Bw70 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL: Bw70 (Body weight QTL 70) Rattus norvegicus

Symbol: Bw70
Name: Body weight QTL 70
RGD ID: 1582241
Also known as: BW (10 mo)
Trait: body mass   (VT:0001259)    
Measurement Type: body weight   (CMO:0000012)    
LOD Score: 4.6
P Value: 3.0E-4
Variance: 16.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0179,730,263 - 21,491,085RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01711,839,249 - 23,473,342RGDRnor5.0
RGSC_v3.41715,245,341 - 29,604,237RGDRGSC3.4
RGSC_v3.11715,245,341 - 29,607,065RGD
Cross Type: intercross
Strains Crossed: PD/Cub BN/Cub 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement
body weight  (IDA)

Experimental Condition

Measurement Method

Vertebrate Trait
body mass  (IDA)

Rat Strain
BN/Cub  (IEA)
PD/Cub  (IEA)

References

References - curated
1. Seda O, etal., Physiol Genomics. 2005 Apr 14;21(2):243-52. Epub 2005 Feb 22.
Related QTLs

Related QTL Description Reference
Kidm32 maps to same region RGD:1580752
Epfw4 maps to same region RGD:1580752
Bw67 maps to same region RGD:1580752
Bw64 maps to same region RGD:1580752
Bw76 maps to same region RGD:1580752
Bw73 maps to same region RGD:1580752
Insul5 maps to same region RGD:1580752


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
7704121LOC102550356uncharacterized LOC1025503561797271119735725Rat
1359175F12coagulation factor XII1797365779744420Rat
1587838Pfn3profilin 31797464859747012Rat
3708Slc34a1solute carrier family 34 member 11797477669762739Rat
620003Rgs14regulator of G-protein signaling 141797779259792007Rat
1308965Lman2lectin, mannose-binding 21797981369815820Rat
7538287LOC102550438uncharacterized LOC1025504381798268279830400Rat
628624Mxd3Max dimerization protein 31798303269834052Rat
1308082Prelid1PRELI domain containing 11798342459837285Rat
1309112Rab24RAB24, member RAS oncogene family1798372599839464Rat
1307748Nsd1nuclear receptor binding SET domain protein 11798408599955391Rat
1565721LOC498705hypothetical protein LOC4987051799727969982609Rat
2612Fgfr4fibroblast growth factor receptor 417999007210004339Rat
1308068Zfp346zinc finger protein 346171002159610061803Rat
1307009Uimc1ubiquitin interaction motif containing 1171006191510130921Rat
2798Hk3hexokinase 3171013472610152976Rat
621755Unc5aunc-5 netrin receptor A171015294910208599Rat
7608842LOC102550792uncharacterized LOC102550792171031993210321373Rat
1311167Tspan17tetraspanin 17171035698010364614Rat
1585494Eif4e1beukaryotic translation initiation factor 4E family member 1B171036915310391667Rat
9297494LOC103694038uncharacterized LOC103694038171038168310391505Rat
70992Sncbsynuclein, beta171038447210392776Rat
7557811LOC102547505atherin-like171039792610402082Rat
1308762Gprin1G protein-regulated inducer of neurite outgrowth 1171041112910415023Rat
1560576Cdhr2cadherin-related family member 2171041504410450589Rat
1307212Rnf44ring finger protein 44171045803610472410Rat
1306577Faf2Fas associated factor family member 2171048565010527886Rat
621353Cltbclathrin, light chain B171053734810554999Rat
1309691Higd2aHIG1 hypoxia inducible domain family, member 2A171055871410559638Rat
1305727Nop16NOP16 nucleolar protein171055981110564728Rat
1303298Arl10ADP-ribosylation factor like GTPase 10171056706410575518Rat
1359256LOC306766hypothetical LOC306766171058604310598631Rat
2319689Simc1SUMO-interacting motifs containing 1171059856410640655Rat
7723108LOC102551420uncharacterized LOC102551420171064557310657112Rat
1566033RGD1566033similar to BC003940 protein171065524610655690Rat
1311669Thoc3THO complex 3171067694310686134Rat
9251698Lnc012long non-coding RNA 012171073908510772616Rat
70945Cplx2complexin 2171075687110828811Rat
9081807LOC103694917uncharacterized LOC103694917171078606310802909Rat
2831Hrh2histamine receptor H 2171091295910931389Rat
6502900LOC10090954060S acidic ribosomal protein P0-like171100612111006877Rat
11442307LOC10834850960S ribosomal protein L35a pseudogene171103734811037839Rat
1308482Sfxn1sideroflexin 1171104658811082219Rat
2518Drd1dopamine receptor D1171109973611104352Rat
7662067LOC102552119uncharacterized LOC102552119171120820811214129Rat
11472021LOC108348604uncharacterized LOC108348604171138846511393448Rat
7503343LOC102552317uncharacterized LOC102552317171146180111474669Rat
11386207LOC108348510uncharacterized LOC108348510171151590011550946Rat
7597597LOC102552470uncharacterized LOC102552470171160115311608807Rat
