Fbln1 (fibulin 1) - Rat Genome Database

Name: Fbln1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Fbln1 (fibulin 1) Rattus norvegicus

Analyze

Symbol:

Fbln1

Name:

fibulin 1

RGD ID:

1308667

Description:

Predicted to enable several functions, including fibrinogen binding activity; fibronectin binding activity; and integrin binding activity. Predicted to be an extracellular matrix structural constituent. Involved in embryo implantation. Predicted to be located in basement membrane; elastic fiber; and extracellular space. Orthologous to human FBLN1 (fibulin 1); INTERACTS WITH 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate; 17beta-estradiol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

Fbln1 protein-like; fibulin-1; LOC100362423; LOC315191

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	FBLN1 (fibulin 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Fbln1 (fibulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Fbln1 (fibulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	FBLN1 (fibulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	FBLN1 (fibulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Fbln1 (fibulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	FBLN1 (fibulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	FBLN1 (fibulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Fbln1 (fibulin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	SCGB1D2 (secretoglobin family 1D member 2)	HGNC	OMA
Homo sapiens (human):	SCGB1D1 (secretoglobin family 1D member 1)	HGNC	OMA
Homo sapiens (human):	SCGB1D4 (secretoglobin family 1D member 4)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	FBLN1 (fibulin 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Fbln1 (fibulin 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	fbln1 (fibulin 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	fbl-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	fbln1	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	116,310,582 - 116,390,075 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	116,310,582 - 116,390,075 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	118,061,437 - 118,140,654 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	120,287,178 - 120,366,397 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	120,256,616 - 120,335,836 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	126,096,793 - 126,176,468 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	126,096,793 - 126,176,468 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	125,810,696 - 125,890,371 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	123,208,154 - 123,287,289 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	123,242,385 - 123,321,516 (+)	NCBI
Celera	7	112,608,514 - 112,687,953 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Autosomal Recessive Syndrome of Syndactyly, Undescended Testes and Central Nervous System Defects (ISO)

endometriosis (ISO)

fetal akinesia deformation sequence syndrome 1 (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Phelan-McDermid syndrome (ISO)

Prostatic Neoplasms (ISO)

Synpolydactyly 2 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP,ISO)

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (EXP,ISO)

17beta-estradiol 3-benzoate (EXP)

2,2',5,5'-tetrachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,4-methylenedioxymethamphetamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3-Nitrobenzanthrone (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

4-phenylbutyric acid (ISO)

5-azacytidine (ISO)

5-fluorouracil (ISO)

6-propyl-2-thiouracil (EXP)

6alpha-methylprednisolone (ISO)

8-Br-cAMP (ISO)

acetamide (EXP)

acrylamide (EXP,ISO)

aflatoxin B1 (EXP,ISO)

all-trans-retinoic acid (ISO)

amphotericin B (ISO)

arsenous acid (ISO)

azathioprine (ISO)

belinostat (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

butan-1-ol (ISO)

calcitriol (ISO)

cantharidin (ISO)

carbon nanotube (ISO)

cefaloridine (EXP)

chlormequat chloride (EXP)

chromium(6+) (ISO)

cobalt dichloride (ISO)

copper atom (EXP)

copper(0) (EXP)

copper(II) sulfate (ISO)

Cuprizon (EXP)

cytarabine (ISO)

decabromodiphenyl ether (EXP)

dexamethasone (ISO)

diarsenic trioxide (ISO)

dibenz[a,h]anthracene (ISO)

dioxygen (EXP,ISO)

diquat (ISO)

diuron (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

endosulfan (EXP)

ethanol (ISO)

folic acid (ISO)

fulvestrant (ISO)

furan (EXP)

genistein (ISO)

glycidyl methacrylate (ISO)

hydrogen cyanide (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

inulin (ISO)

isotretinoin (ISO)

ivermectin (ISO)

L-ascorbic acid (ISO)

medroxyprogesterone acetate (ISO)

menadione (ISO)

methapyrilene (ISO)

methotrexate (ISO)

methylmercury chloride (ISO)

microcystin-LR (EXP)

mifepristone (ISO)

monosodium L-glutamate (ISO)

N,N-diethyl-m-toluamide (EXP)

N-methyl-4-phenylpyridinium (ISO)

N-nitrosodiethylamine (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

PCB138 (EXP)

pentane-2,3-dione (EXP)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

permethrin (EXP)

phenobarbital (ISO)

phenylmercury acetate (ISO)

pioglitazone (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

potassium cyanide (ISO)

potassium dichromate (ISO)

prednisolone (ISO)

progesterone (ISO)

sarin (ISO)

SB 431542 (ISO)

selenium atom (ISO)

silicon dioxide (ISO)

sirolimus (EXP)

sodium arsenite (ISO)

sodium aurothiomalate (ISO)

