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Gene: Scara3 (scavenger receptor class A, member 3) Rattus norvegicus
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Symbol: Scara3
Name: scavenger receptor class A, member 3
Description: Predicted to have extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization. Predicted to localize to collagen type IX trimer; extracellular matrix; and extracellular space. Orthologous to human SCARA3 (scavenger receptor class A member 3); INTERACTS WITH 1-naphthyl isothiocyanate; 6-propyl-2-thiouracil; amphetamine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC364405; scavenger receptor class A member 3
Orthologs:
Homo sapiens (human) : SCARA3 (scavenger receptor class A member 3)  HGNC  Alliance
Mus musculus (house mouse) : Scara3 (scavenger receptor class A, member 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scara3 (scavenger receptor class A member 3)
Pan paniscus (bonobo/pygmy chimpanzee) : SCARA3 (scavenger receptor class A member 3)
Canis lupus familiaris (dog) : SCARA3 (scavenger receptor class A member 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scara3 (scavenger receptor class A member 3)
Sus scrofa (pig) : SCARA3 (scavenger receptor class A member 3)
Chlorocebus sabaeus (African green monkey) : SCARA3 (scavenger receptor class A member 3)
Heterocephalus glaber (naked mole-rat) : Scara3 (scavenger receptor class A member 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01542,605,505 - 42,638,409 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1542,605,473 - 42,638,392 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01548,953,960 - 48,986,864 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41545,344,539 - 45,377,576 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11545,360,319 - 45,393,691 (-)NCBI
Celera1539,811,744 - 39,844,508 (-)NCBICelera
Cytogenetic Map15p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Scara3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309269
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.