11404592LOC108348511uncharacterized LOC108348511171165972911670547Rat
3116Msx2msh homeobox 2171168386211689527Rat
9160921LOC103694046spermatogenesis-associated protein 31A3-like171176082211788714Rat
11396780LOC108348476spermatogenesis-associated protein 31-like171178965411792150Rat
9269382LOC103694047spermatogenesis-associated protein 31A3-like171179234411797909Rat
7609640LOC102554142uncharacterized LOC102554142171183390611839256Rat
7700893LOC102554241uncharacterized LOC102554241171184174711856451Rat
9318257LOC103694040uncharacterized LOC103694040171185099411856430Rat
1307140Sptlc1serine palmitoyltransferase, long chain base subunit 1171185652511895566Rat
1561671RGD1561671similar to RIKEN cDNA 2900010M23171191534711916026Rat
1305275Ror2receptor tyrosine kinase-like orphan receptor 2171195355212134386Rat
11492159LOC108353155uncharacterized LOC108353155171222253212224885Rat
620972Nfil3nuclear factor, interleukin 3 regulated171226110212276316Rat
1306087AuhAU RNA binding methylglutaconyl-CoA hydratase171231017812405224Rat
11461795LOC108348512uncharacterized LOC108348512171253659912538921Rat
3796Sykspleen associated tyrosine kinase171261431112669568Rat
11501598LOC108348513uncharacterized LOC108348513171269423912697724Rat
9299224LOC103694041uncharacterized LOC103694041171273270512735962Rat
1305580Diras2DIRAS family GTPase 2171273807812766700Rat
11492955LOC108348514uncharacterized LOC108348514171287521912884658Rat
11389328LOC108348515uncharacterized LOC108348515171288601712907476Rat
9471153LOC103694048late cornified envelope-like proline-rich protein 1171298114012981451Rat
11478093LOC108348516uncharacterized LOC108348516171306319113069492Rat
7574542LOC102555869uncharacterized LOC102555869171307842113090221Rat
6498862LOC100910343uncharacterized LOC100910343171312012513143107Rat
1311796Gadd45ggrowth arrest and DNA-damage-inducible, gamma171339147413393219Rat
1310554Sema4dsemaphorin 4D171351627613538513Rat
9120378LOC103694042uncharacterized LOC103694042171354600913553981Rat
620991Secisbp2SECIS binding protein 2171355534813586595Rat
1562047Cks2CDC28 protein kinase regulatory subunit 2171358766413593423Rat
69348Shc3SHC adaptor protein 3171367052013791043Rat
1583843S1pr3sphingosine-1-phosphate receptor 3171379938313812877Rat
7587129LOC102556322uncharacterized LOC102556322171382261213839059Rat
1594847LOC689205similar to cytoplasmic beta-actin171387924413880443Rat
1594820Nxnl2nucleoredoxin-like 2171405389614058642Rat
11436999NEWGENE_1306210spindlin 1171407882114103338Rat
7610838LOC102556474uncharacterized LOC102556474171414335914146513Rat
9417894LOC103694043uncharacterized LOC103694043171415756614170946Rat
1594779LOC689273similar to ATP synthase, H+ transporting, mitochondrial Fo complex, subunit c (subunit 9), isoform 2171427900014279934Rat
9386245LOC103694044uncharacterized LOC103694044171429686214299684Rat
7620001LOC102547297uncharacterized LOC102547297171430087114306264Rat
11459529LOC108353141uncharacterized LOC108353141171430643914324398Rat
7528101LOC102546925uncharacterized LOC102546925171430643914325316Rat
7530262LOC102546682uncharacterized LOC102546682171432530814329661Rat
1594767LOC689286similar to WW domain binding protein 11171434219514345296Rat
7732055LOC102546505uncharacterized LOC102546505171435541214357215Rat
6497608LOC100910585uncharacterized LOC100910585171436701114374434Rat
7509212LOC102547069uncharacterized LOC102547069171436960214371329Rat
7647881LOC102549715uncharacterized LOC102549715171439217914396384Rat
11453231LOC108353118uncharacterized LOC108353118171443286114434898Rat
1592325LOC689437similar to vitamin A-deficient testicular protein 11-like171445066514458289Rat
6576126Trnak-cuutransfer RNA lysine (anticodon CUU)171446012214460194Rat
11455007Trnak-cuu17transfer RNA lysine (anticodon CUU) 17171446012214460194Rat
1592314LOC689448similar to general transcription factor IIF, polypeptide 2171446109514463083Rat
1592304LOC689458similar to vitamin A-deficient testicular protein 11-like171446668714475606Rat
11489094LOC108353119uncharacterized LOC108353119171446966714477256Rat
1591058LOC689569similar to vitamin A-deficient testicular protein 11-like171451650714522309Rat
9226700LOC103690033isoleucine--tRNA ligase, cytoplasmic-like171454164614562733Rat
9222274LOC103694045proline-rich protein 2-like171454248714543884Rat
1309551Nol8nucleolar protein 8171456579414589154Rat
