ONTOLOGY REPORT - ANNOTATIONS |
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Term: | extracellular matrix |
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Accession: | GO:0031012
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browse the term
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Definition: | A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues. |
Synonyms: | exact_synonym: | proteinaceous extracellular matrix |
| narrow_synonym: | matrisome |
| alt_id: | GO:0005578 |
| xref: | NIF_Subcellular:nlx_subcell_20090513; Wikipedia:Extracellular_matrix |
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Abi3bp
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ABI family member 3 binding protein
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located_in
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ISO IEA
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(PMID:18757743) GO_REF:0000107
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RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
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G
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Acan
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aggrecan
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located_in
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ISO IEA
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(PMID:14620382), (PMID:16079159) GO_REF:0000107 GO_REF:0000117
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RGD Ensembl UniProt |
PMID:14620382 PMID:16079159 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627
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G
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Adamts1
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ADAM metallopeptidase with thrombospondin type 1 motif, 1
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located_in is_active_in
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ISO IEA IBA
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(PMID:12907688), (PMID:9593739) GO_REF:0000107 GO_REF:0000002 GO_REF:0000033
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RGD Ensembl InterPro GO_Central |
PMID:9593739 PMID:12907688 |
GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 |
NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103
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G
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Adamts10
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ADAM metallopeptidase with thrombospondin type 1 motif, 10
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 7:14,331,659...14,361,620
Ensembl chr 7:14,331,745...14,361,620
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G
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Adamts12
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ADAM metallopeptidase with thrombospondin type 1 motif, 12
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
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G
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Adamts13
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ADAM metallopeptidase with thrombospondin type 1 motif, 13
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 3:10,299,264...10,338,464
Ensembl chr 3:10,300,028...10,346,687
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G
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Adamts14
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ADAM metallopeptidase with thrombospondin type 1 motif, 14
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr20:29,143,029...29,219,846
Ensembl chr20:29,144,354...29,219,866
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G
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Adamts15
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ADAM metallopeptidase with thrombospondin type 1 motif, 15
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 8:29,307,864...29,331,249
Ensembl chr 8:29,307,865...29,331,249
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G
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Adamts16
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ADAM metallopeptidase with thrombospondin type 1 motif, 16
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 1:32,430,436...32,562,481
Ensembl chr 1:32,430,436...32,560,494
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G
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Adamts17
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ADAM metallopeptidase with thrombospondin type 1 motif, 17
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 1:120,445,800...120,768,204
Ensembl chr 1:120,445,749...120,768,202
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G
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Adamts18
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ADAM metallopeptidase with thrombospondin type 1 motif, 18
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr19:41,686,951...41,840,035
Ensembl chr19:41,688,617...41,839,781
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G
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Adamts19
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ADAM metallopeptidase with thrombospondin type 1 motif, 19
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr18:52,346,448...52,531,245
Ensembl chr18:52,347,428...52,530,509
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G
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Adamts2
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ADAM metallopeptidase with thrombospondin type 1 motif, 2
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located_in is_active_in
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ISO IEA IBA
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(PMID:16556917) GO_REF:0000107 GO_REF:0000033
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RGD Ensembl GO_Central |
PMID:16556917 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:34,920,992...35,126,465
Ensembl chr10:34,921,049...35,123,821
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G
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Adamts20
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ADAM metallopeptidase with thrombospondin type 1 motif, 20
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 7:125,396,227...125,528,020
Ensembl chr 7:125,397,734...125,527,777
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G
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Adamts3
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ADAM metallopeptidase with thrombospondin type 1, motif 3
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr14:18,231,128...18,437,771
Ensembl chr14:18,231,165...18,435,556
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G
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Adamts4
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ADAM metallopeptidase with thrombospondin type 1 motif, 4
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr13:83,670,556...83,680,045
Ensembl chr13:83,670,183...83,680,065
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G
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Adamts5
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ADAM metallopeptidase with thrombospondin type 1 motif, 5
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205
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G
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Adamts6
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ADAM metallopeptidase with thrombospondin type 1 motif, 6
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 2:35,421,483...35,633,305
Ensembl chr 2:35,421,510...35,633,298
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G
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Adamts7
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ADAM metallopeptidase with thrombospondin type 1 motif, 7
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located_in is_active_in
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ISO IBA
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(PMID:15192113) GO_REF:0000033
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RGD GO_Central |
PMID:15192113 |
GO_REF:0000033 |
NCBI chr 8:90,704,727...90,744,333
Ensembl chr 8:90,704,727...90,744,328
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G
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Adamts8
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ADAM metallopeptidase with thrombospondin type 1 motif, 8
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 8:29,349,078...29,368,413
Ensembl chr 8:29,349,114...29,368,404
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G
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Adamts9
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ADAM metallopeptidase with thrombospondin type 1 motif, 9
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located_in is_active_in
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ISO IBA
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(PMID:12514189) GO_REF:0000033
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RGD GO_Central |
PMID:12514189 |
GO_REF:0000033 |
NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
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G
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Adamtsl1
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ADAMTS-like 1
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 5:99,964,406...100,919,786
Ensembl chr 5:99,964,486...100,918,384
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G
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Adamtsl2
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ADAMTS-like 2
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located_in is_active_in
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ISO IEA IBA
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(PMID:17509843) GO_REF:0000107 GO_REF:0000033
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RGD Ensembl GO_Central |
PMID:17509843 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 3:10,397,774...10,434,557
Ensembl chr 3:10,404,626...10,434,554
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G
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Adamtsl3
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ADAMTS-like 3
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 1:136,288,793...136,596,986
Ensembl chr 1:136,288,793...136,596,986
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G
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Adamtsl4
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ADAMTS-like 4
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located_in
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ISO IEA
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(PMID:18757743) GO_REF:0000107
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RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr 2:183,235,634...183,247,091
Ensembl chr 2:183,235,646...183,246,848
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G
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Adamtsl5
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ADAMTS-like 5
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located_in
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ISO
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(PMID:23010571)
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RGD |
PMID:23010571 |
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NCBI chr 7:9,362,623...9,371,248
Ensembl chr 7:9,363,237...9,370,285
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G
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Ahsg
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alpha-2-HS-glycoprotein
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr11:78,121,388...78,127,998
Ensembl chr11:78,117,918...78,145,999
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G
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Alpl
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alkaline phosphatase, biomineralization associated
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located_in
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ISO IEA
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(PMID:19874193) GO_REF:0000107
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RGD Ensembl |
PMID:19874193 |
GO_REF:0000107 |
NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446
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G
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Amtn
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amelotin
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located_in
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IDA IEA ISO
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PMID:16787391 GO_REF:0000107 (PMID:16304441)
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Ensembl RGD |
PMID:16304441 PMID:16787391 |
GO_REF:0000107, RGD:2304068 |
NCBI chr14:19,648,624...19,661,181
Ensembl chr14:19,648,625...19,661,181
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G
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Apoe
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apolipoprotein E
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located_in
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ISS ISO IEA
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GO_REF:0000024 (PMID:9488694) GO_REF:0000107
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UniProt RGD Ensembl |
PMID:9488694 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
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G
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Aspn
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asporin
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located_in
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ISO IEA
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(PMID:17827158) GO_REF:0000107 (PMID:11152692)
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RGD Ensembl |
PMID:11152692 PMID:17827158 |
GO_REF:0000107 |
NCBI chr17:15,079,910...15,104,369
Ensembl chr17:15,080,639...15,104,041
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G
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Bcan
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brevican
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located_in
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ISO IEA
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(PMID:19141078) GO_REF:0000107 GO_REF:0000117
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RGD Ensembl UniProt |
PMID:19141078 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460
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G
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Bgn
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biglycan
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located_in
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IEA ISO
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GO_REF:0000107 (PMID:16810681), (PMID:23900597)
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Ensembl RGD |
PMID:16810681 PMID:23900597 |
GO_REF:0000107 |
NCBI chr X:151,197,296...151,209,458
Ensembl chr X:151,197,273...151,209,461
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G
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Bmper
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BMP-binding endothelial regulator
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 8:21,732,225...21,977,261
Ensembl chr 8:21,732,225...21,977,256
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G
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C20h6orf15
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similar to human chromosome 6 open reading frame 15
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located_in is_active_in
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ISO IBA
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(PMID:18757743) GO_REF:0000033
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RGD GO_Central |
PMID:18757743 |
GO_REF:0000033 |
NCBI chr20:3,172,330...3,173,886
Ensembl chr20:3,172,330...3,173,886
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G
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Ccbe1
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collagen and calcium binding EGF domains 1
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located_in
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ISO IEA
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(PMID:21778431) GO_REF:0000107
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RGD Ensembl |
PMID:21778431 |
GO_REF:0000107 |
NCBI chr18:59,579,851...59,823,977
Ensembl chr18:59,580,768...59,824,400
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G
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Ccdc80
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coiled-coil domain containing 80
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located_in
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ISO IEA
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(PMID:18757743) GO_REF:0000107
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RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr11:55,685,165...55,718,827
Ensembl chr11:55,685,872...55,719,137
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G
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Ccn1
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cellular communication network factor 1
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
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G
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Ccn2
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cellular communication network factor 2
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is_active_in located_in
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IBA ISO
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GO_REF:0000033 (PMID:9184077)
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GO_Central RGD |
PMID:9184077 |
GO_REF:0000033 |
NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
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G
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Ccn3
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cellular communication network factor 3
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019
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G
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Ccn4
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cellular communication network factor 4
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248
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G
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Ccn5
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cellular communication network factor 5
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 3:152,491,247...152,502,639
Ensembl chr 3:152,491,220...152,502,636
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G
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Ccn6
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cellular communication network factor 6
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr20:42,569,309...42,585,126
Ensembl chr20:42,569,309...42,585,126
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G
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Cd180
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CD180 molecule
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 2:33,855,940...33,870,046
Ensembl chr 2:33,855,991...33,899,936
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G
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Chad
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chondroadherin
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr10:79,512,170...79,515,941
Ensembl chr10:79,511,931...79,515,940
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G
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Chadl
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chondroadherin-like
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 7:113,205,323...113,218,678
Ensembl chr 7:113,210,748...113,217,272
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G
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Clic3
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chloride intracellular channel 3
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located_in
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ISO
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(PMID:28198360)
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RGD |
PMID:28198360 |
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NCBI chr 3:8,271,416...8,274,023
Ensembl chr 3:8,272,097...8,274,018
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G
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Coch
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cochlin
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located_in
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ISO
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(PMID:11709536)
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RGD |
PMID:11709536 |
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NCBI chr 6:69,031,139...69,045,124
Ensembl chr 6:69,031,167...69,045,109
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G
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Col10a1
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collagen type X alpha 1 chain
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located_in
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ISO IEA
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(PMID:22206015), (PMID:9449075) GO_REF:0000107
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RGD Ensembl |
PMID:9449075 PMID:22206015 |
GO_REF:0000107 |
NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494
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G
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Col11a1
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collagen type XI alpha 1 chain
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located_in
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ISO
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(PMID:17029294), (PMID:24735995)
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RGD |
PMID:17029294 PMID:24735995 |
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NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
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G
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Col1a1
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collagen type I alpha 1 chain
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located_in
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ISO IEA
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(PMID:10878613), (PMID:17029294), (PMID:2209468), (PMID:7573384), (PMID:7589890), (PMID:7629088), (PMID:8906420), (PMID:8984825) GO_REF:0000107
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RGD Ensembl |
PMID:2209468 PMID:7573384 PMID:7589890 PMID:7629088 PMID:8906420 PMID:8984825 PMID:10878613 PMID:17029294 More...
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GO_REF:0000107 |
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
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G
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Col26a1
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collagen type XXVI alpha 1 chain
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located_in
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ISO
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(PMID:12221002)
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RGD |
PMID:12221002 |
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NCBI chr12:19,792,693...19,938,556
Ensembl chr12:19,792,728...19,938,556
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G
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Col2a1
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collagen type II alpha 1 chain
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located_in
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ISO IEA
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(PMID:16079159), (PMID:1879364), (PMID:21624478), (PMID:22206015), (PMID:23900597), (PMID:24191021), (PMID:9449075) GO_REF:0000107
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RGD Ensembl |
PMID:1879364 PMID:9449075 PMID:16079159 PMID:21624478 PMID:22206015 PMID:23900597 PMID:24191021 More...
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GO_REF:0000107 |
NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546
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G
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Col3a1
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collagen type III alpha 1 chain
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located_in
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ISO
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(PMID:10022501), (PMID:2209468), (PMID:8984825)
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RGD |
PMID:2209468 PMID:8984825 PMID:10022501 |
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NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
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G
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Col5a1
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collagen type V alpha 1 chain
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located_in
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ISO
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(PMID:17029294)
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RGD |
PMID:17029294 |
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NCBI chr 3:31,606,475...31,755,097
Ensembl chr 3:11,208,512...11,354,588
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G
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Col6a1
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collagen type VI alpha 1 chain
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located_in is_active_in
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ISO IEA
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(PMID:16810681), (PMID:8806434) GO_REF:0000107 MGI:2153356 (PMID:19248115), (PMID:20951202), (PMID:23300779)
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RGD Ensembl |
PMID:8806434 PMID:16810681 PMID:19248115 PMID:20951202 PMID:23300779 |
GO_REF:0000107 |
NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597
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G
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Col6a2
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collagen type VI alpha 2 chain
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located_in
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ISO IEA
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(PMID:16810681), (PMID:8806434) GO_REF:0000107
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RGD Ensembl |
PMID:8806434 PMID:16810681 |
GO_REF:0000107 |
NCBI chr20:12,021,676...12,049,425
Ensembl chr20:12,021,767...12,057,564
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G
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Col6a3
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collagen type VI alpha 3 chain
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located_in
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ISO IEA
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(PMID:18400749) GO_REF:0000107 (PMID:16810681), (PMID:8806434)
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RGD Ensembl |
PMID:8806434 PMID:16810681 PMID:18400749 |
GO_REF:0000107 |
NCBI chr 9:91,361,578...91,439,434
Ensembl chr 9:91,361,583...91,439,471
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G
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Col6a5
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collagen type VI alpha 5 chain
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located_in
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ISO
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(PMID:24563484)
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RGD |
PMID:24563484 |
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NCBI chr 8:106,483,806...106,584,114
Ensembl chr 8:106,483,799...106,584,113
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G
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Col6a6
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collagen type VI alpha 6 chain
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located_in
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ISO IEA
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(PMID:18400749) GO_REF:0000107
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RGD Ensembl |
PMID:18400749 |
GO_REF:0000107 |
NCBI chr 8:106,318,010...106,473,419
Ensembl chr 8:106,306,422...106,473,472
|
|
G
|
Comp
|
cartilage oligomeric matrix protein
|
located_in
|
ISO IEA
|
(PMID:18285447) GO_REF:0000107
|
RGD Ensembl |
PMID:18285447 |
GO_REF:0000107 |
NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
|
|
G
|
Cpn2
|
carboxypeptidase N subunit 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr11:70,486,054...70,495,937
Ensembl chr11:70,486,057...70,496,472
|
|
G
|
Crispld2
|
cysteine-rich secretory protein LCCL domain containing 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr19:48,053,153...48,111,485
Ensembl chr19:48,053,287...48,110,465
|
|
G
|
Cthrc1
|
collagen triple helix repeat containing 1
|
located_in
|
IDA
|
PMID:15618538
|
MGI |
PMID:15618538 |
RGD:1547887 |
NCBI chr 7:70,122,474...70,132,756
Ensembl chr 7:70,122,474...70,132,756
|
|
G
|
Dmbt1
|
deleted in malignant brain tumors 1
|
located_in is_active_in
|
ISS ISO IBA
|
GO_REF:0000024 (PMID:15452149), (PMID:9247472) GO_REF:0000033
|
UniProt RGD GO_Central |
PMID:9247472 PMID:15452149 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478
|
|
G
|
Dmp1
|
dentin matrix acidic phosphoprotein 1
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:19001636)
|
GO_Central RGD |
PMID:19001636 |
GO_REF:0000033 |
NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
|
|
G
|
Dspp
|
dentin sialophosphoprotein
|
located_in
|
ISO
|
(PMID:19001636), (PMID:22798071)
|
RGD |
PMID:19001636 PMID:22798071 |
|
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
|
|
G
|
Ecm2
|
extracellular matrix protein 2
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:18757743) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:18757743 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr17:15,120,194...15,152,536
Ensembl chr17:15,120,196...15,152,516
|
|
G
|
Efemp1
|
EGF containing fibulin extracellular matrix protein 1
|
located_in
|
ISO IEA
|
(PMID:35998264) GO_REF:0000107
|
RGD Ensembl |
PMID:35998264 |
GO_REF:0000107 |
NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018
|
|
G
|
Efemp2
|
EGF containing fibulin extracellular matrix protein 2
|
located_in
|
ISO IEA
|
(PMID:20389311), (PMID:27339457) GO_REF:0000107 (PMID:17324935), (PMID:26690653)
|
RGD Ensembl |
PMID:17324935 PMID:20389311 PMID:26690653 PMID:27339457 |
GO_REF:0000107 |
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
|
|
G
|
Egfl6
|
EGF-like-domain, multiple 6
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr X:27,884,087...27,942,044
Ensembl chr X:27,884,125...27,942,044
|
|
G
|
Egflam
|
EGF-like, fibronectin type III and laminin G domains
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr 2:56,301,945...56,476,665
Ensembl chr 2:56,302,566...56,476,298
|
|
G
|
Elfn1
|
extracellular leucine-rich repeat and fibronectin type III domain containing 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr12:14,660,049...14,725,709
Ensembl chr12:14,660,083...14,724,580
|
|
G
|
Elfn2
|
extracellular leucine-rich repeat and fibronectin type III domain containing 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:110,220,293...110,272,770
Ensembl chr 7:110,225,919...110,272,433
|
|
G
|
Emid1
|
EMI domain containing 1
|
located_in
|
ISO
|
(PMID:12221002)
|
RGD |
PMID:12221002 |
|
NCBI chr14:80,000,486...80,043,561
Ensembl chr14:80,000,486...80,043,620
|
|
G
|
Emilin1
|
elastin microfibril interfacer 1
|
located_in
|
ISO IEA
|
(PMID:14701737) GO_REF:0000107
|
RGD Ensembl |
PMID:14701737 |
GO_REF:0000107 |
NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698
|
|
G
|
Enam
|
enamelin
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:24603688)
|
GO_Central RGD |
PMID:24603688 |
GO_REF:0000033 |
NCBI chr14:19,556,729...19,581,433
Ensembl chr14:19,556,729...19,581,425
|
|
G
|
Epyc
|
epiphycan
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:19932218)
|
GO_Central Ensembl RGD |
PMID:19932218 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 7:32,436,620...32,474,326
Ensembl chr 7:32,436,620...32,474,135
|
|
G
|
Fbln1
|
fibulin 1
|
located_in
|
ISO IEA
|
(PMID:2269669) GO_REF:0000107
|
RGD Ensembl |
PMID:2269669 |
GO_REF:0000107 |
NCBI chr 7:116,310,582...116,390,075
Ensembl chr 7:116,310,582...116,390,075
|
|
G
|
Fbln7
|
fibulin 7
|
located_in
|
ISO
|
(PMID:29730503)
|
RGD |
PMID:29730503 |
|
NCBI chr 3:116,111,581...116,145,839
Ensembl chr 3:116,111,677...116,147,983
|
|
G
|
Fbn1
|
fibrillin 1
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:3536967) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:3536967 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
|
|
G
|
Fbn2
|
fibrillin 2
|
located_in
|
IEA
|
GO_REF:0000117
|
UniProt |
|
GO_REF:0000117 |
NCBI chr18:51,499,670...51,703,976
Ensembl chr18:51,499,737...51,703,976
|
|
G
|
Fcgbp
|
Fc gamma binding protein
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:19432394)
|
GO_Central Ensembl RGD |
PMID:19432394 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:83,374,979...83,413,082
Ensembl chr 1:83,372,127...83,413,083
|
|
G
|
Fcgbpl1
|
Fc fragment of IgG binding protein-like 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:83,424,788...83,462,802
Ensembl chr 1:83,424,788...83,462,799
|
|
G
|
Fgf1
|
fibroblast growth factor 1
|
located_in
|
ISO
|
(PMID:15381701)
|
RGD |
PMID:15381701 |
|
NCBI chr18:30,686,555...30,772,667
Ensembl chr18:30,686,581...30,772,357
|
|
G
|
Fn1
|
fibronectin 1
|
is_active_in located_in
|
ISO IEA
|
(PMID:26571399) GO_REF:0000107 (PMID:11511678), (PMID:15065125), (PMID:15728191), (PMID:18559979), (PMID:2209468), (PMID:22821713), (PMID:22984613), (PMID:9421166)
|
RGD Ensembl |
PMID:2209468 PMID:9421166 PMID:11511678 PMID:15065125 PMID:15728191 PMID:18559979 PMID:22821713 PMID:22984613 PMID:26571399 More...
