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ONTOLOGY REPORT - ANNOTATIONS

Term:collagen-containing extracellular matrix
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Accession:GO:0062023 term browser browse the term
Definition:An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.
Synonyms:exact_synonym: collagen-containing ECM
 only_in_taxon: NCBITaxon:33208 ! Metazoa


show annotations for term's descendants           Sort by:
collagen-containing extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07044388.2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr20:4,026,463...4,085,578 JBrowse link
G Abi3bp ABI family member 3 binding protein is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 IDA RGD PMID:15777654 RGD:9681749 NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103 		JBrowse link
G Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 located_in ISO (PMID:21402694) RGD PMID:21402694 NCBI chr 7:14,331,659...14,361,620
Ensembl chr 7:14,331,745...14,361,620 		JBrowse link
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:29,307,864...29,331,249
Ensembl chr 8:29,307,865...29,331,249 		JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:34,920,992...35,126,465
Ensembl chr10:34,921,049...35,123,821 		JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205 		JBrowse link
G Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:29,349,078...29,368,413
Ensembl chr 8:29,349,114...29,368,404 		JBrowse link
G Agrn agrin located_in ISO (PMID:17628813) RGD PMID:17628813 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003 		JBrowse link
G Ahsg alpha-2-HS-glycoprotein IDA RGD PMID:7794128 RGD:1626075 NCBI chr11:78,121,388...78,127,998
Ensembl chr11:78,117,918...78,145,999 		JBrowse link
G Amelx amelogenin, X-linked located_in
is_active_in		 ISO
IEA
IBA		 (PMID:2509010)
GO_REF:0000002
GO_REF:0000033		 RGD
InterPro
GO_Central		 PMID:2509010 GO_REF:0000002 GO_REF:0000033 NCBI chr  X:25,076,362...25,087,660
Ensembl chr  X:25,076,362...25,087,660 		JBrowse link
G Angpt1 angiopoietin 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067 		JBrowse link
G Angpt2 angiopoietin 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:71,088,364...71,138,805
Ensembl chr16:71,088,364...71,138,804 		JBrowse link
G Angpt4 angiopoietin 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:140,420,389...140,454,213
Ensembl chr 3:140,420,389...140,453,583 		JBrowse link
G Angptl1 angiopoietin-like 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:68,963,186...68,981,649
Ensembl chr13:68,962,991...68,992,570 		JBrowse link
G Angptl2 angiopoietin-like 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:16,517,185...16,547,024
Ensembl chr 3:16,517,420...16,548,178 		JBrowse link
G Angptl3 angiopoietin-like 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:113,703,007...113,710,044
Ensembl chr 5:113,703,012...113,709,957 		JBrowse link
G Angptl4 angiopoietin-like 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:14,550,288...14,557,797
Ensembl chr 7:14,550,311...14,556,519 		JBrowse link
G Angptl6 angiopoietin-like 6 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,413,617...19,419,925
Ensembl chr 8:19,413,619...19,419,925 		JBrowse link
G Angptl7 angiopoietin like 7 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:158,932,096...158,937,281
Ensembl chr 5:158,932,794...158,937,324 		JBrowse link
G Bglap bone gamma-carboxyglutamate protein located_in ISO (PMID:8101026), (PMID:8218200) RGD PMID:8101026 PMID:8218200 NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495 		JBrowse link
G Bmp7 bone morphogenetic protein 7 IDA RGD PMID:9626398 RGD:2289041 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Calr calreticulin IDA RGD PMID:12782144 RGD:2326184 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Ccn3 cellular communication network factor 3 IDA RGD PMID:19286457 RGD:2306292 NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019 		JBrowse link
G Chadl chondroadherin-like located_in ISO (PMID:25451920) RGD PMID:25451920 NCBI chr 7:113,205,323...113,218,678
Ensembl chr 7:113,210,748...113,217,272 		JBrowse link
G Cilp cartilage intermediate layer protein located_in
is_active_in		 ISO
IBA		 (PMID:9722583)
GO_REF:0000033		 RGD
GO_Central		 PMID:9722583 GO_REF:0000033 NCBI chr 8:65,777,281...65,792,251
Ensembl chr 8:65,777,281...65,792,251 		JBrowse link
G Clu clusterin located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315 		JBrowse link
G Coch cochlin located_in
is_active_in		 ISO
IBA		 (PMID:22610276)
GO_REF:0000033		 RGD
GO_Central		 PMID:22610276 GO_REF:0000033 NCBI chr 6:69,031,139...69,045,124
Ensembl chr 6:69,031,167...69,045,109 		JBrowse link
G Col10a1 collagen type X alpha 1 chain located_in
is_active_in		 IDA
ISO
IBA		 (PMID:17876790)
GO_REF:0000033		 RGD
GO_Central		 PMID:17876790 PMID:7649371 GO_REF:0000033, RGD:1298775 NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:17062562 GO_REF:0000033, RGD:1600882 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,786,932...4,816,598
Ensembl chr20:4,786,929...4,815,985 		JBrowse link
G Col12a1 collagen type XII alpha 1 chain is_active_in
located_in		 IBA
IEA		 GO_REF:0000033
GO_REF:0000117		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000117 NCBI chr 8:80,547,592...80,665,665
Ensembl chr 8:80,547,593...80,665,686 		JBrowse link
G Col17a1 collagen type XVII alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:246,530,589...246,577,559
Ensembl chr 1:246,531,367...246,577,632 		JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593 		JBrowse link
G Col19a1 collagen type XIX alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:26,673,916...27,022,139
Ensembl chr 9:26,675,391...27,022,106 		JBrowse link
G Col1a1 collagen type I alpha 1 chain located_in
is_active_in		 ISO
IBA		 (PMID:34368841)
GO_REF:0000033		 RGD
GO_Central		 PMID:34368841 GO_REF:0000033 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col1a2 collagen type I alpha 2 chain located_in
is_active_in		 ISO
IBA		 (PMID:34368841)
GO_REF:0000033		 RGD
GO_Central		 PMID:34368841 GO_REF:0000033 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867 		JBrowse link
G Col23a1 collagen type XXIII alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:35,549,090...35,839,152
Ensembl chr10:35,549,113...35,836,314 		JBrowse link
G Col27a1 collagen type XXVII alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174 		JBrowse link
G Col28a1 collagen type XXVIII alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:36,069,980...36,223,128
Ensembl chr 4:36,069,970...36,223,220 		JBrowse link
G Col2a1 collagen type II alpha 1 chain is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:7649371 GO_REF:0000033, RGD:1298775 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Col3a1 collagen type III alpha 1 chain is_active_in
located_in		 IDA
IBA
ISO		 GO_REF:0000033
(PMID:14970208), (PMID:7487954)		 GO_Central
RGD		 PMID:7487954 PMID:14970208 PMID:20610530 GO_REF:0000033, RGD:7257557 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412 		JBrowse link
G Col4a2 collagen type IV alpha 2 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839 		JBrowse link
G Col4a3 collagen type IV alpha 3 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:83,875,849...84,004,955
Ensembl chr 9:83,875,561...84,001,895 		JBrowse link
G Col4a4 collagen type IV alpha 4 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876 		JBrowse link
G Col4a5 collagen type IV alpha 5 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:105,118,762...105,322,699
Ensembl chr  X:105,118,820...105,322,692 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:104,766,463...105,117,499
Ensembl chr  X:104,766,957...105,117,500 		JBrowse link
G Col5a1 collagen type V alpha 1 chain located_in
is_active_in		 ISO
IBA		 (PMID:14970208)
GO_REF:0000033		 RGD
GO_Central		 PMID:14970208 GO_REF:0000033 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588 		JBrowse link
G Col5a2 collagen type V alpha 2 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154 		JBrowse link
G Col5a3 collagen type V alpha 3 chain is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:15383532 GO_REF:0000033, RGD:5683638 NCBI chr 8:19,304,564...19,349,809
Ensembl chr 8:19,304,571...19,349,853 		JBrowse link
G Col6a2 collagen type VI alpha 2 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:12,021,676...12,049,425
Ensembl chr20:12,021,767...12,057,564 		JBrowse link
G Col6a5 collagen type VI alpha 5 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:106,483,806...106,584,114
Ensembl chr 8:106,483,799...106,584,113 		JBrowse link
G Col6a6 collagen type VI alpha 6 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:106,318,010...106,473,419
Ensembl chr 8:106,306,422...106,473,472 		JBrowse link
G Col8a1 collagen type VIII alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424 		JBrowse link
G Col8a2 collagen type VIII alpha 2 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:138,586,201...138,613,627
Ensembl chr 5:138,585,999...138,612,850 		JBrowse link
G Col9a2 collagen type IX alpha 2 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:134,607,616...134,624,678