Soman (EXP)

sulforaphane (ISO)

sunitinib (ISO)

tacrolimus hydrate (EXP)

temozolomide (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (EXP)

tetrachloromethane (EXP)

tetrathiomolybdate(2-) (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (ISO)

trichostatin A (ISO)

triclosan (ISO)

trimellitic anhydride (ISO)

tunicamycin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vitamin E (ISO)

vorinostat (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

blood coagulation, fibrin clot formation (ISO)

embryo implantation (IEP)

extracellular matrix organization (IBA,ISO)

integrin-mediated signaling pathway (ISO)

negative regulation of cell adhesion (ISO)

negative regulation of cell motility (ISO)

negative regulation of ERK1 and ERK2 cascade (ISO)

negative regulation of protein phosphorylation (ISO)

negative regulation of stem cell proliferation (ISO)

negative regulation of substrate adhesion-dependent cell spreading (ISO)

negative regulation of transforming growth factor beta production (ISO)

positive regulation of fibroblast proliferation (ISO)

positive regulation of gene expression (ISO)

positive regulation of substrate-dependent cell migration, cell attachment to substrate (ISO)

Cellular Component

basement membrane (ISO)

elastic fiber (ISO)

extracellular matrix (ISO)

extracellular space (ISO)

Molecular Function

calcium ion binding (ISO)

extracellular matrix structural constituent (ISO)

fibrinogen binding (ISO)

fibronectin binding (ISO)

identical protein binding (ISO)

integrin binding (ISO)

peptidase activator activity (ISO)

protein binding (ISO)

protein-containing complex binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Cycle-dependent endometrial expression and hormonal regulation of the fibulin-1 gene.	Haendler B, etal., Mol Reprod Dev. 2004 Jul;68(3):279-87.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation
9.	Age-related changes of cardiac gene expression following myocardial ischemia/reperfusion.	Simkhovich BZ, etal., Arch Biochem Biophys. 2003 Dec 15;420(2):268-78.

Additional References at PubMed

PMID:1400330	PMID:2269669	PMID:7534784	PMID:7642629	PMID:9278415	PMID:9927660	PMID:11238726	PMID:11792823	PMID:12200142	PMID:12477932	PMID:16061471	PMID:18757743
PMID:19609566	PMID:20551380	PMID:23376485	PMID:23533145	PMID:24006456	PMID:25661773	PMID:25834989	PMID:27068509	PMID:32640908

Genomics

Comparative Map Data

Fbln1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	7	116,310,582 - 116,390,075 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	116,310,582 - 116,390,075 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	118,061,437 - 118,140,654 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	120,287,178 - 120,366,397 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	120,256,616 - 120,335,836 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	126,096,793 - 126,176,468 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	126,096,793 - 126,176,468 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	125,810,696 - 125,890,371 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	123,208,154 - 123,287,289 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	123,242,385 - 123,321,516 (+)	NCBI
Celera	7	112,608,514 - 112,687,953 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

FBLN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	45,502,883 - 45,601,135 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	45,502,238 - 45,601,135 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	45,898,763 - 45,997,015 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	44,277,383 - 44,375,678 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	44,219,255 - 44,275,128	NCBI
Celera	22	29,809,689 - 29,909,644 (+)	NCBI		Celera
Cytogenetic Map	22	q13.31	NCBI
HuRef	22	28,859,953 - 28,942,412 (+)	NCBI		HuRef
CHM1_1	22	45,857,451 - 45,955,744 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	45,987,730 - 46,085,865 (+)	NCBI		T2T-CHM13v2.0

Fbln1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	85,090,150 - 85,170,495 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	85,090,150 - 85,170,736 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	85,205,949 - 85,286,294 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	85,205,949 - 85,286,535 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	85,036,438 - 85,116,724 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	85,033,777 - 85,113,422 (+)	NCBI		MGSCv36	mm8
Celera	15	87,331,933 - 87,412,210 (+)	NCBI		Celera
Cytogenetic Map	15	E2	NCBI
cM Map	15	40.27	NCBI

Fbln1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	29,837,134 - 29,912,222 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	29,837,134 - 29,911,313 (+)	NCBI	ChiLan1.0	ChiLan1.0

FBLN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	22	58,026,827 - 58,125,277 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	26,390,379 - 26,488,737 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	44,583,632 - 44,666,696 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	44,582,843 - 44,666,011 (+)	Ensembl	panpan1.1		panPan2

FBLN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	20,498,097 - 20,564,776 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	20,498,567 - 20,627,836 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	20,418,944 - 20,535,831 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	21,232,145 - 21,315,719 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	21,232,148 - 21,315,848 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	20,951,205 - 21,068,293 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	21,264,132 - 21,382,166 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	21,444,929 - 21,562,250 (-)	NCBI		UU_Cfam_GSD_1.0