|
GO_REF:0000107 |
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
|
|
G
|
Gfod2
|
Gfo/Idh/MocA-like oxidoreductase domain containing 2
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:18757743)
|
GO_Central Ensembl RGD |
PMID:18757743 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr19:33,599,689...33,647,060
Ensembl chr19:33,604,187...33,647,004
|
|
G
|
Glg1
|
golgi glycoprotein 1
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:20530870)
|
Ensembl RGD |
PMID:20530870 |
GO_REF:0000107 |
NCBI chr19:39,124,892...39,224,178
Ensembl chr19:39,124,641...39,224,178
|
|
G
|
Gp1ba
|
glycoprotein Ib platelet subunit alpha
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:55,831,901...55,856,729
Ensembl chr10:55,352,899...55,356,774
|
|
G
|
Gpc1
|
glypican 1
|
located_in
|
ISS ISO
|
GO_REF:0000024 (PMID:20100867)
|
UniProt RGD |
PMID:20100867 |
GO_REF:0000024 |
NCBI chr 9:93,396,234...93,424,047
Ensembl chr 9:93,396,234...93,424,047
|
|
G
|
Gpld1
|
glycosylphosphatidylinositol specific phospholipase D1
|
located_in is_active_in
|
ISS ISO IBA
|
GO_REF:0000024 (PMID:15946906) GO_REF:0000033
|
UniProt RGD GO_Central |
PMID:15946906 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939
|
|
G
|
Hapln1
|
hyaluronan and proteoglycan link protein 1
|
located_in
|
ISO IEA
|
(PMID:14620382) GO_REF:0000107
|
RGD Ensembl |
PMID:14620382 |
GO_REF:0000107 |
NCBI chr 2:20,631,640...20,696,388
Ensembl chr 2:20,631,640...20,693,777
|
|
G
|
Hapln2
|
hyaluronan and proteoglycan link protein 2
|
located_in
|
ISS ISO
|
GO_REF:0000024 (PMID:11817897), (PMID:20181608)
|
UniProt RGD |
PMID:11817897 PMID:20181608 |
GO_REF:0000024 |
NCBI chr 2:173,488,909...173,496,824
Ensembl chr 2:173,491,160...173,496,588
|
|
G
|
Hmcn1
|
hemicentin 1
|
located_in
|
IEA
|
GO_REF:0000117
|
UniProt |
|
GO_REF:0000117 |
NCBI chr13:62,615,461...63,084,524
Ensembl chr13:62,615,461...63,084,524
|
|
G
|
Hmcn2
|
hemicentin 2
|
located_in
|
IEA
|
GO_REF:0000117
|
UniProt |
|
GO_REF:0000117 |
NCBI chr 3:14,588,353...14,738,320
Ensembl chr 3:14,588,662...14,738,025
|
|
G
|
Hpse
|
heparanase
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
|
|
G
|
Hpse2
|
heparanase 2 (inactive)
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:20576607) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:20576607 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:241,582,904...242,284,348
Ensembl chr 1:241,583,187...242,246,118
|
|
G
|
Hsd17b12
|
hydroxysteroid (17-beta) dehydrogenase 12
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr 3:79,990,048...80,113,556
Ensembl chr 3:79,990,056...80,113,617
|
|
G
|
Hspg2
|
heparan sulfate proteoglycan 2
|
located_in
|
ISO
|
(PMID:10579729), (PMID:15381701), (PMID:16407285), (PMID:23217742)
|
RGD |
PMID:10579729 PMID:15381701 PMID:16407285 PMID:23217742 |
|
NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594
|
|
G
|
Igfals
|
insulin-like growth factor binding protein, acid labile subunit
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:13,897,468...13,903,920
Ensembl chr10:13,898,395...13,902,677
|
|
G
|
Ihh
|
Indian hedgehog signaling molecule
|
located_in
|
ISO IEA
|
(PMID:11476578) GO_REF:0000107
|
RGD Ensembl |
PMID:11476578 |
GO_REF:0000107 |
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
|
|
G
|
Itih1
|
inter-alpha trypsin inhibitor, heavy chain 1
|
located_in
|
ISO
|
(PMID:17675295)
|
RGD |
PMID:17675295 |
|
NCBI chr16:6,122,246...6,136,363
Ensembl chr16:6,122,248...6,136,363
|
|
G
|
Kazald1
|
Kazal-type serine peptidase inhibitor domain 1
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr 1:243,939,596...243,943,060
Ensembl chr 1:243,939,647...243,943,059
|
|
G
|
Lama1
|
laminin subunit alpha 1
|
located_in
|
ISO IEA
|
(PMID:11984530), (PMID:14697343), (PMID:15065125), (PMID:16554364), (PMID:1907584), (PMID:7589890) GO_REF:0000107
|
RGD Ensembl |
PMID:1907584 PMID:7589890 PMID:11984530 PMID:14697343 PMID:15065125 PMID:16554364 More...
|
GO_REF:0000107 |
NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
|
|
G
|
Lama5
|
laminin subunit alpha 5
|
located_in
|
ISO IEA
|
(PMID:16554364) GO_REF:0000107
|
RGD Ensembl |
PMID:16554364 |
GO_REF:0000107 |
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
|
|
G
|
Lamb1
|
laminin subunit beta 1
|
located_in
|
ISO IEA
|
(PMID:16554364) GO_REF:0000107
|
RGD Ensembl |
PMID:16554364 |
GO_REF:0000107 |
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
|
|
G
|
Lamc3
|
laminin subunit gamma 3
|
located_in
|
IEA
|
GO_REF:0000117
|
UniProt |
|
GO_REF:0000117 |
NCBI chr 3:15,165,220...15,226,697
Ensembl chr 3:15,165,220...15,226,697
|
|
G
|
Lgals3
|
galectin 3
|
located_in
|
ISO
|
(PMID:15800063)
|
RGD |
PMID:15800063 |
|
NCBI chr15:20,620,083...20,632,019
Ensembl chr15:20,607,692...20,632,025
|
|
G
|
Lingo1
|
leucine rich repeat and Ig domain containing 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:57,011,272...57,193,496
Ensembl chr 8:57,010,007...57,196,544
|
|
G
|
Lingo3
|
leucine rich repeat and Ig domain containing 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:8,869,025...8,878,431
Ensembl chr 7:8,869,025...8,878,431
|
|
G
|
Lingo4
|
leucine rich repeat and Ig domain containing 4
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:182,035,522...182,040,787
Ensembl chr 2:182,014,326...182,040,787
|
|
G
|
Lox
|
lysyl oxidase
|
located_in
|
IDA IEA ISO
|
PMID:16251195 GO_REF:0000107 (PMID:18835815), (PMID:25715398), (PMID:9382709)
|
Ensembl RGD |
PMID:9382709 PMID:18835815 PMID:25715398 PMID:16251195 |
GO_REF:0000107, RGD:8553592 |
NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477
|
|
G
|
Loxl1
|
lysyl oxidase-like 1
|
located_in
|
IDA ISO
|
PMID:16251195 (PMID:10022501)
|
RGD |
PMID:10022501 PMID:16251195 |
RGD:8553592 |
NCBI chr 8:58,691,763...58,716,365
Ensembl chr 8:58,692,593...58,716,356
|
|
G
|
Lrig1
|
leucine-rich repeats and immunoglobulin-like domains 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:127,130,899...127,230,956
Ensembl chr 4:127,130,898...127,231,513
|
|
G
|
Lrig2
|
leucine-rich repeats and immunoglobulin-like domains 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:191,947,322...192,012,996
Ensembl chr 2:191,949,819...192,012,579
|
|
G
|
Lrrc17
|
leucine rich repeat containing 17
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:13,501,428...13,531,845
Ensembl chr 4:13,501,436...13,531,845
|
|
G
|
Lrrc3b
|
leucine rich repeat containing 3B
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr15:9,973,580...10,050,891
Ensembl chr15:9,969,983...10,051,066
|
|
G
|
Lrrn1
|
leucine rich repeat neuronal 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:140,476,752...140,520,210
Ensembl chr 4:140,476,324...140,518,620
|
|
G
|
Lrrn2
|
leucine rich repeat neuronal 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr13:44,321,944...44,382,454
Ensembl chr13:44,321,364...44,382,482
|
|
G
|
Lrrn3
|
leucine rich repeat neuronal 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 6:58,489,060...58,520,322
Ensembl chr 6:58,489,010...58,520,330
|
|
G
|
Lrrtm1
|
leucine rich repeat transmembrane neuronal 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184
|
|
G
|
Lrrtm3
|
leucine rich repeat transmembrane neuronal 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr20:24,515,627...24,689,669
Ensembl chr20:24,515,627...24,689,669
|
|
G
|
Lrrtm4
|
leucine rich repeat transmembrane neuronal 4
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:112,545,874...113,338,713
Ensembl chr 4:112,545,917...113,335,865
|
|
G
|
Ltbp1
|
latent transforming growth factor beta binding protein 1
|
located_in
|
ISO IEA
|
(PMID:8617200) GO_REF:0000107 GO_REF:0000117 (PMID:9008713)
|
RGD Ensembl UniProt |
PMID:8617200 PMID:9008713 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349
|
|
G
|
Ltbp2
|
latent transforming growth factor beta binding protein 2
|
located_in
|
IEA
|
GO_REF:0000117
|
UniProt |
|
GO_REF:0000117 |
NCBI chr 6:104,429,947...104,530,498
Ensembl chr 6:104,429,947...104,526,208
|
|
G
|
Ltbp4
|
latent transforming growth factor beta binding protein 4
|
located_in
|
ISO IEA
|
(PMID:9660815) GO_REF:0000107 GO_REF:0000117 (PMID:12208849)
|
RGD Ensembl UniProt |
PMID:9660815 PMID:12208849 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 1:82,600,136...82,634,346
Ensembl chr 1:82,600,136...82,632,178
|
|
G
|
Lum
|
lumican
|
located_in
|
ISO IEA
|
(PMID:12128073) GO_REF:0000107
|
RGD Ensembl |
PMID:12128073 |
GO_REF:0000107 |
NCBI chr 7:32,358,990...32,365,794
Ensembl chr 7:32,358,614...32,365,793
|
|
G
|
Mamdc2
|
MAM domain containing 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr 1:220,863,959...221,016,493
Ensembl chr 1:220,863,976...221,016,354
|
|
G
|
Matn1
|
matrilin 1
|
located_in
|
ISO IEA
|
(PMID:11102754) GO_REF:0000107
|
RGD Ensembl |
PMID:11102754 |
GO_REF:0000107 |
NCBI chr 5:143,117,198...143,127,140
Ensembl chr 5:143,117,504...143,127,059
|
|
G
|
Matn2
|
matrilin 2
|
located_in
|
ISO IEA
|
(PMID:11102754) GO_REF:0000107
|
RGD Ensembl |
PMID:11102754 |
GO_REF:0000107 |
NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113
|
|
G
|
Matn3
|
matrilin 3
|
located_in
|
ISO IEA
|
(PMID:11102754) GO_REF:0000107
|
RGD Ensembl |
PMID:11102754 |
GO_REF:0000107 |
NCBI chr 6:31,748,517...31,768,564
Ensembl chr 6:31,748,474...31,768,101
|
|
G
|
Megf9
|
multiple EGF-like-domains 9
|
located_in
|
IEA
|
GO_REF:0000117
|
UniProt |
|
GO_REF:0000117 |
NCBI chr 5:83,993,565...84,105,622
Ensembl chr 5:83,993,565...84,105,622
|
|
G
|
Mepe
|
matrix extracellular phosphoglycoprotein
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:5,420,634...5,432,186
Ensembl chr14:5,420,635...5,432,183
|
|
G
|
Mfap5
|
microfibril associated protein 5
|
located_in
|
ISO
|
(PMID:17099216)
|
RGD |
PMID:17099216 |
|
NCBI chr 4:155,727,925...155,750,458
Ensembl chr 4:155,727,925...155,750,458
|
|
G
|
Mgp
|
matrix Gla protein
|
is_active_in located_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
|
GO_REF:0000002 GO_REF:0000033 |
NCBI chr 4:169,766,290...169,769,612
Ensembl chr 4:169,766,279...169,769,667
|
|
G
|
Mmp1
|
matrix metallopeptidase 1
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
|
|
G
|
Mmp10
|
matrix metallopeptidase 10
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 8:4,689,840...4,697,748
Ensembl chr 8:4,689,840...4,697,748
|
|
G
|
Mmp11
|
matrix metallopeptidase 11
|
located_in
|
IEA ISO
|
GO_REF:0000002 GO_REF:0000107 (PMID:18622425)
|
InterPro Ensembl RGD |
PMID:18622425 |
GO_REF:0000002 GO_REF:0000107 |
NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
|
|
G
|
Mmp12
|
matrix metallopeptidase 12
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 8:12,866,652...12,876,554
Ensembl chr 8:4,581,785...4,599,611
|
|
G
|
Mmp13
|
matrix metallopeptidase 13
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239
|
|
G
|
Mmp14
|
matrix metallopeptidase 14
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
|
|
G
|
Mmp15
|
matrix metallopeptidase 15
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr19:9,663,449...9,684,943
Ensembl chr19:9,663,449...9,684,943
|
|
G
|
Mmp16
|
matrix metallopeptidase 16
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 5:31,312,280...31,556,276
Ensembl chr 5:31,312,280...31,548,388
|
|
G
|
Mmp17
|
matrix metallopeptidase 17
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr12:27,074,398...27,099,317
Ensembl chr12:27,074,409...27,099,316
|
|
G
|
Mmp19
|
matrix metallopeptidase 19
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 7:1,221,229...1,229,555
Ensembl chr 7:1,221,343...1,229,555
|
|
G
|
Mmp1b
|
matrix metallopeptidase 1b (interstitial collagenase)
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 8:4,598,326...4,606,965
Ensembl chr 8:4,598,391...4,606,965
|
|
G
|
Mmp2
|
matrix metallopeptidase 2
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
|
|
G
|
Mmp20
|
matrix metallopeptidase 20
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 8:4,789,415...4,830,035
Ensembl chr 8:4,789,415...4,830,035
|
|
G
|
Mmp21
|
matrix metallopeptidase 21
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 1:188,480,186...188,485,855
Ensembl chr 1:188,480,186...188,485,855
|
|
G
|
Mmp23
|
matrix metallopeptidase 23
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 5:166,239,643...166,242,734
Ensembl chr 5:166,239,644...166,242,433
|
|
G
|
Mmp24
|
matrix metallopeptidase 24
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:144,279,096...144,323,572
Ensembl chr 3:144,279,096...144,323,572
|
|
G
|
Mmp25
|
matrix metallopeptidase 25
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr10:12,661,297...12,676,119
Ensembl chr10:12,661,208...12,675,871
|
|
G
|
Mmp27
|
matrix metallopeptidase 27
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 8:4,745,887...4,755,806
Ensembl chr 8:4,745,883...4,755,806
|
|
G
|
Mmp28
|
matrix metallopeptidase 28
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr10:68,241,138...68,264,866
Ensembl chr10:68,241,138...68,264,866
|
|
G
|
Mmp3
|
matrix metallopeptidase 3
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 8:4,640,397...4,653,963
Ensembl chr 8:4,640,416...4,653,961
|
|
G
|
Mmp7
|
matrix metallopeptidase 7
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 8:4,848,186...4,855,908
Ensembl chr 8:4,848,186...4,855,902
|
|
G
|
Mmp8
|
matrix metallopeptidase 8
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 8:4,724,009...4,733,864
Ensembl chr 8:4,724,029...4,733,520
|
|
G
|
Mmp9
|
matrix metallopeptidase 9
|
located_in
|
IEA
|
GO_REF:0000002
|
InterPro |
|
GO_REF:0000002 |
NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
|
|
G
|
Muc2
|
mucin 2, oligomeric mucus/gel-forming
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:11352827), (PMID:19411636)
|
GO_Central RGD |
PMID:11352827 PMID:19411636 |
GO_REF:0000033 |
NCBI chr 1:196,799,494...196,831,740
Ensembl chr 1:196,799,517...196,831,756
|
|
G
|
Muc5ac
|
mucin 5AC, oligomeric mucus/gel-forming
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:196,864,336...196,896,475
Ensembl chr 1:196,864,336...196,896,475
|
|
G
|
Muc5b
|
mucin 5B, oligomeric mucus/gel-forming
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:196,916,861...196,948,830
Ensembl chr 1:196,916,825...196,949,250
|
|
G
|
Muc6
|
mucin 6, oligomeric mucus/gel-forming
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:196,726,678...196,764,842
Ensembl chr 1:196,726,807...196,764,842
|
|
G
|
Nav2
|
neuron navigator 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr 1:98,957,629...99,322,339
Ensembl chr 1:98,663,759...99,322,337
|
|
G
|
Ncan
|
neurocan
|
located_in
|
IEA
|
GO_REF:0000117
|
UniProt |
|
GO_REF:0000117 |
NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436
|
|
G
|
Ndnf
|
neuron-derived neurotrophic factor
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr 4:94,944,392...94,981,871
Ensembl chr 4:94,944,360...94,981,873
|
|
G
|
Nepn
|
nephrocan
|
located_in
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr20:31,786,607...31,799,458
Ensembl chr20:31,783,526...31,799,446
|
|
G
|
Nid1
|
nidogen 1
|
located_in
|
ISO IEA
|
(PMID:16618944) GO_REF:0000107
|
RGD Ensembl |
PMID:16618944 |
GO_REF:0000107 |
NCBI chr17:86,085,133...86,158,272
Ensembl chr17:86,085,077...86,158,267
|
|
G
|
Nid2
|
nidogen 2
|
located_in
|
ISO IEA
|
(PMID:16618944) GO_REF:0000107
|
RGD Ensembl |
PMID:16618944 |
GO_REF:0000107 |
NCBI chr15:4,458,082...4,513,808
Ensembl chr15:4,458,084...4,513,843
|
|
G
|
Npnt
|
nephronectin
|
located_in
|
ISO IEA
|
UniProtKB:Q8BPT3 (PMID:11470831), (PMID:11546798) GO_REF:0000107
|
RGD Ensembl |
PMID:11470831 PMID:11546798 |
GO_REF:0000107 |
NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
|
|
G
|
Oc90
|
otoconin 90
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:9892667)
|
GO_Central Ensembl RGD |
PMID:9892667 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 7:97,635,890...97,669,303
Ensembl chr 7:97,635,890...97,669,416
|
|
G
|
Ogn
|
osteoglycin
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr17:15,032,069...15,052,626
Ensembl chr17:15,032,069...15,052,739
|
|
G
|
Olfml2a
|
olfactomedin-like 2A
|
located_in
|
ISO IEA
|
(PMID:15836428), (PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:15836428 PMID:18757743 |
GO_REF:0000107 |
NCBI chr 3:22,688,590...22,717,917
Ensembl chr 3:22,688,598...22,717,909
|
|
G
|
Olfml2b
|
olfactomedin-like 2B
|
located_in
|
ISO IEA
|
(PMID:15836428), (PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:15836428 PMID:18757743 |
GO_REF:0000107 |
NCBI chr13:82,869,414...82,906,607
Ensembl chr13:82,869,433...82,906,607
|
|
G
|
Omd
|
osteomodulin
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:14673660)
|
Ensembl RGD |
PMID:14673660 |
GO_REF:0000107 |
NCBI chr17:15,060,217...15,068,441
Ensembl chr17:15,060,217...15,068,441
|
|
G
|
Optc
|
opticin
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:18164633) GO_REF:0000107 (PMID:22159013) GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:18164633 PMID:22159013 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr13:45,353,954...45,368,254
Ensembl chr13:45,355,148...45,365,237
|
|
G
|
Otog
|
otogelin
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:9405633)
|
GO_Central Ensembl RGD |
PMID:9405633 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:96,746,336...96,815,416
Ensembl chr 1:96,746,336...96,815,415
|
|
G
|
Otogl
|
otogelin-like
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:43,065,800...43,211,400
Ensembl chr 7:43,067,644...43,223,592
|
|
G
|
Phospho1
|
phosphoethanolamine/phosphocholine phosphatase 1
|
located_in
|
ISO
|
(PMID:19874193)
|
RGD |
PMID:19874193 |
|
NCBI chr10:80,762,062...80,769,596
Ensembl chr10:80,760,792...80,770,342
|
|
G
|
Postn
|
periostin
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:10404027), (PMID:24563484)
|
GO_Central Ensembl RGD |
PMID:10404027 PMID:24563484 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