11481254LOC108348068centromere protein P-like171458925214608597Rat
1308171Ognosteoglycin171460744214628274Rat
9400356LOC103690116osteomodulin171463558814646368Rat
1549776Aspnasporin171465595814681355Rat
11498038LOC10834852360S ribosomal protein L7a pseudogene171466366014665429Rat
6495217LOC10091101860S ribosomal protein L6-like171468650714687465Rat
6495594LOC100910978extracellular matrix protein 2-like171469529314719087Rat
11443646LOC108353121uncharacterized LOC108353121171471909614721971Rat
11394813LOC10835312060S ribosomal protein L7a pseudogene171472335314725122Rat
7680951LOC102552096uncharacterized LOC102552096171478993114802769Rat
1310884Barx1BARX homeobox 1171482472114828196Rat
7547464LOC102546542uncharacterized LOC102546542171492873614939850Rat
7655438LOC102548031uncharacterized LOC102548031171494426014950264Rat
11489292LOC108353122uncharacterized LOC108353122171496607514980952Rat
7579019LOC102546342uncharacterized LOC102546342171498369514986931Rat
7660334LOC102548125uncharacterized LOC102548125171499542415015056Rat
1566043Nutm2fNUT family member 2F171502205215031768Rat
1593548LOC689316hypothetical protein LOC689316171505238515100186Rat
1566133Fbxw17F-box and WD-40 domain protein 17171507677315094635Rat
11390042LOC108353123uncharacterized LOC108353123171511778215119610Rat
1593560LOC689303similar to vitamin A-deficient testicular protein 11-like171511874815119648Rat
7515367LOC102551692uncharacterized LOC102551692171511967015120730Rat
1588453LOC498711similar to chromosome 9 open reading frame 79171515301115160667Rat
9173662LOC103694049uncharacterized LOC103694049171517820215183137Rat
1591101LOC689526hypothetical protein LOC689526171519216815199230Rat
11489840LOC108353142uncharacterized LOC108353142171519928915201934Rat
11374984LOC10835312460S ribosomal protein L7a pseudogene171521692215217946Rat
9109518LOC103694050uncharacterized LOC103694050171525348315257703Rat
9192559LOC103690246uncharacterized LOC103690246171525771115298896Rat
1560527RGD1560527similar to serine/threonine kinase171526910415298884Rat
9163268LOC103690115spermatogenesis-associated protein 31A6-like171527534315289980Rat
7733938LOC102549716high mobility group protein B1-like171529889415339696Rat
1591040LOC689587similar to chromosome 9 open reading frame 79171530895615315323Rat
1565598RGD1565598similar to serine/threonine kinase171533336815338263Rat
621022Iars1isoleucyl-tRNA synthetase 1171535601615402680Rat
9221605LOC103694051proline-rich protein 2-like171538220415383920Rat
11418826NEWGENE_1309551nucleolar protein 8171540586215429411Rat
1589530Cenppcentromere protein P171542952615603197Rat
11378586NEWGENE_1308171osteoglycin171544771615468793Rat
621818Omdosteomodulin171547610015484324Rat
9278606Aspnl1asporin-like 1171549647015521143Rat
11365405LOC108353125uncharacterized LOC108353125171550062815502790Rat
1563503RGD1563503similar to ribosomal protein L6171552629515527253Rat
2320282Ecm2extracellular matrix protein 2171553376015566403Rat
7607423LOC102550150uncharacterized LOC102550150171558646015593933Rat
1311271Ippkinositol-pentakisphosphate 2-kinase171560414815643312Rat
2319147LOC100361933ribosomal protein S12-like171565645415656986Rat
735093Bicd2BICD cargo adaptor 2171567364915718035Rat
1311725Fgd3FYVE, RhoGEF and PH domain containing 3171573796215800403Rat
11418052LOC108348606uncharacterized LOC108348606171581035115812128Rat
1310933Susd3sushi domain containing 3171581413215830328Rat
1306058Card19caspase recruitment domain family, member 19171584592015858750Rat
3179Ninj1ninjurin 1171586623515881284Rat
1307284Wnk2WNK lysine deficient protein kinase 2171592350816032271Rat
7574079LOC102552158kinesin-like protein KIF11-like171609294616095381Rat
1306643Fam120afamily with sequence similarity 120A171610610116196054Rat
7615661LOC102550793uncharacterized LOC102550793171619759516200501Rat
1305228Phf2PHD finger protein 2171624045816274626Rat
1307698Ptpdc1protein tyrosine phosphatase domain containing 1171633336916381887Rat
2325409Mirlet7a1microRNA let-7a-1171641785316417946Rat
4888607Mirlet7f1microRNA let-7f-1171641821716418313Rat
2325350Mirlet7f-1microRNA let-7f-1171641822116418309Rat
2325622Mirlet7dmicroRNA let-7d171641998016420077Rat
4888582Mir3596bmicroRNA 3596b171641998116420075Rat
11486166LOC108348525uncharacterized LOC108348525171642779116443268Rat
1304631Zfp169zinc finger protein 169171644332416471329Rat