Ensembl chr 5:134,607,616...134,624,677 		JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107 		JBrowse link
G Comp cartilage oligomeric matrix protein is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16778685 GO_REF:0000033, RGD:1600712 NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845 		JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 IDA RGD PMID:11121438 RGD:1599784 NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478 		JBrowse link
G Dspp dentin sialophosphoprotein IDA RGD PMID:16776771 RGD:1599799 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672 		JBrowse link
G Ecm1 extracellular matrix protein 1 located_in
is_active_in		 ISO
IBA
IEA		 (PMID:20870722)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:20870722 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671 		JBrowse link
G Eln elastin located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928 		JBrowse link
G Emid1 EMI domain containing 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:80,000,486...80,043,561
Ensembl chr14:80,000,486...80,043,620 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 located_in ISO (PMID:26462740) RGD PMID:26462740 NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698 		JBrowse link
G F2 coagulation factor II, thrombin is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:21191574 GO_REF:0000033, RGD:7387308 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486 		JBrowse link
G F3 coagulation factor III, tissue factor located_in ISO (PMID:2704749) RGD PMID:2704749 NCBI chr 2:209,827,061...209,838,666
Ensembl chr 2:209,826,959...209,838,668 		JBrowse link
G Fbln5 fibulin 5 located_in ISO
IEA
ISS		 (PMID:17035250)
(PMID:15528465)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15528465 PMID:17035250 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:120,899,219...120,977,829
Ensembl chr 6:120,899,224...120,977,755 		JBrowse link
G Fbn1 fibrillin 1 located_in IDA
ISO		 (PMID:17099216), (PMID:24039232) RGD PMID:17099216 PMID:24039232 PMID:15849235 RGD:1601147 NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889 		JBrowse link
G Fcna ficolin A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:8,445,904...8,449,128
Ensembl chr 3:8,445,907...8,449,105 		JBrowse link
G Fcnb ficolin B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:11,393,713...11,402,198
Ensembl chr 3:11,393,739...11,402,151 		JBrowse link
G Fgb fibrinogen beta chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:168,394,901...168,402,863
Ensembl chr 2:168,394,916...168,405,979 		JBrowse link
G Fgf10 fibroblast growth factor 10 located_in ISO (PMID:17959718) RGD PMID:17959718 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 located_in ISO (PMID:17959718) RGD PMID:17959718 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Fgg fibrinogen gamma chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:168,354,880...168,362,325
Ensembl chr 2:168,355,013...168,362,322 		JBrowse link
G Fgl1 fibrinogen-like 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:51,120,652...51,150,907
Ensembl chr16:51,120,694...51,151,093 		JBrowse link
G Fgl2 fibrinogen-like 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207 		JBrowse link
G Fibcd1 fibrinogen C domain containing 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:15,092,682...15,126,371
Ensembl chr 3:15,092,681...15,126,399 		JBrowse link
G Fmod fibromodulin IDA RGD PMID:12941075 RGD:2315082 NCBI chr13:45,493,517...45,504,134
Ensembl chr13:45,493,517...45,504,133 		JBrowse link
G Fn1 fibronectin 1 located_in ISO
IEA		 (PMID:16157329), (PMID:1632457)
(PMID:34368841)
GO_REF:0000117		 RGD
UniProt		 PMID:1632457 PMID:16157329 PMID:34368841 GO_REF:0000117 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:12,791,407...13,200,862
Ensembl chr14:12,793,599...13,200,726 		JBrowse link
G Frem1 Fras1 related extracellular matrix 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:97,321,266...97,469,523
Ensembl chr 5:97,322,538...97,469,543 		JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:137,602,784...137,740,785
Ensembl chr 2:137,602,784...137,740,785 		JBrowse link
G Frem3 FRAS1 related extracellular matrix 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:27,308,469...27,366,771
Ensembl chr19:27,308,469...27,366,771 		JBrowse link
G Gh1 growth hormone 1 IDA RGD PMID:9255605 RGD:12904880 NCBI chr10:91,228,102...91,230,079
Ensembl chr10:91,228,103...91,230,078 		JBrowse link
G Gpc1 glypican 1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:93,396,234...93,424,047
Ensembl chr 9:93,396,234...93,424,047 		JBrowse link
G Gpc2 glypican 2 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:17,277,875...17,284,297
Ensembl chr12:17,277,875...17,284,208 		JBrowse link
G Gpc3 glypican 3 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:131,868,986...132,236,824
Ensembl chr  X:131,868,990...132,236,798 		JBrowse link
G Gpc4 glypican 4 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:131,644,711...131,755,349
Ensembl chr  X:131,644,704...131,755,284 		JBrowse link
G Gpc5 glypican 5 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:92,207,275...93,644,054
Ensembl chr15:92,239,176...93,643,282 		JBrowse link
G Gpc6 glypican 6 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:94,030,218...95,027,883
Ensembl chr15:94,029,884...95,024,006 		JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IDA RGD PMID:15497505 RGD:2316936 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268 		JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 IDA RGD PMID:15928048 RGD:1624263 NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594 		JBrowse link
G Htra1 HtrA serine peptidase 1 is_active_in IDA
IBA		 dentin matrix
GO_REF:0000033		 GO_Central
RGD		 PMID:22595117 GO_REF:0000033, RGD:7394756 NCBI chr 1:185,497,815...185,547,380
Ensembl chr 1:185,497,735...185,547,379 		JBrowse link
G Igfbp7 insulin-like growth factor binding protein 7 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:30,737,414...30,797,317
Ensembl chr14:30,737,164...30,797,314 		JBrowse link
G Igfbpl1 insulin-like growth factor binding protein-like 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:60,076,428...60,091,833
Ensembl chr 5:60,076,429...60,091,833 		JBrowse link
G Lamb1 laminin subunit beta 1 IDA RGD PMID:15928048 RGD:1624263 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
G Lamc1 laminin subunit gamma 1 IDA RGD PMID:15928048 RGD:1624263 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492 		JBrowse link
G Lox lysyl oxidase is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477 		JBrowse link
G Loxl1 lysyl oxidase-like 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:58,691,763...58,716,365
Ensembl chr 8:58,692,593...58,716,356 		JBrowse link
G Loxl2 lysyl oxidase-like 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067 		JBrowse link
G Loxl3 lysyl oxidase-like 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466 		JBrowse link
G Loxl4 lysyl oxidase-like 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:241,396,183...241,416,385
Ensembl chr 1:241,397,983...241,416,322 		JBrowse link
G Lrrc15 leucine rich repeat containing 15 located_in IEA
ISO		 GO_REF:0000107
(PMID:16098915)		 Ensembl
RGD		 PMID:16098915 GO_REF:0000107 NCBI chr11:70,469,817...70,484,268
Ensembl chr11:70,469,804...70,484,267 		JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 located_in IDA
IEA
ISO		 GO_REF:0000107
(PMID:16157329)		 Ensembl
RGD		 PMID:16157329 PMID:9766531 GO_REF:0000107, RGD:10412061 NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349 		JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 located_in ISO (PMID:16157329) RGD PMID:16157329 NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975 		JBrowse link
G Ltbp4 latent transforming growth factor beta binding protein 4 located_in ISO (PMID:16157329) RGD PMID:16157329 NCBI chr 1:82,600,136...82,634,346
Ensembl chr 1:82,600,136...82,632,178 		JBrowse link
G Matn1 matrilin 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:143,117,198...143,127,140
Ensembl chr 5:143,117,504...143,127,059 		JBrowse link
G Matn2 matrilin 2 located_in
is_active_in		 ISO
IBA		 (PMID:10224097)
GO_REF:0000033		 RGD
GO_Central		 PMID:10224097 GO_REF:0000033 NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113 		JBrowse link
G Matn3 matrilin 3 located_in
is_active_in		 ISO
IBA		 (PMID:10660556)
GO_REF:0000033		 RGD
GO_Central		 PMID:10660556 GO_REF:0000033 NCBI chr 6:31,748,517...31,768,564
Ensembl chr 6:31,748,474...31,768,101 		JBrowse link
G Matn4 matrilin 4 located_in
is_active_in		 ISO
IBA		 (PMID:11279097)
GO_REF:0000033		 RGD
GO_Central		 PMID:11279097 GO_REF:0000033 NCBI chr 3:153,120,605...153,135,628
Ensembl chr 3:153,120,632...153,135,865 		JBrowse link
G Mfap4 microfibril associated protein 4 located_in
is_active_in		 ISO
IBA		 (PMID:26601954)
GO_REF:0000033		 RGD
GO_Central		 PMID:26601954 GO_REF:0000033 NCBI chr10:46,167,158...46,170,176
Ensembl chr10:46,167,217...46,170,155 		JBrowse link
G Mgp matrix Gla protein located_in IDA
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:11716499 GO_REF:0000002, RGD:2293597 NCBI chr 4:169,766,290...169,769,612
Ensembl chr 4:169,766,279...169,769,667 		JBrowse link
