Angptl1 (angiopoietin-like 1) - Rat Genome Database

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Gene: Angptl1 (angiopoietin-like 1) Rattus norvegicus
Analyze
Symbol: Angptl1
Name: angiopoietin-like 1
RGD ID: 1598128
Description: Predicted to enable signaling receptor binding activity. Predicted to be involved in transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Orthologous to human ANGPTL1 (angiopoietin like 1); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: angiopoietin-related protein 1; LOC679942; similar to angiopoietin-like 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21368,963,198 - 68,969,742 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1368,962,991 - 68,992,570 (+)Ensembl
Rnor_6.01374,456,487 - 74,463,031 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1374,410,010 - 74,474,681 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01379,376,764 - 79,383,308 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41372,039,198 - 72,045,772 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1368,826,260 - 68,832,804 (+)NCBICelera
Cytogenetic Map13q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:10025962   PMID:10051567   PMID:19199708   PMID:19786610  


Genomics

Comparative Map Data
Angptl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21368,963,198 - 68,969,742 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1368,962,991 - 68,992,570 (+)Ensembl
Rnor_6.01374,456,487 - 74,463,031 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1374,410,010 - 74,474,681 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01379,376,764 - 79,383,308 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41372,039,198 - 72,045,772 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1368,826,260 - 68,832,804 (+)NCBICelera
Cytogenetic Map13q22NCBI
ANGPTL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381178,849,535 - 178,871,077 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1178,849,535 - 178,871,077 (-)EnsemblGRCh38hg38GRCh38
GRCh371178,818,670 - 178,840,212 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361177,085,293 - 177,106,838 (-)NCBINCBI36hg18NCBI36
Build 341175,550,327 - 175,571,872NCBI
Celera1151,927,509 - 151,949,057 (-)NCBI
Cytogenetic Map1q25.2NCBI
HuRef1150,046,286 - 150,067,817 (-)NCBIHuRef
CHM1_11180,242,420 - 180,263,935 (-)NCBICHM1_1
Angptl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391156,666,593 - 156,688,648 (+)NCBIGRCm39mm39
GRCm39 Ensembl1156,666,132 - 156,688,648 (+)Ensembl
GRCm381156,839,023 - 156,861,078 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1156,838,562 - 156,861,078 (+)EnsemblGRCm38mm10GRCm38
MGSCv371158,769,154 - 158,791,209 (+)NCBIGRCm37mm9NCBIm37
MGSCv361158,675,700 - 158,697,755 (+)NCBImm8
Celera1159,236,183 - 159,256,091 (+)NCBICelera
Cytogenetic Map1G3NCBI
Angptl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540618,203,310 - 18,224,789 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540618,160,164 - 18,224,822 (-)NCBIChiLan1.0ChiLan1.0
ANGPTL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11158,030,657 - 158,052,089 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1158,030,657 - 158,052,089 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01154,339,139 - 154,360,540 (-)NCBIMhudiblu_PPA_v0panPan3
ANGPTL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1720,919,192 - 20,945,140 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl720,919,214 - 20,940,792 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha720,445,917 - 20,467,496 (+)NCBI
ROS_Cfam_1.0720,658,122 - 20,682,799 (+)NCBI
ROS_Cfam_1.0 Ensembl720,658,125 - 20,684,039 (+)Ensembl
UMICH_Zoey_3.1720,565,042 - 20,586,622 (+)NCBI
UNSW_CanFamBas_1.0720,673,117 - 20,694,703 (+)NCBI
UU_Cfam_GSD_1.0720,808,240 - 20,829,825 (+)NCBI
Angptl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934492,201,783 - 92,224,286 (+)NCBI
SpeTri2.0NW_00493648110,048,439 - 10,071,035 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANGPTL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9120,654,075 - 120,680,494 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19120,656,313 - 120,684,313 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29132,389,252 - 132,413,525 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ANGPTL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12550,468,283 - 50,489,283 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2550,468,826 - 50,490,343 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605551,997,890 - 52,019,658 (+)NCBIVero_WHO_p1.0
Angptl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247713,465,761 - 3,486,141 (+)NCBIHetGla_female_1.0hetGla2


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303028Bp329Blood pressure QTL 329arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)135849787273485113Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)135949252277046890Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)135987440885581182Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
4889861Pur29Proteinuria QTL 2913.80.005total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
12879444Bp397Blood pressure QTL 397arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134504940490049404Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134551471990514719Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:22
Count of miRNA genes:19
Interacting mature miRNAs:21
Transcripts:ENSRNOT00000065801
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 13 8 16 6 7 16 3 6
Low 3 30 23 15 3 15 2 4 64 35 23 8 2
Below cutoff 26 26 26 10 2

