Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Thsd4 (thrombospondin type 1 domain containing 4) Rattus norvegicus
Analyze
Symbol: Thsd4
Name: thrombospondin type 1 domain containing 4
Description: Predicted to be involved in elastic fiber assembly. Predicted to localize to the microfibril. Orthologous to human THSD4 (thrombospondin type 1 domain containing 4); INTERACTS WITH bisphenol A; rotenone; valproic acid.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC315728; LOW QUALITY PROTEIN: thrombospondin type-1 domain-containing protein 4; RGD1566296; similar to RIKEN cDNA B230114P05; thrombospondin type-1 domain-containing protein 4; thrombospondin, type I, domain containing 4
Orthologs:
Homo sapiens (human) : THSD4 (thrombospondin type 1 domain containing 4)  HGNC  Alliance
Mus musculus (house mouse) : Thsd4 (thrombospondin, type I, domain containing 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Thsd4 (thrombospondin type 1 domain containing 4)
Pan paniscus (bonobo/pygmy chimpanzee) : THSD4 (thrombospondin type 1 domain containing 4)
Canis lupus familiaris (dog) : LOC487628 (thrombospondin type-1 domain-containing protein 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Thsd4 (thrombospondin type 1 domain containing 4)
Sus scrofa (pig) : THSD4 (thrombospondin type 1 domain containing 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0864,811,940 - 65,413,498 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0864,569,306 - 65,166,353 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4863,925,951 - 64,415,899 (-)NCBIRGSC3.4rn4RGSC3.4
Celera859,826,443 - 60,422,430 (-)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Thsd4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1566296
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.