11427485LOC108348526uncharacterized LOC108348526171645121616468745Rat
11469938LOC108353126uncharacterized LOC108353126171655415116579209Rat
631428Id4inhibitor of DNA binding 4, HLH protein171669255716695126Rat
7623637LOC102554492uncharacterized LOC102554492171674788516790014Rat
11489678LOC108348533uncharacterized LOC108348533171680097416804165Rat
11458415LOC108348529uncharacterized LOC108348529171704845217058813Rat
11478507LOC108348528uncharacterized LOC108348528171707135617078550Rat
7736948LOC102556357uncharacterized LOC102556357171709038117093518Rat
11513126LOC108348530uncharacterized LOC108348530171714533617155959Rat
1308856Rnf144bring finger protein 144B171781712217947777Rat
7539610LOC102555870uncharacterized LOC102555870171786312917866779Rat
9470611LOC103694052uncharacterized LOC103694052171796009517965791Rat
1303246DekDEK proto-oncogene171796587217987836Rat
1310701Kdm1blysine demethylase 1B171798797218028808Rat
1585162Tpmtthiopurine S-methyltransferase171802909018047716Rat
1585156LOC690056similar to NACHT, leucine rich repeat and PYD containing 4B171804770918059265Rat
735081Nhlrc1NHL repeat containing E3 ubiquitin protein ligase 1171805938218060572Rat
1564366RGD1564366similar to kappaB-Ras1 protein171809237118093150Rat
11460312LOC108348531uncharacterized LOC108348531171812954118139856Rat
1307825Kif13akinesin family member 13A171815158218335027Rat
2318699LOC100362185ribosomal protein L27-like171835078518351261Rat
3216Nup153nucleoporin 153171835871218411368Rat
1307845Fam8a1family with sequence similarity 8, member A1171841309318421974Rat
620310Cap2cyclase associated actin cytoskeleton regulatory protein 2171844161418592866Rat
11476917LOC108353127uncharacterized LOC108353127171850946718514107Rat
7721817LOC102554989zinc finger protein 120-like171863364718634703Rat
1584029Rbm24RNA binding motif protein 24171867103718682876Rat
1564013Stmnd1stathmin domain containing 1171879526018797861Rat
7714979LOC102554838stathmin domain-containing protein 1-like171880117018829170Rat
11379150LOC108348532uncharacterized LOC108348532171894624318976481Rat
7665766LOC102546543uncharacterized LOC102546543171899999319003111Rat
7517520LOC102546683uncharacterized LOC102546683171905388719061701Rat
11394758LOC108348527uncharacterized LOC108348527171905762919063284Rat
11040462LOC107305674serine/arginine-rich splicing factor 5 pseudogene171912429319125269Rat
3624Atxn1ataxin 1171916098619533814Rat
70980Gmprguanosine monophosphate reductase171954327419580929Rat
1305761Mylipmyosin regulatory light chain interacting protein171968204019703681Rat
7700383LOC102549787uncharacterized LOC102549787171971920419827560Rat
1590759Dtnbp1dystrobrevin binding protein 1172009013620182332Rat
1591663Jarid2jumonji and AT-rich interaction domain containing 2172018344020365219Rat
11416792LOC108348534uncharacterized LOC108348534172036644820375663Rat
7652507LOC102550318uncharacterized LOC102550318172057175420572923Rat
11477237LOC108348535uncharacterized LOC108348535172064443820653751Rat
11483241LOC108348536uncharacterized LOC108348536172066744420727317Rat
1597294LOC690399hypothetical protein LOC690399172070791920708434Rat
9094161LOC103694053uncharacterized LOC103694053172074682920749559Rat
7622881LOC102550662uncharacterized LOC102550662172079332720831546Rat
9256189LOC103694054uncharacterized LOC103694054172079499120813958Rat
7530995LOC102550765uncharacterized LOC102550765172086496620873913Rat
11500930LOC108348540uncharacterized LOC108348540172092644820976109Rat
1596092LOC690414hypothetical protein LOC690414172099567121012406Rat
7496434LOC102550923uncharacterized LOC102550923172102915321049142Rat
9465702LOC103694055uncharacterized LOC103694055172106654821073852Rat
7535633LOC102551388uncharacterized LOC102551388172109202121096202Rat
11465102LOC108348537uncharacterized LOC108348537172110394321110386Rat
11473306LOC108348538uncharacterized LOC108348538172111392221121033Rat
9163311LOC103694056proteasome maturation protein pseudogene172113119721132672Rat
9381437LOC103694057uncharacterized LOC103694057172119484321202135Rat
7587473LOC102551541uncharacterized LOC102551541172128765521296628Rat
1591023Smim13small integral membrane protein 13172133498921353252Rat
11416850LOC108353128uncharacterized LOC108353128172134712921351983Rat
4888554Mir3566microRNA 3566172135360421353712Rat
7587845LOC102548659uncharacterized LOC102548659172136192721367562Rat