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000065801   ⟹   ENSRNOP00000059194
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1368,962,991 - 68,980,095 (+)Ensembl
Rnor_6.0 Ensembl1374,456,487 - 74,463,031 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000079152   ⟹   ENSRNOP00000073625
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1368,962,991 - 68,992,570 (+)Ensembl
Rnor_6.0 Ensembl1374,410,010 - 74,474,681 (+)Ensembl
RefSeq Acc Id: NM_001109383   ⟹   NP_001102853
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21368,963,198 - 68,969,742 (+)NCBI
Rnor_6.01374,456,487 - 74,463,031 (+)NCBI
Rnor_5.01379,376,764 - 79,383,308 (+)NCBI
RGSC_v3.41372,039,198 - 72,045,772 (+)RGD
Celera1368,826,260 - 68,832,804 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001102853 (Get FASTA)   NCBI Sequence Viewer  
  NP_001389285 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM09476 (Get FASTA)   NCBI Sequence Viewer  
  EDM09477 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001102853   ⟸   NM_001109383
- Peptide Label: precursor
- Sequence:
RefSeq Acc Id: ENSRNOP00000073625   ⟸   ENSRNOT00000079152
RefSeq Acc Id: ENSRNOP00000059194   ⟸   ENSRNOT00000065801
Protein Domains
Fibrinogen C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K603-F1-model_v2 AlphaFold A0A0G2K603 1-490 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698917
Promoter ID:EPDNEW_R9442
Type:initiation region
Name:Angptl1_1
Description:angiopoietin-like 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01374,456,493 - 74,456,553EPDNEW

Strain Variation

Strain Sequence Variants (MRatBN7.2)
ACI/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
ACI/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN-Lx/CubMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/SsN (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BUF/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH2/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH3/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
DA/OlaHsd (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/DuCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FHH/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE16/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE18/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
GK/FarMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB10/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB2/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB20/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB31/IpcvMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB4/IpcvMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LE/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEW/Crl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF10A/StmMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF11/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1A/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1C/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF2B/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF3/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF4/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LH/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LL/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LN/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/NRrrcMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MR/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MWF/Hsd (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
PVG/Seac (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHR/OlalpcvMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHRSP/A3NCrl (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SR/JrHsd (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SS/JrHsdMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WAG/RijCrl (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/NCrl (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WN/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
Damaging Variants


