Gene: Col6a6 (collagen type VI alpha 6 chain) Rattus norvegicus
Symbol: Col6a6
Name: collagen type VI alpha 6 chain
Description: PARTICIPATES IN cell-extracellular matrix signaling pathway; FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); INTERACTS WITH bisphenol A; diuron; endosulfan
Type: protein-coding
RefSeq Status: MODEL
Also known as: collagen alpha-6(VI) chain; collagen, type VI, alpha 6; LOC315979; RGD1309172; similar to matrilin 3b; similar to RIKEN cDNA E330026B02
Homo sapiens (human) : COL6A6 (collagen type VI alpha 6 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col6a6 (collagen, type VI, alpha 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col6a6 (collagen type VI alpha 6 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL6A6 (collagen type VI alpha 6 chain)
Canis lupus familiaris (dog) : COL6A6 (collagen type VI alpha 6 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col6a6 (collagen type VI alpha 6 chain)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.08114,352,130 - 114,449,993 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08113,727,475 - 113,872,124 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48110,793,849 - 110,892,578 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18110,810,892 - 110,935,930 (-)NCBI
Celera8105,644,636 - 105,799,150 (-)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
More on Col6a6
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309172
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2018-08-14
Status: ACTIVE