81261589-126519353)x3 | copy number gain | See cases [RCV000052438] | ChrX:81261589..126519353 [GRCh38] ChrX:80517088..125653336 [GRCh37] ChrX:80403744..125481017 [NCBI36] ChrX:Xq21.1-25 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x1 | copy number loss | Global developmental delay [RCV000052986]|Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052987]|Intellectual functioning disability [RCV000052988]|Global developmental delay [RCV000052989]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052987]|See cases [RCV000052986] | ChrX:26102..155996431 [GRCh38] ChrX:76102..155226096 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:14245-155999293)x1 | copy number loss | Hypoplastic left heart [RCV000052982]|See cases [RCV000052982] | ChrX:14245..155999293 [GRCh38] ChrX:64245..155228958 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x3 | copy number gain | Global developmental delay [RCV000052984]|Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052985]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052985]|See cases [RCV000052984] | ChrX:26102..155996431 [GRCh38] ChrX:76102..155226096 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_006978.3(RNF113A):c.247T>A (p.Leu83Met) | single nucleotide variant | not provided [RCV000122529] | ChrX:119871367 [GRCh38] ChrX:119005330 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh38/hg38 Xp22.33-q28(chrX:10701-155978689)x1 | copy number loss | See cases [RCV000133792] | ChrX:10701..155978689 [GRCh38] ChrX:60701..155208354 [GRCh37] ChrX:701..154861548 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x3 | copy number gain | See cases [RCV000052984] | ChrX:26102..155996431 [GRCh38] ChrX:76102..155226096 [GRCh37] ChrX:16102..154879290 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:26102-155996431)x1 | copy number loss | See cases [RCV000052986] | ChrX:26102..155996431 [GRCh38] ChrX:76102..155226096 [GRCh37] ChrX:16102..154879290 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xq21.1-28(chrX:85123740-156022206)x3 | copy number gain | See cases [RCV000133744] | ChrX:85123740..156022206 [GRCh38] ChrX:84378746..155251871 [GRCh37] ChrX:84265402..154905065 [NCBI36] ChrX:Xq21.1-28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x3 | copy number gain | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000050385]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000050385]|See cases [RCV000050385] | ChrX:10679..156013167 [GRCh38] ChrX:60679..155242832 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x3 | copy number gain | See cases [RCV000050697] | ChrX:10679..156022206 [GRCh38] ChrX:60679..155251871 [GRCh37] ChrX:679..154905065 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters |
GRCh38/hg38 Xp22.33-q28(chrX:27245-155996431)x3 | copy number gain | See cases [RCV000052324] | ChrX:27245..155996431 [GRCh38] ChrX:77245..155226096 [GRCh37] ChrX:17245..154879290 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:40704-156022362)x3 | copy number gain | See cases [RCV000052325] | ChrX:40704..156022362 [GRCh38] ChrX:90704..155252027 [GRCh37] ChrX:30704..154905221 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022826)x4 | copy number gain | See cases [RCV000133654] | ChrX:10679..156022826 [GRCh38] ChrX:60679..155252491 [GRCh37] ChrX:679..154905685 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x1 | copy number loss | See cases [RCV000050386] | ChrX:10679..156013167 [GRCh38] ChrX:60679..155242832 [GRCh37] ChrX:679..154896026 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156013167)x3 | copy number gain | See cases [RCV000050385] | ChrX:10679..156013167 [GRCh38] ChrX:60679..155242832 [GRCh37] ChrX:679..154896026 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:14245-155999293)x1 | copy number loss | See cases [RCV000052982] | ChrX:14245..155999293 [GRCh38] ChrX:64245..155228958 [GRCh37] ChrX:4245..154882152 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xq21.1-28(chrX:78605009-156016560)x1 | copy number loss | See cases [RCV000134570] | ChrX:78605009..156016560 [GRCh38] ChrX:77860506..155246225 [GRCh37] ChrX:77747162..154899419 [NCBI36] ChrX:Xq21.1-28 |
pathogenic |
GRCh38/hg38 Xq11.1-28(chrX:62712230-155978888)x3 | copy number gain | See cases [RCV000134025] | ChrX:62712230..155978888 [GRCh38] ChrX:61931700..155208553 [GRCh37] ChrX:61848425..154861747 [NCBI36] ChrX:Xq11.1-28 |
pathogenic |
GRCh38/hg38 Xp21.1-q28(chrX:37076284-156016920)x1 | copy number loss | See cases [RCV000135300] | ChrX:37076284..156016920 [GRCh38] ChrX:37094357..155246585 [GRCh37] ChrX:37004278..154899779 [NCBI36] ChrX:Xp21.1-q28 |
pathogenic |
GRCh38/hg38 Xq21.31-28(chrX:92222680-156016920)x1 | copy number loss | See cases [RCV000135307] | ChrX:92222680..156016920 [GRCh38] ChrX:91477679..155246585 [GRCh37] ChrX:91364335..154899779 [NCBI36] ChrX:Xq21.31-28 |
pathogenic |
GRCh38/hg38 Xq13.2-28(chrX:74510116-156022206)x1 | copy number loss | See cases [RCV000134958] | ChrX:74510116..156022206 [GRCh38] ChrX:73729951..155251871 [GRCh37] ChrX:73646676..154905065 [NCBI36] ChrX:Xq13.2-28 |
pathogenic |
GRCh38/hg38 Xq23-28(chrX:114533139-156022206)x1 | copy number loss | See cases [RCV000134947] | ChrX:114533139..156022206 [GRCh38] ChrX:113767592..155251871 [GRCh37] ChrX:113673848..154905065 [NCBI36] ChrX:Xq23-28 |
pathogenic |
GRCh38/hg38 Xq21.1-28(chrX:77369933-156013167)x1 | copy number loss | See cases [RCV000135454] | ChrX:77369933..156013167 [GRCh38] ChrX:76634813..155242832 [GRCh37] ChrX:76507069..154896026 [NCBI36] ChrX:Xq21.1-28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10701-156003229)x1 | copy number loss | See cases [RCV000136097] | ChrX:10701..156003229 [GRCh38] ChrX:60701..155232894 [GRCh37] ChrX:701..154886088 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:40904-155998166)x1 | copy number loss | See cases [RCV000136478] | ChrX:40904..155998166 [GRCh38] ChrX:90904..155227831 [GRCh37] ChrX:30904..154881025 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xq21.33-28(chrX:94462929-156001635)x3 | copy number gain | See cases [RCV000136552] | ChrX:94462929..156001635 [GRCh38] ChrX:93717928..155231300 [GRCh37] ChrX:93604584..154884494 [NCBI36] ChrX:Xq21.33-28 |
pathogenic |
GRCh38/hg38 Xq23-28(chrX:111745722-154555423)x3 | copy number gain | See cases [RCV000136030] | ChrX:111745722..154555423 [GRCh38] ChrX:110988950..153783638 [GRCh37] ChrX:110875606..153436832 [NCBI36] ChrX:Xq23-28 |
pathogenic |
GRCh38/hg38 Xp22.33-q25(chrX:10701-128393708) | copy number loss | See cases [RCV000136094] | ChrX:10701..128393708 [GRCh38] ChrX:60701..127527686 [GRCh37] ChrX:701..127355367 [NCBI36] ChrX:Xp22.33-q25 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10001-156030895)x1 | copy number loss | See cases [RCV000136005] | ChrX:10001..156030895 [GRCh38] ChrX:60001..155260560 [GRCh37] ChrX:1..154913754 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xq21.1-28(chrX:79093152-156003229)x1 | copy number loss | See cases [RCV000136083] | ChrX:79093152..156003229 [GRCh38] ChrX:78348649..155232894 [GRCh37] ChrX:78235305..154886088 [NCBI36] ChrX:Xq21.1-28 |