Assembly: Rnor_6.0

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain
13 74462138 74462139 G T snv CDR, SBN/Ygl (RGD), SBN/Ygl (MCW)
13 74462150 74462151 G C snv SHR/OlalpcvMcwi (2019), WKY/NCrl (2019), WKY/N (2020), WN/N (2020), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), ACI/EurMcwi (2019), BXH3/CubMcwi (2020), DA/OlaHsd (2019), F344/DuCrl (2019), F344/N (2020), F344/Stm (2019), FHH/EurMcwi (2019), HXB10/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), MR/N (2020), MWF/Hsd (2019), PVG/Seac (2019), SHRSP/A3NCrl (2019)
13 74462153 74462154 C T snv WN/N (2020), ACI/EurMcwi (2019), WKY/NCrl (2019), SHR/OlalpcvMcwi (2019), SHRSP/A3NCrl (2019), PVG/Seac (2019), MWF/Hsd (2019), MR/N (2020), HXB20/IpcvMcwi (2020), HXB10/IpcvMcwi (2019), FHH/EurMcwi (2019), F344/Stm (2019), F344/N (2020), F344/DuCrl (2019), DA/OlaHsd (2019), BXH3/CubMcwi (2020), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), WKY/N (2020)
13 74462183 74462184 G A snv WKY/N (2020), WN/N (2020), WKY/NCrl (2019), WAG/RijCrl (2020), SHR/OlalpcvMcwi (2019), PVG/Seac (2019), M520/N (2020), HXB10/IpcvMcwi (2019), FHH/EurMcwi (2019), F344/Stm (2019), BXH3/CubMcwi (2020), ACI/EurMcwi (2019), SHRSP/Gcrc (RGD), SS/JrHsdMcwi (MCW), GH/OmrMcwi (MCW), FHL/EurMcwi (MCW), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW)
13 74462191 74462192 A G snv ACI/EurMcwi (MCW), WN/N (2020), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), SHRSP/Gcrc (RGD), BXH3/CubMcwi (2020), FHH/EurMcwi (2019), HXB10/IpcvMcwi (2019), M520/N (2020), PVG/Seac (2019), SHR/OlalpcvMcwi (2019), WAG/RijCrl (2020), WKY/N (2020), COP/CrCrl (MCW & UW)
13 74462276 74462277 T A snv WKY/NCrl (2019), WKY/N (2020), SHR/OlalpcvMcwi (2019), HXB4/IpcvMcwi (2020), HXB20/IpcvMcwi (2020), HXB10/IpcvMcwi (2019), FXLE16/Stm (2020), F344/NCrl (2019), ACI/N (2020), SS/JrHsdMcwi (MCW), GH/OmrMcwi (MCW), FHH/EurMcwi (MCW), COP/CrCrl (MCW & UW), ACI/EurMcwi (MCW), SS/JrHsdMcwi (2019)
13 74462287 74462288 G T snv WKY/NCrl (2019), WKY/N (2020), SS/JrHsdMcwi (2019), SHR/OlalpcvMcwi (2019), HXB4/IpcvMcwi (2020), HXB20/IpcvMcwi (2020), HXB10/IpcvMcwi (2019), FXLE16/Stm (2020), F344/NCrl (2019), ACI/N (2020), WKY/NHsd (RGD), LEW/Crl (RGD), SS/JrHsdMcwi (MCW), GH/OmrMcwi (MCW), FHL/EurMcwi (MCW), FHH/EurMcwi (MCW), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW)
13 74462305 74462306 G C snv FXLE16/Stm (2020), F344/NCrl (2019), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEW/Crl (2019), M520/N (2020), SHRSP/A3NCrl (2019), SS/JrHsdMcwi (2019), WKY/NCrl (2019), WKY/N (2020), WN/N (2020), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), WKY/NCrl (RGD), WKY/NHsd (RGD), ACI/N (2020), DA/OlaHsd (2019), HXB20/IpcvMcwi (2020)
13 74462333 74462334 T C snv ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), BBDP/Wor (RGD), ACI/N (2020), DA/OlaHsd (2019), F344/NCrl (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEW/Crl (2019), M520/NRrrcMcwi (2019), M520/N (2020), MWF/Hsd (2019), SHRSP/A3NCrl (2019), SS/JrHsdMcwi (2019), WKY/NCrl (2019), WKY/N (2020), WN/N (2020)
13 74462345 74462346 A C snv LEW/Crl (2019), HXB4/IpcvMcwi (2020), M520/N (2020), MWF/Hsd (2019), SHRSP/A3NCrl (2019), SS/JrHsdMcwi (2019), WKY/NCrl (2019), WKY/N (2020), WN/N (2020), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), BBDP/Wor (RGD), SHRSP/Gcrc (RGD), ACI/EurMcwi (2019), ACI/N (2020), DA/OlaHsd (2019), F344/DuCrl (2019), F344/NCrl (2019), F344/Stm (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), M520/NRrrcMcwi (2019)
13 74462351 74462352 T C snv ACI/EurMcwi (MCW), WN/N (2020), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), M520/N (MCW), BBDP/Wor (RGD), SHRSP/Gcrc (RGD), ACI/EurMcwi (2019), ACI/N (2020), DA/OlaHsd (2019), F344/DuCrl (2019), F344/NCrl (2019), F344/Stm (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEW/Crl (2019), M520/NRrrcMcwi (2019), M520/N (2020), MWF/Hsd (2019), SHRSP/A3NCrl (2019), SS/JrHsdMcwi (2019), WKY/NCrl (2019), WKY/N (2020), COP/CrCrl (MCW & UW)
