Pur14 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Pur14 (Proteinuria QTL 14) Rattus norvegicus

Symbol: Pur14
Name: Proteinuria QTL 14
RGD ID: 1581553
Previously known as: SUP17
Trait: urine total protein amount   (VT:0000032)    
Measurement Type: urine protein excretion rate   (CMO:0000759)    
LOD Score: 5.3
P Value: 1.0E-4
Variance: 36.7
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2177,979,968 - 16,317,111RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0178,424,467 - 16,620,067RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01710,600,735 - 18,672,009RGDRnor5.0
RGSC_v3.41713,930,240 - 22,447,143RGDRGSC3.4
RGSC_v3.11713,930,241 - 22,447,143RGD
Cross Type: Not Available
Strains Crossed: SBH/Ygl SBN/Ygl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
urine protein excretion rate  IDA 1578625 RGD 

Experimental Condition
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
right nephrectomy  IDA 1578625 RGD 

Measurement Method
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
protein analysis by liquid phase colorimetry with spectrophotometric readout  IDA 1578625 RGD 

Rat Strain
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
SBH/Ygl  IEA 1578625 RGD 
SBN/Ygl  IEA 1578625 RGD 

Vertebrate Trait
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
urine total protein amount  IDA 1578625 RGD 

Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
SBH/Ygl  (IEA)
SBN/Ygl  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic dissection of proteinuria in the Sabra rat. Yagil C, etal., Physiol Genomics. 2006 Mar 13;25(1):121-33. Epub 2006 Jan 3.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3708Slc34a1solute carrier family 34 member 11792188769233852Rat
2612Fgfr4fibroblast growth factor receptor 41794615419476268Rat
70885Dbn1drebrin 11791506089164982Rat
69253Pitx1paired-like homeodomain 11787941348800292Rat
620003Rgs14regulator of G-protein signaling 141792489829263104Rat
2798Hk3hexokinase 31795969509614847Rat
70945Cplx2complexin 2171021957710292835Rat
2831Hrh2histamine receptor H 2171036835510407791Rat
620049Il9interleukin 91781117728114895Rat
69297Camlgcalcium modulating ligand1789926979003576Rat
3796Sykspleen associated tyrosine kinase171260461512678437Rat
628769Pdlim7PDZ and LIM domain 71791245659139814Rat
621022Iars1isoleucyl-tRNA synthetase 1171494091914987277Rat
3179Ninj1ninjurin 1171545280415461684Rat
621353Cltbclathrin, light chain B171000151210019201Rat
620972Nfil3nuclear factor, interleukin 3 regulated171228049912295728Rat
621755Unc5aunc-5 netrin receptor A1796148419670558Rat
708480Ddx46DEAD-box helicase 461789441978988476Rat
621462Macroh2a1macroH2A.1 histone1784793318542071Rat
3167Neurog1neurogenin 11783628788364397Rat
620991Secisbp2SECIS binding protein 2171353851313569573Rat
2518Drd1dopamine receptor D1171054044010544971Rat
69348Shc3SHC adaptor protein 3171365224713772710Rat
628624Mxd3Max dimerization protein 31793014309305156Rat
70992Sncbsynuclein, beta1798468029855013Rat
621818Omdosteomodulin171506021715068441Rat
61986Grk6G protein-coupled receptor kinase 61791770189192644Rat
1303298Arl10ADP-ribosylation factor like GTPase 10171003020910038664Rat
3116Msx2msh homeobox 2171109721411102879Rat
1305580Diras2DIRAS family GTPase 2171273004012761511Rat
1304696Txndc15thioredoxin domain containing 151788980748910538Rat
1305555Fbxl21F-box and leucine-rich repeat protein 211780604128077415Rat
1305700Catsper3cation channel, sperm associated 31788101228840881Rat
