Gene: Ptx3 (pentraxin 3) Rattus norvegicus
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Symbol: Ptx3
Name: pentraxin 3
Description: ENCODES a protein that exhibits (1->3)-beta-D-glucan binding (ortholog); complement component C1q binding (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); innate immune response (ortholog); negative regulation by host of viral exo-alpha-sialidase activity (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); pulmonary fibrosis (ortholog); skin disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); INTERACTS WITH 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC689388; pentraxin 3, long; pentraxin related; pentraxin related gene; pentraxin-related protein PTX3; similar to Pentraxin-related protein PTX3 precursor (Pentaxin-related protein PTX3) (Tumor necrosis factor-inducible protein TSG-14)
Orthologs:
Homo sapiens (human) : PTX3 (pentraxin 3)  HGNC  Alliance
Mus musculus (house mouse) : Ptx3 (pentraxin related gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ptx3 (pentraxin 3)
Pan paniscus (bonobo/pygmy chimpanzee) : PTX3 (pentraxin 3)
Canis lupus familiaris (dog) : PTX3 (pentraxin 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ptx3 (pentraxin 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02158,097,843 - 158,103,653 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02177,457,263 - 177,463,073 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42156,089,917 - 156,095,726 (+)NCBIRGSC3.4rn4RGSC3.4
Celera2144,894,946 - 144,900,755 (+)NCBICelera
Cytogenetic Map2q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ptx3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1593476
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2018-10-09
Status: ACTIVE