1308605Elovl2ELOVL fatty acid elongase 2172138246121422413Rat
11515493LOC108348546uncharacterized LOC108348546172142269621430412Rat
1564922Sycp2lsynaptonemal complex protein 2-like172143047021486091Rat
1311127Gcm2glial cells missing transcription factor 2172149040221499516Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10484D17Mgh11112171109836711098480Ratregion
11257D17Wox16171953303219533287Ratregion
34276D17Mgh2126171574375515743873Ratregion
34588D17Mco4215171109928611099489Ratregion
36245D17Rat7138171843222718432366Ratregion
35354D17Rat6156171052970910529864Ratregion
36980D17Rat51481797657099765871Ratregion
37780D17Rat93206171332353413323735Ratregion
35114D17Rat92131171116840111168531Ratregion
39708D17Rat135200171990709219907294Ratregion
38138D17Rat66208171639052916390730Ratregion
38384D3Rat1152001797710679771286Ratregion
40514D17Rat134140171328594313286084Ratregion
38416D17Rat70200171569501715695212Ratregion
38498D17Rat86249171243186612432118Ratregion
38664D17Rat1012251798772149877426Ratregion
38698D17Rat75268171712644817126724Ratregion
38706D17Rat84138172149095021491085Ratregion
38992D17Rat61221171400967914009899Ratregion
41258D17Rat1091261799751349975271Ratregion
43078D17Rat184247171232598512326207Ratregion
43080D17Rat157206171276128012761488Ratregion
43082D17Rat142207171661986516620067Ratregion
43083D17Rat159213171395163513951840Ratregion
40884D17Rat111202171475385114754049Ratregion
40920D17Rat112221171543760315437825Ratregion
40920D17Rat112221171459732914597551Ratregion
40956D17Rat1072001797302639730459Ratregion
40982D17Rat108110171142622311426328Ratregion
41028D17Rat110136171638954716389684Ratregion
41074D17Rat114113171675014416750258Ratregion
60142D17Got121581798308349830991Ratregion
60146D17Got28139171981636319816501Ratregion
45424D17Got13133171208137212081504Ratregion
45426D17Rat156215171327637013276588Ratregion
45428D17Got15278171425438714254664Ratregion
45429D17Got21224171717821017178433Ratregion
45431D17Got16167171793379717933963Ratregion
45432D17Got18168171909075919090926Ratregion
45433D17Got20257171637556816375822Ratregion
45434D17Got17238171910200719102246Ratregion
45435D17Got22163171719534317195505Ratregion
45436D17Got24192171885414218854337Ratregion
45437D17Got23116171885385118853965Ratregion
45438D17Got25177171687374816873924Ratregion
45439D17Got26204171684136816841571Ratregion
45440D17Got27280171973233619732615Ratregion
45443D17Got29178172090024320900420Ratregion
1627271D17Mco12259171284659612846854Ratregion
1627804D17Got202195171712332717123516Ratregion
1627958D17Wox301797657279765845Ratregion
1629166D17Wox23226171110277311102998Ratregion
1641631D17Got203113171776611117766218Ratregion
1633512D17Got204166172039665320396818Ratregion
1635731D17Got201148171395162213951769Ratregion
1635894D17Got200196171711016117110356Ratregion
1634344D17Wox28171013739610137578Ratregion
7192488Idb4271171669431516694930Ratregion
7206288Jarid2224172020240720202630Ratregion
7206418RAN918171232784512328762Ratregion
7206458Ror2950171213314612134095Ratregion
7206508UniSTS:546781115171339256413393159Ratregion
5036023PMC86941P1356171339169713392052Ratregion
5038752RH127312219171041442310414723Ratregion
5038802RH127341216171781746917817686Ratregion
5038954RH127428190171841104218411231Ratregion
5039258RH127603195171786628317866477Ratregion
5036418Mx1170171261956512619734Ratregion
5037177RH91165179171567369515673873Ratregion
5035627A001W22144171912444119124584Ratregion
5025994RH130497180171804751618047695Ratregion
5028743Sncb211171038451910384729Ratregion
5031542AU047986165171984254119842705Ratregion
5034215RH141803211171540601915406229Ratregion
5034215RH141803211171456598214566192Ratregion
5034229RH141853210171841396518414174Ratregion
5026296RH131669184171841327218413455Ratregion
5031762AU047237205171652865016528854Ratregion
5026710RH133238180171786901717869196Ratregion
5032333Hrh2496171092956410930059Ratregion
5027024RH134439185171048812210488306Ratregion
5027085D3S3819175171619438116194555Ratregion
5032409C88147113171841120318411315Ratregion
5035372AA818380181171968233919682519Ratregion
5035464AI235989217171186931111869527Ratregion
5034918AI1033752441798183419818584Ratregion
5027461AV225605118171227619312276310Ratregion
5030097BE110258152171054405210544203Ratregion
5030175AI145381220171039246210392681Ratregion
5025110BB196053116171560266515602780Ratregion
5025380RH128092209171240478612404994Ratregion