1306058Card19caspase recruitment domain family, member 19171543257215445318Rat
1307748Nsd1nuclear receptor binding SET domain protein 11793119639426373Rat
1307009Uimc1ubiquitin interaction motif containing 11795237939592810Rat
1304631Zfp169zinc finger protein 169171613920416167242Rat
1307406Cxcl14C-X-C motif chemokine ligand 141783179338325956Rat
1306643Fam120afamily with sequence similarity 120A171568423315774964Rat
1306087AuhAU RNA binding methylglutaconyl-CoA hydratase171232952212424896Rat
1307212Rnf44ring finger protein 441799199829934376Rat
1305727Nop16NOP16 nucleolar protein171002295010027867Rat
1306577Faf2Fas associated factor family member 21799472169989474Rat
620017Tgfbitransforming growth factor, beta induced1779556037984903Rat
1310884Barx1BARX homeobox 1171599041215993887Rat
1307284Wnk2WNK lysine deficient protein kinase 2171550367215612479Rat
1309551Nol8nucleolar protein 8171499039415013784Rat
1307627Tmed9transmembrane p24 trafficking protein 91790296469034160Rat
1309691Higd2aHIG1 hypoxia inducible domain family, member 2A171002185310022777Rat
1560576Cdhr2cadherin-related family member 21798768539913356Rat
1311271Ippkinositol-pentakisphosphate 2-kinase171519019115235203Rat
1549776Aspnasporin171507991015104369Rat
1309214B4galt7beta-1,4-galactosyltransferase 71790185149027591Rat
1305228Phf2PHD finger protein 2171578322115851209Rat
1308171Ognosteoglycin171503206915052626Rat
735093Bicd2BICD cargo adaptor 2171525977315304889Rat
1308482Sfxn1sideroflexin 1171048625010522640Rat
1310933Susd3sushi domain containing 3171540084515417851Rat
1308082Prelid1PRELI domain containing 11793053499308389Rat
1307140Sptlc1serine palmitoyltransferase, long chain base subunit 1171187724911916295Rat
1309112Rab24RAB24, member RAS oncogene family1793083639310568Rat
1308762Gprin1G protein-regulated inducer of neurite outgrowth 11798636419876832Rat
1305404Lect2leukocyte cell-derived chemotaxin 21780447598050983Rat
1311758Ddx41DEAD-box helicase 411791029269108415Rat
1311725Fgd3FYVE, RhoGEF and PH domain containing 3171532484815387271Rat
1308965Lman2lectin, mannose-binding 21792692369286923Rat
1308068Zfp346zinc finger protein 3461794937899523681Rat
1305275Ror2receptor tyrosine kinase-like orphan receptor 2171197283012148152Rat
1306210Spin1spindlin 1171405568514105366Rat
1310554Sema4dsemaphorin 4D171343032413537146Rat
1307698Ptpdc1protein tyrosine phosphatase domain containing 1171602896416076512Rat
1562024RGD1562024RGD15620241781655748172887Rat
1566033RGD1566033similar to BC003940 protein171012156810121915Rat
1561671Uqcc1-ps1ubiquinol-cytochrome c reductase complex assembly factor 1, pseudogene 1171193602611936668Rat
1561898Prr7proline rich 7 (synaptic)1791643759173669Rat
1311840Dok3docking protein 31791096339115188Rat
1311669Thoc3THO complex subunit 3171014318410152375Rat
1311681TifabTIFA inhibitor1784334068436541Rat
1562047Cks2CDC28 protein kinase regulatory subunit 2171357061113575770Rat
1311796Gadd45ggrowth arrest and DNA-damage-inducible, gamma171337684213378587Rat
1311167Tspan17tetraspanin 171798192129826851Rat
1562335Fam193bfamily with sequence similarity 193, member B1790668189099511Rat
1566133Fbxw17F-box and WD-40 domain protein 17171435953314379386Rat
1566359RGD1566359similar to RIKEN cDNA B230219D221789230418932927Rat
1359256LOC306766hypothetical LOC306766171004914210061819Rat
1583843S1pr3sphingosine-1-phosphate receptor 3171378105013794408Rat
1566043Nutm2fNUT family member 2F171442364614437059Rat
