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Pathways
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Gene: Gpc1 (glypican 1) Rattus norvegicus
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Symbol: Gpc1
Name: glypican 1
Description: Exhibits collagen V binding activity. Involved in Schwann cell differentiation and myelin assembly. Localizes to the neuronal cell body. Orthologous to human GPC1 (glypican 1); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1,3,5-trinitro-1,3,5-triazinane; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: glypican-1; GPI-anchored cell surface heparan sulfate proteoglycan; HSPG M12; HSPGM12
Orthologs:
Homo sapiens (human) : GPC1 (glypican 1)  HGNC  Alliance
Mus musculus (house mouse) : Gpc1 (glypican 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Gpc1 (glypican 1)
Pan paniscus (bonobo/pygmy chimpanzee) : GPC1 (glypican 1)
Canis lupus familiaris (dog) : GPC1 (glypican 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Gpc1 (glypican 1)
Sus scrofa (pig) : GPC1 (glypican 1)
more info ...
Is Marker For: Strains:   SD  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0999,998,275 - 100,026,818 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0999,664,180 - 99,692,723 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera990,933,123 - 90,960,752 (+)NCBICelera
Cytogenetic Map9q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
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Gene Ontology Annotations
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References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
  
More on Gpc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 61853
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.