|
|
G
|
Prss34
|
protease, serine, 34
|
located_in
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr10:14,315,913...14,317,712
Ensembl chr10:14,315,955...14,317,712
|
|
G
|
Ptprz1
|
protein tyrosine phosphatase, receptor type Z1
|
located_in
|
ISO IEA
|
(PMID:19141078) GO_REF:0000107
|
RGD Ensembl |
PMID:19141078 |
GO_REF:0000107 |
NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
|
|
G
|
Ptx3
|
pentraxin 3
|
located_in
|
ISO
|
(PMID:17675295)
|
RGD |
PMID:17675295 |
|
NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
|
|
G
|
Pxdn
|
peroxidasin
|
located_in
|
ISO IEA
|
(PMID:26178375) GO_REF:0000107
|
RGD Ensembl |
PMID:26178375 |
GO_REF:0000107 |
NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
|
|
G
|
Rarres2
|
retinoic acid receptor responder 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:77,522,549...77,525,733
Ensembl chr 4:77,522,535...77,525,556
|
|
G
|
Rell2
|
RELT-like 2
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr18:29,789,996...29,793,986
Ensembl chr18:29,790,415...29,793,986
|
|
G
|
Reln
|
reelin
|
located_in
|
ISO
|
(PMID:22665518)
|
RGD |
PMID:22665518 |
|
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
|
|
G
|
Rtn4rl2
|
reticulon 4 receptor-like 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:69,954,557...69,971,108
Ensembl chr 3:69,955,169...69,971,488
|
|
G
|
Serac1
|
serine active site containing 1
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr 1:46,620,741...46,656,801
Ensembl chr 1:46,620,498...46,656,727
|
|
G
|
Shh
|
sonic hedgehog signaling molecule
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:11476578)
|
Ensembl RGD |
PMID:11476578 |
GO_REF:0000107 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
|
|
G
|
Smoc2
|
SPARC related modular calcium binding 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693
|
|
G
|
Sned1
|
sushi, nidogen and EGF-like domains 1
|
located_in
|
IEA ISO
|
GO_REF:0000117 (PMID:33724335)
|
UniProt RGD |
PMID:33724335 |
GO_REF:0000117 |
NCBI chr 9:93,774,087...93,834,003
Ensembl chr 9:93,774,119...93,830,694
|
|
G
|
Sparc
|
secreted protein acidic and cysteine rich
|
located_in
|
ISO
|
(PMID:8906420)
|
RGD |
PMID:8906420 |
|
NCBI chr10:39,516,394...39,538,252
Ensembl chr10:39,516,406...39,538,396
|
|
G
|
Spock3
|
SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3
|
located_in
|
ISO
|
(PMID:11751414)
|
RGD |
PMID:11751414 |
|
NCBI chr16:26,382,895...26,815,943
Ensembl chr16:26,383,383...26,815,205
|
|
G
|
Spon1
|
spondin 1
|
is_active_in located_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000104
|
GO_Central UniProt |
|
GO_REF:0000033 GO_REF:0000104 |
NCBI chr 1:167,929,049...168,228,239
Ensembl chr 1:167,928,972...168,228,226
|
|
G
|
Spon2
|
spondin 2
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:14691481)
|
GO_Central Ensembl RGD |
PMID:14691481 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr14:77,505,695...77,518,001
Ensembl chr14:77,511,901...77,517,996
|
|
G
|
Ssc5d
|
scavenger receptor cysteine rich family member with 5 domains
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:68,891,942...68,910,462
Ensembl chr 1:68,891,949...68,909,743
|
|
G
|
Sspo
|
SCO-spondin
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:77,394,915...77,450,526
Ensembl chr 4:77,397,059...77,450,412
|
|
G
|
Tecta
|
tectorin alpha
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:9079715)
|
GO_Central Ensembl RGD |
PMID:9079715 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 8:42,707,962...42,779,726
Ensembl chr 8:42,707,962...42,779,707
|
|
G
|
Tectb
|
tectorin beta
|
located_in
|
ISO IEA
|
(PMID:9079715) GO_REF:0000107
|
RGD Ensembl |
PMID:9079715 |
GO_REF:0000107 |
NCBI chr 1:254,221,621...254,236,669
Ensembl chr 1:254,221,621...254,236,669
|
|
G
|
Tfip11
|
tuftelin interacting protein 11
|
located_in
|
ISO IEA
|
(PMID:10806191) GO_REF:0000107
|
RGD Ensembl |
PMID:10806191 |
GO_REF:0000107 |
NCBI chr12:44,299,619...44,311,851
Ensembl chr12:44,299,622...44,311,855
|
|
G
|
Tgfb1
|
transforming growth factor, beta 1
|
located_in
|
ISO IEA
|
(PMID:12208849), (PMID:18835815), (PMID:2209468), (PMID:9008713) GO_REF:0000107
|
RGD Ensembl |
PMID:2209468 PMID:9008713 PMID:12208849 PMID:18835815 |
GO_REF:0000107 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
|
|
G
|
Tgfb2
|
transforming growth factor, beta 2
|
located_in
|
ISS
|
GO_REF:0000024
|
UniProt |
|
GO_REF:0000024 |
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
|
|
G
|
Tgfb3
|
transforming growth factor, beta 3
|
located_in
|
ISS ISO
|
GO_REF:0000024 (PMID:10521784)
|
AgBase RGD |
PMID:10521784 |
GO_REF:0000024 |
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
|
|
G
|
Tgfbi
|
transforming growth factor, beta induced
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:12963107)
|
GO_Central Ensembl RGD |
PMID:12963107 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr17:7,955,603...7,984,903
Ensembl chr17:7,955,603...7,985,240
|
|
G
|
Tgm2
|
transglutaminase 2
|
located_in
|
ISO
|
(PMID:12506096), (PMID:28198360)
|
RGD |
PMID:12506096 PMID:28198360 |
|
NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981
|
|
G
|
Thbs1
|
thrombospondin 1
|
located_in
|
ISO IEA
|
(PMID:18285447), (PMID:6341993) GO_REF:0000107
|
RGD Ensembl |
PMID:6341993 PMID:18285447 |
GO_REF:0000107 |
NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
|
|
G
|
Thbs2
|
thrombospondin 2
|
located_in
|
ISO IEA
|
(PMID:10669089) GO_REF:0000107
|
RGD Ensembl |
PMID:10669089 |
GO_REF:0000107 |
NCBI chr 1:55,670,394...55,699,789
Ensembl chr 1:55,670,394...55,699,789
|
|
G
|
Thsd4
|
thrombospondin type 1 domain containing 4
|
located_in
|
ISO IEA
|
(PMID:19940141) GO_REF:0000107
|
RGD Ensembl |
PMID:19940141 |
GO_REF:0000107 |
NCBI chr 8:60,384,636...60,984,419
Ensembl chr 8:60,386,875...61,024,995
|
|
G
|
Timp1
|
TIMP metallopeptidase inhibitor 1
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:12950084)
|
GO_Central Ensembl RGD |
PMID:12950084 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr X:1,212,969...1,217,714
Ensembl chr X:1,212,972...1,217,664
|
|
G
|
Timp2
|
TIMP metallopeptidase inhibitor 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:103,541,199...103,590,611
Ensembl chr10:103,531,505...103,590,611
|
|
G
|
Timp3
|
TIMP metallopeptidase inhibitor 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:17,520,827...17,571,850
Ensembl chr 7:17,521,919...17,571,839
|
|
G
|
Timp4
|
TIMP metallopeptidase inhibitor 4
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:148,306,021...148,312,558
Ensembl chr 4:148,304,490...148,312,558
|
|
G
|
Tnfrsf11b
|
TNF receptor superfamily member 11B
|
located_in
|
ISO IEA
|
(PMID:9108485) GO_REF:0000107
|
RGD Ensembl |
PMID:9108485 |
GO_REF:0000107 |
NCBI chr 7:85,566,520...85,594,526
Ensembl chr 7:85,566,520...85,594,538
|
|
G
|
Tnn
|
tenascin N
|
located_in
|
ISO IEA
|
(PMID:14709716) GO_REF:0000107
|
RGD Ensembl |
PMID:14709716 |
GO_REF:0000107 |
NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156
|
|
G
|
Tnr
|
tenascin R
|
located_in
|
ISO IEA
|
(PMID:19141078), (PMID:7530142) GO_REF:0000107
|
RGD Ensembl |
PMID:7530142 PMID:19141078 |
GO_REF:0000107 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
|
|
G
|
Tnxb
|
tenascin XB
|
located_in
|
ISO IEA
|
(PMID:24563484), (PMID:7512972) GO_REF:0000107
|
RGD Ensembl |
PMID:7512972 PMID:24563484 |
GO_REF:0000107 |
|
|
G
|
Tril
|
TLR4 interactor with leucine-rich repeats
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:82,922,327...82,927,172
Ensembl chr 4:82,922,328...82,927,172
|
|
G
|
Tsku
|
tsukushi, small leucine rich proteoglycan
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
|
|
G
|
Ttc27
|
tetratricopeptide repeat domain 27
|
located_in
|
IEA
|
GO_REF:0000107 GO_REF:0000117
|
Ensembl UniProt |
|
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 6:20,558,756...20,702,126
Ensembl chr 6:20,558,756...20,702,115
|
|
G
|
Ucma
|
upper zone of growth plate and cartilage matrix associated
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:18156182)
|
GO_Central RGD |
PMID:18156182 |
GO_REF:0000033 |
NCBI chr17:73,293,977...73,303,709
Ensembl chr17:73,293,978...73,303,611
|
|
G
|
Vasn
|
vasorin
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:10,917,750...10,928,259
Ensembl chr10:10,917,605...10,928,357
|
|
G
|
Vcan
|
versican
|
located_in
|
ISO IEA
|
(PMID:14620382) GO_REF:0000117
|
RGD UniProt |
PMID:14620382 |
GO_REF:0000117 |
NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637
|
|
G
|
Vit
|
vitrin
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr 6:16,445,966...16,565,644
Ensembl chr 6:16,445,955...16,565,665
|
|
G
|
Vtn
|
vitronectin
|
located_in
|
ISO IEA
|
(PMID:15728191) GO_REF:0000107
|
RGD Ensembl |
PMID:15728191 |
GO_REF:0000107 |
NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
|
|
G
|
Vwa1
|
von Willebrand factor A domain containing 1
|
located_in is_active_in
|
ISO IEA
|
(PMID:16407285), (PMID:18757743) GO_REF:0000107 (PMID:23300779)
|
RGD Ensembl |
PMID:16407285 PMID:18757743 PMID:23300779 |
GO_REF:0000107 |
NCBI chr 5:166,377,451...166,382,784
Ensembl chr 5:166,377,455...166,382,637
|
|
G
|
Vwc2
|
von Willebrand factor C domain containing 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr14:85,683,670...85,825,068
Ensembl chr14:85,684,414...85,818,524
|
|
G
|
Wnt11
|
Wnt family member 11
|
located_in
|
ISO IEA
|
(PMID:8700530) GO_REF:0000107
|
RGD Ensembl |
PMID:8700530 |
GO_REF:0000107 |
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
|
|
G
|
Wnt3
|
Wnt family member 3
|
located_in
|
ISO
|
(PMID:8167409)
|
RGD |
PMID:8167409 |
|
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
|
|
G
|
Wnt4
|
Wnt family member 4
|
located_in
|
ISO IEA
|
(PMID:8167409) GO_REF:0000107
|
RGD Ensembl |
PMID:8167409 |
GO_REF:0000107 |
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
|
|
G
|
Wnt5a
|
Wnt family member 5A
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:8167409)
|
Ensembl RGD |
PMID:8167409 |
GO_REF:0000107 |
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
|
|
G
|
Wnt5b
|
Wnt family member 5B
|
located_in
|
ISO
|
(PMID:8167409)
|
RGD |
PMID:8167409 |
|
NCBI chr 4:152,609,566...152,733,790
Ensembl chr 4:152,609,569...152,733,407
|
|
G
|
Wnt6
|
Wnt family member 6
|
located_in
|
ISO IEA
|
(PMID:8167409) GO_REF:0000107
|
RGD Ensembl |
PMID:8167409 |
GO_REF:0000107 |
NCBI chr 9:76,329,882...76,343,523
Ensembl chr 9:76,329,882...76,343,523
|
|
G
|
Wnt7a
|
Wnt family member 7A
|
located_in
|
ISO IEA
|
(PMID:8167409) GO_REF:0000107
|
RGD Ensembl |
PMID:8167409 |
GO_REF:0000107 |
NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981
|
|
G
|
Zan
|
zonadhesin
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr12:19,215,018...19,322,789
Ensembl chr12:19,215,102...19,271,240
|
|
G
|
Zp3
|
zona pellucida glycoprotein 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
AABR07018244.2
|
|
located_in
|
IEA
|
GO_REF:0000044 GO_REF:0000043
|
UniProt |
|
GO_REF:0000043 GO_REF:0000044 |
Ensembl chr15:39,788,233...39,788,853
|
|
G
|
Acan
|
aggrecan
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:16061471)
|
Ensembl RGD |
PMID:16061471 |
GO_REF:0000107 |
NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627
|
|
G
|
Ache
|
acetylcholinesterase
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:7885444)
|
Ensembl RGD |
PMID:7885444 |
GO_REF:0000107 |
NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651
|
|
G
|
Acta2
|
actin alpha 2, smooth muscle
|
|
IDA
|
MMO:0000538
|
RGD |
PMID:30476341 |
RGD:151893502 |
NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554
|
|
G
|
Adamts1
|
ADAM metallopeptidase with thrombospondin type 1 motif, 1
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:16061471)
|
Ensembl RGD |
PMID:16061471 |
GO_REF:0000107 |
NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103
|
|
G
|
Agrn
|
agrin
|
located_in
|
IDA IEA ISO ISS
|
GO_REF:0000107 (PMID:18757743), (PMID:7670489) GO_REF:0000117 GO_REF:0000024 (PMID:9405491)
|
Ensembl RGD UniProt |
PMID:7670489 PMID:9405491 PMID:18757743 PMID:15711988 |
GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 (All species) (All species), RGD:1578369 |
NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
|
|
G
|
Alb
|
albumin
|
|
IDA
|
|
RGD |
PMID:1723977 |
RGD:1625719 |
NCBI chr14:17,607,397...17,622,814
Ensembl chr14:17,607,381...17,622,836
|
|
G
|
Amelx
|
amelogenin, X-linked
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr X:25,076,362...25,087,660
Ensembl chr X:25,076,362...25,087,660
|
|
G
|
Amtn
|
amelotin
|
located_in is_active_in
|
IDA IEA ISO IBA
|
PMID:16787391 GO_REF:0000107 (PMID:16787391) GO_REF:0000033
|
Ensembl RGD GO_Central |
PMID:16787391 PMID:16787391 |
GO_REF:0000033 GO_REF:0000107, RGD:2304068 |
NCBI chr14:19,648,624...19,661,181
Ensembl chr14:19,648,625...19,661,181
|
|
G
|
Ang
|
angiogenin
|
located_in
|
ISO
|
(PMID:15166501)
|
RGD |
PMID:15166501 |
|
NCBI chr15:24,312,711...24,323,361
|
|
G
|
Anxa2
|
annexin A2
|
located_in
|
IEA
|
GO_REF:0000044 GO_REF:0000043
|
UniProt |
|
GO_REF:0000043 GO_REF:0000044 |
NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
|
|
G
|
Cask
|
calcium/calmodulin dependent serine protein kinase
|
part_of located_in
|
ISO IEA
|
(PMID:18664494) GO_REF:0000107
|
RGD Ensembl |
PMID:18664494 |
GO_REF:0000107 |
NCBI chr X:8,899,500...9,243,014
Ensembl chr X:8,899,833...9,238,694
|
|
G
|
Ccdc80
|
coiled-coil domain containing 80
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:18757743)
|
GO_Central Ensembl RGD |
PMID:18757743 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr11:55,685,165...55,718,827
Ensembl chr11:55,685,872...55,719,137
|
|
G
|
Cd151
|
CD151 molecule (Raph blood group)
|
part_of
|
ISO IEA
|
(PMID:23302890) GO_REF:0000107
|
RGD Ensembl |
PMID:23302890 |
GO_REF:0000107 |
NCBI chr 1:205,994,300...205,998,307
Ensembl chr 1:196,565,181...196,568,753
|
|
G
|
Cntnap5b
|
contactin associated protein family member 5B
|
located_in
|
IEA
|
GO_REF:0000117
|
UniProt |
|
GO_REF:0000117 |
NCBI chr13:17,863,367...18,766,983
Ensembl chr13:18,093,420...18,761,014
|
|
G
|
Cntnap5bl1
|
contactin associated protein family member 5B like 1
|
located_in
|
IEA
|
GO_REF:0000117
|
UniProt |
|
GO_REF:0000117 |
NCBI chr13:11,853,761...12,864,307
Ensembl chr13:11,864,166...12,864,242
|
|
G
|
Cntnap5c
|
contactin associated protein-like 5C
|
located_in
|
IEA
|
GO_REF:0000117
|
UniProt |
|
GO_REF:0000117 |
NCBI chr13:3,513,615...4,546,285
Ensembl chr13:3,514,198...4,542,745
|
|
G
|
Col13a1
|
collagen type XIII alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032
|
|
G
|
Col15a1
|
collagen type XV alpha 1 chain
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:18757743) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:18757743 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 5:61,501,963...61,607,591
Ensembl chr 5:61,501,963...61,607,591
|
|
G
|
Col18a1
|
collagen type XVIII alpha 1 chain
|
located_in
|
ISO
|
(PMID:12588956), (PMID:15254016), (PMID:18757743), (PMID:19651211), (PMID:7568013)
|
RGD |
PMID:7568013 PMID:12588956 PMID:15254016 PMID:18757743 PMID:19651211 |
|
NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
|
|
G
|
Col22a1
|
collagen type XXII alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:103,730,939...103,968,452
Ensembl chr 7:103,731,037...103,968,462
|
|
G
|
Col24a1
|
collagen type XXIV alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:234,212,256...234,469,445
Ensembl chr 2:234,212,324...234,469,441
|
|
G
|
Col28a1
|
collagen type XXVIII alpha 1 chain
|
located_in
|
ISO IEA
|
(PMID:16330543), (PMID:20830809) GO_REF:0000107
|
RGD Ensembl |
PMID:16330543 PMID:20830809 |
GO_REF:0000107 |
NCBI chr 4:36,069,980...36,223,128
Ensembl chr 4:36,069,970...36,223,220
|
|
G
|
Col2a1
|
collagen type II alpha 1 chain
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:11273670)
|
Ensembl RGD |
PMID:11273670 |
GO_REF:0000107 |
NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546
|
|
G
|
Col4a1
|
collagen type IV alpha 1 chain
|
located_in
|
ISO IEA
|
(PMID:11511678), (PMID:11732842), (PMID:15895400), (PMID:16041630), (PMID:18757743) GO_REF:0000107 GO_REF:0000043 GO_REF:0000044
|
RGD Ensembl UniProt |
PMID:11511678 PMID:11732842 PMID:15895400 PMID:16041630 PMID:18757743 |
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 |
NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
|
|
G
|
Col4a2
|
collagen type IV alpha 2 chain
|
located_in
|
ISO IEA
|
GO_REF:0000044 GO_REF:0000107 GO_REF:0000043 (PMID:11732842), (PMID:16041630), (PMID:18757743)
|
RGD UniProt Ensembl |
PMID:11732842 PMID:16041630 PMID:18757743 |
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 (All species) (All species) |
NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839
|
|
G
|
Col4a3
|
collagen type IV alpha 3 chain
|
located_in
|
ISO IEA
|
(PMID:10766752) GO_REF:0000044 GO_REF:0000043 (PMID:11732842), (PMID:16041630), (PMID:18757743)
|
RGD UniProt |
PMID:10766752 PMID:11732842 PMID:16041630 PMID:18757743 |
GO_REF:0000043 GO_REF:0000044 |
NCBI chr 9:83,875,849...84,004,955
Ensembl chr 9:83,875,561...84,001,895
|
|
G
|
Col4a4
|
collagen type IV alpha 4 chain
|
located_in
|
ISO IEA
|
(PMID:2211832) GO_REF:0000107 GO_REF:0000044 GO_REF:0000043 (PMID:10534397), (PMID:11732842), (PMID:19275937), (PMID:9264260)
|
RGD Ensembl UniProt |
PMID:2211832 PMID:9264260 PMID:10534397 PMID:11732842 PMID:19275937 |
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 |
NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876
|
|
G
|
Col4a5
|
collagen type IV alpha 5 chain
|
located_in
|
ISO IEA
|
(PMID:10534397), (PMID:11732842), (PMID:18757743), (PMID:19275937), (PMID:7885444), (PMID:9264260) GO_REF:0000043 GO_REF:0000044
|
RGD UniProt |
PMID:7885444 PMID:9264260 PMID:10534397 PMID:11732842 PMID:18757743 PMID:19275937 More...