1359175F12coagulation factor XII1792076839215530Rat
1591101LOC689526hypothetical protein LOC689526171478035614786234Rat
1592304LOC689458similar to vitamin A-deficient testicular protein 11-like171462039514628951Rat
1592314Gtf2f2-ps1general transcription factor IIF subunit 2, pseudogene 1171461069614614672Rat
1592325LOC689437similar to vitamin A-deficient testicular protein 11-like171460136514608162Rat
1587838Pfn3profilin 31792175959218122Rat
1563703Slc25a48solute carrier family 25, member 481781199648161293Rat
1585494Eif4e1beukaryotic translation initiation factor 4E family member 1B1798313389856250Rat
1589530Cenppcentromere protein P171501386915189312Rat
1593548LOC689316hypothetical protein LOC689316171435724914421194Rat
1594820Nxnl2nucleoredoxin-like 2171403115114035897Rat
1590239Pcbd2pterin-4 alpha-carbinolamine dehydratase 21788451618896343Rat
1591058LOC689569similar to vitamin A-deficient testicular protein 11-like171486848614873837Rat
1594779Atp5mc2-ps5ATP synthase membrane subunit c locus 2, pseudogene 5171424519614245875Rat
1593560LOC689303similar to vitamin A-deficient testicular protein 11-like171433870014423635Rat
1594767Wbp11-ps4WW domain binding protein 11, pseudogene 4171430358414309651Rat
2319147LOC100361933ribosomal protein S12-like171524259715243105Rat
2318818Rpl35-ps1ribosomal protein L35, pseudogene 11783448408345242Rat
2320282Ecm2extracellular matrix protein 2171512019415152536Rat
2319689Simc1SUMO-interacting motifs containing 1171006175210106938Rat
2321935LOC100360522ribosomal protein P1-like1784316568432740Rat
4888548Mir3542microRNA 35421791075669107682Rat
4888582Mir3596bmicroRNA 3596b171611589416115988Rat
2325350Mirlet7f-1osmicroRNA let7f-1, opposite strand171611413416114222Rat
2325409Mirlet7a1microRNA let-7a-1171611376616113859Rat
2325622Mirlet7dmicroRNA let-7d171611589316115990Rat
4888607Mirlet7f-1microRNA let7f-1171611413016114226Rat
6495217Rpl6-ps6ribosomal protein L6, pseudogene 6171511115315112082Rat
6498862LOC100910343uncharacterized LOC100910343171311055013133633Rat
6502900Rplp0-ps1ribosomal protein lateral stalk subunit P0, pseudogene 1171046213410463316Rat
6497608Spata31c2SPATA31 subfamily C member 2171465709614664280Rat
7511883LOC102555503uncharacterized LOC1025555031779926328000665Rat
7662067LOC102552119uncharacterized LOC102552119171080346010809023Rat
7647881LOC102549715uncharacterized LOC102549715171428637114290564Rat
7650032LOC102547185uncharacterized LOC1025471851783681918374447Rat
7655438LOC102548031uncharacterized LOC102548031171446404814472628Rat
7587129LOC102556322uncharacterized LOC102556322171381457213820743Rat
7608842LOC102550792uncharacterized LOC1025507921797822729787085Rat
7609640LOC102554142uncharacterized LOC102554142171182708911861334Rat
7610838LOC102556474uncharacterized LOC102556474171411592414122693Rat
7615661LOC102550793uncharacterized LOC102550793171577650115782662Rat
7597597LOC102552470uncharacterized LOC102552470171101673911018366Rat
7574079Kif11-ps1kinesin family member 11, pseudogene 1171566850515673667Rat
7574542LOC102555869uncharacterized LOC102555869171306004213082861Rat
7579019LOC102546342uncharacterized LOC102546342171450942014516154Rat
7547464LOC102546542uncharacterized LOC102546542171425869914265934Rat
7585937LOC102547119spermatogenesis-associated protein 31C2-like171142981911438281Rat
7733938LOC102549716high mobility group protein B1-like171484535114924605Rat
7700893LOC102554241uncharacterized LOC102554241171186512311877155Rat
7680951LOC102552096uncharacterized LOC102552096171594656815968132Rat