5028151D13Mit156120171382429013824409Ratregion
5028153D13Mit17974172033207720332150Ratregion
5031011BF405975162172125152521251826Ratregion
5025936RH130263195171560294115603135Ratregion
5028551C86281185171339150413391688Ratregion
5051889RH94716138171265767812657815Ratregion
5055871RH144051148171669376316693910Ratregion
5056463RH144393145171068671110686855Ratregion
5053757RH142833169171058757010587738Ratregion
5053891RH142910106171049060610490711Ratregion
5056689RH1445232581798149059815162Ratregion
5055739RH143974108172142212021422228Ratregion
5058566BI284209203171168913211689334Ratregion
5058588BE1021231741797441859744358Ratregion
5058708BE102358159171610494916105107Ratregion
5058762BF387059158171846308918463246Ratregion
5056683RH1445191681797468219746988Ratregion
5056875RH1446311591798088719809029Ratregion
5058118BF386623150171015280610152955Ratregion
5055365RH1437591911798425719842761Ratregion
5055413RH143787259171335069113350949Ratregion
5058978BE102663166171312017513120340Ratregion
5052847RH142308187171168808511688271Ratregion
5058250BI277828155171059829810598452Ratregion
5050096RH133860195171829987018300064Ratregion
5058506BF393074242171284029812840539Ratregion
5053451RH142656168172117234321172510Ratregion
5057588BF392233180171871031018710489Ratregion
5057820BF386213151171945073419450876Ratregion
5050542RH1341161971798345339834996Ratregion
5049842RH133713202171674955516749756Ratregion
5050708RH134212182172110555221105718Ratregion
5050730RH134225213172133895521339167Ratregion
5050730RH134225213172132556821325780Ratregion
5050742RH134232192171603071616030907Ratregion
5053273RH142553265171039347210393736Ratregion
5040684RH128424198171586641915866616Ratregion
5040896RH128546191171056442210564612Ratregion
5043396RH1300021821798392049839385Ratregion
5044434RH130600194171507687615077069Ratregion
5045322RH131111183171189465911894841Ratregion
5045504RH131216217171571840315718619Ratregion
5043968RH130334197171191537811915777Ratregion
5043968RH130334197171191537811915733Ratregion
5044710RH130759201171004877810048978Ratregion
5044710RH130759201171003766010037860Ratregion
5048716RH133064210171055876810558977Ratregion
5048760RH133089211171227604112276251Ratregion
5047578RH132408192171091075210910943Ratregion
5046156RH1315902001798338299834028Ratregion
5047616RH132430217171798754617987762Ratregion
5048908RH133175218171446165614461870Ratregion
5049006RH133232204171508565215085855Ratregion
5046686RH131896182171110407511104256Ratregion
5047976RH132637183171642035716420539Ratregion
5048032RH132669209171016051910160727Ratregion
5049408RH133464204171056793210568135Ratregion
5049488RH133510213171046283710463049Ratregion
5047084RH132124193171379964713799839Ratregion
5048178RH132753220171168837911688598Ratregion
5049782RH133678183171593267315932855Ratregion
5047180RH132179218171806185818062075Ratregion
5040474RH1283041841798342479834430Ratregion
5043180RH129878150172018218020182329Ratregion
5039748RH127884180171582993215830111Ratregion
5039846RH127940191172133508121335271Ratregion
5039846RH127940191172132185421322044Ratregion
5042410RH129418191171276645412766646Ratregion
5040864RH128527183171405389814054080Ratregion
5043480RH130049241171482482914825069Ratregion
5073906RH137707171171841752318417693Ratregion
5075462RH138608180171613708616137265Ratregion
5072534RH136905193171276645312766647Ratregion
5076572RH139253214171544808015448293Ratregion
5076572RH139253214171460780614608019Ratregion
5075276RH138501165171680391916804083Ratregion
5075428RH138588143172133964721339789Ratregion
5074874RH138268179171933826219338440Ratregion
5075768RH138786209171049671210496920Ratregion
5078020RH140095220172033368820333905Ratregion
5079848RH141238220171189427711894496Ratregion
5077930RH140042219171055539610555615Ratregion
5078588RH140430159171379801713798175Ratregion
5080032RH141344191171852206218522250Ratregion
5073096RH137235200171261438112614580Ratregion
5073934RH1377231951798612289861422Ratregion
5073970RH137744141171361548413615624Ratregion
5071848RH1353202051798172649817468Ratregion
5073514RH137480209172110404021104248Ratregion
5073788RH137639129171379304113793173Ratregion
5072342RH136794108171638169416381801Ratregion
5061738BF402796124171575099215751115Ratregion
5063338BF404113182171511520215115383Ratregion
5066654AU048229149171128843611288584Ratregion
5069662AU046352232171637560116375832Ratregion