|
GO_REF:0000043 GO_REF:0000044 |
NCBI chr X:105,118,762...105,322,699
Ensembl chr X:105,118,820...105,322,692
|
|
G
|
Col4a6
|
collagen type IV alpha 6 chain
|
located_in
|
ISO IEA
|
(PMID:10534397), (PMID:11732842), (PMID:18757743), (PMID:19275937) GO_REF:0000043 GO_REF:0000044
|
RGD UniProt |
PMID:10534397 PMID:11732842 PMID:18757743 PMID:19275937 |
GO_REF:0000043 GO_REF:0000044 |
NCBI chr X:104,766,463...105,117,499
Ensembl chr X:104,766,957...105,117,500
|
|
G
|
Col5a1
|
collagen type V alpha 1 chain
|
located_in
|
ISO
|
(PMID:14676276)
|
RGD |
PMID:14676276 |
|
NCBI chr 3:31,606,475...31,755,097
Ensembl chr 3:11,208,512...11,354,588
|
|
G
|
Col6a1
|
collagen type VI alpha 1 chain
|
is_active_in
|
ISO IEA IBA
|
(PMID:31837950) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:31837950 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597
|
|
G
|
Col6a3
|
collagen type VI alpha 3 chain
|
located_in
|
IEA
|
GO_REF:0000044 GO_REF:0000043
|
UniProt |
|
GO_REF:0000043 GO_REF:0000044 |
NCBI chr 9:91,361,578...91,439,434
Ensembl chr 9:91,361,583...91,439,471
|
|
G
|
Col7a1
|
collagen type VII alpha 1 chain
|
located_in is_active_in
|
ISO IBA
|
(PMID:18757743), (PMID:19651211) GO_REF:0000033
|
RGD GO_Central |
PMID:18757743 PMID:19651211 |
GO_REF:0000033 |
NCBI chr 8:109,604,877...109,637,249
Ensembl chr 8:109,604,861...109,637,252
|
|
G
|
Col9a3
|
collagen type IX alpha 3 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:167,711,776...167,734,468
Ensembl chr 3:167,711,840...167,734,465
|
|
G
|
Colq
|
collagen like tail subunit of asymmetric acetylcholinesterase
|
|
TAS
|
|
RGD |
PMID:12684510 |
RGD:728369 |
NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107
|
|
G
|
Cst3
|
cystatin C
|
|
IDA
|
|
RGD |
PMID:15872057 |
RGD:2306505 |
NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822
|
|
G
|
Dag1
|
dystroglycan 1
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:19348877) GO_REF:0000107 (PMID:11798066), (PMID:23217742), (PMID:9524190) GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:9524190 PMID:11798066 PMID:19348877 PMID:23217742 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
|
|
G
|
Dlg1
|
discs large MAGUK scaffold protein 1
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:24191021)
|
Ensembl RGD |
PMID:24191021 |
GO_REF:0000107 |
NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
|
|
G
|
Efemp1
|
EGF containing fibulin extracellular matrix protein 1
|
|
IDA
|
|
RGD |
PMID:18803302 |
RGD:10401659 |
NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018
|
|
G
|
Efemp2
|
EGF containing fibulin extracellular matrix protein 2
|
located_in
|
ISO IEA
|
(PMID:17324935) GO_REF:0000107
|
RGD Ensembl |
PMID:17324935 |
GO_REF:0000107 |
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
|
|
G
|
Efna5
|
ephrin A5
|
located_in
|
ISO
|
(PMID:23242526)
|
RGD |
PMID:23242526 |
|
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
|
|
G
|
Egfl6
|
EGF-like-domain, multiple 6
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr X:27,884,087...27,942,044
Ensembl chr X:27,884,125...27,942,044
|
|
G
|
Egflam
|
EGF-like, fibronectin type III and laminin G domains
|
located_in
|
IEA ISO
|
GO_REF:0000117 GO_REF:0000107 (PMID:18757743)
|
UniProt Ensembl RGD |
PMID:18757743 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 2:56,301,945...56,476,665
Ensembl chr 2:56,302,566...56,476,298
|
|
G
|
Entpd1
|
ectonucleoside triphosphate diphosphohydrolase 1
|
located_in
|
ISO IEA
|
(PMID:11929769) GO_REF:0000107
|
RGD Ensembl |
PMID:11929769 |
GO_REF:0000107 |
NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
|
|
G
|
Entpd2
|
ectonucleoside triphosphate diphosphohydrolase 2
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:11929769)
|
Ensembl RGD |
PMID:11929769 |
GO_REF:0000107 |
NCBI chr 3:8,213,575...8,219,094
Ensembl chr 3:8,213,663...8,226,866
|
|
G
|
Fbln1
|
fibulin 1
|
located_in
|
ISO IEA
|
(PMID:16061471) GO_REF:0000107
|
RGD Ensembl |
PMID:16061471 |
GO_REF:0000107 |
NCBI chr 7:116,310,582...116,390,075
Ensembl chr 7:116,310,582...116,390,075
|
|
G
|
Fbn1
|
fibrillin 1
|
located_in
|
ISO IEA
|
(PMID:3536967) GO_REF:0000107
|
RGD Ensembl |
PMID:3536967 |
GO_REF:0000107 |
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
|
|
G
|
Fgf9
|
fibroblast growth factor 9
|
|
IDA
|
ovarian granulosa cells and follicles; seminiferous tubules
|
RGD |
PMID:17494997 |
RGD:2289861 |
NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
|
|
G
|
Fn1
|
fibronectin 1
|
located_in
|
IDA ISO IEA
|
(PMID:11511678), (PMID:24191021), (PMID:8984825) GO_REF:0000107
|
RGD Ensembl |
PMID:8984825 PMID:11511678 PMID:24191021 PMID:14656002 |
GO_REF:0000107, RGD:1578551 |
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
|
|
G
|
Fras1
|
Fraser extracellular matrix complex subunit 1
|
located_in
|
ISO IEA
|
(PMID:15345741), (PMID:15623520), (PMID:16880404), (PMID:17251066), (PMID:17596926), (PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:15345741 PMID:15623520 PMID:16880404 PMID:17251066 PMID:17596926 PMID:18757743 More...
|
GO_REF:0000107 |
NCBI chr14:12,791,407...13,200,862
Ensembl chr14:12,793,599...13,200,726
|
|
G
|
Frem1
|
Fras1 related extracellular matrix 1
|
located_in
|
ISO IEA
|
(PMID:16880404), (PMID:17251066), (PMID:17596926), (PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:16880404 PMID:17251066 PMID:17596926 PMID:18757743 |
GO_REF:0000107 |
NCBI chr 5:97,321,266...97,469,523
Ensembl chr 5:97,322,538...97,469,543
|
|
G
|
Frem2
|
FRAS1 related extracellular matrix 2
|
located_in
|
ISO IEA
|
(PMID:16880404), (PMID:17251066), (PMID:17596926) GO_REF:0000107
|
RGD Ensembl |
PMID:16880404 PMID:17251066 PMID:17596926 |
GO_REF:0000107 |
NCBI chr 2:137,602,784...137,740,785
Ensembl chr 2:137,602,784...137,740,785
|
|
G
|
Frem3
|
FRAS1 related extracellular matrix 3
|
located_in
|
ISO
|
(PMID:17251066), (PMID:17462874), (PMID:17596926)
|
RGD |
PMID:17251066 PMID:17462874 PMID:17596926 |
|
NCBI chr19:27,308,469...27,366,771
Ensembl chr19:27,308,469...27,366,771
|
|
G
|
Gsto1
|
glutathione S-transferase omega 1
|
|
IDA
|
|
RGD |
PMID:11311527 |
RGD:5490519 |
NCBI chr 1:246,721,089...246,731,228
Ensembl chr 1:246,721,221...246,731,468
|
|
G
|
Hmcn1
|
hemicentin 1
|
located_in
|
ISO IEA
|
(PMID:17015624), (PMID:29488390), (PMID:32035013), (PMID:34504132) GO_REF:0000107
|
RGD Ensembl |
PMID:17015624 PMID:29488390 PMID:32035013 PMID:34504132 |
GO_REF:0000107 |
NCBI chr13:62,615,461...63,084,524
Ensembl chr13:62,615,461...63,084,524
|
|
G
|
Hmcn2
|
hemicentin 2
|
located_in
|
ISO IEA
|
(PMID:17015624) GO_REF:0000107
|
RGD Ensembl |
PMID:17015624 |
GO_REF:0000107 |
NCBI chr 3:14,588,353...14,738,320
Ensembl chr 3:14,588,662...14,738,025
|
|
G
|
Hspg2
|
heparan sulfate proteoglycan 2
|
located_in
|
TAS IEA ISO
|
PMID:8621634 GO_REF:0000044 GO_REF:0000043 GO_REF:0000117 (PMID:10352025), (PMID:10579729), (PMID:11787818), (PMID:11802174), (PMID:12588956), (PMID:15381701), (PMID:15895400), (PMID:15928325), (PMID:18757743), (PMID:7670489)
|
UniProt RGD |
PMID:7670489 PMID:10352025 PMID:10579729 PMID:11787818 PMID:11802174 PMID:12588956 PMID:15381701 PMID:15895400 PMID:15928325 PMID:18757743 PMID:8621634 More...
|
GO_REF:0000043 GO_REF:0000044 GO_REF:0000117 (All species) (All species), RGD:12793010 |
NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594
|
|
G
|
Itga6
|
integrin subunit alpha 6
|
located_in
|
ISO
|
(PMID:9524190)
|
RGD |
PMID:9524190 |
|
NCBI chr 3:56,604,512...56,689,428
Ensembl chr 3:56,617,268...56,689,428
|
|
G
|
Itgb1
|
integrin subunit beta 1
|
|
IDA
|
|
RGD |
PMID:9202984 PMID:18596883 |
RGD:1581320, RGD:2325689 |
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
|
|
G
|
Itgb4
|
integrin subunit beta 4
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:17011173)
|
Ensembl RGD |
PMID:17011173 |
GO_REF:0000107 |
NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012
|
|
G
|
Lad1
|
ladinin 1
|
located_in
|
IEA
|
GO_REF:0000044 GO_REF:0000043 GO_REF:0000104
|
UniProt |
|
GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 |
NCBI chr13:47,249,605...47,263,967
Ensembl chr13:47,249,605...47,263,967
|
|
G
|
Lama1
|
laminin subunit alpha 1
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:10964500), (PMID:2099832) GO_REF:0000107 GO_REF:0000043 GO_REF:0000044 GO_REF:0000117 GO_REF:0000033 (PMID:10639489), (PMID:11511678), (PMID:12051813), (PMID:12631063), (PMID:12670870), (PMID:1292752), (PMID:15895400), (PMID:15923608), (PMID:16467571), (PMID:16631359), (PMID:18757743), (PMID:1907584), (PMID:19651211), (PMID:21146513), (PMID:9264260), (PMID:9299121)
|
RGD Ensembl UniProt GO_Central |
PMID:1292752 PMID:1907584 PMID:2099832 PMID:9264260 PMID:9299121 PMID:10639489 PMID:10964500 PMID:11511678 PMID:12051813 PMID:12631063 PMID:12670870 PMID:15895400 PMID:15923608 PMID:16467571 PMID:16631359 PMID:18757743 PMID:19651211 PMID:21146513 More...
|
GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 |
NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
|
|
G
|
Lama2
|
laminin subunit alpha 2
|
located_in is_active_in
|
IDA IEA IBA ISO
|
GO_REF:0000117 GO_REF:0000107 GO_REF:0000043 GO_REF:0000044 GO_REF:0000033 (PMID:12051813), (PMID:15895400), (PMID:18757743), (PMID:9264260), (PMID:9396756), (PMID:9524190) (PMID:14557481), (PMID:2099832)
|
UniProt Ensembl GO_Central RGD |
PMID:2099832 PMID:9264260 PMID:9396756 PMID:9524190 PMID:12051813 PMID:14557481 PMID:15895400 PMID:18757743 PMID:11271373 More...
|
GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117, RGD:1600203 |
NCBI chr 1:17,672,675...18,320,641
Ensembl chr 1:17,672,536...18,320,530
|
|
G
|
Lama3
|
laminin subunit alpha 3
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:12051813), (PMID:15895400), (PMID:18757743), (PMID:9264260) GO_REF:0000044 GO_REF:0000117 GO_REF:0000107 GO_REF:0000043 GO_REF:0000033
|
RGD UniProt Ensembl GO_Central |
PMID:9264260 PMID:12051813 PMID:15895400 PMID:18757743 |
GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 |
NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353
|
|
G
|
Lama4
|
laminin subunit alpha 4
|
located_in
|
ISO IEA
|
(PMID:14557481) GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 GO_REF:0000043 (PMID:15895400), (PMID:18757743), (PMID:9346933), (PMID:9396756), (PMID:9614228)
|
RGD UniProt Ensembl |
PMID:9346933 PMID:9396756 PMID:9614228 PMID:14557481 PMID:15895400 PMID:18757743 More...
|
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 |
NCBI chr20:42,392,268...42,533,347
Ensembl chr20:42,392,268...42,533,347
|
|
G
|
Lama5
|
laminin subunit alpha 5
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:14557481) GO_REF:0000043 GO_REF:0000107 GO_REF:0000044 GO_REF:0000117 GO_REF:0000033 (PMID:11507772), (PMID:12051813), (PMID:12743034), (PMID:12921739), (PMID:14568553), (PMID:15895400), (PMID:16886065), (PMID:18757743), (PMID:19651211), (PMID:22665518), (PMID:8707838), (PMID:9299121), (PMID:9396756), (PMID:9735344) (PMID:10651091)
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RGD UniProt Ensembl GO_Central |
PMID:8707838 PMID:9299121 PMID:9396756 PMID:9735344 PMID:10651091 PMID:11507772 PMID:12051813 PMID:12743034 PMID:12921739 PMID:14557481 PMID:14568553 PMID:15895400 PMID:16886065 PMID:18757743 PMID:19651211 PMID:22665518 More...
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GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 GO_REF:0000117 |
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
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|
G
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Lamb1
|
laminin subunit beta 1
|
located_in
|
ISO IEA
|
(PMID:14557481), (PMID:2099832) GO_REF:0000107 GO_REF:0000043 GO_REF:0000044 (PMID:12631063), (PMID:12743034), (PMID:1292752), (PMID:15102706), (PMID:15895400), (PMID:16041630), (PMID:16631359), (PMID:18757743), (PMID:9264260), (PMID:9396756)
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RGD Ensembl UniProt |
PMID:1292752 PMID:2099832 PMID:9264260 PMID:9396756 PMID:12631063 PMID:12743034 PMID:14557481 PMID:15102706 PMID:15895400 PMID:16041630 PMID:16631359 PMID:18757743 More...