9308966LOC103694034uncharacterized LOC1036940341786977688710223Rat
9251698Lnc012long non-coding RNA 012171020480010237980Rat
9299224LOC103694041uncharacterized LOC103694041171272432212729314Rat
11455007Trnak-cuu17transfer RNA lysine (anticodon CUU) 17171461041314610485Rat
11461516LOC108348503uncharacterized LOC1083485031784221898426094Rat
11461795LOC108348512uncharacterized LOC108348512171250403312533736Rat
11445668LOC108348502uncharacterized LOC1083485021782201448236018Rat
11459529LOC108353141uncharacterized LOC108353141171426706814285443Rat
11442307LOC10834850960S ribosomal protein L35a pseudogene171047781810478314Rat
11396780LOC108348476spermatogenesis-associated protein 31-like171116291711169296Rat
11386194LOC108348505uncharacterized LOC1083485051790899989102707Rat
11386207LOC108348510uncharacterized LOC108348510171093153910966537Rat
11404592LOC108348511uncharacterized LOC108348511171107059611085374Rat
11501598LOC108348513uncharacterized LOC108348513171268618912689484Rat
11498038LOC10834852360S ribosomal protein L7a pseudogene171508826715090514Rat
11486166LOC108348525uncharacterized LOC108348525171612050116139230Rat
11489292LOC108353122uncharacterized LOC108353122171457522214601220Rat
11492159LOC108353155uncharacterized LOC108353155171223662712279384Rat
11492955LOC108348514uncharacterized LOC108348514171287073912876327Rat
41379058LOC120097802igE-binding protein-like171475688314791952Rat
41276873LOC120097834uncharacterized LOC1200978341797173879721262Rat
41169198LOC120097901uncharacterized LOC120097901171297591612979231Rat
41249018LOC120097804uncharacterized LOC120097804171468443114689912Rat
41357930LOC120097947uncharacterized LOC1200979471781080708112197Rat
41279858LOC120097807uncharacterized LOC120097807171447808214481647Rat
41174187Rps28-ps2ribosomal protein S28, pseudogene 2171253813512582827Rat
41118493LOC120097987small nucleolar RNA SNORA17171608215716082288Rat
41121784LOC120097809uncharacterized LOC120097809171322849613251893Rat
41180815LOC120097801spermatogenesis-associated protein 31E1-like171431743314324559Rat
41288467LOC120097877uncharacterized LOC120097877171230628612312966Rat
41159380LOC120097786uncharacterized LOC1200977861780080868011331Rat
41372426LOC120097990small nucleolar RNA SNORA17171221618312216312Rat
41399398LOC120097749uncharacterized LOC120097749171506893115069724Rat
41071520LOC120097948uncharacterized LOC1200979481785785528603094Rat
41293038Trnas-aga29transfer RNA serine (anticodon AGA) 291789856008985674Rat
41294837LOC120097817uncharacterized LOC120097817171044303610449288Rat
41402818LOC120097998small nucleolar RNA SNORA171784450208445143Rat
41378093LOC120097738spermatogenesis-associated protein 31A3-like171136024111363236Rat
41165672Trnaa-ugc8transfer RNA alanine (anticodon UGC) 8171561598715616059Rat
41165812LOC120097805uncharacterized LOC120097805171462205114627071Rat
41166359LOC120098032U4 spliceosomal RNA171073729910737389Rat
41233374LOC120097808uncharacterized LOC120097808171250207712504880Rat
40998148LOC120097924uncharacterized LOC120097924171018108010210110Rat
40930565LOC120098019U2 spliceosomal RNA171048650010486619Rat
41003373LOC120098012small nucleolar RNA SNORA84171498507314985205Rat
40964660LOC120097800thymosin beta-10-like171413565414135897Rat
40940609LOC120097917uncharacterized LOC120097917171479397714824723Rat
40941432LOC120098049U6 spliceosomal RNA1782705378270642Rat
40944361LOC120097819uncharacterized LOC120097819171105048111058723Rat