G Mmrn1 multimerin 1 located_in ISO (PMID:9454761) RGD PMID:9454761 NCBI chr 4:89,875,408...89,950,814
Ensembl chr 4:89,903,174...89,950,474 		JBrowse link
G Mmrn2 multimerin 2 located_in ISO (PMID:23979707) RGD PMID:23979707 NCBI chr16:9,705,925...9,727,405
Ensembl chr16:9,705,892...9,727,405 		JBrowse link
G Myoc myocilin located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:11773026)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:11773026 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127 		JBrowse link
G Ndp norrin cystine knot growth factor NDP located_in
is_active_in		 ISO
IBA		 (PMID:15035989)
GO_REF:0000033		 RGD
GO_Central		 PMID:15035989 GO_REF:0000033 NCBI chr  X:5,796,487...5,820,934
Ensembl chr  X:5,796,487...5,820,934 		JBrowse link
G Npnt nephronectin located_in ISO (PMID:21335239) RGD PMID:21335239 NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401 		JBrowse link
G Otol1 otolin 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:154,339,612...154,349,050
Ensembl chr 2:154,339,612...154,349,023 		JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 located_in
is_active_in		 ISO
IBA
IEA		 (PMID:12535616)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:12535616 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:119,428,978...119,627,626
Ensembl chr 1:119,429,265...119,627,596 		JBrowse link
G Plat plasminogen activator, tissue type NOT|located_in ISO (PMID:1632457) RGD PMID:1632457 NCBI chr16:69,240,582...69,265,177
Ensembl chr16:69,240,585...69,268,223 		JBrowse link
G Plod1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:158,340,674...158,367,581
Ensembl chr 5:158,340,490...158,367,620 		JBrowse link
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:93,084,548...93,167,255
Ensembl chr 8:93,084,513...93,167,255 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 located_in
is_active_in		 IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:27435297)		 Ensembl
GO_Central
RGD		 PMID:27435297 GO_REF:0000033 GO_REF:0000107 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960 		JBrowse link
G Plscr1 phospholipid scramblase 1 located_in ISO
ISS		 (PMID:20870722)
GO_REF:0000024		 RGD
UniProt		 PMID:20870722 GO_REF:0000024 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692 		JBrowse link
G Podnl1 podocan-like 1 located_in ISO (PMID:21672516) RGD PMID:21672516 NCBI chr19:24,027,261...24,033,867
Ensembl chr19:24,027,297...24,033,846 		JBrowse link
G Postn periostin located_in ISO (PMID:18450759) RGD PMID:18450759 NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099 		JBrowse link
G Prg4 proteoglycan 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:62,487,257...62,504,657
Ensembl chr13:62,487,257...62,504,119 		JBrowse link
G Pxdn peroxidasin located_in ISO (PMID:19590037) RGD PMID:19590037 NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345 		JBrowse link
G Rarres2 retinoic acid receptor responder 2 located_in ISO (PMID:19443732) RGD PMID:19443732 NCBI chr 4:77,522,549...77,525,733
Ensembl chr 4:77,522,535...77,525,556 		JBrowse link
G Rpsa ribosomal protein SA IDA RGD PMID:11553521 RGD:2299067 NCBI chr 8:119,851,225...119,855,103
Ensembl chr 8:119,851,225...119,855,247 		JBrowse link
G Scara3 scavenger receptor class A, member 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:40,139,873...40,172,866
Ensembl chr15:40,140,161...40,172,894 		JBrowse link
G Serpine1 serpin family E member 1 located_in ISO
IEA		 (PMID:1632457)
GO_REF:0000107		 RGD
Ensembl		 PMID:1632457 GO_REF:0000107 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657 		JBrowse link
G Serpine2 serpin family E member 2 located_in ISO
IEA		 (PMID:3279057)
GO_REF:0000107		 RGD
Ensembl		 PMID:3279057 GO_REF:0000107 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:10347172), (PMID:9192640)		 Ensembl
RGD		 PMID:9192640 PMID:10347172 GO_REF:0000107 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 located_in ISO (PMID:14709558) RGD PMID:14709558 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Snorc secondary ossification center associated regulator of chondrocyte maturation located_in ISO (PMID:28323137) RGD PMID:28323137 NCBI chr 9:88,140,510...88,145,527
Ensembl chr 9:88,140,419...88,145,891 		JBrowse link
G Sod3 superoxide dismutase 3 located_in IDA
ISO		 (PMID:15528465)
(PMID:9699963)		 RGD PMID:9699963 PMID:15528465 PMID:16372329 RGD:1581086 NCBI chr14:58,610,104...58,615,845
Ensembl chr14:58,609,958...58,615,990 		JBrowse link
G Sparcl1 SPARC like 1 located_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:5,632,816...5,663,866
Ensembl chr14:5,632,569...5,663,865 		JBrowse link
G Ssc5d scavenger receptor cysteine rich family member with 5 domains located_in ISO (PMID:21217009) RGD PMID:21217009 NCBI chr 1:68,891,942...68,910,462
Ensembl chr 1:68,891,949...68,909,743 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 IDA RGD PMID:24224514 RGD:11073670 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 located_in ISO
IEA		 (PMID:18049952)
GO_REF:0000107		 RGD
Ensembl		 PMID:18049952 GO_REF:0000107 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 located_in ISO (PMID:18049952) RGD PMID:18049952 NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 located_in TAS PMID:1333192 BHF-UCL PMID:1333192 RGD:8554613 NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
G Tgm4 transglutaminase 4 located_in
is_active_in		 ISO
IBA
IEA		 (PMID:20596668)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:20596668 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:122,689,429...122,726,463
Ensembl chr 8:122,689,429...122,726,463 		JBrowse link
G Thbs1 thrombospondin 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440 		JBrowse link
G Thbs2 thrombospondin 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:55,670,394...55,699,789
Ensembl chr 1:55,670,394...55,699,789 		JBrowse link
G Thbs3 thrombospondin 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:174,621,788...174,633,594
Ensembl chr 2:174,621,812...174,633,594 		JBrowse link
G Thbs4 thrombospondin 4 located_in
is_active_in		 ISS
ISO
IBA		 GO_REF:0000024
(PMID:22362893)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:22362893 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:23,983,158...24,025,289
Ensembl chr 2:23,983,158...24,026,313 		JBrowse link
G Tnc tenascin C located_in ISO (PMID:23658023) RGD PMID:23658023 NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624 		JBrowse link
G Tnn tenascin N is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:19884327)
(PMID:14709716)		 GO_Central
RGD		 PMID:14709716 PMID:19884327 GO_REF:0000033 NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156 		JBrowse link
G Tnr tenascin R is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:8244531)		 GO_Central
RGD		 PMID:8244531 GO_REF:0000033 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641 		JBrowse link
G Tnxb tenascin XB is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Vcan versican IDA RGD PMID:12586779 RGD:1299255 NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637 		JBrowse link
G Vtn vitronectin is_active_in
located_in		 IDA
IBA
ISO		 GO_REF:0000033
(PMID:1632457)		 GO_Central
RGD		 PMID:1632457 PMID:2426279 GO_REF:0000033, RGD:10003088 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810 		JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:166,377,451...166,382,784
Ensembl chr 5:166,377,455...166,382,637 		JBrowse link
G Vwf von Willebrand factor is_active_in
located_in		 IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000104
(PMID:6754744)		 GO_Central
UniProt
RGD		 PMID:6754744 PMID:14762664 GO_REF:0000033 GO_REF:0000104, RGD:1599021 NCBI chr 4:158,360,152...158,491,539
Ensembl chr 4:158,360,152...158,491,539 		JBrowse link
G Wnt2 Wnt family member 2 located_in ISO (PMID:15507471) RGD PMID:15507471 NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402 		JBrowse link
G Zg16 zymogen granule protein 16 located_in ISO
ISS		 (PMID:17307141)
GO_REF:0000024		 RGD
UniProt		 PMID:17307141 GO_REF:0000024 NCBI chr 1:181,657,722...181,660,079
Ensembl chr 1:181,657,722...181,660,079 		JBrowse link
G Zp1 zona pellucida glycoprotein 1 located_in
is_active_in		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:11906903)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:11906903 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:207,560,881...207,567,261
Ensembl chr 1:207,560,881...207,567,261 		JBrowse link
G Zp2 zona pellucida glycoprotein 2 located_in
is_active_in		 ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:11906903)
GO_REF:0000033
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:11906903 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:174,513,507...174,525,288
Ensembl chr 1:174,513,511...174,525,288 		JBrowse link
G Zp3 zona pellucida glycoprotein 3 located_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:11906903), (PMID:19052627)
GO_REF:0000024
(PMID:19246320)		 Ensembl
RGD
UniProt		 PMID:11906903 PMID:19052627 PMID:19246320 GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513 		JBrowse link
G Zp4 zona pellucida glycoprotein 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:59,005,649...59,012,202
Ensembl chr17:59,005,649...59,012,202 		JBrowse link