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GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 |
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
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|
G
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Lamb2
|
laminin subunit beta 2
|
located_in
|
ISO IEA
|
(PMID:10964500), (PMID:14557481), (PMID:2099832) GO_REF:0000107 GO_REF:0000043 GO_REF:0000044 (PMID:16041630), (PMID:7670489)
|
RGD Ensembl UniProt |
PMID:2099832 PMID:7670489 PMID:10964500 PMID:14557481 PMID:16041630 |
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 |
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
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G
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Lamb3
|
laminin subunit beta 3
|
located_in
|
ISO
|
(PMID:18757743), (PMID:8012114), (PMID:9264260)
|
RGD |
PMID:8012114 PMID:9264260 PMID:18757743 |
|
NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405
|
|
G
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Lamc1
|
laminin subunit gamma 1
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:14557481), (PMID:15159456), (PMID:22952693) GO_REF:0000107 GO_REF:0000043 GO_REF:0000044 (PMID:12051813), (PMID:12743034), (PMID:1292752), (PMID:15895400), (PMID:18757743), (PMID:7670489), (PMID:9264260), (PMID:9396756) GO_REF:0000033
|
RGD Ensembl UniProt GO_Central |
PMID:1292752 PMID:7670489 PMID:9264260 PMID:9396756 PMID:12051813 PMID:12743034 PMID:14557481 PMID:15159456 PMID:15895400 PMID:18757743 PMID:22952693 More...
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GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 |
NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
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|
G
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Lamc2
|
laminin subunit gamma 2
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000044 GO_REF:0000043 (PMID:11733994), (PMID:15895400), (PMID:18757743), (PMID:9264260)
|
GO_Central UniProt RGD |
PMID:9264260 PMID:11733994 PMID:15895400 PMID:18757743 |
GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 |
NCBI chr13:65,284,664...65,344,164
Ensembl chr13:65,284,664...65,344,200
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|
G
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Lamc3
|
laminin subunit gamma 3
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000044 GO_REF:0000043 (PMID:18757743)
|
GO_Central UniProt RGD |
PMID:18757743 |
GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 |
NCBI chr 3:15,165,220...15,226,697
Ensembl chr 3:15,165,220...15,226,697
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G
|
LOC120102904
|
ladinin-1-like
|
located_in
|
IEA
|
GO_REF:0000044 GO_REF:0000043 GO_REF:0000104
|
UniProt |
|
GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 |
NCBI chr 5:98,259,934...98,274,752
Ensembl chr 5:98,268,768...98,270,330
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|
G
|
Loxl1
|
lysyl oxidase-like 1
|
|
IDA
|
|
RGD |
PMID:22382377 |
RGD:7394733 |
NCBI chr 8:58,691,763...58,716,365
Ensembl chr 8:58,692,593...58,716,356
|
|
G
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Loxl2
|
lysyl oxidase-like 2
|
located_in
|
IDA IEA
|
PMID:21835952 GO_REF:0000043 GO_REF:0000044
|
UniProt |
PMID:21835952 |
GO_REF:0000043 GO_REF:0000044, RGD:8553848 |
NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
|
|
G
|
Marco
|
macrophage receptor with collagenous structure
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr13:31,616,278...31,648,521
Ensembl chr13:31,616,278...31,648,521
|
|
G
|
Matn2
|
matrilin 2
|
located_in
|
ISO IEA
|
(PMID:19295126) GO_REF:0000107
|
RGD Ensembl |
PMID:19295126 |
GO_REF:0000107 |
NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113
|
|
G
|
Megf8
|
multiple EGF-like-domains 8
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:90,030,057...90,079,423
Ensembl chr 1:80,902,574...80,951,613
|
|
G
|
Megf9
|
multiple EGF-like-domains 9
|
located_in
|
ISO IEA
|
(PMID:16981854) GO_REF:0000107
|
RGD Ensembl |
PMID:16981854 |
GO_REF:0000107 |
NCBI chr 5:83,993,565...84,105,622
Ensembl chr 5:83,993,565...84,105,622
|
|
G
|
Mmrn2
|
multimerin 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr16:9,705,925...9,727,405
Ensembl chr16:9,705,892...9,727,405
|
|
G
|
Nid1
|
nidogen 1
|
located_in
|
ISO IEA
|
(PMID:22952693) GO_REF:0000107 GO_REF:0000043 PR:P02468|PR:P37889|PR:Q05793|UniProtKB:P02462|UniProtKB:P08572 (PMID:10639489), (PMID:12051813), (PMID:12243745), (PMID:12588956), (PMID:14566019), (PMID:15895400), (PMID:16330543), (PMID:17596926), (PMID:18757743), (PMID:7670489) GO_REF:0000044
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RGD Ensembl UniProt |
PMID:7670489 PMID:10639489 PMID:12051813 PMID:12243745 PMID:12588956 PMID:14566019 PMID:15895400 PMID:16330543 PMID:17596926 PMID:18757743 PMID:22952693 More...
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GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 |
NCBI chr17:86,085,133...86,158,272
Ensembl chr17:86,085,077...86,158,267
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|
G
|
Nid2
|
nidogen 2
|
located_in is_active_in
|
IEA ISO IBA
|
GO_REF:0000044 GO_REF:0000107 GO_REF:0000043 PR:P02468|PR:P37889|PR:Q05793|UniProtKB:P02462|UniProtKB:P08572 (PMID:12243745), (PMID:15895400), (PMID:18757743) GO_REF:0000033 (PMID:22952693)
|
UniProt Ensembl RGD GO_Central |
PMID:12243745 PMID:15895400 PMID:18757743 PMID:22952693 |
GO_REF:0000033 GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 |
NCBI chr15:4,458,082...4,513,808
Ensembl chr15:4,458,084...4,513,843
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|
G
|
Nphs1
|
NPHS1 adhesion molecule, nephrin
|
|
IDA
|
MMO:0000686
|
RGD |
PMID:21876538 |
RGD:38599163 |
NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078
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|
G
|
Npnt
|
nephronectin
|
located_in
|
ISO IEA
|
(PMID:18757743), (PMID:21335239) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 PMID:21335239 |
GO_REF:0000107 |
NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
|
|
G
|
Ntn1
|
netrin 1
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:18757743)
|
GO_Central RGD |
PMID:18757743 |
GO_REF:0000033 |
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
|
|
G
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Ntn3
|
netrin 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:13,236,905...13,240,001
Ensembl chr10:13,236,905...13,240,001
|
|
G
|
Ntn4
|
netrin 4
|
located_in
|
ISO IEA
|
(PMID:15186747), (PMID:17588941), (PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:15186747 PMID:17588941 PMID:18757743 |
GO_REF:0000107 |
NCBI chr 7:28,186,611...28,300,390
Ensembl chr 7:28,186,611...28,300,390
|
|
G
|
Ntn5
|
netrin 5
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:96,156,948...96,165,997
Ensembl chr 1:96,156,985...96,165,630
|
|
G
|
P3h1
|
prolyl 3-hydroxylase 1
|
located_in
|
IDA
|
PMID:10455179
|
MGI |
PMID:10455179 |
RGD:633221 |
NCBI chr 5:132,841,868...132,856,664
Ensembl chr 5:132,841,928...132,856,659
|
|
G
|
P3h2
|
prolyl 3-hydroxylase 2
|
located_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:18487197) GO_REF:0000107
|
UniProt RGD Ensembl |
PMID:18487197 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:74,634,267...74,775,422
Ensembl chr11:74,634,267...74,775,421
|
|
G
|
Papln
|
papilin, proteoglycan-like sulfated glycoprotein
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr 6:103,398,166...103,432,199
Ensembl chr 6:103,398,838...103,432,206
|
|
G
|
Ptn
|
pleiotrophin
|
|
IDA
|
|
RGD |
PMID:9990431 |
RGD:10044215 |
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
|
|
G
|
Pxdn
|
peroxidasin
|
located_in
|
ISO IEA
|
(PMID:22842973) GO_REF:0000107
|
RGD Ensembl |
PMID:22842973 |
GO_REF:0000107 |
NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
|
|
G
|
Rell2
|
RELT-like 2
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr18:29,789,996...29,793,986
Ensembl chr18:29,790,415...29,793,986
|
|
G
|
Rpsa
|
ribosomal protein SA
|
|
IDA
|
|
RGD |
PMID:11553521 |
RGD:2299067 |
NCBI chr 8:119,851,225...119,855,103
Ensembl chr 8:119,851,225...119,855,247
|
|
G
|
Runx1
|
RUNX family transcription factor 1
|
located_in
|
ISO
|
(PMID:17011173)
|
RGD |
PMID:17011173 |
|
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
|
|
G
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Serpinf1
|
serpin family F member 1
|
|
IDA
|
|
RGD |
PMID:15616035 |
RGD:1359799 |
NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
|
|
G
|
Smc3
|
structural maintenance of chromosomes 3
|
located_in
|
IDA TAS
|
PMID:8621634
|
RGD CAFA |
PMID:9015313 PMID:8621634 |
RGD:61563, RGD:12793010 |
NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522
|
|
G
|
Smoc1
|
SPARC related modular calcium binding 1
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:18757743)
|
GO_Central RGD |
PMID:18757743 |
GO_REF:0000033 |
NCBI chr 6:100,701,330...100,897,441
Ensembl chr 6:100,701,346...100,862,699
|
|
G
|
Smoc2
|
SPARC related modular calcium binding 2
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:18757743)
|
GO_Central RGD |
PMID:18757743 |
GO_REF:0000033 |
NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693
|
|
G
|
Sparc
|
secreted protein acidic and cysteine rich
|
located_in
|
IEA
|
GO_REF:0000044 GO_REF:0000043
|
UniProt |
|
GO_REF:0000043 GO_REF:0000044 |
NCBI chr10:39,516,394...39,538,252
Ensembl chr10:39,516,406...39,538,396
|
|
G
|
Spn
|
sialophorin
|
located_in
|
ISO
|
(PMID:7514104)
|
RGD |
PMID:7514104 |
|
NCBI chr 1:181,746,937...181,759,564
Ensembl chr 1:181,746,429...181,759,628
|
|
G
|
Tf
|
transferrin
|
|
IDA
|
|
RGD |
PMID:1723977 |
RGD:1625719 |
NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511
|
|
G
|
Tgfb2
|
transforming growth factor, beta 2
|
|
IDA
|
|
RGD |
PMID:16479080 |
RGD:2302094 |
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
|
|
G
|
Tgfbi
|
transforming growth factor, beta induced
|
|
IDA
|
|
RGD |
PMID:12911551 |
RGD:1304421 |
NCBI chr17:7,955,603...7,984,903
Ensembl chr17:7,955,603...7,985,240
|
|
G
|
Thbs2
|
thrombospondin 2
|
located_in
|
ISO IEA
|
(PMID:10669089) GO_REF:0000107
|
RGD Ensembl |
PMID:10669089 |
GO_REF:0000107 |
NCBI chr 1:55,670,394...55,699,789
Ensembl chr 1:55,670,394...55,699,789
|
|
G
|
Thbs4
|
thrombospondin 4
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:17927980)
|
Ensembl RGD |
PMID:17927980 |
GO_REF:0000107 |
NCBI chr 2:23,983,158...24,025,289
Ensembl chr 2:23,983,158...24,026,313
|
|
G
|
Timp1
|
TIMP metallopeptidase inhibitor 1
|
located_in
|
IDA IEA ISO
|
GO_REF:0000107 (PMID:12950084)
|
Ensembl RGD |
PMID:12950084 PMID:9579471 |
GO_REF:0000107, RGD:2290365 |
NCBI chr X:1,212,969...1,217,714
Ensembl chr X:1,212,972...1,217,664
|
|
G
|
Timp2
|
TIMP metallopeptidase inhibitor 2
|
located_in
|
ISO
|
(PMID:12950084)
|
RGD |
PMID:12950084 |
|
NCBI chr10:103,541,199...103,590,611
Ensembl chr10:103,531,505...103,590,611
|
|
G
|
Timp3
|
TIMP metallopeptidase inhibitor 3
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:12950084)
|
Ensembl RGD |
PMID:12950084 |
GO_REF:0000107 |
NCBI chr 7:17,520,827...17,571,850
Ensembl chr 7:17,521,919...17,571,839
|
|
G
|
Tinag
|
tubulointerstitial nephritis antigen
|
located_in
|
ISO IEA
|
(PMID:1762287) GO_REF:0000107
|
RGD Ensembl |
PMID:1762287 |
GO_REF:0000107 |
NCBI chr 8:77,800,031...77,885,077
Ensembl chr 8:77,800,032...77,885,077
|
|
G
|
Tnc
|
tenascin C
|
located_in
|
ISO IEA
|
(PMID:18950615), (PMID:7687262), (PMID:9013311) GO_REF:0000107
|
RGD Ensembl |
PMID:7687262 PMID:9013311 PMID:18950615 |
GO_REF:0000107 |
NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
|
|
G
|
Ush2a
|
usherin
|
located_in is_active_in
|
ISO IBA IEA
|
(PMID:12433396) (PMID:14676276) GO_REF:0000033 GO_REF:0000107
|
RGD GO_Central Ensembl |
PMID:12433396 PMID:14676276 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
|
|
G
|
Vegfa
|
vascular endothelial growth factor A
|
|
IDA
|
|
RGD |
PMID:11940521 |
RGD:628330 |
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
|
|
G
|
Vtn
|
vitronectin
|
|
IDA
|
|
RGD |
PMID:11728964 |
RGD:10003096 |
NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
|
|
G
|
Vwa1
|
von Willebrand factor A domain containing 1
|
located_in
|
ISO IEA
|
(PMID:18314316), (PMID:18757743) GO_REF:0000044 GO_REF:0000043 GO_REF:0000107
|
RGD UniProt Ensembl |
PMID:18314316 PMID:18757743 |
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 |
NCBI chr 5:166,377,451...166,382,784
Ensembl chr 5:166,377,455...166,382,637
|
|
G
|
Vwa2
|
von Willebrand factor A domain containing 2
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:19651211)
|
GO_Central RGD |
PMID:19651211 |
GO_REF:0000033 |
NCBI chr 1:255,922,263...255,963,920
Ensembl chr 1:255,923,541...255,963,934
|
|
G
|
Vwc2
|
von Willebrand factor C domain containing 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr14:85,683,670...85,825,068
Ensembl chr14:85,684,414...85,818,524
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col1a1
|
collagen type I alpha 1 chain
|
part_of
|
ISO IEA IBA
|
MGI:1857154 (PMID:7790374), (PMID:8018053) GO_REF:0000107 GO_REF:0000033 (PMID:14976317), (PMID:17576241), (PMID:19932771), (PMID:26848503), (PMID:28281531)
|
RGD Ensembl GO_Central |
PMID:7790374 PMID:8018053 PMID:14976317 PMID:17576241 PMID:19932771 PMID:26848503 PMID:28281531 More...