41316127LOC120097868uncharacterized LOC120097868171105891611066506Rat
41030591LOC120097806uncharacterized LOC120097806171470894714739691Rat
41338494LOC120097978small nucleolar RNA SNORA2/SNORA34 family171357293913573075Rat
41314589LOC120097837uncharacterized LOC120097837171315814913170015Rat
41062017LOC120097822uncharacterized LOC120097822171386107413864947Rat
41063048LOC120097935uncharacterized LOC120097935171610527116116498Rat
41064823LOC120097949uncharacterized LOC1200979491786880928698777Rat
41235352LOC120098002small nucleolar RNA SNORA17171286885012868949Rat
41018001LOC120098038U6 spliceosomal RNA1792358369235942Rat
41041361LOC120097933uncharacterized LOC120097933171429506114305709Rat
41074434LOC120097976small nucleolar RNA SNORA24171496187714961996Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10484D17Mgh11112171053898510539099Ratregion
34276D17Mgh2126171533061315330732Ratregion
34588D17Mco4215171053990410540108Ratregion
33573D13Mit131061781124578112650Ratregion
37386D17Rat762201779799687980186Ratregion
35354D17Rat61561799912869991442Ratregion
36980D17Rat51481792368219236964Ratregion
37780D17Rat93206171330887813309080Ratregion
35114D17Rat92131171060836710608498Ratregion
38138D17Rat66208171608644516086645Ratregion
38384D3Rat1152001792421609242380Ratregion
40514D17Rat134140171327115413271296Ratregion
38416D17Rat70200171528186615282062Ratregion
38498D17Rat86249171245103112451284Ratregion
38664D17Rat1012251793483189348531Ratregion
38734D17Rat902361781895278189770Ratregion
38992D17Rat61221171398677313986994Ratregion
41258D17Rat1091261794466489446788Ratregion
41306D17Rat1061401791752249175368Ratregion
43078D17Rat184247171234533112345554Ratregion
43080D17Rat157206171275609212756301Ratregion
43082D17Rat142207171631690816317111Ratregion
43083D17Rat159213171393147513931681Ratregion
40920D17Rat112221171502195215022177Ratregion
40956D17Rat1072001792013659201562Ratregion
40982D17Rat108110171084318510843291Ratregion
41028D17Rat110136171608546816085604Ratregion
41604D17Rat1041261786400948640244Ratregion
60142D17Got121581793019379302095Ratregion
45418D17Got91721785809648581133Ratregion
45424D17Got13133171209513512095268Ratregion
45428D17Got15278171422074114221019Ratregion
45433D17Got20257171607149116071747Ratregion
1627271D17Mco12259171283874212839001Ratregion
1627958D17Wox301791483179148412Ratregion
1627958D17Wox301792368399236938Ratregion
1629166D17Wox23226171054339110543617Ratregion
1634912D17Got2142491780044678004716Ratregion
1635731D17Got201148171393146213931610Ratregion
1634344D17Wox281795992869599469Ratregion
7206418RAN918171234719112348109Ratregion
7206458Ror2950171214691112147861Ratregion
7206508UniSTS:546781115171337793113378527Ratregion
5036023PMC86941P1356171337706413377420Ratregion
5038752RH1273122191798762319876532Ratregion
5036418Mx1170171260987112610041Ratregion
5037177RH91165179171525981815259997Ratregion
5035532UniSTS:2654214061783631438363549Ratregion
5035560RPLP1881784319948432082Ratregion
5028743Sncb2111798467519846962Ratregion
5034215RH141803211171499060414990815Ratregion
5028983RH1430672281789254678925695Ratregion
5031762AU047237205171622485716225066Ratregion
5029131RH1436401181784381318438253Ratregion
5032333Hrh2496171038501910385515Ratregion
5027024RH1344391851799496879949872Ratregion
5027085D3S3819175171577329015773465Ratregion
5035420BM3868882041791127809112984Ratregion
5035464AI235989217171189003711890254Ratregion
5034918AI1033752441792894439289687Ratregion
5027461AV225605118171229560412295722Ratregion