pathogenic |
GRCh38/hg38 Xq13.3-28(chrX:75086417-156022206)x1 | copy number loss | See cases [RCV000137113] | ChrX:75086417..156022206 [GRCh38] ChrX:74306252..155251871 [GRCh37] ChrX:74222977..154905065 [NCBI36] ChrX:Xq13.3-28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:2765636-155522304)x3 | copy number gain | See cases [RCV000136791] | ChrX:2765636..155522304 [GRCh38] ChrX:2683677..154751965 [GRCh37] ChrX:2693677..154405159 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xq22.1-28(chrX:102197284-156003242)x1 | copy number loss | See cases [RCV000137415] | ChrX:102197284..156003242 [GRCh38] ChrX:101452257..155232907 [GRCh37] ChrX:101338913..154886101 [NCBI36] ChrX:Xq22.1-28 |
pathogenic |
GRCh38/hg38 Xq13.3-28(chrX:76604011-156022206)x1 | copy number loss | See cases [RCV000137138] | ChrX:76604011..156022206 [GRCh38] ChrX:75824420..155251871 [GRCh37] ChrX:75740824..154905065 [NCBI36] ChrX:Xq13.3-28 |
pathogenic |
GRCh38/hg38 Xq21.33-28(chrX:95846285-156003242)x3 | copy number gain | See cases [RCV000138020] | ChrX:95846285..156003242 [GRCh38] ChrX:95101284..155232907 [GRCh37] ChrX:94987940..154886101 [NCBI36] ChrX:Xq21.33-28 |
pathogenic |
GRCh38/hg38 Xq23-27.1(chrX:117260292-140201321)x3 | copy number gain | See cases [RCV000138145] | ChrX:117260292..140201321 [GRCh38] ChrX:116394255..139283477 [GRCh37] ChrX:116278283..139111143 [NCBI36] ChrX:Xq23-27.1 |
pathogenic |
GRCh38/hg38 Xq22.3-28(chrX:106127173-156003242)x1 | copy number loss | See cases [RCV000137887] | ChrX:106127173..156003242 [GRCh38] ChrX:105371166..155232907 [GRCh37] ChrX:105257822..154886101 [NCBI36] ChrX:Xq22.3-28 |
pathogenic |
GRCh38/hg38 Xq21.1-28(chrX:79911061-156003229)x1 | copy number loss | See cases [RCV000138787] | ChrX:79911061..156003229 [GRCh38] ChrX:79166568..155232894 [GRCh37] ChrX:79053224..154886088 [NCBI36] ChrX:Xq21.1-28 |
pathogenic |
GRCh38/hg38 Xq22.3-28(chrX:106465610-156003242)x1 | copy number loss | See cases [RCV000138541] | ChrX:106465610..156003242 [GRCh38] ChrX:105708840..155232907 [GRCh37] ChrX:105595496..154886101 [NCBI36] ChrX:Xq22.3-28 |
pathogenic |
GRCh38/hg38 Xq21.1-28(chrX:82211310-156003229)x1 | copy number loss | See cases [RCV000139400] | ChrX:82211310..156003229 [GRCh38] ChrX:81466759..155232894 [GRCh37] ChrX:81353415..154886088 [NCBI36] ChrX:Xq21.1-28 |
pathogenic |
GRCh38/hg38 Xq21.31-28(chrX:88339926-156003242)x1 | copy number loss | See cases [RCV000139351] | ChrX:88339926..156003242 [GRCh38] ChrX:87594927..155232907 [GRCh37] ChrX:87481583..154886101 [NCBI36] ChrX:Xq21.31-28 |
pathogenic|likely benign |
GRCh38/hg38 Xq11.1-28(chrX:62712219-156003242)x3 | copy number gain | See cases [RCV000139416] | ChrX:62712219..156003242 [GRCh38] ChrX:61931689..155232907 [GRCh37] ChrX:61848414..154886101 [NCBI36] ChrX:Xq11.1-28 |
pathogenic|likely benign |
GRCh38/hg38 Xp22.33-q28(chrX:251880-156004181)x3 | copy number gain | See cases [RCV000139888] | ChrX:251880..156004181 [GRCh38] ChrX:168547..155233846 [GRCh37] ChrX:108547..154887040 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:2299223-155992188)x3 | copy number gain | See cases [RCV000141400] | ChrX:2299223..155992188 [GRCh38] ChrX:2217264..155221853 [GRCh37] ChrX:2227264..154875047 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:20297-156016920)x3 | copy number gain | See cases [RCV000141401] | ChrX:20297..156016920 [GRCh38] ChrX:70297..155246585 [GRCh37] ChrX:10297..154899779 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251880-156004066)x4 | copy number gain | See cases [RCV000140786] | ChrX:251880..156004066 [GRCh38] ChrX:168547..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251880-156004066)x1 | copy number loss | See cases [RCV000140787] | ChrX:251880..156004066 [GRCh38] ChrX:168547..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic|conflicting data from submitters |
GRCh38/hg38 Xq21.1-28(chrX:82096719-156004066)x1 | copy number loss | See cases [RCV000141825] | ChrX:82096719..156004066 [GRCh38] ChrX:81352168..155233731 [GRCh37] ChrX:81238824..154886925 [NCBI36] ChrX:Xq21.1-28 |
pathogenic |
GRCh38/hg38 Xq21.31-28(chrX:89557622-156004066)x1 | copy number loss | See cases [RCV000142016] | ChrX:89557622..156004066 [GRCh38] ChrX:88812621..155233731 [GRCh37] ChrX:88699277..154886925 [NCBI36] ChrX:Xq21.31-28 |
pathogenic |
GRCh38/hg38 Xq24-28(chrX:119297670-156004066)x1 | copy number loss | See cases [RCV000141743] | ChrX:119297670..156004066 [GRCh38] ChrX:118431633..155233731 [GRCh37] ChrX:118315661..154886925 [NCBI36] ChrX:Xq24-28 |
pathogenic |
GRCh38/hg38 Xq21.1-28(chrX:78187188-156004066)x1 | copy number loss | See cases [RCV000142337] | ChrX:78187188..156004066 [GRCh38] ChrX:77442685..155233731 [GRCh37] ChrX:77329341..154886925 [NCBI36] ChrX:Xq21.1-28 |
pathogenic |
GRCh38/hg38 Xq24-28(chrX:118856574-156004066)x1 | copy number loss | See cases [RCV000142137] | ChrX:118856574..156004066 [GRCh38] ChrX:117990537..155233731 [GRCh37] ChrX:117874565..154886925 [NCBI36] ChrX:Xq24-28 |
pathogenic |
GRCh38/hg38 Xq21.2-28(chrX:86626431-156004066)x1 | copy number loss | See cases [RCV000142037] | ChrX:86626431..156004066 [GRCh38] ChrX:85881434..155233731 [GRCh37] ChrX:85768090..154886925 [NCBI36] ChrX:Xq21.2-28 |
pathogenic |
GRCh38/hg38 Xq22.3-28(chrX:106722296-156004066)x1 | copy number loss | See cases [RCV000142190] | ChrX:106722296..156004066 [GRCh38] ChrX:105965526..155233731 [GRCh37] ChrX:105852182..154886925 [NCBI36] ChrX:Xq22.3-28 |
pathogenic |
GRCh38/hg38 Xq23-28(chrX:111050385-156022206)x1 | copy number loss | See cases [RCV000142577] | ChrX:111050385..156022206 [GRCh38] ChrX:110293613..155251871 [GRCh37] ChrX:110180269..154905065 [NCBI36] ChrX:Xq23-28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10701-156003229)x3 | copy number gain | See cases [RCV000142625] | ChrX:10701..156003229 [GRCh38] ChrX:60701..155232894 [GRCh37] ChrX:701..154886088 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xq13.2-28(chrX:74684615-156004066)x1 | copy number loss | See cases [RCV000143424] | ChrX:74684615..156004066 [GRCh38] ChrX:73904450..155233731 [GRCh37] ChrX:73821175..154886925 [NCBI36] ChrX:Xq13.2-28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251879-156004066)x3 | copy number gain | See cases [RCV000143433] | ChrX:251879..156004066 [GRCh38] ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xq13.3-28(chrX:76557425-156004066)x1 | copy number loss | See cases [RCV000143132] | ChrX:76557425..156004066 [GRCh38] ChrX:75777833..155233731 [GRCh37] ChrX:75694237..154886925 [NCBI36] ChrX:Xq13.3-28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x3 | copy number gain | See cases [RCV000148141] | ChrX:10679..156022206 [GRCh38] ChrX:60679..155251871 [GRCh37] ChrX:679..154905065 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:71267-155246643)x3 | copy number gain | See cases [RCV000240122] | ChrX:71267..155246643 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:176426-155250222)x3 | copy number gain | See cases [RCV000239843] | ChrX:176426..155250222 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.2-q28(chrX:13147668-155250222)x3 | copy number gain | See cases [RCV000239798] | ChrX:13147668..155250222 [GRCh37] ChrX:Xp22.2-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:71267-155255839)x1 | copy number loss | See cases [RCV000239832] | ChrX:71267..155255839 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq22.1-24(chrX:99931059-120328627)x1 | copy number loss | Premature ovarian failure [RCV000225336] | ChrX:99931059..120328627 [GRCh37] ChrX:Xq22.1-24 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:70297-155255839)x3 | copy number gain | See cases [RCV000239934] | ChrX:70297..155255839 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:150002-155234036)x2 | copy number gain | See cases [RCV000240106] | ChrX:150002..155234036 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:553069-155233731)x1 | copy number loss | See cases [RCV000446026] | ChrX:553069..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp11.21-q28(chrX:56457791-155233731)x3 | copy number gain | See cases [RCV000511307] | ChrX:56457791..155233731 [GRCh37] ChrX:Xp11.21-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:71267-155234036)x2 | copy number gain | See cases [RCV000239874] | ChrX:71267..155234036 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:176426-155236656)x3 | copy number gain | See cases [RCV000240552] | ChrX:176426..155236656 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:150002-155234036)x3 | copy number gain | See cases [RCV000240314] | ChrX:150002..155234036 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NC_000023.10:g.(?_118986730)_(119603030_?)dup | duplication | Danon disease [RCV000258048] | ChrX:118986730..119603030 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xq11.1-28(chrX:62063537-155250222)x3 | copy number gain | See cases [RCV000240148] | ChrX:62063537..155250222 [GRCh37] ChrX:Xq11.1-28 |
pathogenic |
GRCh37/hg19 Xp22.2-q25(chrX:11692290-121187337)x2 | copy number gain | not provided [RCV000488046] | ChrX:11692290..121187337 [GRCh37] ChrX:Xp22.2-q25 |
uncertain significance |
Single allele | duplication | Syndromic X-linked intellectual disability Lubs type [RCV000768455] | ChrX:15323210..153542100 [GRCh37] ChrX:Xp22.2-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-154930047)x3 | copy number gain | See cases [RCV000449437] | ChrX:168546..154930047 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x3 | copy number gain | See cases [RCV000449330] | ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq21.33-28(chrX:94043221-155246585)x1 | copy number loss | See cases [RCV000449365] | ChrX:94043221..155246585 [GRCh37] ChrX:Xq21.33-28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60701-155246225)x3 | copy number gain | See cases [RCV000446270] | ChrX:60701..155246225 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq13.1-28(chrX:68701338-155233731)x3 | copy number gain | See cases [RCV000446471] | ChrX:68701338..155233731 [GRCh37] ChrX:Xq13.1-28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:2703632-155233731)x1 | copy number loss | See cases [RCV000446712] | ChrX:2703632..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:71267-155255792)x1 | copy number loss | See cases [RCV000446197] | ChrX:71267..155255792 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:318707-155224707)x1 | copy number loss | See cases [RCV000446667] | ChrX:318707..155224707 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq13.3-28(chrX:74787886-155233731)x1 | copy number loss | See cases [RCV000447490] | ChrX:74787886..155233731 [GRCh37] ChrX:Xq13.3-28 |
pathogenic |
GRCh37/hg19 Xp11.1-q28(chrX:58140271-155046703)x3 | copy number gain | See cases [RCV000446151] | ChrX:58140271..155046703 [GRCh37] ChrX:Xp11.1-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x4 | copy number gain | See cases [RCV000446932] | ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155196888)x3 | copy number gain | See cases [RCV000446310] | ChrX:168546..155196888 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155081533)x3 | copy number gain | See cases [RCV000447253] | ChrX:168546..155081533 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168566-155233731)x1 | copy number loss | See cases [RCV000445720] | ChrX:168566..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq22.3-28(chrX:105694656-155224707)x1 | copy number loss | See cases [RCV000445891] | ChrX:105694656..155224707 [GRCh37] ChrX:Xq22.3-28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x1 | copy number loss | See cases [RCV000448393] | ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:70297-155255792)x4 | copy number gain | See cases [RCV000448034] | ChrX:70297..155255792 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq13.2-27.1(chrX:72224362-139262228)x4 | copy number gain | See cases [RCV000448394] | ChrX:72224362..139262228 [GRCh37] ChrX:Xq13.2-27.1 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:70297-155246585)x1 | copy number loss | See cases [RCV000448652] | ChrX:70297..155246585 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_006978.3(RNF113A):c.836A>G (p.His279Arg) | single nucleotide variant | not provided [RCV000485614] | ChrX:119870778 [GRCh38] ChrX:119004741 [GRCh37] ChrX:Xq24 |
likely pathogenic |
GRCh37/hg19 Xp11.21-q28(chrX:55000501-155230750)x3 | copy number gain | See cases [RCV000511787] | ChrX:55000501..155230750 [GRCh37] ChrX:Xp11.21-q28 |
pathogenic |
GRCh37/hg19 Xq23-28(chrX:112474054-155233731)x1 | copy number loss | See cases [RCV000511572] | ChrX:112474054..155233731 [GRCh37] ChrX:Xq23-28 |
pathogenic |
GRCh37/hg19 Xq24-28(chrX:116621104-155233731)x1 | copy number loss | See cases [RCV000511936] | ChrX:116621104..155233731 [GRCh37] ChrX:Xq24-28 |
pathogenic |
GRCh37/hg19 Xq21.1-28(chrX:79862302-155233731)x1 | copy number loss | See cases [RCV000511482] | ChrX:79862302..155233731 [GRCh37] ChrX:Xq21.1-28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168547-155233731) | copy number gain | See cases [RCV000512020] | ChrX:168547..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq21.31-28(chrX:86900388-155233731)x1 | copy number loss | See cases [RCV000511490] | ChrX:86900388..155233731 [GRCh37] ChrX:Xq21.31-28 |
pathogenic |
GRCh37/hg19 Xp11.21-q28(chrX:57511767-155233731)x3 | copy number gain | See cases [RCV000510826] | ChrX:57511767..155233731 [GRCh37] ChrX:Xp11.21-q28 |
pathogenic |