basement membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07018244.2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr15:39,788,233...39,788,853 JBrowse link
G Acan aggrecan located_in IEA
ISO		 GO_REF:0000107
(PMID:16061471)		 Ensembl
RGD		 PMID:16061471 GO_REF:0000107 NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627 		JBrowse link
G Ache acetylcholinesterase located_in IEA
ISO		 GO_REF:0000107
(PMID:7885444)		 Ensembl
RGD		 PMID:7885444 GO_REF:0000107 NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651 		JBrowse link
G Acta2 actin alpha 2, smooth muscle IDA MMO:0000538 RGD PMID:30476341 RGD:151893502 NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554 		JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:16061471)		 Ensembl
RGD		 PMID:16061471 GO_REF:0000107 NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103 		JBrowse link
G Agrn agrin located_in IDA
ISO
IEA
ISS		 (PMID:18757743), (PMID:7670489)
GO_REF:0000117
GO_REF:0000024
(PMID:9405491)		 RGD
UniProt		 PMID:7670489 PMID:9405491 PMID:18757743 PMID:15711988 GO_REF:0000024 GO_REF:0000117 (All species) (All species), RGD:1578369 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003 		JBrowse link
G Alb albumin IDA RGD PMID:1723977 RGD:1625719 NCBI chr14:17,607,397...17,622,814
Ensembl chr14:17,607,381...17,622,836 		JBrowse link
G Amelx amelogenin, X-linked located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr  X:25,076,362...25,087,660
Ensembl chr  X:25,076,362...25,087,660 		JBrowse link
G Amtn amelotin located_in
is_active_in		 IDA
ISO
IBA		 PMID:16787391
(PMID:16787391)
GO_REF:0000033		 RGD
GO_Central		 PMID:16787391 PMID:16787391 GO_REF:0000033, RGD:2304068 NCBI chr14:19,648,624...19,661,181
Ensembl chr14:19,648,625...19,661,181 		JBrowse link
G Ang angiogenin located_in ISO (PMID:15166501) RGD PMID:15166501 NCBI chr15:24,312,711...24,323,361 JBrowse link
G Anxa2 annexin A2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658 		JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase part_of
located_in		 ISO
IEA		 (PMID:18664494)
GO_REF:0000107		 RGD
Ensembl		 PMID:18664494 GO_REF:0000107 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694 		JBrowse link
G Ccdc80 coiled-coil domain containing 80 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:18757743)		 GO_Central
RGD		 PMID:18757743 GO_REF:0000033 NCBI chr11:55,685,165...55,718,827
Ensembl chr11:55,685,872...55,719,137 		JBrowse link
G Cd151 CD151 molecule (Raph blood group) part_of ISO (PMID:23302890) RGD PMID:23302890 NCBI chr 1:196,564,744...196,568,753
Ensembl chr 1:196,565,181...196,568,753 		JBrowse link
G Cntnap5b contactin associated protein family member 5B located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr13:17,863,367...18,766,983
Ensembl chr13:18,093,420...18,761,014 		JBrowse link
G Cntnap5bl1 contactin associated protein family member 5B like 1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr13:11,853,761...12,864,307
Ensembl chr13:11,864,166...12,864,242 		JBrowse link
G Cntnap5c contactin associated protein-like 5C located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr13:3,513,615...4,546,285
Ensembl chr13:3,514,198...4,542,745 		JBrowse link
G Col13a1 collagen type XIII alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032 		JBrowse link
G Col15a1 collagen type XV alpha 1 chain located_in
is_active_in		 ISO
IBA		 (PMID:18757743)
GO_REF:0000033		 RGD
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr 5:61,501,963...61,607,591
Ensembl chr 5:61,501,963...61,607,591 		JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain located_in ISO (PMID:12588956), (PMID:15254016), (PMID:18757743), (PMID:19651211), (PMID:7568013) RGD PMID:7568013 PMID:12588956 PMID:15254016 PMID:18757743 PMID:19651211 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593 		JBrowse link
G Col22a1 collagen type XXII alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:103,730,939...103,968,452
Ensembl chr 7:103,731,037...103,968,462 		JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:234,212,256...234,469,445
Ensembl chr 2:234,212,324...234,469,441 		JBrowse link
G Col28a1 collagen type XXVIII alpha 1 chain located_in ISO (PMID:16330543), (PMID:20830809) RGD PMID:16330543 PMID:20830809 NCBI chr 4:36,069,980...36,223,128
Ensembl chr 4:36,069,970...36,223,220 		JBrowse link
G Col2a1 collagen type II alpha 1 chain located_in IEA
ISO		 GO_REF:0000107
(PMID:11273670)		 Ensembl
RGD		 PMID:11273670 GO_REF:0000107 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain located_in ISO (PMID:11511678), (PMID:11732842), (PMID:15895400), (PMID:16041630), (PMID:18757743) RGD PMID:11511678 PMID:11732842 PMID:15895400 PMID:16041630 PMID:18757743 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412 		JBrowse link
G Col4a2 collagen type IV alpha 2 chain located_in ISO (PMID:11732842), (PMID:16041630), (PMID:18757743) RGD PMID:11732842 PMID:16041630 PMID:18757743 (All species) (All species) NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839 		JBrowse link
G Col4a3 collagen type IV alpha 3 chain located_in ISO (PMID:10766752)
(PMID:11732842), (PMID:16041630), (PMID:18757743)		 RGD PMID:10766752 PMID:11732842 PMID:16041630 PMID:18757743 NCBI chr 9:83,875,849...84,004,955
Ensembl chr 9:83,875,561...84,001,895 		JBrowse link
G Col4a4 collagen type IV alpha 4 chain located_in ISO (PMID:2211832)
(PMID:10534397), (PMID:11732842), (PMID:19275937), (PMID:9264260)		 RGD PMID:2211832 PMID:9264260 PMID:10534397 PMID:11732842 PMID:19275937 NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876 		JBrowse link
G Col4a5 collagen type IV alpha 5 chain located_in ISO (PMID:10534397), (PMID:11732842), (PMID:18757743), (PMID:19275937), (PMID:7885444), (PMID:9264260) RGD PMID:7885444 PMID:9264260 PMID:10534397 PMID:11732842 PMID:18757743 More... NCBI chr  X:105,118,762...105,322,699
Ensembl chr  X:105,118,820...105,322,692 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain located_in ISO (PMID:10534397), (PMID:11732842), (PMID:18757743), (PMID:19275937) RGD PMID:10534397 PMID:11732842 PMID:18757743 PMID:19275937 NCBI chr  X:104,766,463...105,117,499
Ensembl chr  X:104,766,957...105,117,500 		JBrowse link
G Col5a1 collagen type V alpha 1 chain located_in IEA
ISO		 GO_REF:0000107
(PMID:14676276)		 Ensembl
RGD		 PMID:14676276 GO_REF:0000107 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain is_active_in ISO
IBA		 (PMID:31837950)
GO_REF:0000033		 RGD
GO_Central		 PMID:31837950 GO_REF:0000033 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Col6a3 collagen type VI alpha 3 chain located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:91,361,578...91,439,434
Ensembl chr 9:91,361,583...91,439,471 		JBrowse link
G Col7a1 collagen type VII alpha 1 chain located_in
is_active_in		 ISO
IBA		 (PMID:18757743), (PMID:19651211)
GO_REF:0000033		 RGD
GO_Central		 PMID:18757743 PMID:19651211 GO_REF:0000033 NCBI chr 8:109,604,877...109,637,249
Ensembl chr 8:109,604,861...109,637,252 		JBrowse link
G Col9a3 collagen type IX alpha 3 chain is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:167,711,776...167,734,468
Ensembl chr 3:167,711,840...167,734,465 		JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase TAS RGD PMID:12684510 RGD:728369 NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107 		JBrowse link
G Cst3 cystatin C IDA RGD PMID:15872057 RGD:2306505 NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822 		JBrowse link
G Dag1 dystroglycan 1 located_in
is_active_in		 ISO
IBA		 (PMID:19348877)
(PMID:11798066), (PMID:23217742), (PMID:9524190)
GO_REF:0000033		 RGD
GO_Central		 PMID:9524190 PMID:11798066 PMID:19348877 PMID:23217742 GO_REF:0000033 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:24191021)		 Ensembl
RGD		 PMID:24191021 GO_REF:0000107 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 IDA RGD PMID:18803302 RGD:10401659 NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018 		JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 located_in ISO (PMID:17324935) RGD PMID:17324935 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414 		JBrowse link
G Efna5 ephrin A5 located_in ISO (PMID:23242526) RGD PMID:23242526 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413 		JBrowse link
G Egfl6 EGF-like-domain, multiple 6 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr  X:27,884,087...27,942,044
Ensembl chr  X:27,884,125...27,942,044 		JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains located_in IEA
ISO		 GO_REF:0000117
(PMID:18757743)		 UniProt
RGD		 PMID:18757743 GO_REF:0000117 NCBI chr 2:56,301,945...56,476,665
Ensembl chr 2:56,302,566...56,476,298 		JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 located_in ISO (PMID:11929769) RGD PMID:11929769 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317 		JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 located_in IEA
ISO		 GO_REF:0000107
(PMID:11929769)		 Ensembl
RGD		 PMID:11929769 GO_REF:0000107 NCBI chr 3:8,213,575...8,219,094
Ensembl chr 3:8,213,663...8,226,866 		JBrowse link
G Fbln1 fibulin 1 located_in ISO (PMID:16061471) RGD PMID:16061471 NCBI chr 7:116,310,582...116,390,075
Ensembl chr 7:116,310,582...116,390,075 		JBrowse link