5069146AU046695101171109041811090513Ratregion
5060182BF400649206171579975615799962Ratregion
5061940BE112196159171559479215594950Ratregion
5062382BE106621157171075774610757902Ratregion
5062458BF397915247171955738519557631Ratregion
5065632BE109502150171386468113864830Ratregion
5062812AW534611152171048678610486937Ratregion
5064108BE120617206171579599115796196Ratregion
5065880AA964229134171104672511046858Ratregion
5060146BE103912159171168928911689447Ratregion
5063690BE107980170171226153212261701Ratregion
5063836BE120016151171075284010752990Ratregion
5065232AA996831215171609917116099384Ratregion
5062386BE106629151171931158619311736Ratregion
5065618BF41262790171785257217852661Ratregion
5065796BE109885182171015296910153150Ratregion
5060766BE1044902071798401389840344Ratregion
5060810BF389188171171208004712080217Ratregion
5065942BE1162232201798435159843734Ratregion
5066074BE116739176171669308016693255Ratregion
5064794BE108513163171183075811830920Ratregion
5061458BE105217151171003425510034405Ratregion
5064798BE108539174171633481616334989Ratregion
5064906BF405276174171555804415558217Ratregion
5061546BE105422203171055310210553304Ratregion
5086260AI138122204171954338319543586Ratregion
5082553BF416265196171213399712134192Ratregion
5087826Drd1a103171110196211102064Ratregion
5088923AU048850276171967779819678067Ratregion
5088245AU048453165171621330116213465Ratregion
5083341BG374969186171160122311601408Ratregion
5088375AU048532298171813315518133452Ratregion
5090341AU049693148172044376520443912Ratregion
5081571BF414013234171816479718165030Ratregion
5084766AI411450182171970180119701982Ratregion
5088175AU048412215171206103412061248Ratregion
5080726RH141746194171841026518410458Ratregion
5080740RH1417542161798409959841209Ratregion
5080842RH141814181171553491715536049Ratregion
5080842RH141814181171469645014697582Ratregion
5085605BM384003171171325039113250561Ratregion
5085623Slc34a11641797478829748045Ratregion
5085707BE102659158171056711810567275Ratregion
5081420AI502631187171925005119250237Ratregion
5082695BF416660181171017681410176994Ratregion
5082711BG373710227171826664218266868Ratregion
5080742RH141755184171787064917870832Ratregion
5081178RH142010198171616531516165512Ratregion
5081497BF420045212172074685620747081Ratregion
5083813AA891724230171567382615674055Ratregion
5503484CLTB_4592613171055463310555245Ratregion
5507539G19714144171912444119124584Ratregion
5503466RGS14_30615881797783649778951Ratregion
5503925Idb41468171669366516695132Ratregion
5503724CPLX2_9184596171075759310758188Ratregion
5505333Barx1965171482508514826049Ratregion
5506374UniSTS:479010651171542155515422205Ratregion
5506374UniSTS:479010651171458151814582168Ratregion
5506817G46247231171316299713163227Ratregion
5506879G47094237171502431615024552Ratregion
5507017fj85b10.x1101171382171813821818Ratregion
5507303fc02h02.x1396171625865716259052Ratregion
5500121UniSTS:237015200171339156213391760Ratregion
5499505stSG6027320171589781715899483Ratregion
5500123UniSTS:237019240171227597412276213Ratregion
5500603RH1361832001798465449846743Ratregion
5501087PMC133998P70171669431716695126Ratregion
5501367G06234261171567367115673931Ratregion
5502680F122321797439399744256Ratregion
Position Markers

Flank 1: (D17Rat107)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0179,730,263 - 9,730,459RGD
Rnor_5.01711,839,249 - 11,839,443NCBI
RGSC_v3.41715,245,341 - 15,245,534RGD
RGSC_v3.11715,245,341 - 15,245,534RGD
RH 3.4 Map17 RGD
RH 3.4 Map17 UniSTS
RH 2.0 Map17 RGD
SHRSP x BN Map17 RGD
Peak: (D17Rat84)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01721,490,950 - 21,491,085NCBI
Rnor_5.01723,473,207 - 23,473,342UniSTS
RGSC_v3.41729,603,712 - 29,604,237RGD
RGSC_v3.41729,604,089 - 29,604,224UniSTS
RGSC_v3.11729,606,930 - 29,607,065RGD
Celera1723,324,112 - 23,324,238UniSTS
Cytogenetic Map17p12UniSTS
RH 3.4 Map17280.1UniSTS
RH 3.4 Map17280.1RGD
RH 2.0 Map17199.7RGD
SHRSP x BN Map1717.2899RGD
FHH x ACI Map1722.3299RGD
Flank 2: (D17Rat84)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01721,490,950 - 21,491,085NCBI
Rnor_5.01723,473,207 - 23,473,342UniSTS
RGSC_v3.41729,603,712 - 29,604,237RGD
RGSC_v3.41729,604,089 - 29,604,224UniSTS
RGSC_v3.11729,606,930 - 29,607,065RGD
Celera1723,324,112 - 23,324,238UniSTS
Cytogenetic Map17p12UniSTS
RH 3.4 Map17280.1UniSTS
RH 3.4 Map17280.1RGD
RH 2.0 Map17199.7RGD
SHRSP x BN Map1717.2899RGD
