Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Clic3 (chloride intracellular channel 3) Rattus norvegicus
Analyze
Symbol: Clic3
Name: chloride intracellular channel 3
RGD ID: 1307249
Description: Predicted to have chloride channel activity. Predicted to be involved in chloride transport. Predicted to localize to cytoplasm and nuclear body. Orthologous to human CLIC3 (chloride intracellular channel 3); INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: chloride intracellular channel protein 3; LOC296566; MGC109225
Orthologs:
Homo sapiens (human) : CLIC3 (chloride intracellular channel 3)  HGNC  Alliance
Mus musculus (house mouse) : Clic3 (chloride intracellular channel 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clic3 (chloride intracellular channel 3)
Pan paniscus (bonobo/pygmy chimpanzee) : CLIC3 (chloride intracellular channel 3)
Canis lupus familiaris (dog) : CLIC3 (chloride intracellular channel 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clic3 (chloride intracellular channel 3)
Sus scrofa (pig) : CLIC3 (chloride intracellular channel 3)
Chlorocebus sabaeus (African green monkey) : CLIC3 (chloride intracellular channel 3)
Heterocephalus glaber (naked mole-rat) : Clic3 (chloride intracellular channel 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.032,675,732 - 2,678,248 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl32,676,296 - 2,680,565 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.032,657,743 - 2,659,664 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.433,622,894 - 3,624,805 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.133,623,545 - 3,624,807 (+)NCBI
Celera33,097,212 - 3,099,123 (+)NCBICelera
Cytogenetic Map3p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Clic3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307249
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.