|
GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
|
|
G
|
Col1a2
|
collagen type I alpha 2 chain
|
part_of
|
IBA ISO
|
GO_REF:0000033 (PMID:17955022), (PMID:18375391), (PMID:19932771), (PMID:26848503) (PMID:7825727)
|
GO_Central RGD |
PMID:7825727 PMID:17955022 PMID:18375391 PMID:19932771 PMID:26848503 |
GO_REF:0000033 |
NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col2a1
|
collagen type II alpha 1 chain
|
part_of
|
ISO IBA IEA
|
(PMID:8660302) GO_REF:0000033 MGI:1857275 (PMID:7276808), (PMID:9880238) GO_REF:0000107
|
RGD GO_Central Ensembl |
PMID:7276808 PMID:8660302 PMID:9880238 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col3a1
|
collagen type III alpha 1 chain
|
part_of
|
ISO
|
(PMID:7825727) (PMID:17576241), (PMID:18805790), (PMID:19932771), (PMID:7487954)
|
RGD |
PMID:7487954 PMID:7825727 PMID:17576241 PMID:18805790 PMID:19932771 |
|
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col4a1
|
collagen type IV alpha 1 chain
|
part_of
|
ISO IEA
|
(PMID:16107487) GO_REF:0000107 (PMID:12101409)
|
RGD Ensembl |
PMID:12101409 PMID:16107487 |
GO_REF:0000107 |
NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
|
|
G
|
Col4a2
|
collagen type IV alpha 2 chain
|
part_of
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:12101409)
|
GO_Central Ensembl RGD |
PMID:12101409 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839
|
|
G
|
Col4a3
|
collagen type IV alpha 3 chain
|
part_of
|
ISO
|
(PMID:10766752) (PMID:12101409)
|
RGD |
PMID:10766752 PMID:12101409 |
|
NCBI chr 9:83,875,849...84,004,955
Ensembl chr 9:83,875,561...84,001,895
|
|
G
|
Col4a4
|
collagen type IV alpha 4 chain
|
part_of
|
ISO IEA IBA
|
(PMID:7523402) GO_REF:0000107 (PMID:7962065) GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:7523402 PMID:7962065 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876
|
|
G
|
Col4a5
|
collagen type IV alpha 5 chain
|
part_of
|
ISO
|
(PMID:12101409)
|
RGD |
PMID:12101409 |
|
NCBI chr X:105,118,762...105,322,699
Ensembl chr X:105,118,820...105,322,692
|
|
G
|
Col4a6
|
collagen type IV alpha 6 chain
|
part_of
|
IBA ISO
|
GO_REF:0000033 (PMID:10965041), (PMID:12101409)
|
GO_Central RGD |
PMID:10965041 PMID:12101409 |
GO_REF:0000033 |
NCBI chr X:104,766,463...105,117,499
Ensembl chr X:104,766,957...105,117,500
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col13a1
|
collagen type XIII alpha 1 chain
|
part_of
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032
|
|
G
|
Col9a1
|
collagen type IX alpha 1 chain
|
part_of
|
IEA ISO
|
GO_REF:0000107 (PMID:27897211), (PMID:8660302)
|
Ensembl RGD |
PMID:8660302 PMID:27897211 |
GO_REF:0000107 |
NCBI chr 9:26,585,034...26,668,222
Ensembl chr 9:26,585,034...26,668,213
|
|
G
|
Col9a2
|
collagen type IX alpha 2 chain
|
part_of
|
ISO IEA
|
(PMID:27897211), (PMID:8660302) GO_REF:0000107
|
RGD Ensembl |
PMID:8660302 PMID:27897211 |
GO_REF:0000107 |
NCBI chr 5:134,607,616...134,624,678
Ensembl chr 5:134,607,616...134,624,677
|
|
G
|
Col9a3
|
collagen type IX alpha 3 chain
|
part_of
|
IBA ISO
|
GO_REF:0000033 (PMID:27897211), (PMID:8660302)
|
GO_Central RGD |
PMID:8660302 PMID:27897211 |
GO_REF:0000033 |
NCBI chr 3:167,711,776...167,734,468
Ensembl chr 3:167,711,840...167,734,465
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col5a1
|
collagen type V alpha 1 chain
|
part_of
|
TAS IBA ISO
|
GO_REF:0000033 (PMID:9683580)
|
GO_Central RGD |
PMID:9683580 PMID:10852920 |
GO_REF:0000033, RGD:70693 |
NCBI chr 3:31,606,475...31,755,097
Ensembl chr 3:11,208,512...11,354,588
|
|
G
|
Col5a2
|
collagen type V alpha 2 chain
|
part_of
|
TAS IBA ISO
|
GO_REF:0000033 (PMID:9425231), (PMID:9783710)
|
GO_Central RGD |
PMID:9425231 PMID:9783710 PMID:9822201 |
GO_REF:0000033, RGD:70694 |
NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154
|
|
G
|
Col5a3
|
collagen type V alpha 3 chain
|
part_of
|
TAS IEA ISO
|
GO_REF:0000107 (PMID:15908193)
|
Ensembl RGD |
PMID:15908193 PMID:10852920 |
GO_REF:0000107, RGD:70693 |
NCBI chr 8:19,304,564...19,349,809
Ensembl chr 8:19,304,571...19,349,853
|
|
G
|
Emid1
|
EMI domain containing 1
|
part_of
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:80,000,486...80,043,561
Ensembl chr14:80,000,486...80,043,620
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Dcn
|
decorin
|
|
IDA
|
|
RGD |
PMID:12840020 |
RGD:728372 |
NCBI chr 7:32,281,252...32,321,291
Ensembl chr 7:32,281,252...32,321,270
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col10a1
|
collagen type X alpha 1 chain
|
part_of
|
ISO
|
(PMID:11839302)
|
RGD |
PMID:11839302 |
|
NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col11a1
|
collagen type XI alpha 1 chain
|
part_of
|
ISO IBA
|
(PMID:3182841) GO_REF:0000033
|
RGD GO_Central |
PMID:3182841 |
GO_REF:0000033 |
NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
|
|
G
|
Col28a1
|
collagen type XXVIII alpha 1 chain
|
part_of
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:36,069,980...36,223,128
Ensembl chr 4:36,069,970...36,223,220
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col12a1
|
collagen type XII alpha 1 chain
|
|
IDA
|
|
RGD |
PMID:10419532 |
RGD:727275 |
NCBI chr 8:80,547,592...80,665,665
Ensembl chr 8:80,547,593...80,665,686
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col18a1
|
collagen type XVIII alpha 1 chain
|
|
TAS
|
|
RGD |
PMID:11592600 |
RGD:632362 |
NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
AABR07044388.2
|
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
Ensembl chr20:4,026,463...4,085,578
|
|
G
|
Abi3bp
|
ABI family member 3 binding protein
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
|
|
G
|
Adamts1
|
ADAM metallopeptidase with thrombospondin type 1 motif, 1
|
|
IDA
|
|
RGD |
PMID:15777654 |
RGD:9681749 |
NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103
|
|
G
|
Adamts10
|
ADAM metallopeptidase with thrombospondin type 1 motif, 10
|
located_in
|
ISO
|
(PMID:21402694)
|
RGD |
PMID:21402694 |
|
NCBI chr 7:14,331,659...14,361,620
Ensembl chr 7:14,331,745...14,361,620
|
|
G
|
Agrn
|
agrin
|
located_in
|
ISO
|
(PMID:17628813)
|
RGD |
PMID:17628813 |
|
NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
|
|
G
|
Ahsg
|
alpha-2-HS-glycoprotein
|
|
IDA
|
|
RGD |
PMID:7794128 |
RGD:1626075 |
NCBI chr11:78,121,388...78,127,998
Ensembl chr11:78,117,918...78,145,999
|
|
G
|
Amelx
|
amelogenin, X-linked
|
located_in is_active_in
|
ISO IBA
|
(PMID:2509010) GO_REF:0000033
|
RGD GO_Central |
PMID:2509010 |
GO_REF:0000033 |
NCBI chr X:25,076,362...25,087,660
Ensembl chr X:25,076,362...25,087,660
|
|
G
|
Angpt1
|
angiopoietin 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
|
|
G
|
Angpt2
|
angiopoietin 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr16:71,088,364...71,138,805
Ensembl chr16:71,088,364...71,138,804
|
|
G
|
Angpt4
|
angiopoietin 4
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:140,420,389...140,454,213
Ensembl chr 3:140,420,389...140,453,583
|
|
G
|
Angptl1
|
angiopoietin-like 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr13:68,963,186...68,981,649
Ensembl chr13:68,962,991...68,992,570
|
|
G
|
Angptl2
|
angiopoietin-like 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:16,517,185...16,547,024
Ensembl chr 3:16,517,420...16,548,178
|
|
G
|
Angptl3
|
angiopoietin-like 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:113,703,007...113,710,044
Ensembl chr 5:113,703,012...113,709,957
|
|
G
|
Angptl4
|
angiopoietin-like 4
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:14,550,288...14,557,797
Ensembl chr 7:14,550,311...14,556,519
|
|
G
|
Angptl6
|
angiopoietin-like 6
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:19,413,617...19,419,925
Ensembl chr 8:19,413,619...19,419,925
|
|
G
|
Angptl7
|
angiopoietin like 7
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:158,932,096...158,937,281
Ensembl chr 5:158,932,794...158,937,324
|
|
G
|
Bglap
|
bone gamma-carboxyglutamate protein
|
located_in
|
ISO
|
(PMID:8101026), (PMID:8218200)
|
RGD |
PMID:8101026 PMID:8218200 |
|
NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495
|
|
G
|
Bmp7
|
bone morphogenetic protein 7
|
|
IDA
|
|
RGD |
PMID:9626398 |
RGD:2289041 |
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
|
|
G
|
Calr
|
calreticulin
|
|
IDA
|
|
RGD |
PMID:12782144 |
RGD:2326184 |
NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
|
|
G
|
Ccn3
|
cellular communication network factor 3
|
|
IDA
|
|
RGD |
PMID:19286457 |
RGD:2306292 |
NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019
|
|
G
|
Chadl
|
chondroadherin-like
|
located_in
|
ISO
|
(PMID:25451920)
|
RGD |
PMID:25451920 |
|
NCBI chr 7:113,205,323...113,218,678
Ensembl chr 7:113,210,748...113,217,272
|
|
G
|
Cilp
|
cartilage intermediate layer protein
|
located_in is_active_in
|
ISO IBA
|
(PMID:9722583) GO_REF:0000033
|
RGD GO_Central |
PMID:9722583 |
GO_REF:0000033 |
NCBI chr 8:65,777,281...65,792,251
Ensembl chr 8:65,777,281...65,792,251
|
|
G
|
Clu
|
clusterin
|
located_in
|
ISS
|
GO_REF:0000024
|
UniProt |
|
GO_REF:0000024 |
NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
|
|
G
|
Coch
|
cochlin
|
located_in is_active_in
|
ISO IBA
|
(PMID:22610276) GO_REF:0000033
|
RGD GO_Central |
PMID:22610276 |
GO_REF:0000033 |
NCBI chr 6:69,031,139...69,045,124
Ensembl chr 6:69,031,167...69,045,109
|
|
G
|
Col10a1
|
collagen type X alpha 1 chain
|
is_active_in
|
IDA IBA
|
GO_REF:0000033
|
GO_Central RGD |
PMID:7649371 |
GO_REF:0000033, RGD:1298775 |
NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494
|
|
G
|
Col11a1
|
collagen type XI alpha 1 chain
|
is_active_in
|
IDA IBA
|
GO_REF:0000033
|
GO_Central RGD |
PMID:17062562 |
GO_REF:0000033, RGD:1600882 |
NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
|
|
G
|
Col11a2
|
collagen type XI alpha 2 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr20:4,786,932...4,816,598
Ensembl chr20:4,786,929...4,815,985
|
|
G
|
Col12a1
|
collagen type XII alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:80,547,592...80,665,665
Ensembl chr 8:80,547,593...80,665,686
|
|
G
|
Col17a1
|
collagen type XVII alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:246,530,589...246,577,559
Ensembl chr 1:246,531,367...246,577,632
|
|
G
|
Col18a1
|
collagen type XVIII alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
|
|
G
|
Col19a1
|
collagen type XIX alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 9:26,673,916...27,022,139
Ensembl chr 9:26,675,391...27,022,106
|
|
G
|
Col1a1
|
collagen type I alpha 1 chain
|
located_in is_active_in
|
ISO IBA
|
(PMID:34368841) GO_REF:0000033
|
RGD GO_Central |
PMID:34368841 |
GO_REF:0000033 |
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
|
|
G
|
Col1a2
|
collagen type I alpha 2 chain
|
located_in is_active_in
|
ISO IBA
|
(PMID:34368841) GO_REF:0000033
|
RGD GO_Central |
PMID:34368841 |
GO_REF:0000033 |
NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
|
|
G
|
Col23a1
|
collagen type XXIII alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr10:35,549,090...35,839,152
Ensembl chr10:35,549,113...35,836,314
|
|
G
|
Col27a1
|
collagen type XXVII alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174
|
|
G
|
Col28a1
|
collagen type XXVIII alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:36,069,980...36,223,128
Ensembl chr 4:36,069,970...36,223,220
|
|
G
|
Col2a1
|
collagen type II alpha 1 chain
|
is_active_in
|
IDA IBA
|
GO_REF:0000033
|
GO_Central RGD |
PMID:7649371 |
GO_REF:0000033, RGD:1298775 |
NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546
|
|
G
|
Col3a1
|
collagen type III alpha 1 chain
|
is_active_in located_in
|
IDA IBA ISO
|
GO_REF:0000033 (PMID:14970208), (PMID:7487954)
|
GO_Central RGD |
PMID:7487954 PMID:14970208 PMID:20610530 |
GO_REF:0000033, RGD:7257557 |
NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
|
|
G
|
Col4a1
|
collagen type IV alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412
|
|
G
|
Col4a2
|
collagen type IV alpha 2 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839
|
|
G
|
Col4a3
|
collagen type IV alpha 3 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 9:83,875,849...84,004,955
Ensembl chr 9:83,875,561...84,001,895
|
|
G
|
Col4a4
|
collagen type IV alpha 4 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876
|
|
G
|
Col4a5
|
collagen type IV alpha 5 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:105,118,762...105,322,699
Ensembl chr X:105,118,820...105,322,692
|
|
G
|
Col4a6
|
collagen type IV alpha 6 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr X:104,766,463...105,117,499
Ensembl chr X:104,766,957...105,117,500
|
|
G
|
Col5a1
|
collagen type V alpha 1 chain
|
located_in is_active_in
|
ISO IBA
|
(PMID:14970208) GO_REF:0000033
|
RGD GO_Central |
PMID:14970208 |
GO_REF:0000033 |
NCBI chr 3:31,606,475...31,755,097
Ensembl chr 3:11,208,512...11,354,588
|
|
G
|
Col5a2
|
collagen type V alpha 2 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154
|
|
G
|
Col5a3
|
collagen type V alpha 3 chain
|
is_active_in
|
IDA IBA
|
GO_REF:0000033
|
GO_Central RGD |
PMID:15383532 |
GO_REF:0000033, RGD:5683638 |
NCBI chr 8:19,304,564...19,349,809
Ensembl chr 8:19,304,571...19,349,853
|
|
G
|
Col6a2
|
collagen type VI alpha 2 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr20:12,021,676...12,049,425
Ensembl chr20:12,021,767...12,057,564
|
|
G
|
Col6a5
|
collagen type VI alpha 5 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:106,483,806...106,584,114
Ensembl chr 8:106,483,799...106,584,113
|
|
G
|
Col6a6
|
collagen type VI alpha 6 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:106,318,010...106,473,419
Ensembl chr 8:106,306,422...106,473,472
|
|
G
|
Col8a1
|
collagen type VIII alpha 1 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424
|
|
G
|
Col8a2
|
collagen type VIII alpha 2 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:138,586,201...138,613,627
Ensembl chr 5:138,585,999...138,612,850
|
|
G
|
Col9a2
|
collagen type IX alpha 2 chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:134,607,616...134,624,678
Ensembl chr 5:134,607,616...134,624,677
|
|
G
|
Colq
|
collagen like tail subunit of asymmetric acetylcholinesterase
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107
|
|
G
|
Comp
|
cartilage oligomeric matrix protein
|
is_active_in
|
IDA IBA
|
GO_REF:0000033
|
GO_Central RGD |
PMID:16778685 |
GO_REF:0000033, RGD:1600712 |
NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
|
|
G
|
Dmbt1
|
deleted in malignant brain tumors 1
|
|
IDA
|
|
RGD |
PMID:11121438 |
RGD:1599784 |
NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478
|
|
G
|
Dspp
|
dentin sialophosphoprotein
|
|
IDA
|
|
RGD |
PMID:16776771 |
RGD:1599799 |
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
|
|
G
|
Ecm1
|
extracellular matrix protein 1
|
located_in is_active_in
|
ISO IBA
|
(PMID:20870722) GO_REF:0000033
|
RGD GO_Central |
PMID:20870722 |
GO_REF:0000033 |
NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671
|
|
G
|
Emid1
|
EMI domain containing 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:80,000,486...80,043,561
Ensembl chr14:80,000,486...80,043,620
|
|
G
|
Emilin1
|
elastin microfibril interfacer 1
|
located_in
|
ISO
|
(PMID:26462740)
|
RGD |
PMID:26462740 |
|
NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698
|
|
G
|
F2
|
coagulation factor II, thrombin
|
is_active_in
|
IDA IBA
|
GO_REF:0000033
|
GO_Central RGD |
PMID:21191574 |
GO_REF:0000033, RGD:7387308 |
NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
|
|
G
|
F3
|
coagulation factor III, tissue factor
|
located_in
|
ISO
|
(PMID:2704749)
|
RGD |
PMID:2704749 |
|
NCBI chr 2:209,827,061...209,838,666
Ensembl chr 2:209,826,959...209,838,668
|
|
G
|
Fbln5
|
fibulin 5
|
located_in
|
ISO ISS
|
(PMID:17035250) (PMID:15528465) GO_REF:0000024
|
RGD UniProt |
PMID:15528465 PMID:17035250 |
GO_REF:0000024 |
NCBI chr 6:120,899,219...120,977,829
Ensembl chr 6:120,899,224...120,977,755
|
|
G
|
Fbn1
|
fibrillin 1
|
located_in
|
IDA ISO
|
(PMID:17099216), (PMID:24039232)
|
RGD |
PMID:17099216 PMID:24039232 PMID:15849235 |
RGD:1601147 |
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
|
|
G
|
Fcna
|
ficolin A
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:8,445,904...8,449,128
Ensembl chr 3:8,445,907...8,449,105
|
|
G
|
Fcnb
|
ficolin B
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:11,393,713...11,402,198
Ensembl chr 3:11,393,739...11,402,151
|
|
G
|
Fdcsp
|
follicular dendritic cell secreted protein
|
is_active_in
|
ISO
|
(PMID:18806264)
|
RGD |
PMID:18806264 |
|
NCBI chr14:20,169,691...20,173,983
Ensembl chr14:20,169,691...20,173,983
|
|
G
|
Fgb
|
fibrinogen beta chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:168,394,901...168,402,863
Ensembl chr 2:168,394,916...168,405,979
|
|
G
|
Fgf10
|
fibroblast growth factor 10
|
located_in
|
ISO
|
(PMID:17959718)
|
RGD |
PMID:17959718 |
|
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
|
|
G
|
Fgfr2
|
fibroblast growth factor receptor 2
|
located_in
|
ISO
|
(PMID:17959718)
|
RGD |
PMID:17959718 |
|
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
|
|
G
|
Fgg
|
fibrinogen gamma chain
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:168,354,880...168,362,325
Ensembl chr 2:168,355,013...168,362,322
|
|
G
|
Fgl1
|
fibrinogen-like 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr16:51,120,652...51,150,907
Ensembl chr16:51,120,694...51,151,093
|
|
G
|
Fgl2
|
fibrinogen-like 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207
|
|
G
|
Fibcd1
|
fibrinogen C domain containing 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:15,092,682...15,126,371
Ensembl chr 3:15,092,681...15,126,399
|
|
G
|
Fmod
|
fibromodulin
|
|
IDA
|
|
RGD |
PMID:12941075 |
RGD:2315082 |
NCBI chr13:45,493,517...45,504,134
Ensembl chr13:45,493,517...45,504,133
|
|
G
|
Fn1
|
fibronectin 1
|
located_in
|
ISO
|
(PMID:16157329), (PMID:1632457) (PMID:34368841)
|
RGD |
PMID:1632457 PMID:16157329 PMID:34368841 |
|
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
|
|
G
|
Fras1
|
Fraser extracellular matrix complex subunit 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:12,791,407...13,200,862
Ensembl chr14:12,793,599...13,200,726
|
|
G
|
Frem1
|
Fras1 related extracellular matrix 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:97,321,266...97,469,523
Ensembl chr 5:97,322,538...97,469,543
|
|
G
|
Frem2
|
FRAS1 related extracellular matrix 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:137,602,784...137,740,785
Ensembl chr 2:137,602,784...137,740,785
|
|
G
|
Frem3
|
FRAS1 related extracellular matrix 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr19:27,308,469...27,366,771
Ensembl chr19:27,308,469...27,366,771
|
|
G
|
Gh1
|
growth hormone 1
|
|
IDA
|
|
RGD |
PMID:9255605 |
RGD:12904880 |
NCBI chr10:91,228,102...91,230,079
Ensembl chr10:91,228,103...91,230,078
|
|
G
|
Hsp90aa1
|
heat shock protein 90 alpha family class A member 1
|
|
IDA
|
|
RGD |
PMID:15497505 |
RGD:2316936 |
NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
|
|
G
|
Hspg2
|
heparan sulfate proteoglycan 2
|
|
IDA
|
|
RGD |
PMID:15928048 |
RGD:1624263 |
NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594
|
|
G
|
Htra1
|
HtrA serine peptidase 1
|
is_active_in
|
IDA IBA
|
dentin matrix GO_REF:0000033
|
GO_Central RGD |
PMID:22595117 |
GO_REF:0000033, RGD:7394756 |
NCBI chr 1:185,497,815...185,547,380
Ensembl chr 1:185,497,735...185,547,379
|
|
G
|
Igfbp7
|
insulin-like growth factor binding protein 7
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:30,737,414...30,797,317
Ensembl chr14:30,737,164...30,797,314
|
|
G
|
Igfbpl1
|
insulin-like growth factor binding protein-like 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:60,076,428...60,091,833
Ensembl chr 5:60,076,429...60,091,833
|
|
G
|
Lamb1
|
laminin subunit beta 1
|
|