13 74462356 74462357 G A snv ACI/EurMcwi (MCW), WN/N (2020), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), BBDP/Wor (RGD), SHRSP/Gcrc (RGD), ACI/EurMcwi (2019), ACI/N (2020), BXH2/CubMcwi (2020), F344/DuCrl (2019), F344/NCrl (2019), F344/Stm (2019), FXLE16/Stm (2020), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), MWF/Hsd (2019), SHRSP/A3NCrl (2019), WKY/NCrl (2019), WKY/N (2020), COP/CrCrl (MCW & UW)
13 74462399 74462400 A G snv ACI/EurMcwi (MCW), WN/N (2020), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), F344/NCrl (RGD), LEW/Crl (RGD), LEW/NCrlBR (RGD), SHR/NHsd (RGD), SHRSP/Gcrc (RGD), WKY/Gcrc (RGD), ACI/EurMcwi (2019), ACI/N (2020), BXH2/CubMcwi (2020), BXH3/CubMcwi (2020), F344/DuCrl (2019), F344/NCrl (2019), F344/N (2020), F344/Stm (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEW/Crl (2019), LEXF3/Stm (2020), M520/NRrrcMcwi (2019), M520/N (2020), MWF/Hsd (2019), SHRSP/A3NCrl (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), COP/CrCrl (MCW & UW)
13 74462408 74462409 G A snv ACI/EurMcwi (MCW), WN/N (2020), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), F344/NCrl (RGD), LEW/Crl (RGD), LEW/NCrlBR (RGD), SHR/NHsd (RGD), SHRSP/Gcrc (RGD), WKY/Gcrc (RGD), ACI/EurMcwi (2019), ACI/N (2020), BXH2/CubMcwi (2020), BXH3/CubMcwi (2020), F344/DuCrl (2019), F344/NCrl (2019), F344/N (2020), F344/Stm (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEW/Crl (2019), LEXF3/Stm (2020), M520/NRrrcMcwi (2019), M520/N (2020), MWF/Hsd (2019), SHRSP/A3NCrl (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), COP/CrCrl (MCW & UW)
13 74462433 74462434 A T snv F344/NCrl (RGD), LEW/NCrlBR (RGD), SHRSP/Gcrc (RGD), BXH3/CubMcwi (2020), F344/N (2020), M520/N (2020), WAG/RijCrl (2020), WKY/NCrl (2019), WN/N (2020), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW)
13 74462452 74462453 C T snv WN/N (2020), WAG/RijCrl (2020), SHR/OlalpcvMcwi (2019), M520/N (2020), LEW/Crl (2019), BBDP/Wor (RGD), F344/N (2020), WKY/NCrl (RGD), SHRSP/Gcrc (RGD), LEW/NCrlBR (RGD), F344/NCrl (RGD), F344/Stm (2019)
13 74462453 74462454 A G snv WAG/RijCrl (2020), WN/N (2020), SHR/OlalpcvMcwi (2019), M520/N (2020), LEW/Crl (2019), F344/Stm (2019), F344/N (2020), WKY/NCrl (RGD), SHRSP/Gcrc (RGD), LEW/NCrlBR (RGD), F344/NCrl (RGD), BBDP/Wor (RGD)
13 74462474 74462475 A G snv ACI/EurMcwi (RGD), F344/NCrl (RGD), LEW/NCrlBR (RGD), SHRSP/Gcrc (RGD), WKY/NCrl (RGD), WN/N (2020), F344/Stm (2019), LEW/Crl (2019), M520/N (2020), SHR/OlalpcvMcwi (2019), WAG/RijCrl (2020), F344/N (2020)
13 74462485 74462486 G A snv ACI/EurMcwi (RGD), F344/NCrl (RGD), LEW/NCrlBR (RGD), SHRSP/Gcrc (RGD), WKY/NCrl (RGD), F344/N (2020), F344/Stm (2019), LEW/Crl (2019), M520/N (2020), SHR/OlalpcvMcwi (2019), WAG/RijCrl (2020), WN/N (2020)
13 74462486 74462487 A G snv ACI/EurMcwi (RGD), F344/NCrl (RGD), LEW/NCrlBR (RGD), SHRSP/Gcrc (RGD), WKY/NCrl (RGD), WN/N (2020), F344/Stm (2019), LEW/Crl (2019), M520/N (2020), SHR/OlalpcvMcwi (2019), WAG/RijCrl (2020), F344/N (2020)
13 74462537 74462538 A T snv ACI/EurMcwi (MCW), WN/N (2020), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), LEW/NCrlBR (RGD), SHRSP/Gcrc (RGD), WKY/NCrl (RGD), WKY/Gcrc (RGD), WKY/NHsd (RGD), ACI/N (2020), BXH2/CubMcwi (2020), BXH3/CubMcwi (2020), DA/OlaHsd (2019), F344/DuCrl (2019), F344/NCrl (2019), F344/N (2020), F344/Stm (2019), FHH/EurMcwi (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), LEW/Crl (2019), LEXF3/Stm (2020), M520/NRrrcMcwi (2019), M520/N (2020), MR/N (2020), MWF/Hsd (2019), PVG/Seac (2019), SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), WKY/N (2020), COP/CrCrl (MCW & UW)
13 74462554 74462555 C T snv ACI/EurMcwi (MCW), WN/N (2020), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), LEW/NCrlBR (RGD), SHRSP/Gcrc (RGD), WKY/NCrl (RGD), WKY/Gcrc (RGD), WKY/NHsd (RGD), ACI/N (2020), BXH2/CubMcwi (2020), BXH3/CubMcwi (2020), DA/OlaHsd (2019), F344/DuCrl (2019), F344/NCrl (2019), F344/N (2020), F344/Stm (2019), FHH/EurMcwi (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), LEW/Crl (2019), LEXF3/Stm (2020), M520/NRrrcMcwi (2019), M520/N (2020), MR/N (2020), MWF/Hsd (2019), PVG/Seac (2019), SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), WKY/N (2020), COP/CrCrl (MCW & UW)