5027463U712061091787995268799635Ratregion
5030097BE110258152171000821510008367Ratregion
5030175AI1453812201798546989854918Ratregion
5025110BB196053116171518877915188895Ratregion
5025380RH128092209171242445712424666Ratregion
5028151D13Mit156120171380597013806090Ratregion
5025936RH130263195171518905515189250Ratregion
5028551C86281185171337687113377056Ratregion
5051889RH94716138171264949612649634Ratregion
5053639RH1427651631789409208941083Ratregion
5056463RH144393145171015295110153096Ratregion
5053757RH142833169171005075610050925Ratregion
5053891RH1429101061799521719952277Ratregion
5056689RH1445232581792860079286265Ratregion
5059490AW5245141491789422798942428Ratregion
5058566BI284209203171110248311102686Ratregion
5058588BE1021231741792152949215468Ratregion
5058708BE102358159171568323615683395Ratregion
5058836AI0710051891791149579115146Ratregion
5056683RH1445191681792179309218098Ratregion
5056875RH1446311591792799739280132Ratregion
5058118BF3866231501796146979614847Ratregion
5055365RH1437591911793136749313865Ratregion
5055413RH143787259171333604313336302Ratregion
5058978BE102663166171311059913110765Ratregion
5052847RH142308187171110143611101623Ratregion
5058250BI277828155171006148510061640Ratregion
5058308BF3869991661790149279015093Ratregion
5049880RH1337352121781200548120267Ratregion
5058506BF393074242171283244412832686Ratregion
5050542RH1341161971793056369306100Ratregion
5050720RH1342191911789445828944773Ratregion
5050742RH134232192171561092315611115Ratregion
5053273RH1425532651798557089855973Ratregion
5041726RH1290231881789927058992893Ratregion
5040684RH128424198171545299415453192Ratregion
5040716RH1284422121791644669164678Ratregion
5040896RH128546191171002756010027751Ratregion
5043396RH1300021821793103079310489Ratregion
5044272RH1305071801791082289108408Ratregion
5044434RH130600194171437705914377253Ratregion
5045322RH131111183171191538711915570Ratregion
5045504RH131216217171530525615305473Ratregion
5043968RH130334197171193606311936419Ratregion
5043968RH130334197171193606311936435Ratregion
5044710RH1307592011795098499510050Ratregion
5048716RH133064210171002190610022116Ratregion
5048760RH133089211171229545212295663Ratregion
5047578RH132408192171036620610366398Ratregion
5046156RH1315902001793049329305132Ratregion
5048908RH133175218171461194614612161Ratregion
5045694RH1313251871784361938436380Ratregion
5049006RH133232204171436827314368477Ratregion
5046686RH131896182171054469310544875Ratregion
5047976RH132637183171611626916116452Ratregion
5048032RH1326692091796224109622619Ratregion
5049408RH133464204171003107110031275Ratregion
5049488RH1335102131799247889925001Ratregion
5047084RH132124193171378131313781506Ratregion
5048178RH132753220171110173011101950Ratregion
5049782RH133678183171551288615513069Ratregion
5040232RH1281651801783256268325806Ratregion
5040474RH1283041841793053509305534Ratregion
5039748RH127884180171541664715416827Ratregion
5042410RH129418191171276126412761457Ratregion
5040864RH128527183171403115214031335Ratregion
5043480RH130049241171599051915990760Ratregion
5042868RH1296932171791311869131404Ratregion
5075462RH138608180171571516515715345Ratregion
5072534RH136905193171276126312761458Ratregion
5076572RH139253214171503243215032646Ratregion
5077112RH1395671821789422238942405Ratregion
5075768RH1387862091799582819958490Ratregion
5079718RH1411631951791771719177366Ratregion
5079848RH141238220171191500511915225Ratregion
5077930RH140042219171001956610019786Ratregion
5078588RH140430159171377968313779842Ratregion