GRCh37/hg19 Xq21.1-28(chrX:78230501-155233731)x1 | copy number loss | See cases [RCV000510820] | ChrX:78230501..155233731 [GRCh37] ChrX:Xq21.1-28 |
pathogenic |
GRCh37/hg19 Xp11.21-q28(chrX:57415659-155233731)x3 | copy number gain | See cases [RCV000512173] | ChrX:57415659..155233731 [GRCh37] ChrX:Xp11.21-q28 |
pathogenic |
GRCh37/hg19 Xq21.33-28(chrX:96499476-151870013)x3 | copy number gain | See cases [RCV000512365] | ChrX:96499476..151870013 [GRCh37] ChrX:Xq21.33-28 |
uncertain significance |
GRCh37/hg19 Xq22.1-28(chrX:98495811-155233731)x1 | copy number loss | See cases [RCV000512372] | ChrX:98495811..155233731 [GRCh37] ChrX:Xq22.1-28 |
pathogenic |
GRCh37/hg19 Xq22.3-28(chrX:107823442-155233731)x1 | copy number loss | not provided [RCV000684373] | ChrX:107823442..155233731 [GRCh37] ChrX:Xq22.3-28 |
pathogenic |
GRCh37/hg19 Xq21.31-28(chrX:91140025-155233731)x1 | copy number loss | not provided [RCV000684357] | ChrX:91140025..155233731 [GRCh37] ChrX:Xq21.31-28 |
pathogenic |
GRCh37/hg19 Xq22.1-28(chrX:99324651-155233731)x1 | copy number loss | not provided [RCV000684363] | ChrX:99324651..155233731 [GRCh37] ChrX:Xq22.1-28 |
pathogenic |
GRCh37/hg19 Xq24-27.1(chrX:117998704-140159954)x3 | copy number gain | not provided [RCV000684377] | ChrX:117998704..140159954 [GRCh37] ChrX:Xq24-27.1 |
pathogenic |
GRCh37/hg19 Xq24(chrX:118053103-119334499)x2 | copy number gain | not provided [RCV000753733] | ChrX:118053103..119334499 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xq24(chrX:118967114-119128106)x3 | copy number gain | not provided [RCV000753738] | ChrX:118967114..119128106 [GRCh37] ChrX:Xq24 |
benign |
NC_000023.10:g.36649710_136649711del100000002insG | indel | Heterotaxy, visceral, 1, X-linked [RCV000754886] | ChrX:36649710..136649711 [GRCh37] ChrX:Xp21.1-q26.3 |
pathogenic |
GRCh37/hg19 Xq11.1-28(chrX:61694576-155254881)x1 | copy number loss | not provided [RCV000753556] | ChrX:61694576..155254881 [GRCh37] ChrX:Xq11.1-28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60814-155254881)x2 | copy number gain | not provided [RCV000753277] | ChrX:60814..155254881 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq13.2-28(chrX:73472626-155254881)x1 | copy number loss | not provided [RCV000753606] | ChrX:73472626..155254881 [GRCh37] ChrX:Xq13.2-28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60262-155245765)x1 | copy number loss | not provided [RCV000753271] | ChrX:60262..155245765 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60262-155245765)x3 | copy number gain | not provided [RCV000753272] | ChrX:60262..155245765 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60814-155236712)x2 | copy number gain | not provided [RCV000753276] | ChrX:60814..155236712 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_006978.3(RNF113A):c.-11A>G | single nucleotide variant | Trichothiodystrophy 5, nonphotosensitive [RCV001796612]|not provided [RCV001611962] | ChrX:119871624 [GRCh38] ChrX:119005587 [GRCh37] ChrX:Xq24 |
benign |
NM_006978.3(RNF113A):c.725G>A (p.Gly242Asp) | single nucleotide variant | not provided [RCV000968442] | ChrX:119870889 [GRCh38] ChrX:119004852 [GRCh37] ChrX:Xq24 |
likely benign |
GRCh37/hg19 Xq24-26.1(chrX:117119895-129850963)x2 | copy number gain | not provided [RCV001007336] | ChrX:117119895..129850963 [GRCh37] ChrX:Xq24-26.1 |
pathogenic |
GRCh37/hg19 Xq22.3-28(chrX:104098124-155233731)x1 | copy number loss | not provided [RCV000846958] | ChrX:104098124..155233731 [GRCh37] ChrX:Xq22.3-28 |
pathogenic |
NM_006978.3(RNF113A):c.264A>G (p.Glu88=) | single nucleotide variant | RNF113A-related condition [RCV003960705]|not provided [RCV000960328] | ChrX:119871350 [GRCh38] ChrX:119005313 [GRCh37] ChrX:Xq24 |
likely benign |
GRCh37/hg19 Xp11.1-q28(chrX:58455352-155233731)x1 | copy number loss | not provided [RCV000846274] | ChrX:58455352..155233731 [GRCh37] ChrX:Xp11.1-q28 |
pathogenic |
GRCh37/hg19 Xq21.1-28(chrX:84387417-155233731)x1 | copy number loss | not provided [RCV001007322] | ChrX:84387417..155233731 [GRCh37] ChrX:Xq21.1-28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x1 | copy number loss | not provided [RCV000848828] | ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq21.32-28(chrX:92814516-155233731)x1 | copy number loss | not provided [RCV000845672] | ChrX:92814516..155233731 [GRCh37] ChrX:Xq21.32-28 |
pathogenic |
GRCh37/hg19 Xp11.21-q28(chrX:54941868-155233731)x1 | copy number loss | not provided [RCV000848218] | ChrX:54941868..155233731 [GRCh37] ChrX:Xp11.21-q28 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x4 | copy number gain | not provided [RCV000846039] | ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq24-28(chrX:118150047-155233731)x1 | copy number loss | not provided [RCV000847838] | ChrX:118150047..155233731 [GRCh37] ChrX:Xq24-28 |
pathogenic |
NM_006978.3(RNF113A):c.1006G>A (p.Asp336Asn) | single nucleotide variant | not provided [RCV000957772] | ChrX:119870608 [GRCh38] ChrX:119004571 [GRCh37] ChrX:Xq24 |
benign |
NC_000023.11:g.119870442T>A | single nucleotide variant | not provided [RCV001620067] | ChrX:119870442 [GRCh38] ChrX:119004405 [GRCh37] ChrX:Xq24 |
benign |
NM_006978.3(RNF113A):c.897_898del (p.Cys299_Asp300delinsTer) | microsatellite | Trichothiodystrophy 5, nonphotosensitive [RCV001093583] | ChrX:119870716..119870717 [GRCh38] ChrX:119004679..119004680 [GRCh37] ChrX:Xq24 |
pathogenic |
GRCh37/hg19 Xq21.1-28(chrX:78444738-155233731)x1 | copy number loss | not provided [RCV001007318] | ChrX:78444738..155233731 [GRCh37] ChrX:Xq21.1-28 |
pathogenic |
NM_006978.3(RNF113A):c.903_910del (p.Gln302fs) | deletion | Trichothiodystrophy 5, nonphotosensitive [RCV001007876] | ChrX:119870704..119870711 [GRCh38] ChrX:119004667..119004674 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:60000-155234966)x1 | copy number loss | not provided [RCV001537933] | ChrX:60000..155234966 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq21.1-28(chrX:77670699-155233731)x1 | copy number loss | See cases [RCV002285075] | ChrX:77670699..155233731 [GRCh37] ChrX:Xq21.1-28 |
pathogenic |
GRCh37/hg19 Xq21.33-28(chrX:94264404-155233731)x1 | copy number loss | not provided [RCV001259012] | ChrX:94264404..155233731 [GRCh37] ChrX:Xq21.33-28 |
pathogenic |
GRCh37/hg19 Xq21.1-25(chrX:77514079-127770854)x1 | copy number loss | not provided [RCV001259005] | ChrX:77514079..127770854 [GRCh37] ChrX:Xq21.1-25 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:1-155270560) | copy number loss | Turner syndrome [RCV002280668] | ChrX:1..155270560 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq24(chrX:118913756-119311583)x2 | copy number gain | not provided [RCV001259494] | ChrX:118913756..119311583 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:1-155270560) | copy number gain | 46,XX sex reversal 1 [RCV002280665]|Hypotonia [RCV002280667]|Trisomy X syndrome [RCV002280666] | ChrX:1..155270560 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq11.1-28(chrX:62685885-155233731) | copy number loss | Turner syndrome [RCV002280672] | ChrX:62685885..155233731 [GRCh37] ChrX:Xq11.1-28 |