13 74462598 74462599 T A snv M520/NRrrcMcwi (2019), M520/N (2020), MR/N (2020), MWF/Hsd (2019), PVG/Seac (2019), SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), WKY/N (2020), WN/N (2020), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), WN/N (MCW), LEW/NCrlBR (RGD), SHRSP/Gcrc (RGD), WKY/NCrl (RGD), WKY/Gcrc (RGD), WKY/NHsd (RGD), ACI/EurMcwi (2019), ACI/N (2020), BXH2/CubMcwi (2020), BXH3/CubMcwi (2020), DA/OlaHsd (2019), F344/DuCrl (2019), F344/NCrl (2019), F344/N (2020), FHH/EurMcwi (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), LEW/Crl (2019), LEXF3/Stm (2020)
13 74462672 74462673 C T snv WKY/N (2020), WN/N (2020), ACI/EurMcwi (2019), ACI/N (2020), F344/NCrl (2019), F344/N (2020), F344/Stm (2019), FHH/EurMcwi (2019), FXLE16/Stm (2020), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), LEXF3/Stm (2020), MR/N (2020), SHRSP/A3NCrl (2019), SHR/OlalpcvMcwi (2019), WAG/RijCrl (2020)
13 74462692 74462693 G C snv ACI/EurMcwi (MCW), WKY/N (2020), WAG/RijCrl (2020), SS/JrHsdMcwi (2019), SHR/OlalpcvMcwi (2019), SHRSP/A3NCrl (2019), MR/N (2020), M520/N (2020), M520/NRrrcMcwi (2019), LEXF3/Stm (2020), HXB2/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), HXB10/IpcvMcwi (2019), GK/FarMcwi (2019), FXLE16/Stm (2020), FHH/EurMcwi (2019), F344/Stm (2019), F344/N (2020), F344/NCrl (2019), DA/OlaHsd (2019), BXH2/CubMcwi (2020), ACI/EurMcwi (2019), F344/NCrl (RGD), SS/JrHsdMcwi (MCW), WN/N (2020), FHH/EurMcwi (MCW)
13 74462695 74462696 C T snv WN/N (2020), ACI/EurMcwi (MCW), WAG/RijCrl (2020), SS/JrHsdMcwi (2019), SHR/OlalpcvMcwi (2019), SHRSP/A3NCrl (2019), MR/N (2020), M520/N (2020), M520/NRrrcMcwi (2019), LEXF3/Stm (2020), HXB2/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), HXB10/IpcvMcwi (2019), GK/FarMcwi (2019), FXLE16/Stm (2020), FHH/EurMcwi (2019), F344/Stm (2019), F344/N (2020), F344/NCrl (2019), DA/OlaHsd (2019), BXH2/CubMcwi (2020), ACI/EurMcwi (2019), SS/JrHsdMcwi (MCW), WKY/N (2020)
13 74462735 74462736 T C snv FXLE16/Stm (2020), GK/FarMcwi (2019), HXB10/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEXF3/Stm (2020), M520/NRrrcMcwi (2019), M520/N (2020), MR/N (2020), SHRSP/A3NCrl (2019), SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/N (2020), WN/N (2020), ACI/EurMcwi (MCW), COP/CrCrl (MCW & UW), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), ACI/EurMcwi (2019), DA/OlaHsd (2019), F344/DuCrl (2019), F344/NCrl (2019), F344/N (2020), F344/Stm (2019), FHH/EurMcwi (2019)
13 74462762 74462763 A T snv ACI/EurMcwi (MCW), WKY/N (2020), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), ACI/EurMcwi (RGD), SHRSP/Gcrc (RGD), F344/DuCrl (2019), F344/NCrl (2019), FHH/EurMcwi (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB10/IpcvMcwi (2019), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEW/Crl (2019), M520/N (2020), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), COP/CrCrl (MCW & UW)
13 74462773 74462774 C A snv ACI/EurMcwi (MCW), WN/N (2020), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), ACI/EurMcwi (RGD), SHRSP/Gcrc (RGD), WKY/Gcrc (RGD), ACI/EurMcwi (2019), F344/DuCrl (2019), F344/NCrl (2019), F344/Stm (2019), FHH/EurMcwi (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB10/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEW/Crl (2019), M520/NRrrcMcwi (2019), M520/N (2020), SHRSP/A3NCrl (2019), SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), WKY/N (2020), COP/CrCrl (MCW & UW)
13 74462798 74462799 A G snv ACI/EurMcwi (MCW), WN/N (2020), FHH/EurMcwi (MCW), FHL/EurMcwi (MCW), GH/OmrMcwi (MCW), SS/JrHsdMcwi (MCW), ACI/EurMcwi (RGD), SHRSP/Gcrc (RGD), WKY/Gcrc (RGD), ACI/EurMcwi (2019), F344/DuCrl (2019), F344/NCrl (2019), F344/Stm (2019), FHH/EurMcwi (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB10/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEW/Crl (2019), M520/NRrrcMcwi (2019), M520/N (2020), SHRSP/A3NCrl (2019), SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), WKY/N (2020), COP/CrCrl (MCW & UW)