G Fbn1 fibrillin 1 located_in ISO (PMID:3536967) RGD PMID:3536967 NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889 		JBrowse link
G Fgf9 fibroblast growth factor 9 IDA ovarian granulosa cells and follicles; seminiferous tubules RGD PMID:17494997 RGD:2289861 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309 		JBrowse link
G Fn1 fibronectin 1 located_in IDA
ISO
IEA		 (PMID:11511678), (PMID:24191021), (PMID:8984825)
GO_REF:0000107		 RGD
Ensembl		 PMID:8984825 PMID:11511678 PMID:24191021 PMID:14656002 GO_REF:0000107, RGD:1578551 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 located_in ISO (PMID:15345741), (PMID:15623520), (PMID:16880404), (PMID:17251066), (PMID:17596926), (PMID:18757743) RGD PMID:15345741 PMID:15623520 PMID:16880404 PMID:17251066 PMID:17596926 More... NCBI chr14:12,791,407...13,200,862
Ensembl chr14:12,793,599...13,200,726 		JBrowse link
G Frem1 Fras1 related extracellular matrix 1 located_in ISO (PMID:16880404), (PMID:17251066), (PMID:17596926), (PMID:18757743) RGD PMID:16880404 PMID:17251066 PMID:17596926 PMID:18757743 NCBI chr 5:97,321,266...97,469,523
Ensembl chr 5:97,322,538...97,469,543 		JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 located_in ISO (PMID:16880404), (PMID:17251066), (PMID:17596926) RGD PMID:16880404 PMID:17251066 PMID:17596926 NCBI chr 2:137,602,784...137,740,785
Ensembl chr 2:137,602,784...137,740,785 		JBrowse link
G Frem3 FRAS1 related extracellular matrix 3 located_in ISO (PMID:17251066), (PMID:17462874), (PMID:17596926) RGD PMID:17251066 PMID:17462874 PMID:17596926 NCBI chr19:27,308,469...27,366,771
Ensembl chr19:27,308,469...27,366,771 		JBrowse link
G Gsto1 glutathione S-transferase omega 1 IDA RGD PMID:11311527 RGD:5490519 NCBI chr 1:246,721,089...246,731,228
Ensembl chr 1:246,721,221...246,731,468 		JBrowse link
G Hmcn1 hemicentin 1 located_in ISO (PMID:17015624), (PMID:29488390), (PMID:32035013), (PMID:34504132) RGD PMID:17015624 PMID:29488390 PMID:32035013 PMID:34504132 NCBI chr13:62,615,461...63,084,524
Ensembl chr13:62,615,461...63,084,524 		JBrowse link
G Hmcn2 hemicentin 2 located_in ISO (PMID:17015624) RGD PMID:17015624 NCBI chr 3:14,588,353...14,738,320
Ensembl chr 3:14,588,662...14,738,025 		JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 located_in TAS
ISO		 PMID:8621634
(PMID:10352025), (PMID:10579729), (PMID:11787818), (PMID:11802174), (PMID:12588956), (PMID:15381701), (PMID:15895400), (PMID:15928325), (PMID:18757743), (PMID:7670489)		 RGD PMID:7670489 PMID:10352025 PMID:10579729 PMID:11787818 PMID:11802174 More... (All species) (All species), RGD:12793010 NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594 		JBrowse link
G Itga6 integrin subunit alpha 6 located_in ISO (PMID:9524190) RGD PMID:9524190 NCBI chr 3:56,604,512...56,689,428
Ensembl chr 3:56,617,268...56,689,428 		JBrowse link
G Itgb1 integrin subunit beta 1 IDA RGD PMID:9202984 PMID:18596883 RGD:1581320, RGD:2325689 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Itgb4 integrin subunit beta 4 located_in IEA
ISO		 GO_REF:0000107
(PMID:17011173)		 Ensembl
RGD		 PMID:17011173 GO_REF:0000107 NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012 		JBrowse link
G Lad1 ladinin 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr13:47,249,605...47,263,967
Ensembl chr13:47,249,605...47,263,967 		JBrowse link
G Lama1 laminin subunit alpha 1 located_in
is_active_in		 ISO
IBA		 (PMID:10964500), (PMID:2099832)
GO_REF:0000033
(PMID:10639489), (PMID:11511678), (PMID:12051813), (PMID:12631063), (PMID:12670870), (PMID:1292752), (PMID:15895400), (PMID:15923608), (PMID:16467571), (PMID:16631359), (PMID:18757743), (PMID:1907584), (PMID:19651211), (PMID:21146513), (PMID:9264260), (PMID:9299121)		 RGD
GO_Central		 PMID:1292752 PMID:1907584 PMID:2099832 PMID:9264260 PMID:9299121 More... GO_REF:0000033 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478 		JBrowse link
G Lama2 laminin subunit alpha 2 is_active_in
located_in		 IDA
IBA
ISO		 GO_REF:0000033
(PMID:12051813), (PMID:15895400), (PMID:18757743), (PMID:9264260), (PMID:9396756), (PMID:9524190)
(PMID:14557481), (PMID:2099832)		 GO_Central
RGD		 PMID:2099832 PMID:9264260 PMID:9396756 PMID:9524190 PMID:12051813 More... GO_REF:0000033, RGD:1600203 NCBI chr 1:17,672,675...18,320,641
Ensembl chr 1:17,672,536...18,320,530 		JBrowse link
G Lama3 laminin subunit alpha 3 located_in
is_active_in		 ISO
IBA		 (PMID:12051813), (PMID:15895400), (PMID:18757743), (PMID:9264260)
GO_REF:0000033		 RGD
GO_Central		 PMID:9264260 PMID:12051813 PMID:15895400 PMID:18757743 GO_REF:0000033 NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353 		JBrowse link
G Lama4 laminin subunit alpha 4 located_in ISO (PMID:14557481)
(PMID:15895400), (PMID:18757743), (PMID:9346933), (PMID:9396756), (PMID:9614228)		 RGD PMID:9346933 PMID:9396756 PMID:9614228 PMID:14557481 PMID:15895400 More... NCBI chr20:42,392,268...42,533,347
Ensembl chr20:42,392,268...42,533,347 		JBrowse link
G Lama5 laminin subunit alpha 5 located_in
is_active_in		 ISO
IBA		 (PMID:14557481)
GO_REF:0000033
(PMID:11507772), (PMID:12051813), (PMID:12743034), (PMID:12921739), (PMID:14568553), (PMID:15895400), (PMID:16886065), (PMID:18757743), (PMID:19651211), (PMID:22665518), (PMID:8707838), (PMID:9299121), (PMID:9396756), (PMID:9735344)
(PMID:10651091)		 RGD
GO_Central		 PMID:8707838 PMID:9299121 PMID:9396756 PMID:9735344 PMID:10651091 More... GO_REF:0000033 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451 		JBrowse link
G Lamb1 laminin subunit beta 1 located_in ISO (PMID:14557481), (PMID:2099832)
(PMID:12631063), (PMID:12743034), (PMID:1292752), (PMID:15102706), (PMID:15895400), (PMID:16041630), (PMID:16631359), (PMID:18757743), (PMID:9264260), (PMID:9396756)		 RGD PMID:1292752 PMID:2099832 PMID:9264260 PMID:9396756 PMID:12631063 More... NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
G Lamb2 laminin subunit beta 2 located_in ISO
IEA		 (PMID:10964500), (PMID:14557481), (PMID:2099832)
GO_REF:0000044
(PMID:16041630), (PMID:7670489)		 RGD
UniProt		 PMID:2099832 PMID:7670489 PMID:10964500 PMID:14557481 PMID:16041630 GO_REF:0000044 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
G Lamb3 laminin subunit beta 3 located_in ISO (PMID:18757743), (PMID:8012114), (PMID:9264260) RGD PMID:8012114 PMID:9264260 PMID:18757743 NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405 		JBrowse link
G Lamc1 laminin subunit gamma 1 located_in
is_active_in		 ISO
IBA		 (PMID:14557481), (PMID:15159456), (PMID:22952693)
(PMID:12051813), (PMID:12743034), (PMID:1292752), (PMID:15895400), (PMID:18757743), (PMID:7670489), (PMID:9264260), (PMID:9396756)
GO_REF:0000033		 RGD
GO_Central		 PMID:1292752 PMID:7670489 PMID:9264260 PMID:9396756 PMID:12051813 More... GO_REF:0000033 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492 		JBrowse link
G Lamc2 laminin subunit gamma 2 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:11733994), (PMID:15895400), (PMID:18757743), (PMID:9264260)		 GO_Central
RGD		 PMID:9264260 PMID:11733994 PMID:15895400 PMID:18757743 GO_REF:0000033 NCBI chr13:65,284,664...65,344,164
Ensembl chr13:65,284,664...65,344,200 		JBrowse link
G Lamc3 laminin subunit gamma 3 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:18757743)		 GO_Central
RGD		 PMID:18757743 GO_REF:0000033 NCBI chr 3:15,165,220...15,226,697
Ensembl chr 3:15,165,220...15,226,697 		JBrowse link
G LOC120102904 ladinin-1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:98,259,934...98,274,752
Ensembl chr 5:98,268,768...98,270,330 		JBrowse link
G Loxl1 lysyl oxidase-like 1 IDA RGD PMID:22382377 RGD:7394733 NCBI chr 8:58,691,763...58,716,365
Ensembl chr 8:58,692,593...58,716,356 		JBrowse link
G Loxl2 lysyl oxidase-like 2 located_in IDA
IEA		 PMID:21835952
GO_REF:0000044		 UniProt PMID:21835952 GO_REF:0000044, RGD:8553848 NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067 		JBrowse link
G Marco macrophage receptor with collagenous structure is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:31,616,278...31,648,521
Ensembl chr13:31,616,278...31,648,521 		JBrowse link
G Matn2 matrilin 2 located_in ISO (PMID:19295126) RGD PMID:19295126 NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113 		JBrowse link
G Megf8 multiple EGF-like-domains 8 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613 		JBrowse link
G Megf9 multiple EGF-like-domains 9 located_in ISO (PMID:16981854) RGD PMID:16981854 NCBI chr 5:83,993,565...84,105,622
Ensembl chr 5:83,993,565...84,105,622 		JBrowse link
G Mmrn2 multimerin 2 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr16:9,705,925...9,727,405
Ensembl chr16:9,705,892...9,727,405 		JBrowse link
G Nid1 nidogen 1 located_in ISO
IEA		 (PMID:22952693)
PR:P02468|PR:P37889|PR:Q05793|UniProtKB:P02462|UniProtKB:P08572 (PMID:10639489), (PMID:12051813), (PMID:12243745), (PMID:12588956), (PMID:14566019), (PMID:15895400), (PMID:16330543), (PMID:17596926), (PMID:18757743), (PMID:7670489)
GO_REF:0000044		 RGD
UniProt		 PMID:7670489 PMID:10639489 PMID:12051813 PMID:12243745 PMID:12588956 More... GO_REF:0000044 NCBI chr17:86,085,133...86,158,272
Ensembl chr17:86,085,077...86,158,267 		JBrowse link
G Nid2 nidogen 2 located_in
is_active_in		 IEA
ISO
IBA		 GO_REF:0000044
