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Gene: Nid1 (nidogen 1) Rattus norvegicus
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Symbol: Nid1
Name: nidogen 1
Description: Predicted to have collagen binding activity; laminin-1 binding activity; and proteoglycan binding activity. Predicted to be involved in cell-matrix adhesion; glomerular basement membrane development; and positive regulation of cell-substrate adhesion. Predicted to localize to the basement membrane and cell periphery. Orthologous to human NID1 (nidogen 1); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,3-dinitrobenzene; 1-naphthyl isothiocyanate.
Type: protein-coding
RefSeq Status: MODEL
Also known as: entactin; Nid; NID-1; nidogen (entactin); nidogen-1
Orthologs:
Homo sapiens (human) : NID1 (nidogen 1)  HGNC  Alliance
Mus musculus (house mouse) : Nid1 (nidogen 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Nid1 (nidogen 1)
Pan paniscus (bonobo/pygmy chimpanzee) : NID1 (nidogen 1)
Canis lupus familiaris (dog) : NID1 (nidogen 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Nid1 (nidogen 1)
Sus scrofa (pig) : NID1 (nidogen 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01790,553,161 - 90,627,133 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1790,553,394 - 90,627,101 (-)Ensembl
Rnor_5.01792,213,995 - 92,287,999 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41766,857,529 - 66,930,273 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11766,907,493 - 66,916,781 (-)NCBI
Celera1785,451,906 - 85,525,217 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Nid1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3178
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.