pathogenic |
GRCh37/hg19 Xq24-26.1(chrX:117120780-129850994)x3 | copy number gain | not provided [RCV001259495] | ChrX:117120780..129850994 [GRCh37] ChrX:Xq24-26.1 |
pathogenic |
GRCh37/hg19 Xp11.21-q28(chrX:55507789-155198481)x3 | copy number gain | See cases [RCV001263024] | ChrX:55507789..155198481 [GRCh37] ChrX:Xp11.21-q28 |
pathogenic |
GRCh37/hg19 Xp11.21-q28(chrX:56469080-155233731)x3 | copy number gain | not provided [RCV001281359] | ChrX:56469080..155233731 [GRCh37] ChrX:Xp11.21-q28 |
pathogenic |
NM_006978.3(RNF113A):c.484T>C (p.Tyr162His) | single nucleotide variant | Trichothiodystrophy 5, nonphotosensitive [RCV001330341] | ChrX:119871130 [GRCh38] ChrX:119005093 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.763G>A (p.Asp255Asn) | single nucleotide variant | See cases [RCV002252362]|not provided [RCV001327242] | ChrX:119870851 [GRCh38] ChrX:119004814 [GRCh37] ChrX:Xq24 |
likely benign|uncertain significance |
NM_006978.3(RNF113A):c.76G>A (p.Gly26Arg) | single nucleotide variant | Trichothiodystrophy 5, nonphotosensitive [RCV001330342] | ChrX:119871538 [GRCh38] ChrX:119005501 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.279C>T (p.Pro93=) | single nucleotide variant | not provided [RCV001504968] | ChrX:119871335 [GRCh38] ChrX:119005298 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.558C>G (p.Pro186=) | single nucleotide variant | not provided [RCV001497448] | ChrX:119871056 [GRCh38] ChrX:119005019 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.120C>G (p.Pro40=) | single nucleotide variant | not provided [RCV003108717] | ChrX:119871494 [GRCh38] ChrX:119005457 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.860T>C (p.Leu287Pro) | single nucleotide variant | Trichothiodystrophy 5, nonphotosensitive [RCV002466694]|not provided [RCV001754988] | ChrX:119870754 [GRCh38] ChrX:119004717 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x3 | copy number gain | not provided [RCV001829212] | ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_006978.3(RNF113A):c.817G>A (p.Val273Ile) | single nucleotide variant | not provided [RCV001872491] | ChrX:119870797 [GRCh38] ChrX:119004760 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.93A>T (p.Arg31Ser) | single nucleotide variant | not provided [RCV001928801] | ChrX:119871521 [GRCh38] ChrX:119005484 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.323C>G (p.Pro108Arg) | single nucleotide variant | Inborn genetic diseases [RCV002579598]|not provided [RCV002003213] | ChrX:119871291 [GRCh38] ChrX:119005254 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.471C>A (p.Asn157Lys) | single nucleotide variant | not provided [RCV002004315] | ChrX:119871143 [GRCh38] ChrX:119005106 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x1 | copy number loss | not provided [RCV001834509] | ChrX:168546..155233731 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
NM_006978.3(RNF113A):c.197T>A (p.Met66Lys) | single nucleotide variant | not provided [RCV001940853] | ChrX:119871417 [GRCh38] ChrX:119005380 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.136A>G (p.Ser46Gly) | single nucleotide variant | not provided [RCV001962448] | ChrX:119871478 [GRCh38] ChrX:119005441 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.242_244del (p.Gly81del) | deletion | not provided [RCV002033093] | ChrX:119871370..119871372 [GRCh38] ChrX:119005333..119005335 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.256G>C (p.Glu86Gln) | single nucleotide variant | not provided [RCV001991213] | ChrX:119871358 [GRCh38] ChrX:119005321 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.442G>C (p.Glu148Gln) | single nucleotide variant | not provided [RCV002014854] | ChrX:119871172 [GRCh38] ChrX:119005135 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.995C>T (p.Pro332Leu) | single nucleotide variant | not provided [RCV001878522] | ChrX:119870619 [GRCh38] ChrX:119004582 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.102G>A (p.Pro34=) | single nucleotide variant | not provided [RCV002088169] | ChrX:119871512 [GRCh38] ChrX:119005475 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.735G>T (p.Glu245Asp) | single nucleotide variant | not provided [RCV002193233] | ChrX:119870879 [GRCh38] ChrX:119004842 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.384C>T (p.Arg128=) | single nucleotide variant | not provided [RCV002139074] | ChrX:119871230 [GRCh38] ChrX:119005193 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.285T>A (p.Ser95Arg) | single nucleotide variant | RNF113A-related condition [RCV003896030]|not provided [RCV002200645] | ChrX:119871329 [GRCh38] ChrX:119005292 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.423G>A (p.Gln141=) | single nucleotide variant | not provided [RCV002199013] | ChrX:119871191 [GRCh38] ChrX:119005154 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.1023C>T (p.Pro341=) | single nucleotide variant | not provided [RCV002217352] | ChrX:119870591 [GRCh38] ChrX:119004554 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.373G>C (p.Glu125Gln) | single nucleotide variant | not provided [RCV002158172] | ChrX:119871241 [GRCh38] ChrX:119005204 [GRCh37] ChrX:Xq24 |
likely benign |
NC_000023.10:g.(?_117629935)_(119761021_?)dup | duplication | not provided [RCV003109599] | ChrX:117629935..119761021 [GRCh37] ChrX:Xq24 |
uncertain significance |
NC_000023.10:g.(?_118968841)_(119010497_?)del | deletion | not provided [RCV003109601] | ChrX:118968841..119010497 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.508A>G (p.Met170Val) | single nucleotide variant | not provided [RCV003114825] | ChrX:119871106 [GRCh38] ChrX:119005069 [GRCh37] ChrX:Xq24 |
uncertain significance |
NC_000023.10:g.(?_117629935)_(119761021_?)del | deletion | X-linked intellectual disability Cabezas type [RCV003113287] | ChrX:117629935..119761021 [GRCh37] ChrX:Xq24 |
pathogenic |
NM_006978.3(RNF113A):c.315G>C (p.Ser105=) | single nucleotide variant | not provided [RCV003112987] | ChrX:119871299 [GRCh38] ChrX:119005262 [GRCh37] ChrX:Xq24 |
benign |
NC_000023.10:g.(?_118708675)_(119761021_?)dup | duplication | Syndromic X-linked intellectual disability 14 [RCV003123017] | ChrX:118708675..119761021 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.1011G>A (p.Glu337=) | single nucleotide variant | not provided [RCV003118701] | ChrX:119870603 [GRCh38] ChrX:119004566 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.861del (p.Gln288fs) | deletion | Abnormal cerebral morphology [RCV002275918] | ChrX:119870753 [GRCh38] ChrX:119004716 [GRCh37] ChrX:Xq24 |