FHH x ACI Map1722.3299RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17124787908Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17132230361Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17133303755Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17138243814Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17163676140Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17173413148Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17173413148Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)1751977023422380Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1751977036283402Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)17333697224030841Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17333697224030841Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17333697237790462Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17333697263676140Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17333697273413148Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17333697273413148Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17333697273413148Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17341403928073589Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17471606727691136Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17471606727691136Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17519104750191047Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17519104750191047Rat
1581553Pur14Proteinuria QTL 145.30.0001total urine protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)17842446716620067Rat
1582224Epfw4Epididymal fat weight QTL 43.50.0058epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)17973026321491085Rat
1582225Bw67Body weight QTL 676.20.0001body mass (VT:0001259)body weight (CMO:0000012)17973026321491085Rat
1582226Bw64Body weight QTL 644.20.0017body mass (VT:0001259)body weight (CMO:0000012)17973026321491085Rat
1582241Bw70Body weight QTL 704.60.0003body mass (VT:0001259)body weight (CMO:0000012)17973026321491085Rat
1582245Bw73Body weight QTL 734.60.0004body mass (VT:0001259)body weight (CMO:0000012)17973026321491085Rat
1582258Bw76Body weight QTL 764.60.0005body mass (VT:0001259)body weight (CMO:0000012)17973026321491085Rat
1582199Insul5Insulin level QTL 53.40.0119blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)17973026321491085Rat
1582208Kidm32Kidney mass QTL 323.90.0018kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17973026321491085Rat
2303561Bw91Body weight QTL 912body mass (VT:0001259)body weight (CMO:0000012)17982730454827304Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)171052970942542027Rat
1549900Iddm20Insulin dependent diabetes mellitus QTL 203.7pancreas integrity trait (VT:0010560)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)171400967923316697Rat
1331720Rf43Renal function QTL 432.881kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)171574375522711729Rat
1331765Hrtrt15Heart rate QTL 154.094heart pumping trait (VT:2000009)heart rate (CMO:0000002)171574375561036897Rat
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171867614063676140Rat
1354659Scl68Serum cholesterol level QTL 683.9blood VLDL cholesterol amount (VT:0005144)blood very low density lipoprotein cholesterol level (CMO:0000648)171867614063676140Rat
7488966Bp370Blood pressure QTL 3700.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172149095062195822Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172149095066490950Rat
12903978Cm118Cardiac mass QTL 1180.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)172149095066490950Rat
12903979Cm119Cardiac mass QTL 1190.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172149095066490950Rat
12903980Cm120Cardiac mass QTL 1200.002heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)172149095066490950Rat
12903981Am17Aortic mass QTL 170.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)172149095066490950Rat
12903982Kidm70Kidney mass QTL 700.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)172149095074823273Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general QTL cluster on chr 17p12-14 incorporates all body weight linkages, kidney and epididymal fat pad weights and insulin level linkages after HSD feeding 1580752
qtl_statistics_details specific pairs of variables were compared by one or two way ANOVA with post hoc Tukey's honest significance difference test 1580752