5072998RH1371752201790305079030727Ratregion
5073050RH1372051961791392389139588Ratregion
5073096RH137235200171260468812604888Ratregion
5073934RH1377231951793323319332526Ratregion
5073970RH137744141171359735313597494Ratregion
5071848RH1353202051792883669288571Ratregion
5073788RH137639129171377470713774840Ratregion
5061738BF402796124171533785015337974Ratregion
5063338BF404113182171434661714346799Ratregion
5066654AU048229149171072730310727452Ratregion
5068616AU047037210171051659410516637Ratregion
5068840AU046893124171123335511233420Ratregion
5069662AU046352232171607152216071758Ratregion
5069146AU046695101171053089410530990Ratregion
5069254AU0466182561786400308640284Ratregion
5069268AU0466082481798499799850055Ratregion
5060182BF400649206171538662315386830Ratregion
5061940BE112196159171518095515181114Ratregion
5065262AA9969061651789979698998134Ratregion
5062382BE106621157171022332010223477Ratregion
5065632BE109502150171384645513846605Ratregion
5062812AW5346111521799483519948503Ratregion
5064108BE120617206171538285815383064Ratregion
5065880AA964229134171048719810487332Ratregion
5060146BE103912159171110264011102799Ratregion
5063690BE107980170171228092812281098Ratregion
5063836BE120016151171021855410218705Ratregion
5065232AA996831215171567745715677671Ratregion
5064042BE1205241621790886849088846Ratregion
5065796BE1098851821796148609615042Ratregion
5060766BE1044902071793112419311448Ratregion
5060810BF389188171171209381012093981Ratregion
5065942BE1162232201793146189314838Ratregion
5064794BE108513163171185147411851637Ratregion
5061458BE1052171511795064449506595Ratregion
5064798BE108539174171603036416030538Ratregion
5064906BF405276174171514420615144380Ratregion
5061546BE105422203171001727210017475Ratregion
5082553BF416265196171214776212147958Ratregion
5087826Drd1a103171054258010542683Ratregion
5089179AU0490021531780652578065408Ratregion
5088245AU048453165171579194615792111Ratregion
5083341BG374969186171101680811016994Ratregion
5088175AU048412215171207497212075187Ratregion
5080740RH1417542161793120989312313Ratregion
5080842RH141814181171512108115122214Ratregion
5085232AA7996071991789232498923448Ratregion
5085605BM384003171171323901713239188Ratregion
5085623Slc34a11641792189919219155Ratregion
5085707BE102659158171003025710030415Ratregion
5082695BF4166601811796387079638888Ratregion
5081178RH142010198171574420215744400Ratregion
5083813AA891724230171525994915260179Ratregion
5503484CLTB_4592613171001880310019416Ratregion
5503466RGS14_30615881792494579250045Ratregion
5503724CPLX2_9184596171022316710223764Ratregion
5505333Barx1965171599077515991740Ratregion
5505340Pitx11511787988568799007Ratregion
5506374UniSTS:479010651171500614015006791Ratregion
5506817G46247231171315345613153687Ratregion
5506879G47094237171442961714429854Ratregion
5507017fj85b10.x1101171380339813803499Ratregion
5507303fc02h02.x1396171583556715835963Ratregion
5500131UniSTS:237020971791646599164756Ratregion
5500121UniSTS:237015200171337692913377128Ratregion
5500123UniSTS:237019240171229538512295625Ratregion
5500603RH1361832001793176479317847Ratregion
5501367G06234261171525979415260055Ratregion
5502680F122321792150489215366Ratregion
Position Markers

Flank 1: (D17Rat76)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2177,979,968 - 7,980,186 (+)MAPPER
Rnor_6.0178,424,467 - 8,424,684NCBI
Rnor_5.01710,600,735 - 10,600,952UniSTS
RGSC_v3.41713,930,241 - 13,930,458UniSTS
RGSC_v3.41713,930,240 - 13,930,458RGD
RGSC_v3.11713,930,241 - 13,930,458RGD