likely pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:61545-155226048)x2 | copy number gain | Klinefelter syndrome [RCV002282732] | ChrX:61545..155226048 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:200855-155240074) | copy number gain | Klinefelter syndrome [RCV003236730] | ChrX:200855..155240074 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.2-q28(chrX:11522765-155233731)x1 | copy number loss | See cases [RCV002286357] | ChrX:11522765..155233731 [GRCh37] ChrX:Xp22.2-q28 |
pathogenic |
GRCh37/hg19 Xq21.1-24(chrX:76794355-119282836)x3 | copy number gain | not provided [RCV002291535] | ChrX:76794355..119282836 [GRCh37] ChrX:Xq21.1-24 |
pathogenic |
GRCh37/hg19 Xq24(chrX:118718147-119128855)x3 | copy number gain | not provided [RCV002474642] | ChrX:118718147..119128855 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xq24(chrX:118927963-119106405)x3 | copy number gain | not provided [RCV002474744] | ChrX:118927963..119106405 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.155C>T (p.Thr52Ile) | single nucleotide variant | not provided [RCV002727067] | ChrX:119871459 [GRCh38] ChrX:119005422 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.420C>T (p.Ile140=) | single nucleotide variant | not provided [RCV002858503] | ChrX:119871194 [GRCh38] ChrX:119005157 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.749A>G (p.Glu250Gly) | single nucleotide variant | not provided [RCV003014263] | ChrX:119870865 [GRCh38] ChrX:119004828 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.855T>C (p.Cys285=) | single nucleotide variant | not provided [RCV002994333] | ChrX:119870759 [GRCh38] ChrX:119004722 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.453G>A (p.Lys151=) | single nucleotide variant | not provided [RCV003035045] | ChrX:119871161 [GRCh38] ChrX:119005124 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.597C>G (p.Pro199=) | single nucleotide variant | not provided [RCV003021028] | ChrX:119871017 [GRCh38] ChrX:119004980 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.74A>G (p.Lys25Arg) | single nucleotide variant | Inborn genetic diseases [RCV003167643]|RNF113A-related condition [RCV003418587]|not provided [RCV002695474] | ChrX:119871540 [GRCh38] ChrX:119005503 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.28_29delinsCT (p.Ala10Leu) | indel | not provided [RCV003054198] | ChrX:119871585..119871586 [GRCh38] ChrX:119005548..119005549 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.911A>G (p.Asn304Ser) | single nucleotide variant | Inborn genetic diseases [RCV002660480] | ChrX:119870703 [GRCh38] ChrX:119004666 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.357C>A (p.Val119=) | single nucleotide variant | not provided [RCV003038788] | ChrX:119871257 [GRCh38] ChrX:119005220 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.600C>T (p.Asp200=) | single nucleotide variant | not provided [RCV002872125] | ChrX:119871014 [GRCh38] ChrX:119004977 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.382C>T (p.Arg128Cys) | single nucleotide variant | Inborn genetic diseases [RCV002787156]|not provided [RCV003777731] | ChrX:119871232 [GRCh38] ChrX:119005195 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.740A>G (p.Glu247Gly) | single nucleotide variant | not provided [RCV002593467] | ChrX:119870874 [GRCh38] ChrX:119004837 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.441GGA[1] (p.Glu148del) | microsatellite | not provided [RCV003043920] | ChrX:119871168..119871170 [GRCh38] ChrX:119005131..119005133 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.565C>T (p.Leu189=) | single nucleotide variant | not provided [RCV003029349] | ChrX:119871049 [GRCh38] ChrX:119005012 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.952G>A (p.Glu318Lys) | single nucleotide variant | Inborn genetic diseases [RCV002589670]|not provided [RCV002578513] | ChrX:119870662 [GRCh38] ChrX:119004625 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.915C>T (p.Gly305=) | single nucleotide variant | not provided [RCV002899095] | ChrX:119870699 [GRCh38] ChrX:119004662 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.682C>T (p.His228Tyr) | single nucleotide variant | not provided [RCV002681036] | ChrX:119870932 [GRCh38] ChrX:119004895 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.964G>A (p.Ala322Thr) | single nucleotide variant | not provided [RCV002607444] | ChrX:119870650 [GRCh38] ChrX:119004613 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.401T>C (p.Phe134Ser) | single nucleotide variant | not provided [RCV002605800] | ChrX:119871213 [GRCh38] ChrX:119005176 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.975G>T (p.Glu325Asp) | single nucleotide variant | not provided [RCV002608928] | ChrX:119870639 [GRCh38] ChrX:119004602 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.101C>T (p.Pro34Leu) | single nucleotide variant | Inborn genetic diseases [RCV003281412] | ChrX:119871513 [GRCh38] ChrX:119005476 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.872G>A (p.Arg291His) | single nucleotide variant | Inborn genetic diseases [RCV003386060] | ChrX:119870742 [GRCh38] ChrX:119004705 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.196A>G (p.Met66Val) | single nucleotide variant | not provided [RCV003543678] | ChrX:119871418 [GRCh38] ChrX:119005381 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xq24-28(chrX:118576752-155233731)x1 | copy number loss | not provided [RCV003483929] | ChrX:118576752..155233731 [GRCh37] ChrX:Xq24-28 |
pathogenic |
GRCh37/hg19 Xq23-25(chrX:110921170-124327177)x2 | copy number gain | not provided [RCV003483973] | ChrX:110921170..124327177 [GRCh37] ChrX:Xq23-25 |
pathogenic |
GRCh37/hg19 Xq21.31-25(chrX:91274467-126799984)x1 | copy number loss | not provided [RCV003483927] | ChrX:91274467..126799984 [GRCh37] ChrX:Xq21.31-25 |
pathogenic |
NM_006978.3(RNF113A):c.992T>G (p.Leu331Trp) | single nucleotide variant | RNF113A-related condition [RCV003406254] | ChrX:119870622 [GRCh38] ChrX:119004585 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.562C>A (p.His188Asn) | single nucleotide variant | not provided [RCV003441270] | ChrX:119871052 [GRCh38] ChrX:119005015 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.58A>G (p.Lys20Glu) | single nucleotide variant | not provided [RCV003695480] | ChrX:119871556 [GRCh38] ChrX:119005519 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.466A>G (p.Ile156Val) | single nucleotide variant | not provided [RCV003830934] | ChrX:119871148 [GRCh38] ChrX:119005111 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.131G>A (p.Gly44Asp) | single nucleotide variant | not provided [RCV003877707] | ChrX:119871483 [GRCh38] ChrX:119005446 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.325G>A (p.Val109Met) | single nucleotide variant | not provided [RCV003882487] | ChrX:119871289 [GRCh38] ChrX:119005252 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.445G>T (p.Asp149Tyr) | single nucleotide variant | not provided [RCV003880983] | ChrX:119871169 [GRCh38] ChrX:119005132 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.816A>C (p.Pro272=) | single nucleotide variant | not provided [RCV003693220] | ChrX:119870798 [GRCh38] ChrX:119004761 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.559G>A (p.Glu187Lys) | single nucleotide variant | not provided [RCV003660356] | ChrX:119871055 [GRCh38] ChrX:119005018 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.801G>A (p.Gln267=) | single nucleotide variant | not provided [RCV003545144] | ChrX:119870813 [GRCh38] ChrX:119004776 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.375G>C (p.Glu125Asp) | single nucleotide variant | not provided [RCV003669462] | ChrX:119871239 [GRCh38] ChrX:119005202 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.371C>T (p.Thr124Ile) | single nucleotide variant | not provided [RCV003839927] | ChrX:119871243 [GRCh38] ChrX:119005206 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.993G>A (p.Leu331=) | single nucleotide variant | RNF113A-related condition [RCV003956604]|not provided [RCV003839697] | ChrX:119870621 [GRCh38] ChrX:119004584 [GRCh37] ChrX:Xq24 |
likely benign|uncertain significance |
NM_006978.3(RNF113A):c.525C>T (p.Ser175=) | single nucleotide variant | not provided [RCV003837946] | ChrX:119871089 [GRCh38] ChrX:119005052 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.633C>T (p.Cys211=) | single nucleotide variant | not provided [RCV003668988] | ChrX:119870981 [GRCh38] ChrX:119004944 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.330A>C (p.Gly110=) | single nucleotide variant | not provided [RCV003667453] | ChrX:119871284 [GRCh38] ChrX:119005247 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.681G>A (p.Lys227=) | single nucleotide variant | not provided [RCV003866710] | ChrX:119870933 [GRCh38] ChrX:119004896 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.803G>C (p.Ser268Thr) | single nucleotide variant | not provided [RCV003733005] | ChrX:119870811 [GRCh38] ChrX:119004774 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xq22.2-28(chrX:103405294-155233731) | copy number loss | not specified [RCV003986202] | ChrX:103405294..155233731 [GRCh37] ChrX:Xq22.2-28 |
pathogenic |
GRCh37/hg19 Xq24(chrX:118982260-119101845) | copy number gain | not specified [RCV003986261] | ChrX:118982260..119101845 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.452A>G (p.Lys151Arg) | single nucleotide variant | not provided [RCV003822945] | ChrX:119871162 [GRCh38] ChrX:119005125 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.445G>A (p.Asp149Asn) | single nucleotide variant | not provided [RCV003844309] | ChrX:119871169 [GRCh38] ChrX:119005132 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.899A>T (p.Asp300Val) | single nucleotide variant | not provided [RCV003863424] | ChrX:119870715 [GRCh38] ChrX:119004678 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.834G>A (p.Arg278=) | single nucleotide variant | not provided [RCV003556592] | ChrX:119870780 [GRCh38] ChrX:119004743 [GRCh37] ChrX:Xq24 |
likely benign |
NM_006978.3(RNF113A):c.363G>A (p.Glu121=) | single nucleotide variant | not provided [RCV003680942] | ChrX:119871251 [GRCh38] ChrX:119005214 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xq12-28(chrX:67292994-155240074)x3 | copy number gain | not provided [RCV003885530] | ChrX:67292994..155240074 [GRCh37] ChrX:Xq12-28 |
pathogenic |
NM_006978.3(RNF113A):c.118C>G (p.Pro40Ala) | single nucleotide variant | RNF113A-related condition [RCV003419041] | ChrX:119871496 [GRCh38] ChrX:119005459 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh38/hg38 Xp22.33-q28(chrX:20297-155999253)x3 | copy number gain | See cases [RCV000134564] | ChrX:20297..155999253 [GRCh38] ChrX:70297..155228918 [GRCh37] ChrX:10297..154882112 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10701-156003242)x1 | copy number loss | See cases [RCV000133947] | ChrX:10701..156003242 [GRCh38] ChrX:60701..155232907 [GRCh37] ChrX:701..154886101 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters |
GRCh38/hg38 Xp22.33-q28(chrX:10701-156003242)x3 | copy number gain | See cases [RCV000133911] | ChrX:10701..156003242 [GRCh38] ChrX:60701..155232907 [GRCh37] ChrX:701..154886101 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic|likely pathogenic|conflicting data from submitters |
GRCh38/hg38 Xp22.33-q28(chrX:20297-156026127)x1 | copy number loss | See cases [RCV000135321] | ChrX:20297..156026127 [GRCh38] ChrX:70297..155255792 [GRCh37] ChrX:10297..154908986 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp21.1-q28(chrX:36237706-156022206)x1 | copy number loss | See cases [RCV000135552] | ChrX:36237706..156022206 [GRCh38] ChrX:36255823..155251871 [GRCh37] ChrX:36165744..154905065 [NCBI36] ChrX:Xp21.1-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:2782275-155611794)x2 | copy number gain | See cases [RCV000136841] | ChrX:2782275..155611794 [GRCh38] ChrX:2700316..154785891 [GRCh37] ChrX:2710316..154494649 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xq11.1-28(chrX:62561604-156003242)x3 | copy number gain | See cases [RCV000137553] | ChrX:62561604..156003242 [GRCh38] ChrX:61781074..155232907 [GRCh37] ChrX:61697799..154886101 [NCBI36] ChrX:Xq11.1-28 |
pathogenic |
GRCh38/hg38 Xp22.2-q27.3(chrX:13020141-143473520)x1 | copy number loss | See cases [RCV000138678] | ChrX:13020141..143473520 [GRCh38] ChrX:13038260..142561303 [GRCh37] ChrX:12948181..142388969 [NCBI36] ChrX:Xp22.2-q27.3 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:1085618-155699644)x1 | copy number loss | See cases [RCV000139278] | ChrX:1085618..155699644 [GRCh38] ChrX:1118268..154929305 [GRCh37] ChrX:1038268..154582499 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp11.22-q28(chrX:53144751-156003242)x1 | copy number loss | See cases [RCV000143349] | ChrX:53144751..156003242 [GRCh38] ChrX:53321095..155232907 [GRCh37] ChrX:53190658..154886101 [NCBI36] ChrX:Xp11.22-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251879-156004066)x1 | copy number loss | See cases [RCV000143441] | ChrX:251879..156004066 [GRCh38] ChrX:168546..155233731 [GRCh37] ChrX:108546..154886925 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:251880-156004066)x3 | copy number gain | See cases [RCV000143219] | ChrX:251880..156004066 [GRCh38] ChrX:168547..155233731 [GRCh37] ChrX:108547..154886925 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh38/hg38 Xp22.33-q28(chrX:10679-156022206)x1 | copy number loss | See cases [RCV000148135] | ChrX:10679..156022206 [GRCh38] ChrX:60679..155251871 [GRCh37] ChrX:679..154905065 [NCBI36] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq11.1-28(chrX:62063537-155246643)x3 | copy number gain | See cases [RCV000240143] | ChrX:62063537..155246643 [GRCh37] ChrX:Xq11.1-28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:71267-155224766)x1 | copy number loss | See cases [RCV000239902] | ChrX:71267..155224766 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:60701-155246271)x3 | copy number gain | See cases [RCV000239989] | ChrX:60701..155246271 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:225816-155234036)x2 | copy number gain | See cases [RCV000240464] | ChrX:225816..155234036 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:2707626-155250222)x2 | copy number gain | See cases [RCV000240541] | ChrX:2707626..155250222 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:70297-155255792) | copy number loss | See cases [RCV000449461] | ChrX:70297..155255792 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xq21.33-26.1(chrX:95498487-129063677)x3 | copy number gain | See cases [RCV000446318] | ChrX:95498487..129063677 [GRCh37] ChrX:Xq21.33-26.1 |