PR:P02468|PR:P37889|PR:Q05793|UniProtKB:P02462|UniProtKB:P08572 (PMID:12243745), (PMID:15895400), (PMID:18757743)
GO_REF:0000033
(PMID:22952693)		 UniProt
RGD
GO_Central		 PMID:12243745 PMID:15895400 PMID:18757743 PMID:22952693 GO_REF:0000033 GO_REF:0000044 NCBI chr15:4,458,082...4,513,808
Ensembl chr15:4,458,084...4,513,843 		JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin IDA MMO:0000686 RGD PMID:21876538 RGD:38599163 NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078 		JBrowse link
G Npnt nephronectin located_in ISO (PMID:18757743), (PMID:21335239) RGD PMID:18757743 PMID:21335239 NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401 		JBrowse link
G Ntn1 netrin 1 located_in
is_active_in		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:18757743)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326 		JBrowse link
G Ntn3 netrin 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,236,905...13,240,001
Ensembl chr10:13,236,905...13,240,001 		JBrowse link
G Ntn4 netrin 4 located_in ISO (PMID:15186747), (PMID:17588941), (PMID:18757743) RGD PMID:15186747 PMID:17588941 PMID:18757743 NCBI chr 7:28,186,611...28,300,390
Ensembl chr 7:28,186,611...28,300,390 		JBrowse link
G Ntn5 netrin 5 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:96,156,948...96,165,997
Ensembl chr 1:96,156,985...96,165,630 		JBrowse link
G P3h1 prolyl 3-hydroxylase 1 located_in IDA PMID:10455179 MGI PMID:10455179 RGD:633221 NCBI chr 5:132,841,868...132,856,664
Ensembl chr 5:132,841,928...132,856,659 		JBrowse link
G P3h2 prolyl 3-hydroxylase 2 located_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:18487197)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18487197 GO_REF:0000024 GO_REF:0000107 NCBI chr11:74,634,267...74,775,422
Ensembl chr11:74,634,267...74,775,421 		JBrowse link
G Papln papilin, proteoglycan-like sulfated glycoprotein located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 6:103,398,166...103,432,199
Ensembl chr 6:103,398,838...103,432,206 		JBrowse link
G Ptn pleiotrophin IDA RGD PMID:9990431 RGD:10044215 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Pxdn peroxidasin located_in ISO (PMID:22842973) RGD PMID:22842973 NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345 		JBrowse link
G Rell2 RELT-like 2 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr18:29,789,996...29,793,986
Ensembl chr18:29,790,415...29,793,986 		JBrowse link
G Rpsa ribosomal protein SA IDA RGD PMID:11553521 RGD:2299067 NCBI chr 8:119,851,225...119,855,103
Ensembl chr 8:119,851,225...119,855,247 		JBrowse link
G Runx1 RUNX family transcription factor 1 located_in ISO (PMID:17011173) RGD PMID:17011173 NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542 		JBrowse link
G Serpinf1 serpin family F member 1 IDA RGD PMID:15616035 RGD:1359799 NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 located_in IDA
TAS		 PMID:8621634 RGD
CAFA		 PMID:9015313 PMID:8621634 RGD:61563, RGD:12793010 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522 		JBrowse link
G Smoc1 SPARC related modular calcium binding 1 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:18757743)		 GO_Central
RGD		 PMID:18757743 GO_REF:0000033 NCBI chr 6:100,701,330...100,897,441
Ensembl chr 6:100,701,346...100,862,699 		JBrowse link
G Smoc2 SPARC related modular calcium binding 2 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:18757743)		 GO_Central
RGD		 PMID:18757743 GO_REF:0000033 NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693 		JBrowse link
G Sparc secreted protein acidic and cysteine rich located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:39,516,394...39,538,252
Ensembl chr10:39,516,406...39,538,396 		JBrowse link
G Spn sialophorin located_in ISO (PMID:7514104) RGD PMID:7514104 NCBI chr 1:181,746,937...181,759,564
Ensembl chr 1:181,746,429...181,759,628 		JBrowse link
G Tf transferrin IDA RGD PMID:1723977 RGD:1625719 NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 IDA RGD PMID:16479080 RGD:2302094 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfbi transforming growth factor, beta induced IDA RGD PMID:12911551 RGD:1304421 NCBI chr17:7,955,603...7,984,903
Ensembl chr17:7,955,603...7,985,240 		JBrowse link
G Thbs2 thrombospondin 2 located_in ISO (PMID:10669089) RGD PMID:10669089 NCBI chr 1:55,670,394...55,699,789
Ensembl chr 1:55,670,394...55,699,789 		JBrowse link
G Thbs4 thrombospondin 4 located_in IEA
ISO		 GO_REF:0000107
(PMID:17927980)		 Ensembl
RGD		 PMID:17927980 GO_REF:0000107 NCBI chr 2:23,983,158...24,025,289
Ensembl chr 2:23,983,158...24,026,313 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 located_in IDA
ISO		 (PMID:12950084) RGD PMID:12950084 PMID:9579471 RGD:2290365 NCBI chr  X:1,212,969...1,217,714
Ensembl chr  X:1,212,972...1,217,664 		JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 located_in ISO (PMID:12950084) RGD PMID:12950084 NCBI chr10:103,541,199...103,590,611
Ensembl chr10:103,531,505...103,590,611 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 located_in IEA
ISO		 GO_REF:0000107
(PMID:12950084)		 Ensembl
RGD		 PMID:12950084 GO_REF:0000107 NCBI chr 7:17,520,827...17,571,850
Ensembl chr 7:17,521,919...17,571,839 		JBrowse link
G Tinag tubulointerstitial nephritis antigen located_in ISO (PMID:1762287) RGD PMID:1762287 NCBI chr 8:77,800,031...77,885,077
Ensembl chr 8:77,800,032...77,885,077 		JBrowse link
G Tnc tenascin C located_in ISO (PMID:18950615), (PMID:7687262), (PMID:9013311) RGD PMID:7687262 PMID:9013311 PMID:18950615 NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624 		JBrowse link
G Ush2a usherin located_in
is_active_in		 ISO
IBA
IEA		 (PMID:12433396)
(PMID:14676276)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:12433396 PMID:14676276 GO_REF:0000033 GO_REF:0000107 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:11940521 RGD:628330 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Vtn vitronectin IDA RGD PMID:11728964 RGD:10003096 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810 		JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 located_in ISO (PMID:18314316), (PMID:18757743) RGD PMID:18314316 PMID:18757743 NCBI chr 5:166,377,451...166,382,784
Ensembl chr 5:166,377,455...166,382,637 		JBrowse link
G Vwa2 von Willebrand factor A domain containing 2 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:19651211)		 GO_Central
RGD		 PMID:19651211 GO_REF:0000033 NCBI chr 1:255,922,263...255,963,920
Ensembl chr 1:255,923,541...255,963,934 		JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr14:85,683,670...85,825,068
Ensembl chr14:85,684,414...85,818,524 		JBrowse link
collagen type I trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain part_of ISO
IBA		 MGI:1857154 (PMID:7790374), (PMID:8018053)
GO_REF:0000033
(PMID:14976317), (PMID:17576241), (PMID:19932771), (PMID:26848503), (PMID:28281531)		 RGD
GO_Central		 PMID:7790374 PMID:8018053 PMID:14976317 PMID:17576241 PMID:19932771 More... GO_REF:0000033 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col1a2 collagen type I alpha 2 chain part_of IEA
ISO
IBA		 GO_REF:0000107
(PMID:17955022), (PMID:18375391), (PMID:19932771), (PMID:26848503)
(PMID:7825727)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:7825727 PMID:17955022 PMID:18375391 PMID:19932771 PMID:26848503 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867 		JBrowse link
collagen type II trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen type II alpha 1 chain part_of ISO
IBA
IEA		 (PMID:8660302)
GO_REF:0000033
MGI:1857275 (PMID:7276808), (PMID:9880238)
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:7276808 PMID:8660302 PMID:9880238 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
collagen type III trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen type III alpha 1 chain part_of ISO (PMID:7825727)
(PMID:17576241), (PMID:18805790), (PMID:19932771), (PMID:7487954)		 RGD PMID:7487954 PMID:7825727 PMID:17576241 PMID:18805790 PMID:19932771 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
collagen type IV trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col4a1 collagen type IV alpha 1 chain part_of ISO (PMID:16107487)
(PMID:12101409)		 RGD PMID:12101409 PMID:16107487 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412 		JBrowse link
G Col4a2 collagen type IV alpha 2 chain part_of IBA
ISO		 GO_REF:0000033
(PMID:12101409)		 GO_Central
RGD		 PMID:12101409 GO_REF:0000033 NCBI chr16:78,047,591...78,183,360
Ensembl chr16:78,047,602...78,183,839 		JBrowse link
G Col4a3 collagen type IV alpha 3 chain part_of ISO (PMID:10766752)
(PMID:12101409)		 RGD PMID:10766752 PMID:12101409 NCBI chr 9:83,875,849...84,004,955
Ensembl chr 9:83,875,561...84,001,895 		JBrowse link
G Col4a4 collagen type IV alpha 4 chain part_of ISO
IBA		 (PMID:7523402)
(PMID:7962065)
GO_REF:0000033		 RGD
GO_Central		 PMID:7523402 PMID:7962065 GO_REF:0000033 NCBI chr 9:83,833,173...83,875,436
Ensembl chr 9:83,755,515...83,875,876 		JBrowse link
G Col4a5 collagen type IV alpha 5 chain part_of ISO (PMID:12101409) RGD PMID:12101409 NCBI chr  X:105,118,762...105,322,699
Ensembl chr  X:105,118,820...105,322,692 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain part_of IBA
ISO		 GO_REF:0000033
(PMID:10965041), (PMID:12101409)		 GO_Central