Assembly: Rnor_5.0

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain
13 79382415 79382416 G T snv SBN/Ygl (MCW), SBN/Ygl (KNAW), BDIX/NemOda (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), KFRS3B/Kyo (KyushuU)
13 79382427 79382428 G C snv NIG-III/Hok (KyushuU), DOB/Oda (KyushuU), LE/OrlBarth (UDEL), SDLEF7/Barth (UDEL)
13 79382430 79382431 C T snv LE/OrlBarth (UDEL), NIG-III/Hok (KyushuU), DOB/Oda (KyushuU), SDLEF7/Barth (UDEL)
13 79382460 79382461 G A snv NIG-III/Hok (KyushuU), LE/OrlBarth (UDEL)
13 79382468 79382469 A G snv DOB/Oda (KyushuU), NIG-III/Hok (KyushuU), LE/OrlBarth (UDEL), LEC/Tj (KyushuU)
13 79382553 79382554 T A snv HTX/Kyo (KyushuU), ZF (KyushuU), DOB/Oda (KyushuU), NIG-III/Hok (KyushuU)
13 79382564 79382565 G T snv DOB/Oda (KyushuU), ZF (KyushuU), NIG-III/Hok (KyushuU)
13 79382582 79382583 G C snv ZF (KyushuU), DOB/Oda (KyushuU), BDIX/NemOda (KyushuU), NIG-III/Hok (KyushuU)
13 79382610 79382611 T C snv LEC/Tj (KyushuU), BDIX/NemOda (KyushuU), DOB/Oda (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), NIG-III/Hok (KyushuU), HTX/Kyo (KyushuU)
13 79382622 79382623 A C snv LE/OrlBarth (UDEL)
13 79382628 79382629 T C snv LE/OrlBarth (UDEL), NIG-III/Hok (KyushuU), HTX/Kyo (KyushuU), HWY/Slc (KyushuU), LEC/Tj (KyushuU), BDIX/NemOda (KyushuU), DOB/Oda (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU)
13 79382633 79382634 G A snv SDLEF7/Barth (UDEL), BDIX.Cg-Tal/NemOda (KyushuU), BDIX/NemOda (KyushuU), LEC/Tj (KyushuU), RCS/Kyo (KyushuU), HTX/Kyo (KyushuU), LE/OrlBarth (UDEL)
13 79382676 79382677 A G snv BDIX.Cg-Tal/NemOda (KyushuU), DOB/Oda (KyushuU), HWY/Slc (KyushuU), RCS/Kyo (KyushuU), F344/NSlc (KyushuU), HTX/Kyo (KyushuU), F344/DuCrlCrlj (KyushuU), NIG-III/Hok (KyushuU), SDLEF7/Barth (UDEL), LE/OrlBarth (UDEL)
13 79382685 79382686 G A snv DOB/Oda (KyushuU), F344/Jcl (KyushuU), LEC/Tj (KyushuU), HWY/Slc (KyushuU), F344/Stm (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), F344/NSlc (KyushuU), HTX/Kyo (KyushuU), NIG-III/Hok (KyushuU), LE/OrlBarth (UDEL), SDLEF7/Barth (UDEL), RCS/Kyo (KyushuU)
13 79382710 79382711 A T snv SDLEF7/Barth (UDEL), LE/OrlBarth (UDEL), BDIX.Cg-Tal/NemOda (KyushuU), DOB/Oda (KyushuU), F344/Jcl (KyushuU), LEC/Tj (KyushuU), HWY/Slc (KyushuU), F344/Stm (KyushuU), RCS/Kyo (KyushuU), NIG-III/Hok (KyushuU), F344/DuCrlCrlj (KyushuU), HTX/Kyo (KyushuU), F344/NSlc (KyushuU)
13 79382729 79382730 C T snv HTX/Kyo (KyushuU)
13 79382730 79382731 A G snv HTX/Kyo (KyushuU)
13 79382742 79382743 G A snv HTX/Kyo (KyushuU), NIG-III/Hok (KyushuU)
13 79382751 79382752 A G snv HTX/Kyo (KyushuU), NIG-III/Hok (KyushuU)
13 79382762 79382763 G A snv HTX/Kyo (KyushuU)
13 79382763 79382764 A G snv HTX/Kyo (KyushuU)
13 79382814 79382815 A T snv ZFDM (KyushuU), SDLEF7/Barth (UDEL), BDIX.Cg-Tal/NemOda (KyushuU), DOB/Oda (KyushuU), BDIX/NemOda (KyushuU), F344/Jcl (KyushuU), LEC/Tj (KyushuU), HWY/Slc (KyushuU), F344/Stm (KyushuU), RCS/Kyo (KyushuU), F344/NSlc (KyushuU), HTX/Kyo (KyushuU), F344/DuCrlCrlj (KyushuU), NIG-III/Hok (KyushuU), LE/OrlBarth (UDEL), ZF (KyushuU)
13 79382831 79382832 C T snv ZF (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), DOB/Oda (KyushuU), BDIX/NemOda (KyushuU), F344/Jcl (KyushuU), LEC/Tj (KyushuU), HWY/Slc (KyushuU), F344/Stm (KyushuU), RCS/Kyo (KyushuU), F344/NSlc (KyushuU), HTX/Kyo (KyushuU), F344/DuCrlCrlj (KyushuU), NIG-III/Hok (KyushuU), Crl:SD (UDEL), LE/OrlBarth (UDEL), ZFDM (KyushuU), SDLEF7/Barth (UDEL)
13 79382875 79382876 T A snv SDLEF7/Barth (UDEL), LE/OrlBarth (UDEL), Crl:SD (UDEL), NIG-III/Hok (KyushuU), F344/DuCrlCrlj (KyushuU), HTX/Kyo (KyushuU), F344/NSlc (KyushuU), RCS/Kyo (KyushuU), F344/Stm (KyushuU), HWY/Slc (KyushuU), LEC/Tj (KyushuU), F344/Jcl (KyushuU), BDIX/NemOda (KyushuU), DOB/Oda (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), ZF (KyushuU), ZFDM (KyushuU)
13 79382949 79382950 C T snv F344/NSlc (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), LEC/Tj (KyushuU), RCS/Kyo (KyushuU)
13 79382969 79382970 G C snv F344/NSlc (KyushuU), RCS/Kyo (KyushuU), HWY/Slc (KyushuU), LEC/Tj (KyushuU), NIG-III/Hok (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU)
13 79382972 79382973 C T snv LEC/Tj (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), HWY/Slc (KyushuU), RCS/Kyo (KyushuU), NIG-III/Hok (KyushuU)
13 79383012 79383013 T C snv BDIX.Cg-Tal/NemOda (KyushuU), NIG-III/Hok (KyushuU), F344/Stm (KyushuU), LEC/Tj (KyushuU), F344/Jcl (KyushuU), DOB/Oda (KyushuU), SDLEF7/Barth (UDEL), LE/OrlBarth (UDEL), Crl:SD (UDEL), RCS/Kyo (KyushuU), HTX/Kyo (KyushuU), F344/NSlc (KyushuU)
13 79383039 79383040 A T snv Crl:SD (UDEL), LE/OrlBarth (UDEL), SDLEF7/Barth (UDEL)
13 79383050 79383051 C A snv SDLEF7/Barth (UDEL), BDIX.Cg-Tal/NemOda (KyushuU), ZF (KyushuU), LE/OrlBarth (UDEL), Crl:SD (UDEL), NIG-III/Hok (KyushuU), HTX/Kyo (KyushuU), F344/NSlc (KyushuU), RCS/Kyo (KyushuU), F344/Stm (KyushuU), LEC/Tj (KyushuU), F344/Jcl (KyushuU), DOB/Oda (KyushuU)
13 79383075 79383076 A G snv F344/NSlc (KyushuU), HTX/Kyo (KyushuU), NIG-III/Hok (KyushuU), Crl:SD (UDEL), LE/OrlBarth (UDEL), RCS/Kyo (KyushuU), ZF (KyushuU), BDIX.Cg-Tal/NemOda (KyushuU), F344/Jcl (KyushuU), LEC/Tj (KyushuU), F344/Stm (KyushuU), SDLEF7/Barth (UDEL)