pathogenic |
GRCh37/hg19 Xp11.21-q28(chrX:55532799-150239235)x1 | copy number loss | See cases [RCV000448870] | ChrX:55532799..150239235 [GRCh37] ChrX:Xp11.21-q28 |
pathogenic |
GRCh37/hg19 Xp22.33-q28(chrX:168547-151304063)x1 | copy number loss | See cases [RCV000510382] | ChrX:168547..151304063 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
GRCh37/hg19 Xp21.2-q28(chrX:31088082-155233731)x1 | copy number loss | See cases [RCV000511413] | ChrX:31088082..155233731 [GRCh37] ChrX:Xp21.2-q28 |
pathogenic|uncertain significance |
GRCh37/hg19 Xq24(chrX:118749182-119039684)x3 | copy number gain | not provided [RCV000684379] | ChrX:118749182..119039684 [GRCh37] ChrX:Xq24 |
uncertain significance |
GRCh37/hg19 Xp22.33-q28(chrX:181779-155171702)x1 | copy number loss | not provided [RCV000753278] | ChrX:181779..155171702 [GRCh37] ChrX:Xp22.33-q28 |
pathogenic |
Single allele | duplication | Autism [RCV000754365] | ChrX:1..156040895 [GRCh38] ChrX:Xp22.33-q28 |
pathogenic |
NM_006978.3(RNF113A):c.1019T>G (p.Ile340Ser) | single nucleotide variant | not provided [RCV002469618] | ChrX:119870595 [GRCh38] ChrX:119004558 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.89G>A (p.Arg30His) | single nucleotide variant | not provided [RCV002639714] | ChrX:119871525 [GRCh38] ChrX:119005488 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.89G>T (p.Arg30Leu) | single nucleotide variant | Inborn genetic diseases [RCV003283076] | ChrX:119871525 [GRCh38] ChrX:119005488 [GRCh37] ChrX:Xq24 |
uncertain significance |
NM_006978.3(RNF113A):c.890_891del (p.Tyr297fs) | deletion | Trichothiodystrophy 5, nonphotosensitive [RCV003325934] | ChrX:119870723..119870724 [GRCh38] ChrX:119004686..119004687 [GRCh37] ChrX:Xq24 |
likely pathogenic |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
SHGC-57117 |
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RH47820 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | sensory system | visual system | adipose tissue | appendage | entire extraembryonic component | pharyngeal arch | |
High | ||||||||||||||||||
Medium | 2328 | 2252 | 1535 | 464 | 1884 | 310 | 3904 | 1286 | 3023 | 348 | 1164 | 1600 | 166 | 1134 | 2341 | 3 | ||
Low | 111 | 738 | 191 | 160 | 67 | 155 | 453 | 911 | 709 | 71 | 294 | 13 | 7 | 1 | 70 | 447 | 3 | 2 |
Below cutoff | 1 | 1 | 2 | 1 |
RefSeq Transcripts | NG_009381 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NG_021227 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_006978 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC002477 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AF086291 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK314778 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AW001915 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC000832 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC020556 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC128440 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BT007175 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH471161 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CP068255 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CS185534 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
X98253 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENST00000371442 ⟹ ENSP00000360497 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_006978 ⟹ NP_008909 | ||||||||||||||||||||||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_008909 | (Get FASTA) | NCBI Sequence Viewer |
GenBank Protein | AAB67605 | (Get FASTA) | NCBI Sequence Viewer |
AAH00832 | (Get FASTA) | NCBI Sequence Viewer | |
AAH20556 | (Get FASTA) | NCBI Sequence Viewer | |
AAI28441 | (Get FASTA) | NCBI Sequence Viewer | |
AAP35839 | (Get FASTA) | NCBI Sequence Viewer | |
BAG37314 | (Get FASTA) | NCBI Sequence Viewer | |
CAA66907 | (Get FASTA) | NCBI Sequence Viewer | |
CAJ42715 | (Get FASTA) | NCBI Sequence Viewer | |
EAW89841 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSP00000360497 | ||
ENSP00000360497.2 | |||
GenBank Protein | O15541 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_008909 ⟸ NM_006978 |
- UniProtKB: | B2RBR7 (UniProtKB/Swiss-Prot), O15541 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | ENSP00000360497 ⟸ ENST00000371442 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-O15541-F1-model_v2 | AlphaFold | O15541 | 1-343 | view protein structure |
RGD ID: | 6809180 | ||||||||
Promoter ID: | HG_KWN:67898 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, Jurkat, K562, Lymphoblastoid, NB4 | ||||||||
Transcripts: | NM_006978 | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | HGNC:12974 | AgrOrtholog |
COSMIC | RNF113A | COSMIC |
Ensembl Genes | ENSG00000125352 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Transcript | ENST00000371442 | ENTREZGENE |
ENST00000371442.4 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | 3.30.40.10 | UniProtKB/Swiss-Prot |
GTEx | ENSG00000125352 | GTEx |
HGNC ID | HGNC:12974 | ENTREZGENE |
Human Proteome Map | RNF113A | Human Proteome Map |
InterPro | CWC24-like | UniProtKB/Swiss-Prot |
Znf_CCCH | UniProtKB/Swiss-Prot | |
Znf_CCCH_sf | UniProtKB/Swiss-Prot | |
Znf_RING | UniProtKB/Swiss-Prot | |
Znf_RING/FYVE/PHD | UniProtKB/Swiss-Prot | |
Znf_RING_CS | UniProtKB/Swiss-Prot | |
KEGG Report | hsa:7737 | UniProtKB/Swiss-Prot |
NCBI Gene | 7737 | ENTREZGENE |
OMIM | 300951 | OMIM |
PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF113A | UniProtKB/Swiss-Prot |
PTHR12930 | UniProtKB/Swiss-Prot | |
Pfam | zf-C3HC4_3 | UniProtKB/Swiss-Prot |
zf-CCCH | UniProtKB/Swiss-Prot | |
PharmGKB | PA37556 | PharmGKB |
PROSITE | ZF_C3H1 | UniProtKB/Swiss-Prot |
ZF_RING_1 | UniProtKB/Swiss-Prot | |
ZF_RING_2 | UniProtKB/Swiss-Prot | |
SMART | RING | UniProtKB/Swiss-Prot |
ZnF_C3H1 | UniProtKB/Swiss-Prot | |
Superfamily-SCOP | RING/U-box | UniProtKB/Swiss-Prot |
SSF90229 | UniProtKB/Swiss-Prot | |
UniProt | B2RBR7 | ENTREZGENE |
O15541 | ENTREZGENE, UniProtKB/Swiss-Prot | |
UniProt Secondary | B2RBR7 | UniProtKB/Swiss-Prot |