Celera178,074,017 - 8,074,234UniSTS
RH 3.4 Map1774.0RGD
RH 3.4 Map1774.0UniSTS
RH 2.0 Map1748.0RGD
SHRSP x BN Map176.81RGD
FHH x ACI Map174.4999RGD
Cytogenetic Map17p14UniSTS
Peak: (D17Rat61)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21713,986,773 - 13,986,994 (+)MAPPER
Rnor_6.01714,009,679 - 14,009,899NCBI
Rnor_5.01716,076,494 - 16,076,714UniSTS
RGSC_v3.41719,877,005 - 19,877,303RGD
RGSC_v3.41719,877,081 - 19,877,301UniSTS
RGSC_v3.11719,877,081 - 19,877,301RGD
Celera1713,725,959 - 13,726,179UniSTS
RH 3.4 Map17148.7UniSTS
RH 3.4 Map17148.7RGD
RH 2.0 Map17118.0RGD
SHRSP x BN Map1711.64RGD
FHH x ACI Map179.0399RGD
Flank 2: (D17Rat142)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21716,316,908 - 16,317,111 (+)MAPPER
Rnor_6.01716,619,865 - 16,620,067NCBI
Rnor_5.01718,671,807 - 18,672,009UniSTS
RGSC_v3.41722,446,940 - 22,447,143RGD
RGSC_v3.41722,446,941 - 22,447,143UniSTS
RGSC_v3.11722,446,940 - 22,447,143RGD
Celera1716,041,981 - 16,042,183UniSTS
SHRSP x BN Map1711.64RGD
SHRSP x BN Map1711.64UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122871563Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17211514921881669Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)17429913021293263Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17429913021293263Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17435448727028127Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17435448727028127Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat
1581553Pur14Proteinuria QTL 145.30.0001urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)17797996816317111Rat
2303561Bw91Body weight QTL 912body mass (VT:0001259)body weight (CMO:0000012)17886846253868462Rat
1582199Insul5Insulin level QTL 53.40.0119blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)17920136523653323Rat
1582208Kidm32Kidney mass QTL 323.90.0018kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17920136523653323Rat
1582224Epfw4Epididymal fat weight QTL 43.50.0058epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)17920136523653323Rat
1582225Bw67Body weight QTL 676.20.0001body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582226Bw64Body weight QTL 644.20.0017body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582241Bw70Body weight QTL 704.60.0003body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582245Bw73Body weight QTL 734.60.0004body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582258Bw76Body weight QTL 764.60.0005body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17999128640540197Rat
1549900Iddm20Insulin dependent diabetes mellitus QTL 203.7pancreas integrity trait (VT:0010560)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)171398677321975515Rat
1331720Rf43Renal function QTL 432.881kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)171533061323017269Rat
1331765Hrtrt15Heart rate QTL 154.094heart pumping trait (VT:2000009)heart rate (CMO:0000002)171533061355836425Rat
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171578159260781592Rat
1354659Scl68Serum cholesterol level QTL 683.9blood VLDL cholesterol amount (VT:0005144)blood very low density lipoprotein cholesterol level (CMO:0000648)171578159260781592Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_map QTL associated with salt sensitivity alleles from SBH/Ygl 1578625
qtl_statistics_details MultiQTL software package used for linkage analysis; analysis was for month 8 single-trait analysis after unlateral nephrectomy 1578625