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Gene: Ecm2 (extracellular matrix protein 2) Rattus norvegicus
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Symbol: Ecm2
Name: extracellular matrix protein 2
Description: Predicted to have collagen V binding activity and heparin binding activity. Predicted to be involved in extracellular matrix organization and positive regulation of cell-substrate adhesion. Predicted to localize to the interstitial matrix. Orthologous to human ECM2 (extracellular matrix protein 2); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; diuron.
Type: protein-coding
RefSeq Status: MODEL
Also known as: extracellular matrix protein 2, female organ and adipocyte specific; extracellular matrix protein 2-like; LOC100361383
Orthologs:
Homo sapiens (human) : ECM2 (extracellular matrix protein 2)  HGNC  Alliance
Mus musculus (house mouse) : Ecm2 (extracellular matrix protein 2, female organ and adipocyte specific)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ecm2 (extracellular matrix protein 2)
Pan paniscus (bonobo/pygmy chimpanzee) : ECM2 (extracellular matrix protein 2)
Canis lupus familiaris (dog) : ECM2 (extracellular matrix protein 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ecm2 (extracellular matrix protein 2)
Sus scrofa (pig) : ECM2 (extracellular matrix protein 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01715,533,760 - 15,566,403 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1715,533,972 - 15,566,332 (-)Ensembl
Rnor_5.01717,592,210 - 17,624,836 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41721,075,854 - 21,107,455 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1714,850,715 - 14,883,355 (-)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ecm2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2320282
Created: 2010-05-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.