RGD		 PMID:10965041 PMID:12101409 GO_REF:0000033 NCBI chr  X:104,766,463...105,117,499
Ensembl chr  X:104,766,957...105,117,500 		JBrowse link
collagen type V trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col5a1 collagen type V alpha 1 chain part_of TAS
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:9683580)		 GO_Central
Ensembl
RGD		 PMID:9683580 PMID:10852920 GO_REF:0000033 GO_REF:0000107, RGD:70693 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588 		JBrowse link
G Col5a2 collagen type V alpha 2 chain part_of TAS
IBA
ISO		 GO_REF:0000033
(PMID:9425231), (PMID:9783710)		 GO_Central
RGD		 PMID:9425231 PMID:9783710 PMID:9822201 GO_REF:0000033, RGD:70694 NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154 		JBrowse link
G Col5a3 collagen type V alpha 3 chain part_of TAS
ISO		 (PMID:15908193) RGD PMID:15908193 PMID:10852920 RGD:70693 NCBI chr 8:19,304,564...19,349,809
Ensembl chr 8:19,304,571...19,349,853 		JBrowse link
G Emid1 EMI domain containing 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:80,000,486...80,043,561
Ensembl chr14:80,000,486...80,043,620 		JBrowse link
collagen type X trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col10a1 collagen type X alpha 1 chain part_of ISO (PMID:11839302) RGD PMID:11839302 NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494 		JBrowse link
collagen type XI trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a1 collagen type XI alpha 1 chain part_of ISO
IBA		 (PMID:3182841)
GO_REF:0000033		 RGD
GO_Central		 PMID:3182841 GO_REF:0000033 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col28a1 collagen type XXVIII alpha 1 chain part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:36,069,980...36,223,128
Ensembl chr 4:36,069,970...36,223,220 		JBrowse link
collagen type XII trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col12a1 collagen type XII alpha 1 chain IDA RGD PMID:10419532 RGD:727275 NCBI chr 8:80,547,592...80,665,665
Ensembl chr 8:80,547,593...80,665,686 		JBrowse link
collagen type XVIII trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col18a1 collagen type XVIII alpha 1 chain TAS RGD PMID:11592600 RGD:632362 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593 		JBrowse link
cone matrix sheath term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbp3 retinol binding protein 3 located_in
is_active_in		 ISO
IBA		 (PMID:21935947)
GO_REF:0000033		 RGD
GO_Central		 PMID:21935947 GO_REF:0000033 NCBI chr16:9,267,538...9,276,006
Ensembl chr16:9,267,538...9,276,006 		JBrowse link
EMILIN complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emilin1 elastin microfibril interfacer 1 part_of ISO (PMID:10821830), (PMID:18463100) RGD PMID:10821830 PMID:18463100 NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698 		JBrowse link
extracellular matrix of synaptic cleft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama5 laminin subunit alpha 5 is_active_in ISO (PMID:29091766) RGD PMID:29091766 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451 		JBrowse link
G Mmp9 matrix metallopeptidase 9 is_active_in IDA PMID:18332222 SynGO PMID:18332222 RGD:405650358 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120 		JBrowse link
G Sparcl1 SPARC like 1 is_active_in IDA PMID:17151913 SynGO PMID:17151913 RGD:13702411 NCBI chr14:5,632,816...5,663,866
Ensembl chr14:5,632,569...5,663,865 		JBrowse link
G Tnc tenascin C is_active_in IDA PMID:21734302 SynGO PMID:21734302 RGD:155230724 NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624 		JBrowse link
fibrillar collagen trimer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col27a1 collagen type XXVII alpha 1 chain part_of IEA
ISO		 GO_REF:0000107
(PMID:17331945)		 Ensembl
RGD		 PMID:17331945 GO_REF:0000107 NCBI chr 5:76,647,302...76,765,989
Ensembl chr 5:76,647,429...76,765,174 		JBrowse link
G Lum lumican part_of ISO
IEA		 (PMID:10734230)
GO_REF:0000107		 RGD
Ensembl		 PMID:10734230 GO_REF:0000107 NCBI chr 7:32,358,990...32,365,794
Ensembl chr 7:32,358,614...32,365,793 		JBrowse link
interphotoreceptor matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impg1 interphotoreceptor matrix proteoglycan 1 located_in IEA
ISO		 GO_REF:0000044
(PMID:32265257)		 UniProt
RGD		 PMID:32265257 GO_REF:0000044 NCBI chr 8:81,243,624...81,389,722
Ensembl chr 8:81,243,624...81,389,722 		JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 located_in IEA
ISO		 GO_REF:0000044
(PMID:32265257)		 UniProt
RGD		 PMID:32265257 GO_REF:0000044 NCBI chr11:44,318,836...44,418,382
Ensembl chr11:44,318,836...44,418,382 		JBrowse link
G Rbp3 retinol binding protein 3 IDA RGD PMID:8282025 RGD:6893658 NCBI chr16:9,267,538...9,276,006
Ensembl chr16:9,267,538...9,276,006 		JBrowse link
G Rtbdn retbindin located_in ISO (PMID:25542898) RGD PMID:25542898 NCBI chr19:23,197,506...23,205,544
Ensembl chr19:23,197,506...23,204,438 		JBrowse link
G Vcan versican located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637 		JBrowse link
interstitial matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Adamtsl4 ADAMTS-like 4 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 2:183,235,634...183,247,091
Ensembl chr 2:183,235,646...183,246,848 		JBrowse link
G C20h6orf15 similar to human chromosome 6 open reading frame 15 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr20:3,172,330...3,173,886
Ensembl chr20:3,172,330...3,173,886 		JBrowse link
G Ccdc80 coiled-coil domain containing 80 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr11:55,685,165...55,718,827
Ensembl chr11:55,685,872...55,719,137 		JBrowse link
G Col14a1 collagen type XIV alpha 1 chain is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:22906538)		 GO_Central
RGD		 PMID:22906538 GO_REF:0000033 NCBI chr 7:86,722,093...86,937,215
Ensembl chr 7:86,722,094...86,937,214 		JBrowse link
G Ecm2 extracellular matrix protein 2 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr17:15,120,194...15,152,536
Ensembl chr17:15,120,196...15,152,516 		JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains located_in IEA
ISO		 GO_REF:0000107
(PMID:18757743)		 Ensembl
RGD		 PMID:18757743 GO_REF:0000107 NCBI chr 2:56,301,945...56,476,665
Ensembl chr 2:56,302,566...56,476,298 		JBrowse link
G Igf1 insulin-like growth factor 1 IDA RGD PMID:15544842 RGD:1580475 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Kazald1 Kazal-type serine peptidase inhibitor domain 1 located_in
is_active_in		 ISO
IBA		 (PMID:18757743)
GO_REF:0000033		 RGD
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr 1:243,939,596...243,943,060
Ensembl chr 1:243,939,647...243,943,059 		JBrowse link
G Mamdc2 MAM domain containing 2 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 1:220,863,959...221,016,493
Ensembl chr 1:220,863,976...221,016,354 		JBrowse link
G Nav2 neuron navigator 2 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 1:98,957,629...99,322,339
Ensembl chr 1:98,663,759...99,322,337 		JBrowse link
G Nepn nephrocan located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:31,786,607...31,799,458
Ensembl chr20:31,783,526...31,799,446 		JBrowse link
G Smoc2 SPARC related modular calcium binding 2 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693 		JBrowse link
G Tnc tenascin C located_in ISO (PMID:11767049) RGD PMID:11767049 NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624 		JBrowse link
G Vit vitrin is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:18757743)		 GO_Central
RGD		 PMID:18757743 GO_REF:0000033 NCBI chr 6:16,445,966...16,565,644
Ensembl chr 6:16,445,955...16,565,665 		JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr 5:166,377,451...166,382,784
Ensembl chr 5:166,377,455...166,382,637 		JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 located_in ISO (PMID:18757743) RGD PMID:18757743 NCBI chr14:85,683,670...85,825,068
Ensembl chr14:85,684,414...85,818,524 		JBrowse link
laminin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama1 laminin subunit alpha 1 part_of ISO (PMID:8034675) RGD PMID:8034675 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478 		JBrowse link
G Lamb1 laminin subunit beta 1 part_of IBA
ISO		 GO_REF:0000033
(PMID:8034675)		 GO_Central
RGD		 PMID:8034675 GO_REF:0000033 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
G Lamb2 laminin subunit beta 2 part_of IBA
ISO		 GO_REF:0000033
(PMID:8034675)		 GO_Central
RGD		 PMID:8034675 GO_REF:0000033 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
G Lamb3 laminin subunit beta 3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405 		JBrowse link
G Megf9 multiple EGF-like-domains 9 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:83,993,565...84,105,622
Ensembl chr 5:83,993,565...84,105,622 		JBrowse link
G Ntn4 netrin 4 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:28,186,611...28,300,390
Ensembl chr 7:28,186,611...28,300,390 		JBrowse link
G Pmp22 peripheral myelin protein 22 part_of ISO (PMID:16436605) RGD PMID:16436605 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714 		JBrowse link
laminin-1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama1 laminin subunit alpha 1 part_of ISO UniProtKB:P07942 (PMID:10964500), (PMID:8601594)
(PMID:17517882), (PMID:9264260)		 RGD PMID:8601594 PMID:9264260 PMID:10964500 PMID:17517882 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478 		JBrowse link