IDA
|
|
RGD |
PMID:15928048 |
RGD:1624263 |
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
|
|
G
|
Lamc1
|
laminin subunit gamma 1
|
|
IDA
|
|
RGD |
PMID:15928048 |
RGD:1624263 |
NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
|
|
G
|
Lox
|
lysyl oxidase
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477
|
|
G
|
Loxl1
|
lysyl oxidase-like 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:58,691,763...58,716,365
Ensembl chr 8:58,692,593...58,716,356
|
|
G
|
Loxl2
|
lysyl oxidase-like 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
|
|
G
|
Loxl3
|
lysyl oxidase-like 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
|
|
G
|
Loxl4
|
lysyl oxidase-like 4
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:241,396,183...241,416,385
Ensembl chr 1:241,397,983...241,416,322
|
|
G
|
Lrrc15
|
leucine rich repeat containing 15
|
located_in
|
ISO
|
(PMID:16098915)
|
RGD |
PMID:16098915 |
|
NCBI chr11:70,469,817...70,484,268
Ensembl chr11:70,469,804...70,484,267
|
|
G
|
Ltbp1
|
latent transforming growth factor beta binding protein 1
|
located_in
|
IDA ISO
|
(PMID:16157329)
|
RGD |
PMID:16157329 PMID:9766531 |
RGD:10412061 |
NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349
|
|
G
|
Ltbp3
|
latent transforming growth factor beta binding protein 3
|
located_in
|
ISO
|
(PMID:16157329)
|
RGD |
PMID:16157329 |
|
NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975
|
|
G
|
Ltbp4
|
latent transforming growth factor beta binding protein 4
|
located_in
|
ISO
|
(PMID:16157329)
|
RGD |
PMID:16157329 |
|
NCBI chr 1:82,600,136...82,634,346
Ensembl chr 1:82,600,136...82,632,178
|
|
G
|
Matn1
|
matrilin 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:143,117,198...143,127,140
Ensembl chr 5:143,117,504...143,127,059
|
|
G
|
Matn2
|
matrilin 2
|
located_in is_active_in
|
ISO IBA
|
(PMID:10224097) GO_REF:0000033
|
RGD GO_Central |
PMID:10224097 |
GO_REF:0000033 |
NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113
|
|
G
|
Matn3
|
matrilin 3
|
located_in is_active_in
|
ISO IBA
|
(PMID:10660556) GO_REF:0000033
|
RGD GO_Central |
PMID:10660556 |
GO_REF:0000033 |
NCBI chr 6:31,748,517...31,768,564
Ensembl chr 6:31,748,474...31,768,101
|
|
G
|
Matn4
|
matrilin 4
|
located_in is_active_in
|
ISO IBA
|
(PMID:11279097) GO_REF:0000033
|
RGD GO_Central |
PMID:11279097 |
GO_REF:0000033 |
NCBI chr 3:153,120,605...153,135,628
Ensembl chr 3:153,120,632...153,135,865
|
|
G
|
Mfap4
|
microfibril associated protein 4
|
located_in is_active_in
|
ISO IBA
|
(PMID:26601954) GO_REF:0000033
|
RGD GO_Central |
PMID:26601954 |
GO_REF:0000033 |
NCBI chr10:46,167,158...46,170,176
Ensembl chr10:46,167,217...46,170,155
|
|
G
|
Mgp
|
matrix Gla protein
|
|
IDA
|
|
RGD |
PMID:11716499 |
RGD:2293597 |
NCBI chr 4:169,766,290...169,769,612
Ensembl chr 4:169,766,279...169,769,667
|
|
G
|
Myoc
|
myocilin
|
located_in
|
ISS ISO
|
GO_REF:0000024 (PMID:11773026)
|
UniProt RGD |
PMID:11773026 |
GO_REF:0000024 |
NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127
|
|
G
|
Ndp
|
norrin cystine knot growth factor NDP
|
located_in is_active_in
|
ISO IBA
|
(PMID:15035989) GO_REF:0000033
|
RGD GO_Central |
PMID:15035989 |
GO_REF:0000033 |
NCBI chr X:8,379,569...8,404,019
Ensembl chr X:5,796,487...5,820,934
|
|
G
|
Npnt
|
nephronectin
|
located_in
|
ISO
|
(PMID:21335239)
|
RGD |
PMID:21335239 |
|
NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
|
|
G
|
Otol1
|
otolin 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:154,339,612...154,349,050
Ensembl chr 2:154,339,612...154,349,023
|
|
G
|
Pcsk6
|
proprotein convertase subtilisin/kexin type 6
|
located_in is_active_in
|
ISO IBA
|
(PMID:12535616) GO_REF:0000033
|
RGD GO_Central |
PMID:12535616 |
GO_REF:0000033 |
NCBI chr 1:119,428,978...119,627,626
Ensembl chr 1:119,429,265...119,627,596
|
|
G
|
Plat
|
plasminogen activator, tissue type
|
NOT|located_in
|
ISO
|
(PMID:1632457)
|
RGD |
PMID:1632457 |
|
NCBI chr16:69,240,582...69,265,177
Ensembl chr16:69,240,585...69,268,223
|
|
G
|
Plod1
|
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:158,340,674...158,367,581
Ensembl chr 5:158,340,490...158,367,620
|
|
G
|
Plod2
|
procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 8:93,084,548...93,167,255
Ensembl chr 8:93,084,513...93,167,255
|
|
G
|
Plod3
|
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
|
located_in is_active_in
|
ISO IBA
|
(PMID:27435297) GO_REF:0000033
|
RGD GO_Central |
PMID:27435297 |
GO_REF:0000033 |
NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
|
|
G
|
Plscr1
|
phospholipid scramblase 1
|
located_in
|
ISO ISS
|
(PMID:20870722) GO_REF:0000024
|
RGD UniProt |
PMID:20870722 |
GO_REF:0000024 |
NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692
|
|
G
|
Podnl1
|
podocan-like 1
|
located_in
|
ISO
|
(PMID:21672516)
|
RGD |
PMID:21672516 |
|
NCBI chr19:24,027,261...24,033,867
Ensembl chr19:24,027,297...24,033,846
|
|
G
|
Postn
|
periostin
|
located_in
|
ISO
|
(PMID:18450759)
|
RGD |
PMID:18450759 |
|
NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
|
|
G
|
Prg4
|
proteoglycan 4
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr13:62,487,257...62,504,657
Ensembl chr13:62,487,257...62,504,119
|
|
G
|
Pxdn
|
peroxidasin
|
located_in
|
ISO
|
(PMID:19590037)
|
RGD |
PMID:19590037 |
|
NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
|
|
G
|
Rarres2
|
retinoic acid receptor responder 2
|
located_in
|
ISO
|
(PMID:19443732)
|
RGD |
PMID:19443732 |
|
NCBI chr 4:77,522,549...77,525,733
Ensembl chr 4:77,522,535...77,525,556
|
|
G
|
Rpsa
|
ribosomal protein SA
|
|
IDA
|
|
RGD |
PMID:11553521 |
RGD:2299067 |
NCBI chr 8:119,851,225...119,855,103
Ensembl chr 8:119,851,225...119,855,247
|
|
G
|
Scara3
|
scavenger receptor class A, member 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr15:40,139,873...40,172,866
Ensembl chr15:40,140,161...40,172,894
|
|
G
|
Serpine1
|
serpin family E member 1
|
located_in
|
ISO
|
(PMID:1632457)
|
RGD |
PMID:1632457 |
|
NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
|
|
G
|
Serpine2
|
serpin family E member 2
|
located_in
|
ISO
|
(PMID:3279057)
|
RGD |
PMID:3279057 |
|
NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
|
|
G
|
Sfrp1
|
secreted frizzled-related protein 1
|
located_in
|
ISO
|
(PMID:10347172), (PMID:9192640)
|
RGD |
PMID:9192640 PMID:10347172 |
|
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
|
|
G
|
Sfrp2
|
secreted frizzled-related protein 2
|
located_in
|
ISO
|
(PMID:14709558)
|
RGD |
PMID:14709558 |
|
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
|
|
G
|
Snorc
|
secondary ossification center associated regulator of chondrocyte maturation
|
located_in
|
ISO
|
(PMID:28323137)
|
RGD |
PMID:28323137 |
|
NCBI chr 9:88,140,510...88,145,527
Ensembl chr 9:88,140,419...88,145,891
|
|
G
|
Sod3
|
superoxide dismutase 3
|
located_in
|
IDA ISO
|
(PMID:15528465) (PMID:9699963)
|
RGD |
PMID:9699963 PMID:15528465 PMID:16372329 |
RGD:1581086 |
NCBI chr14:58,610,104...58,615,845
Ensembl chr14:58,609,958...58,615,990
|
|
G
|
Ssc5d
|
scavenger receptor cysteine rich family member with 5 domains
|
located_in
|
ISO
|
(PMID:21217009)
|
RGD |
PMID:21217009 |
|
NCBI chr 1:68,891,942...68,910,462
Ensembl chr 1:68,891,949...68,909,743
|
|
G
|
Tgfb1
|
transforming growth factor, beta 1
|
|
IDA
|
|
RGD |
PMID:24224514 |
RGD:11073670 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
|
|
G
|
Tgfb2
|
transforming growth factor, beta 2
|
located_in
|
ISO
|
(PMID:18049952)
|
RGD |
PMID:18049952 |
|
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
|
|
G
|
Tgfb3
|
transforming growth factor, beta 3
|
located_in
|
ISO
|
(PMID:18049952)
|
RGD |
PMID:18049952 |
|
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
|
|
G
|
Tgfbr3
|
transforming growth factor beta receptor 3
|
located_in
|
TAS
|
PMID:1333192
|
BHF-UCL |
PMID:1333192 |
RGD:8554613 |
NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
|
|
G
|
Tgm4
|
transglutaminase 4
|
located_in is_active_in
|
ISO IBA
|
(PMID:20596668) GO_REF:0000033
|
RGD GO_Central |
PMID:20596668 |
GO_REF:0000033 |
NCBI chr 8:122,689,429...122,726,463
Ensembl chr 8:122,689,429...122,726,463
|
|
G
|
Thbs1
|
thrombospondin 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
|
|
G
|
Thbs2
|
thrombospondin 2
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 1:55,670,394...55,699,789
Ensembl chr 1:55,670,394...55,699,789
|
|
G
|
Thbs3
|
thrombospondin 3
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 2:174,621,788...174,633,594
Ensembl chr 2:174,621,812...174,633,594
|
|
G
|
Thbs4
|
thrombospondin 4
|
located_in is_active_in
|
ISS ISO IBA
|
GO_REF:0000024 (PMID:22362893) GO_REF:0000033
|
UniProt RGD GO_Central |
PMID:22362893 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 2:23,983,158...24,025,289
Ensembl chr 2:23,983,158...24,026,313
|
|
G
|
Tnc
|
tenascin C
|
located_in
|
ISO
|
(PMID:23658023)
|
RGD |
PMID:23658023 |
|
NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
|
|
G
|
Tnn
|
tenascin N
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:14709716)
|
GO_Central RGD |
PMID:14709716 |
GO_REF:0000033 |
NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156
|
|
G
|
Tnr
|
tenascin R
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:8244531)
|
GO_Central RGD |
PMID:8244531 |
GO_REF:0000033 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
|
|
G
|
Tnxb
|
tenascin XB
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
|
|
G
|
Vcan
|
versican
|
|
IDA
|
|
RGD |
PMID:12586779 |
RGD:1299255 |
NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637
|
|
G
|
Vtn
|
vitronectin
|
is_active_in located_in
|
IDA IBA ISO
|
GO_REF:0000033 (PMID:1632457)
|
GO_Central RGD |
PMID:1632457 PMID:2426279 |
GO_REF:0000033, RGD:10003088 |
NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
|
|
G
|
Vwa1
|
von Willebrand factor A domain containing 1
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:166,377,451...166,382,784
Ensembl chr 5:166,377,455...166,382,637
|
|
G
|
Vwf
|
von Willebrand factor
|
is_active_in located_in
|
IDA IBA ISO
|
GO_REF:0000033 (PMID:6754744)
|
GO_Central RGD |
PMID:6754744 PMID:14762664 |
GO_REF:0000033, RGD:1599021 |
NCBI chr 4:158,360,152...158,491,539
Ensembl chr 4:158,360,152...158,491,539
|
|
G
|
Wnt2
|
Wnt family member 2
|
located_in
|
ISO
|
(PMID:15507471)
|
RGD |
PMID:15507471 |
|
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
|
|
G
|
Zg16
|
zymogen granule protein 16
|
located_in
|
ISO ISS
|
(PMID:17307141) GO_REF:0000024
|
RGD UniProt |
PMID:17307141 |
GO_REF:0000024 |
NCBI chr 1:181,657,722...181,660,079
Ensembl chr 1:181,657,722...181,660,079
|
|
G
|
Zp1
|
zona pellucida glycoprotein 1
|
is_active_in located_in
|
IBA ISO
|
GO_REF:0000033 (PMID:11906903)
|
GO_Central RGD |
PMID:11906903 |
GO_REF:0000033 |
NCBI chr 1:207,560,881...207,567,261
Ensembl chr 1:207,560,881...207,567,261
|
|
G
|
Zp2
|
zona pellucida glycoprotein 2
|
located_in is_active_in
|
ISS ISO IBA
|
GO_REF:0000024 (PMID:11906903) GO_REF:0000033
|
UniProt RGD GO_Central |
PMID:11906903 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 1:174,513,507...174,525,288
Ensembl chr 1:174,513,511...174,525,288
|
|
G
|
Zp3
|
zona pellucida glycoprotein 3
|
located_in
|
ISO ISS
|
(PMID:19246320) (PMID:11906903), (PMID:19052627) GO_REF:0000024
|
RGD UniProt |
PMID:11906903 PMID:19052627 PMID:19246320 |
GO_REF:0000024 |
NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513
|
|
G
|
Zp4
|
zona pellucida glycoprotein 4
|
is_active_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr17:59,005,649...59,012,202
Ensembl chr17:59,005,649...59,012,202
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Rbp3
|
retinol binding protein 3
|
located_in is_active_in
|
ISO IBA
|
(PMID:21935947) GO_REF:0000033
|
RGD GO_Central |
PMID:21935947 |
GO_REF:0000033 |
NCBI chr16:9,267,538...9,276,006
Ensembl chr16:9,267,538...9,276,006
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Zp1
|
zona pellucida glycoprotein 1
|
located_in is_active_in
|
ISO IEA IBA ISS
|
(PMID:29895852) GO_REF:0000107 GO_REF:0000033 GO_REF:0000044 GO_REF:0000024
|
RGD Ensembl GO_Central UniProt |
PMID:29895852 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 |
NCBI chr 1:207,560,881...207,567,261
Ensembl chr 1:207,560,881...207,567,261
|
|
G
|
Zp2
|
zona pellucida glycoprotein 2
|
located_in is_active_in
|
ISO IBA IEA ISS
|
(PMID:29895852) GO_REF:0000033 GO_REF:0000044 GO_REF:0000024
|
RGD GO_Central UniProt |
PMID:29895852 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 |
NCBI chr 1:174,513,507...174,525,288
Ensembl chr 1:174,513,511...174,525,288
|
|
G
|
Zp3
|
zona pellucida glycoprotein 3
|
located_in
|
ISO IEA ISS
|
(PMID:29895852) GO_REF:0000104 GO_REF:0000044 GO_REF:0000024
|
RGD UniProt |
PMID:29895852 |
GO_REF:0000024 GO_REF:0000044 GO_REF:0000104 |
NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513
|
|
G
|
Zp4
|
zona pellucida glycoprotein 4
|
located_in is_active_in
|
ISO IEA IBA ISS
|
(PMID:29895852) GO_REF:0000107 GO_REF:0000033 GO_REF:0000044 GO_REF:0000024
|
RGD Ensembl GO_Central UniProt |
PMID:29895852 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 |
NCBI chr17:59,005,649...59,012,202
Ensembl chr17:59,005,649...59,012,202
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Efemp2
|
EGF containing fibulin extracellular matrix protein 2
|
located_in
|
ISO IEA
|
(PMID:27339457) GO_REF:0000107 (PMID:16478991)
|
RGD Ensembl |
PMID:16478991 PMID:27339457 |
GO_REF:0000107 |
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
|
|
G
|
Eln
|
elastin
|
located_in
|
ISO IEA
|
(PMID:10424889), (PMID:7534784) (PMID:17099216) GO_REF:0000107
|
RGD Ensembl |
PMID:7534784 PMID:10424889 PMID:17099216 |
GO_REF:0000107 |
NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
|
|
G
|
Fbln1
|
fibulin 1
|
located_in
|
ISO IEA
|
(PMID:7534784) GO_REF:0000107
|
RGD Ensembl |
PMID:7534784 |
GO_REF:0000107 |
NCBI chr 7:116,310,582...116,390,075
Ensembl chr 7:116,310,582...116,390,075
|
|
G
|
Fbln5
|
fibulin 5
|
located_in
|
ISO IEA
|
(PMID:11805834) GO_REF:0000107
|
RGD Ensembl |
PMID:11805834 |
GO_REF:0000107 |
NCBI chr 6:120,899,219...120,977,829
Ensembl chr 6:120,899,224...120,977,755
|
|
G
|
Mfap4
|
microfibril associated protein 4
|
located_in
|
ISO IEA
|
(PMID:10424889) GO_REF:0000107
|
RGD Ensembl |
PMID:10424889 |
GO_REF:0000107 |
NCBI chr10:46,167,158...46,170,176
Ensembl chr10:46,167,217...46,170,155
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Emilin1
|
elastin microfibril interfacer 1
|
part_of
|
ISO IEA
|
(PMID:10821830), (PMID:18463100) GO_REF:0000107
|
RGD Ensembl |
PMID:10821830 PMID:18463100 |
GO_REF:0000107 |
NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lama5
|
laminin subunit alpha 5
|
is_active_in
|
ISO IEA
|
(PMID:29091766) GO_REF:0000107
|
RGD Ensembl |
PMID:29091766 |
GO_REF:0000107 |
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
|
|
G
|
Mmp9
|
matrix metallopeptidase 9
|
is_active_in
|
IDA
|
PMID:18332222
|
SynGO |
PMID:18332222 |
RGD:405650358 |
NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
|
|
G
|
Sparcl1
|
SPARC like 1
|
is_active_in
|
IDA
|
PMID:17151913
|
SynGO |
PMID:17151913 |
RGD:13702411 |
NCBI chr14:5,632,816...5,663,866
Ensembl chr14:5,632,569...5,663,865
|
|
G
|
Tnc
|
tenascin C
|
is_active_in
|
IDA
|
PMID:21734302
|
SynGO |
PMID:21734302 |
RGD:155230724 |
NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Col27a1
|
collagen type XXVII alpha 1 chain
|
part_of
|
IEA ISO
|
GO_REF:0000107 (PMID:17331945)
|
Ensembl RGD |
PMID:17331945 |
GO_REF:0000107 |
NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174
|
|
G
|
Lum
|
lumican
|
part_of
|
ISO IEA
|
(PMID:10734230) GO_REF:0000107
|
RGD Ensembl |
PMID:10734230 |
GO_REF:0000107 |
NCBI chr 7:32,358,990...32,365,794
Ensembl chr 7:32,358,614...32,365,793
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Impg1
|
interphotoreceptor matrix proteoglycan 1
|
located_in
|
IEA ISO
|
GO_REF:0000044 GO_REF:0000107 (PMID:32265257)
|
UniProt Ensembl RGD |
PMID:32265257 |
GO_REF:0000044 GO_REF:0000107 |
NCBI chr 8:81,243,624...81,389,722
Ensembl chr 8:81,243,624...81,389,722
|
|
G
|
Impg2
|
interphotoreceptor matrix proteoglycan 2
|
located_in
|
IEA ISO
|
GO_REF:0000044 (PMID:32265257)
|
UniProt RGD |
PMID:32265257 |
GO_REF:0000044 |
NCBI chr11:44,318,836...44,418,382
Ensembl chr11:44,318,836...44,418,382
|
|
G
|
Rbp3
|
retinol binding protein 3
|
|
IDA
|
|
RGD |
PMID:8282025 |
RGD:6893658 |
NCBI chr16:9,267,538...9,276,006
Ensembl chr16:9,267,538...9,276,006
|
|
G
|
Rtbdn
|
retbindin
|
located_in
|
ISO IEA
|
(PMID:25542898) GO_REF:0000107
|
RGD Ensembl |
PMID:25542898 |
GO_REF:0000107 |
NCBI chr19:23,197,506...23,205,544
Ensembl chr19:23,197,506...23,204,438
|
|
G
|
Vcan
|
versican
|
located_in
|
IEA
|
GO_REF:0000044
|
UniProt |
|
GO_REF:0000044 |
NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Abi3bp
|
ABI family member 3 binding protein
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
|
|
G
|
Adamtsl4
|
ADAMTS-like 4
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr 2:183,235,634...183,247,091
Ensembl chr 2:183,235,646...183,246,848
|
|
G
|
C20h6orf15
|
similar to human chromosome 6 open reading frame 15
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr20:3,172,330...3,173,886
Ensembl chr20:3,172,330...3,173,886
|
|
G
|
Ccdc80
|
coiled-coil domain containing 80
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr11:55,685,165...55,718,827
Ensembl chr11:55,685,872...55,719,137
|
|
G
|
Col14a1
|
collagen type XIV alpha 1 chain
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:22906538)
|
GO_Central Ensembl RGD |
PMID:22906538 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 7:86,722,093...86,937,215
Ensembl chr 7:86,722,094...86,937,214
|
|
G
|
Ecm2
|
extracellular matrix protein 2
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr17:15,120,194...15,152,536
Ensembl chr17:15,120,196...15,152,516
|
|
G
|
Egflam
|
EGF-like, fibronectin type III and laminin G domains
|
located_in
|
IEA ISO
|
GO_REF:0000107 (PMID:18757743)
|
Ensembl RGD |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr 2:56,301,945...56,476,665
Ensembl chr 2:56,302,566...56,476,298
|
|
G
|
Igf1
|
insulin-like growth factor 1
|
|
IDA
|
|
RGD |
PMID:15544842 |
RGD:1580475 |
NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296
|
|
G
|
Kazald1
|
Kazal-type serine peptidase inhibitor domain 1
|
located_in is_active_in
|
ISO IEA IBA
|
(PMID:18757743) GO_REF:0000107 GO_REF:0000033
|
RGD Ensembl GO_Central |
PMID:18757743 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:243,939,596...243,943,060
Ensembl chr 1:243,939,647...243,943,059
|
|
G
|
Mamdc2
|
MAM domain containing 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr 1:220,863,959...221,016,493
Ensembl chr 1:220,863,976...221,016,354
|
|
G
|
Nav2
|
neuron navigator 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr 1:98,957,629...99,322,339
Ensembl chr 1:98,663,759...99,322,337
|
|
G
|
Nepn
|
nephrocan
|
located_in
|
IEA
|
GO_REF:0000107
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr20:31,786,607...31,799,458
Ensembl chr20:31,783,526...31,799,446
|
|
G
|
Smoc2
|
SPARC related modular calcium binding 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693
|
|
G
|
Tnc
|
tenascin C
|
located_in
|
ISO IEA
|
(PMID:11767049) GO_REF:0000107
|
RGD Ensembl |
PMID:11767049 |
GO_REF:0000107 |
NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
|
|
G
|
Vit
|
vitrin
|
is_active_in located_in
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:18757743)
|
GO_Central Ensembl RGD |
PMID:18757743 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 6:16,445,966...16,565,644
Ensembl chr 6:16,445,955...16,565,665
|
|
G
|
Vwa1
|
von Willebrand factor A domain containing 1
|
located_in
|
ISO IEA
|