Assembly: RGSC_v3.4

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain
13 72044879 72044880 G T snv SBN/Ygl (ICL)
13 72045092 72045093 T C snv M520/N (KNAW)
13 72045339 72045340 T A snv WN/N (KNAW)


Assembly: mRatBN7.2

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain
13 68969067 68969068 G A snv ACI/EurMcwi (2019), WN/N (2020), BXH2/CubMcwi (2020), F344/DuCrl (2019), F344/NCrl (2019), F344/Stm (2019), FXLE16/Stm (2020), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), MR/N (2020), MWF/Hsd (2019), SHRSP/A3NCrl (2019), WKY/NCrl (2019), ACI/N (2020)
13 68969163 68969164 C T snv M520/N (2020), F344/N (2020), SHR/OlalpcvMcwi (2019), WAG/RijCrl (2020), WN/N (2020)
13 68969164 68969165 A G snv F344/N (2020), M520/N (2020), SHR/OlalpcvMcwi (2019), WAG/RijCrl (2020), WN/N (2020)
13 68969185 68969186 A G snv M520/N (2020), F344/N (2020), SHR/OlalpcvMcwi (2019), WN/N (2020), WAG/RijCrl (2020)
13 68969196 68969197 G A snv SHR/OlalpcvMcwi (2019), WAG/RijCrl (2020), M520/N (2020), F344/N (2020), WN/N (2020)
13 68969197 68969198 A G snv WAG/RijCrl (2020), SHR/OlalpcvMcwi (2019), M520/N (2020), F344/N (2020), WN/N (2020)
13 68969248 68969249 A T snv WKY/N (2020), WN/N (2020), WAG/RijCrl (2020), SS/JrHsdMcwi (2019), SHR/OlalpcvMcwi (2019), PVG/Seac (2019), MWF/Hsd (2019), MR/N (2020), M520/N (2020), M520/NRrrcMcwi (2019), LEXF3/Stm (2020), LEW/Crl (2019), HXB2/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), GK/FarMcwi (2019), FXLE16/Stm (2020), FHH/EurMcwi (2019), F344/Stm (2019), F344/N (2020), F344/NCrl (2019), F344/DuCrl (2019), DA/OlaHsd (2019), BXH3/CubMcwi (2020), BXH2/CubMcwi (2020), ACI/N (2020), WKY/NCrl (2019)
13 68969265 68969266 C T snv WN/N (2020), WKY/N (2020), WKY/NCrl (2019), WAG/RijCrl (2020), SS/JrHsdMcwi (2019), SHR/OlalpcvMcwi (2019), PVG/Seac (2019), MWF/Hsd (2019), MR/N (2020), M520/N (2020), M520/NRrrcMcwi (2019), LEXF3/Stm (2020), LEW/Crl (2019), HXB2/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), GK/FarMcwi (2019), FXLE16/Stm (2020), FHH/EurMcwi (2019), F344/Stm (2019), F344/N (2020), F344/NCrl (2019), F344/DuCrl (2019), DA/OlaHsd (2019), BXH3/CubMcwi (2020), ACI/N (2020), BXH2/CubMcwi (2020)
13 68969309 68969310 T A snv DA/OlaHsd (2019), WKY/N (2020), WKY/NCrl (2019), WAG/RijCrl (2020), SS/JrHsdMcwi (2019), SHR/OlalpcvMcwi (2019), PVG/Seac (2019), MWF/Hsd (2019), MR/N (2020), M520/N (2020), M520/NRrrcMcwi (2019), LEXF3/Stm (2020), LEW/Crl (2019), HXB2/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), GK/FarMcwi (2019), ACI/EurMcwi (2019), ACI/N (2020), BXH2/CubMcwi (2020), BXH3/CubMcwi (2020), WN/N (2020), F344/DuCrl (2019), F344/NCrl (2019), F344/N (2020), FHH/EurMcwi (2019), FXLE16/Stm (2020)
13 68969383 68969384 C T snv WN/N (2020), ACI/EurMcwi (2019), WKY/NCrl (2019), WAG/RijCrl (2020), SHR/OlalpcvMcwi (2019), SHRSP/A3NCrl (2019), MR/N (2020), LEXF3/Stm (2020), HXB20/IpcvMcwi (2020), FXLE16/Stm (2020), FHH/EurMcwi (2019), F344/Stm (2019), F344/N (2020), F344/NCrl (2019), ACI/N (2020), WKY/N (2020)
13 68969403 68969404 G C snv ACI/EurMcwi (2019), DA/OlaHsd (2019), F344/NCrl (2019), F344/N (2020), F344/Stm (2019), FHH/EurMcwi (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB10/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), LEXF3/Stm (2020), M520/NRrrcMcwi (2019), M520/N (2020), MR/N (2020), SHRSP/A3NCrl (2019), SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), WKY/N (2020), WN/N (2020)
13 68969406 68969407 C T snv ACI/EurMcwi (2019), WN/N (2020), F344/NCrl (2019), F344/N (2020), F344/Stm (2019), FHH/EurMcwi (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB10/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), LEXF3/Stm (2020), M520/NRrrcMcwi (2019), M520/N (2020), MR/N (2020), SHRSP/A3NCrl (2019), SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), WKY/N (2020), DA/OlaHsd (2019)
13 68969446 68969447 T C snv GK/FarMcwi (2019), HXB10/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEXF3/Stm (2020), M520/NRrrcMcwi (2019), M520/N (2020), MR/N (2020), SHRSP/A3NCrl (2019), SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), WKY/N (2020), WN/N (2020), ACI/EurMcwi (2019), DA/OlaHsd (2019), F344/DuCrl (2019), F344/NCrl (2019), F344/N (2020), F344/Stm (2019), FHH/EurMcwi (2019), FXLE16/Stm (2020)
13 68969473 68969474 A T snv WAG/RijCrl (2020), SS/JrHsdMcwi (2019), M520/N (2020), LEW/Crl (2019), HXB4/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), WKY/N (2020), HXB10/IpcvMcwi (2019), GK/FarMcwi (2019), FXLE16/Stm (2020), FHH/EurMcwi (2019), F344/NCrl (2019), F344/DuCrl (2019), HXB20/IpcvMcwi (2020)
13 68969484 68969485 C A snv SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), WKY/N (2020), WN/N (2020), SHRSP/A3NCrl (2019), M520/N (2020), M520/NRrrcMcwi (2019), LEW/Crl (2019), HXB4/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), HXB10/IpcvMcwi (2019), GK/FarMcwi (2019), FXLE16/Stm (2020), FHH/EurMcwi (2019), F344/Stm (2019), F344/NCrl (2019), ACI/EurMcwi (2019), F344/DuCrl (2019)
13 68969509 68969510 A G snv ACI/EurMcwi (2019), WN/N (2020), F344/NCrl (2019), F344/Stm (2019), FHH/EurMcwi (2019), FXLE16/Stm (2020), GK/FarMcwi (2019), HXB10/IpcvMcwi (2019), HXB20/IpcvMcwi (2020), HXB2/IpcvMcwi (2019), HXB4/IpcvMcwi (2020), LEW/Crl (2019), M520/NRrrcMcwi (2019), M520/N (2020), SHRSP/A3NCrl (2019), SHR/OlalpcvMcwi (2019), SS/JrHsdMcwi (2019), WAG/RijCrl (2020), WKY/NCrl (2019), WKY/N (2020), F344/DuCrl (2019)