G Lamb1 laminin subunit beta 1 part_of ISO UniProtKB:P25391 (PMID:10964500), (PMID:16289578)
(PMID:9264260)		 RGD PMID:9264260 PMID:10964500 PMID:16289578 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
G Lamc1 laminin subunit gamma 1 IDA RGD PMID:8648916 RGD:633159 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492 		JBrowse link
laminin-10 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama5 laminin subunit alpha 5 part_of ISO (PMID:10964500)
PR:P02468|PR:P02469 (PMID:9299121)		 RGD PMID:9299121 PMID:10964500 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451 		JBrowse link
G Lamb1 laminin subunit beta 1 part_of ISO (PMID:10964500), (PMID:16289578)
PR:P02468|PR:Q61001 (PMID:9299121)		 RGD PMID:9299121 PMID:10964500 PMID:16289578 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
G Lamc1 laminin subunit gamma 1 part_of ISO PR:P02469|PR:Q61001 (PMID:9299121) RGD PMID:9299121 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492 		JBrowse link
laminin-2 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 part_of ISO (PMID:16289578) RGD PMID:16289578 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
G Lamc2 laminin subunit gamma 2 IDA RGD PMID:9417868 RGD:633095 NCBI chr13:65,284,664...65,344,164
Ensembl chr13:65,284,664...65,344,200 		JBrowse link
laminin-3 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama1 laminin subunit alpha 1 part_of ISO UniProtKB:P55268 (PMID:10964500) RGD PMID:10964500 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478 		JBrowse link
G Lama3 laminin subunit alpha 3 IDA RGD PMID:8923212 RGD:633107 NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353 		JBrowse link
G Lamb2 laminin subunit beta 2 part_of IEA
ISO		 GO_REF:0000107
(PMID:20566382)
UniProtKB:P25391 (PMID:10964500)		 Ensembl
RGD		 PMID:10964500 PMID:20566382 GO_REF:0000107 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
laminin-5 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama3 laminin subunit alpha 3 part_of ISO (PMID:9264260) RGD PMID:9264260 NCBI chr18:3,523,168...3,751,722
Ensembl chr18:3,523,133...3,751,353 		JBrowse link
G Lama5 laminin subunit alpha 5 IDA RGD PMID:9417868 RGD:633095 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451 		JBrowse link
G Lamb3 laminin subunit beta 3 part_of ISO (PMID:9264260) RGD PMID:9264260 NCBI chr13:104,833,810...104,875,405
Ensembl chr13:104,833,873...104,875,405 		JBrowse link
G Lamc2 laminin subunit gamma 2 part_of ISO (PMID:9264260) RGD PMID:9264260 NCBI chr13:65,284,664...65,344,164
Ensembl chr13:65,284,664...65,344,200 		JBrowse link
laminin-8 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 part_of ISO (PMID:16289578) RGD PMID:16289578 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
matrilin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Matn2 matrilin 2 part_of ISO (PMID:10224097) RGD PMID:10224097 NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113 		JBrowse link
G Matn3 matrilin 3 part_of ISO (PMID:10660556) RGD PMID:10660556 NCBI chr 6:31,748,517...31,768,564
Ensembl chr 6:31,748,474...31,768,101 		JBrowse link
G Matn4 matrilin 4 part_of ISO (PMID:11279097) RGD PMID:11279097 NCBI chr 3:153,120,605...153,135,628
Ensembl chr 3:153,120,632...153,135,865 		JBrowse link
multimerin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmrn1 multimerin 1 part_of ISO (PMID:9454761) RGD PMID:9454761 NCBI chr 4:89,875,408...89,950,814
Ensembl chr 4:89,903,174...89,950,474 		JBrowse link
perineuronal net term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:18364019 GO_REF:0000033, RGD:2315810 NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627 		JBrowse link
G Bcan brevican located_in
is_active_in		 IDA
ISO
IBA
IEA		 MMO:0000669
(PMID:14550776), (PMID:22121037)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:14550776 PMID:22121037 PMID:16644727 GO_REF:0000033 GO_REF:0000107, RGD:9589827 NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460 		JBrowse link
G Hapln1 hyaluronan and proteoglycan link protein 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:20,631,640...20,696,388
Ensembl chr 2:20,631,640...20,693,777 		JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:173,488,909...173,496,824
Ensembl chr 2:173,491,160...173,496,588 		JBrowse link
G Hapln3 hyaluronan and proteoglycan link protein 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:133,046,465...133,064,665
Ensembl chr 1:133,046,467...133,080,177 		JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:14550776), (PMID:22121037)		 GO_Central
RGD		 PMID:14550776 PMID:22121037 GO_REF:0000033 NCBI chr16:19,333,106...19,341,243
Ensembl chr16:19,333,106...19,341,243 		JBrowse link
G Ncan neurocan is_active_in IDA
IBA		 MMO:0000669,MMO:0000662
GO_REF:0000033		 GO_Central
RGD		 PMID:16644727 GO_REF:0000033, RGD:9589827 NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436 		JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 located_in IDA
ISO
IEA		 (PMID:10793198)
GO_REF:0000107		 RGD
Ensembl		 PMID:10793198 PMID:16644727 GO_REF:0000107, RGD:9589827 NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218 		JBrowse link
G Tnr tenascin R located_in IEA
ISO		 GO_REF:0000107
(PMID:10341229), (PMID:8244531)		 Ensembl
RGD		 PMID:8244531 PMID:10341229 GO_REF:0000107 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641 		JBrowse link
G Vcan versican is_active_in IDA
IBA		 MMO:0000669,MMO:0000662
GO_REF:0000033		 GO_Central
RGD		 PMID:16644727 GO_REF:0000033, RGD:9589827 NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637 		JBrowse link
perisynaptic extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan is_active_in
located_in		 ISO
IEA		 (PMID:27615741)
GO_REF:0000107		 RGD
Ensembl		 PMID:27615741 GO_REF:0000107 NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627 		JBrowse link
G Bcan brevican is_active_in IDA PMID:16503162
PMID:10414531		 SynGO PMID:16503162 PMID:10414531 RGD:13702210, RGD:13702202 NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460 		JBrowse link
G Ncan neurocan is_active_in ISO (PMID:29670169), (PMID:30356641) RGD PMID:29670169 PMID:30356641 NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436 		JBrowse link
G Slit2 slit guidance ligand 2 is_active_in IMP
EXP
NAS
IDA		 PMID:34686348 SynGO PMID:34686348 PMID:34686348 PMID:34686348 PMID:34686348 RGD:405650259, RGD:405650259, RGD:405650259, RGD:405650259 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948 		JBrowse link
G Tnc tenascin C is_active_in IBA
ISO		 GO_REF:0000033
(PMID:16452087)		 GO_Central
RGD		 PMID:16452087 GO_REF:0000033 NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624 		JBrowse link
G Tnr tenascin R is_active_in IDA PMID:11598921 SynGO PMID:11598921 RGD:13702357 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641 		JBrowse link
tenascin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnc tenascin C part_of ISO (PMID:14709716) RGD PMID:14709716 NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624 		JBrowse link
G Tnn tenascin N part_of ISO (PMID:17909022)
(PMID:14709716)		 RGD PMID:14709716 PMID:17909022 NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156 		JBrowse link
G Tnr tenascin R part_of IEA
ISO		 GO_REF:0000107
(PMID:2477380)		 Ensembl
RGD		 PMID:2477380 GO_REF:0000107 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      external encapsulating structure 414
        extracellular matrix 412
          collagen-containing extracellular matrix 271
            EMILIN complex 1
            anchoring collagen complex + 1
            basement membrane + 120
            collagen type XXVI trimer 0
            collagen type XXVIII trimer 0
            complex of collagen trimers + 19
            cuticular extracellular matrix + 0
            extracellular matrix of synaptic cleft 4
            hyaline layer + 0
            interphotoreceptor matrix + 5
            interstitial matrix 17
            matrilin complex 3
            multimerin complex 1
            perisynaptic extracellular matrix + 12
            synapse-associated extracellular matrix + 15
            tenascin complex 3
            transforming growth factor beta complex 0
Path 2
Term Annotations click to browse term
  cellular_component 21321
    cellular anatomical structure 21026
      cell periphery 7083
        external encapsulating structure 414
          extracellular matrix 412
            collagen-containing extracellular matrix 271
              EMILIN complex 1
              anchoring collagen complex + 1
              basement membrane + 120
              collagen type XXVI trimer 0
              collagen type XXVIII trimer 0
              complex of collagen trimers + 19
              cuticular extracellular matrix + 0
              extracellular matrix of synaptic cleft 4
              hyaline layer + 0
              interphotoreceptor matrix + 5
              interstitial matrix 17
              matrilin complex 3
              multimerin complex 1
              perisynaptic extracellular matrix + 12
              synapse-associated extracellular matrix + 15
              tenascin complex 3
              transforming growth factor beta complex 0
paths to the root