(PMID:18757743) GO_REF:0000107
|
RGD Ensembl |
PMID:18757743 |
GO_REF:0000107 |
NCBI chr 5:166,377,451...166,382,784
Ensembl chr 5:166,377,455...166,382,637
|
|
G
|
Vwc2
|
von Willebrand factor C domain containing 2
|
located_in
|
ISO
|
(PMID:18757743)
|
RGD |
PMID:18757743 |
|
NCBI chr14:85,683,670...85,825,068
Ensembl chr14:85,684,414...85,818,524
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lama1
|
laminin subunit alpha 1
|
part_of
|
ISO IEA
|
(PMID:8034675) GO_REF:0000107
|
RGD Ensembl |
PMID:8034675 |
GO_REF:0000107 |
NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
|
|
G
|
Lamb1
|
laminin subunit beta 1
|
part_of
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:8034675)
|
GO_Central Ensembl RGD |
PMID:8034675 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
|
|
G
|
Lamb2
|
laminin subunit beta 2
|
part_of
|
IBA IEA ISO
|
GO_REF:0000033 GO_REF:0000107 (PMID:8034675)
|
GO_Central Ensembl RGD |
PMID:8034675 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
|
|
G
|
Lamb3
|
laminin subunit beta 3
|
part_of
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405
|
|
G
|
Megf9
|
multiple EGF-like-domains 9
|
part_of
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 5:83,993,565...84,105,622
Ensembl chr 5:83,993,565...84,105,622
|
|
G
|
Ntn4
|
netrin 4
|
part_of
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr 7:28,186,611...28,300,390
Ensembl chr 7:28,186,611...28,300,390
|
|
G
|
Pmp22
|
peripheral myelin protein 22
|
part_of
|
ISO
|
(PMID:16436605)
|
RGD |
PMID:16436605 |
|
NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lama1
|
laminin subunit alpha 1
|
part_of
|
ISO IEA
|
UniProtKB:P07942 (PMID:10964500), (PMID:8601594) GO_REF:0000107 (PMID:17517882), (PMID:9264260)
|
RGD Ensembl |
PMID:8601594 PMID:9264260 PMID:10964500 PMID:17517882 |
GO_REF:0000107 |
NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
|
|
G
|
Lamb1
|
laminin subunit beta 1
|
part_of
|
ISO IEA
|
UniProtKB:P25391 (PMID:10964500), (PMID:16289578) GO_REF:0000107 (PMID:9264260)
|
RGD Ensembl |
PMID:9264260 PMID:10964500 PMID:16289578 |
GO_REF:0000107 |
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
|
|
G
|
Lamc1
|
laminin subunit gamma 1
|
|
IDA
|
|
RGD |
PMID:8648916 |
RGD:633159 |
NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lama5
|
laminin subunit alpha 5
|
part_of
|
ISO IEA
|
(PMID:10964500) GO_REF:0000107 PR:P02468|PR:P02469 (PMID:9299121)
|
RGD Ensembl |
PMID:9299121 PMID:10964500 |
GO_REF:0000107 |
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
|
|
G
|
Lamb1
|
laminin subunit beta 1
|
part_of
|
ISO IEA
|
(PMID:10964500), (PMID:16289578) GO_REF:0000107 PR:P02468|PR:Q61001 (PMID:9299121)
|
RGD Ensembl |
PMID:9299121 PMID:10964500 PMID:16289578 |
GO_REF:0000107 |
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
|
|
G
|
Lamc1
|
laminin subunit gamma 1
|
part_of
|
ISO
|
PR:P02469|PR:Q61001 (PMID:9299121)
|
RGD |
PMID:9299121 |
|
NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lamb1
|
laminin subunit beta 1
|
part_of
|
ISO IEA
|
(PMID:16289578) GO_REF:0000107
|
RGD Ensembl |
PMID:16289578 |
GO_REF:0000107 |
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
|
|
G
|
Lamc2
|
laminin subunit gamma 2
|
|
IDA
|
|
RGD |
PMID:9417868 |
RGD:633095 |
NCBI chr13:65,284,664...65,344,164
Ensembl chr13:65,284,664...65,344,200
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lama1
|
laminin subunit alpha 1
|
part_of
|
ISO IEA
|
UniProtKB:P55268 (PMID:10964500) GO_REF:0000107
|
RGD Ensembl |
PMID:10964500 |
GO_REF:0000107 |
NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
|
|
G
|
Lama3
|
laminin subunit alpha 3
|
|
IDA
|
|
RGD |
PMID:8923212 |
RGD:633107 |
NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353
|
|
G
|
Lamb2
|
laminin subunit beta 2
|
part_of
|
IEA ISO
|
GO_REF:0000107 (PMID:20566382) UniProtKB:P25391 (PMID:10964500)
|
Ensembl RGD |
PMID:10964500 PMID:20566382 |
GO_REF:0000107 |
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lama3
|
laminin subunit alpha 3
|
part_of
|
ISO IEA
|
(PMID:9264260) GO_REF:0000107
|
RGD Ensembl |
PMID:9264260 |
GO_REF:0000107 |
NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353
|
|
G
|
Lama5
|
laminin subunit alpha 5
|
|
IDA
|
|
RGD |
PMID:9417868 |
RGD:633095 |
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
|
|
G
|
Lamb3
|
laminin subunit beta 3
|
part_of
|
ISO
|
(PMID:9264260)
|
RGD |
PMID:9264260 |
|
NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405
|
|
G
|
Lamc2
|
laminin subunit gamma 2
|
part_of
|
ISO
|
(PMID:9264260)
|
RGD |
PMID:9264260 |
|
NCBI chr13:65,284,664...65,344,164
Ensembl chr13:65,284,664...65,344,200
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lamb1
|
laminin subunit beta 1
|
part_of
|
ISO IEA
|
(PMID:16289578) GO_REF:0000107
|
RGD Ensembl |
PMID:16289578 |
GO_REF:0000107 |
NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Matn2
|
matrilin 2
|
part_of
|
ISO IEA
|
(PMID:10224097) GO_REF:0000107
|
RGD Ensembl |
PMID:10224097 |
GO_REF:0000107 |
NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113
|
|
G
|
Matn3
|
matrilin 3
|
part_of
|
ISO IEA
|
(PMID:10660556) GO_REF:0000107
|
RGD Ensembl |
PMID:10660556 |
GO_REF:0000107 |
NCBI chr 6:31,748,517...31,768,564
Ensembl chr 6:31,748,474...31,768,101
|
|
G
|
Matn4
|
matrilin 4
|
part_of
|
ISO
|
(PMID:11279097)
|
RGD |
PMID:11279097 |
|
NCBI chr 3:153,120,605...153,135,628
Ensembl chr 3:153,120,632...153,135,865
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Adamts10
|
ADAM metallopeptidase with thrombospondin type 1 motif, 10
|
located_in
|
ISO
|
(PMID:21402694)
|
RGD |
PMID:21402694 |
|
NCBI chr 7:14,331,659...14,361,620
Ensembl chr 7:14,331,745...14,361,620
|
|
G
|
Adamtsl5
|
ADAMTS-like 5
|
located_in
|
ISO
|
(PMID:23010571)
|
RGD |
PMID:23010571 |
|
NCBI chr 7:9,362,623...9,371,248
Ensembl chr 7:9,363,237...9,370,285
|
|
G
|
Efemp2
|
EGF containing fibulin extracellular matrix protein 2
|
located_in
|
ISO IEA
|
(PMID:17324935) GO_REF:0000107
|
RGD Ensembl |
PMID:17324935 |
GO_REF:0000107 |
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
|
|
G
|
Fbn1
|
fibrillin 1
|
located_in
|
ISO IEA
|
(PMID:10424889), (PMID:12429738), (PMID:1860873), (PMID:22355679), (PMID:3536967), (PMID:7534784), (PMID:8120105) GO_REF:0000107 GO_REF:0000117 (PMID:26405179)
|
RGD Ensembl UniProt |
PMID:1860873 PMID:3536967 PMID:7534784 PMID:8120105 PMID:10424889 PMID:12429738 PMID:22355679 PMID:26405179 More...
|
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
|
|
G
|
Fbn2
|
fibrillin 2
|
located_in
|
ISO IEA
|
(PMID:8120105) GO_REF:0000107 GO_REF:0000117 (PMID:24348270), (PMID:26405179)
|
RGD Ensembl UniProt |
PMID:8120105 PMID:24348270 PMID:26405179 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr18:51,499,670...51,703,976
Ensembl chr18:51,499,737...51,703,976
|
|
G
|
Ltbp1
|
latent transforming growth factor beta binding protein 1
|
located_in
|
ISO IEA ISS
|
(PMID:12429738) (PMID:19349279) GO_REF:0000107 GO_REF:0000024
|
RGD Ensembl UniProt |
PMID:12429738 PMID:19349279 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349
|
|
G
|
Ltbp4
|
latent transforming growth factor beta binding protein 4
|
located_in
|
ISO IEA
|
(PMID:19349279) GO_REF:0000107
|
RGD Ensembl |
PMID:19349279 |
GO_REF:0000107 |
NCBI chr 1:82,600,136...82,634,346
Ensembl chr 1:82,600,136...82,632,178
|
|
G
|
Mfap1a
|
microfibrillar-associated protein 1A
|
located_in
|
ISO
|
(PMID:1374398)
|
RGD |
PMID:1374398 |
|
NCBI chr 3:108,440,163...108,456,744
Ensembl chr 3:108,438,845...108,456,750
|
|
G
|
Mfap2
|
microfibril associated protein 2
|
part_of located_in is_active_in
|
ISO IEA IBA
|
(PMID:24353434) GO_REF:0000002 (PMID:26405179) GO_REF:0000033
|
RGD InterPro GO_Central |
PMID:24353434 PMID:26405179 |
GO_REF:0000002 GO_REF:0000033 |
NCBI chr 5:153,312,068...153,320,266
Ensembl chr 5:153,314,711...153,320,259
|
|
G
|
Mfap4
|
microfibril associated protein 4
|
located_in
|
ISO IEA
|
(PMID:22355679) GO_REF:0000107
|
RGD Ensembl |
PMID:22355679 |
GO_REF:0000107 |
NCBI chr10:46,167,158...46,170,176
Ensembl chr10:46,167,217...46,170,155
|
|
G
|
Mfap5
|
microfibril associated protein 5
|
is_active_in located_in
|
IBA IEA
|
GO_REF:0000033 GO_REF:0000002
|
GO_Central InterPro |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr 4:155,727,925...155,750,458
Ensembl chr 4:155,727,925...155,750,458
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G
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Thsd4
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thrombospondin type 1 domain containing 4
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located_in
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ISO IEA
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(PMID:32855533) GO_REF:0000107 (PMID:19940141)
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RGD Ensembl |
PMID:19940141 PMID:32855533 |
GO_REF:0000107 |
NCBI chr 8:60,384,636...60,984,419
Ensembl chr 8:60,386,875...61,024,995
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G
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Ttc27
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tetratricopeptide repeat domain 27
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located_in
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IEA
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GO_REF:0000107
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Ensembl |
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GO_REF:0000107 |
NCBI chr 6:20,558,756...20,702,126
Ensembl chr 6:20,558,756...20,702,115
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Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Mmrn1
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multimerin 1
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part_of
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ISO IEA
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(PMID:9454761) GO_REF:0000107
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RGD Ensembl |
PMID:9454761 |
GO_REF:0000107 |
NCBI chr 4:89,875,408...89,950,814
Ensembl chr 4:89,903,174...89,950,474
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Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Acan
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aggrecan
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is_active_in
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IDA IBA
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GO_REF:0000033
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GO_Central RGD |
PMID:18364019 |
GO_REF:0000033, RGD:2315810 |
NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627
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G
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Bcan
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brevican
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located_in is_active_in
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IDA ISO IBA IEA
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MMO:0000669 (PMID:14550776), (PMID:22121037) GO_REF:0000033 GO_REF:0000107
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RGD GO_Central Ensembl |
PMID:14550776 PMID:22121037 PMID:16644727 |
GO_REF:0000033 GO_REF:0000107, RGD:9589827 |
NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460
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G
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Hapln1
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hyaluronan and proteoglycan link protein 1
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is_active_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 2:20,631,640...20,696,388
Ensembl chr 2:20,631,640...20,693,777
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G
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Hapln2
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hyaluronan and proteoglycan link protein 2
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is_active_in
|
IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 2:173,488,909...173,496,824
Ensembl chr 2:173,491,160...173,496,588
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G
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Hapln3
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hyaluronan and proteoglycan link protein 3
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is_active_in
|
IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 1:133,046,465...133,064,665
Ensembl chr 1:133,046,467...133,080,177
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G
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Hapln4
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hyaluronan and proteoglycan link protein 4
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is_active_in located_in
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IBA ISO
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GO_REF:0000033 (PMID:14550776), (PMID:22121037)
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GO_Central RGD |
PMID:14550776 PMID:22121037 |
GO_REF:0000033 |
NCBI chr16:19,333,106...19,341,243
Ensembl chr16:19,333,106...19,341,243
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G
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Ncan
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neurocan
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is_active_in
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IDA IBA
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MMO:0000669,MMO:0000662 GO_REF:0000033
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GO_Central RGD |
PMID:16644727 |
GO_REF:0000033, RGD:9589827 |
NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436
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G
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Ptprz1
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protein tyrosine phosphatase, receptor type Z1
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located_in
|
IDA ISO IEA
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(PMID:10793198) GO_REF:0000107
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RGD Ensembl |
PMID:10793198 PMID:16644727 |
GO_REF:0000107, RGD:9589827 |
NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
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G
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Tnr
|
tenascin R
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located_in
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IEA ISO
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GO_REF:0000107 (PMID:10341229), (PMID:8244531)
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Ensembl RGD |
PMID:8244531 PMID:10341229 |
GO_REF:0000107 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
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G
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Vcan
|
versican
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is_active_in
|
IDA IBA
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MMO:0000669,MMO:0000662 GO_REF:0000033
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GO_Central RGD |
PMID:16644727 |
GO_REF:0000033, RGD:9589827 |
NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637
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Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Acan
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aggrecan
|
is_active_in
|
ISO IEA
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(PMID:27615741) GO_REF:0000107
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RGD Ensembl |
PMID:27615741 |
GO_REF:0000107 |
NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627
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G
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Bcan
|
brevican
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is_active_in
|
IDA
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PMID:16503162 PMID:10414531
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SynGO |
PMID:16503162 PMID:10414531 |
RGD:13702210, RGD:13702202 |
NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460
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G
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Ncan
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neurocan
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is_active_in
|
ISO
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(PMID:29670169), (PMID:30356641)
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RGD |
PMID:29670169 PMID:30356641 |
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NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436
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G
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Slit2
|
slit guidance ligand 2
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is_active_in
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IMP EXP NAS IDA
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PMID:34686348
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SynGO |
PMID:34686348 PMID:34686348 PMID:34686348 PMID:34686348 |
RGD:405650259, RGD:405650259, RGD:405650259, RGD:405650259 |
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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G
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Tnc
|
tenascin C
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is_active_in
|
IBA ISO IEA
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GO_REF:0000033 (PMID:16452087) GO_REF:0000107
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GO_Central RGD Ensembl |
PMID:16452087 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
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G
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Tnr
|
tenascin R
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is_active_in
|
IDA
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PMID:11598921
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SynGO |
PMID:11598921 |
RGD:13702357 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
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Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Tnc
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tenascin C
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part_of
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ISO IEA
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(PMID:14709716) GO_REF:0000107
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RGD Ensembl |
PMID:14709716 |
GO_REF:0000107 |
NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
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G
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Tnn
|
tenascin N
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part_of
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ISO IEA
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(PMID:17909022) GO_REF:0000107 (PMID:14709716)
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RGD Ensembl |
PMID:14709716 PMID:17909022 |
GO_REF:0000107 |
NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156
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G
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Tnr
|
tenascin R
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part_of
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IEA ISO
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GO_REF:0000107 (PMID:2477380)
|
Ensembl RGD |
PMID:2477380 |
GO_REF:0000107 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
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Term paths to the root
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