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1598128 AgrOrtholog
BioCyc Gene G2FUF-17800 BioCyc
Ensembl Genes ENSRNOG00000004712 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000059194 UniProtKB/TrEMBL
  ENSRNOP00000073625 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000065801 UniProtKB/TrEMBL
  ENSRNOT00000079152 UniProtKB/TrEMBL
Gene3D-CATH 3.90.215.10 UniProtKB/TrEMBL
InterPro Fibrinogen-like_C UniProtKB/TrEMBL
  Fibrinogen_a/b/g_C_1 UniProtKB/TrEMBL
  Fibrinogen_a/b/g_C_dom UniProtKB/TrEMBL
  Fibrinogen_CS UniProtKB/TrEMBL
KEGG Report rno:679942 UniProtKB/TrEMBL
NCBI Gene 679942 ENTREZGENE
Pfam Fibrinogen_C UniProtKB/TrEMBL
PhenoGen Angptl1 PhenoGen
PROSITE FIBRINOGEN_C_1 UniProtKB/TrEMBL
  FIBRINOGEN_C_2 UniProtKB/TrEMBL
SMART FBG UniProtKB/TrEMBL
Superfamily-SCOP SSF56496 UniProtKB/TrEMBL
UniProt A0A0G2K603_RAT UniProtKB/TrEMBL
  D4A593_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-07-08 Angptl1  angiopoietin-like 1  LOC684489  similar to angiopoietin-like 1  Data Merged 1643240 APPROVED
2008-03-05 Angptl1  angiopoietin-like 1  LOC679942  similar to angiopoietin-like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC679942  similar to angiopoietin-like 1      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC684489  similar to angiopoietin-like 1      Symbol and Name status set to provisional 70820 PROVISIONAL