Fbln1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	4,170,186 - 4,231,513 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936629	4,170,817 - 4,242,103 (-)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936629	4,170,186 - 4,242,100 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FBLN1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	3,839,502 - 3,927,183 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	3,839,498 - 3,927,178 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	1,071,068 - 1,158,743 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FBLN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	27,962,669 - 28,061,356 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	27,962,642 - 28,061,364 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	97,273,345 - 97,370,894 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fbln1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	4,109,478 - 4,190,066 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	4,109,478 - 4,189,987 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Fbln1
351 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	56
Count of miRNA genes:	45
Interacting mature miRNAs:	52
Transcripts:	ENSRNOT00000047234
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	41333674	119109060	Rat
1300179	Kidm5	Kidney mass QTL 5	3.51		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	43747012	135012528	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	44421311	118198041	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	64002457	135012528	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	69736226	117455174	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	73829340	130221005	Rat
7411654	Foco25	Food consumption QTL 25	9.3	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
7411607	Foco15	Food consumption QTL 15		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	75918751	120918751	Rat
1331728	Bp214	Blood pressure QTL 214	2.825		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	80221299	124373579	Rat
1331768	Kidm10	Kidney mass QTL 10	4.62096		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	80221299	125221299	Rat
2317052	Aia17	Adjuvant induced arthritis QTL 17	2.13		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	7	81737938	126737938	Rat
634322	Bw12	Body weight QTL 12	0		body mass (VT:0001259)	body weight (CMO:0000012)	7	83153392	128153392	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat
71114	Niddm14	Non-insulin dependent diabetes mellitus QTL 14	4.5		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	7	84257275	129257275	Rat
2298475	Eau6	Experimental allergic uveoretinitis QTL 6		0.0029	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	7	84257275	129257275	Rat
1558655	Swd4	Spike wave discharge measurement QTL 4	3.68	0.0002	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge severity grade (CMO:0001988)	7	86983365	131983365	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	90482196	135012528	Rat
2299163	Iddm34	Insulin dependent diabetes mellitus QTL 34	2.71		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	7	91281130	135012528	Rat
631687	Hcas1	Hepatocarcinoma susceptibility QTL 1	3.9	0.001	liver integrity trait (VT:0010547)	liver tumorous lesion volume to total liver volume ratio (CMO:0001082)	7	91412594	129807172	Rat
2313102	Bmd79	Bone mineral density QTL 79	2.3	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	7	94811085	116738842	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	96670164	135012528	Rat
1331731	Bp216	Blood pressure QTL 216	2.851		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	102297359	133492884	Rat
70159	Bp61	Blood pressure QTL 61		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	103146217	116738842	Rat
731174	Uae23	Urinary albumin excretion QTL 23	2.4	0.0042	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	7	104603555	135012528	Rat
2306821	Bp335	Blood pressure QTL 335		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	106571501	135012528	Rat
631663	Bw6	Body weight QTL 6	3.4		body mass (VT:0001259)	body weight (CMO:0000012)	7	111075573	134976056	Rat
1300112	Bp183	Blood pressure QTL 183	3.51		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	111182207	135012528	Rat
1331748	Bp215	Blood pressure QTL 215	4.043		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	112308254	133492884	Rat
1357339	Stl14	Serum triglyceride level QTL 14	3.45	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	112729683	133492707	Rat

Markers in Region

AW524050

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	116,347,866 - 116,347,966 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	126,134,080 - 126,134,179	NCBI	Rnor6.0
Rnor_5.0	7	125,847,983 - 125,848,082	UniSTS	Rnor5.0
RGSC_v3.4	7	123,245,143 - 123,245,242	UniSTS	RGSC3.4
Celera	7	112,645,795 - 112,645,894	UniSTS
RH 3.4 Map	7	908.6	UniSTS
Cytogenetic Map	7	q34	UniSTS

Fbln1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	116,355,006 - 116,355,418 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	126,141,220 - 126,141,631	NCBI	Rnor6.0
Rnor_5.0	7	125,855,123 - 125,855,534	UniSTS	Rnor5.0
RGSC_v3.4	7	123,252,283 - 123,252,694	UniSTS	RGSC3.4
Celera	7	112,652,935 - 112,653,346	UniSTS
Cytogenetic Map	7	q34	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	43	8	6	9	6			71	24	34	11
Low			49	35	10	35	8	11	3	11	7		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001127547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC161973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000047234 ⟹ ENSRNOP00000046622

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	116,310,582 - 116,390,069 (+)	Ensembl
Rnor_6.0 Ensembl	7	126,096,793 - 126,176,468 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000088042 ⟹ ENSRNOP00000070552

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	116,310,582 - 116,383,452 (+)	Ensembl
Rnor_6.0 Ensembl	7	126,096,831 - 126,141,636 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000102556 ⟹ ENSRNOP00000089007

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	116,324,600 - 116,390,075 (+)	Ensembl

RefSeq Acc Id:

NM_001127547 ⟹ NP_001121019

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	116,310,582 - 116,390,075 (+)	NCBI
Rnor_6.0	7	126,096,793 - 126,176,468 (+)	NCBI
Rnor_5.0	7	125,810,696 - 125,890,371 (+)	NCBI
RGSC_v3.4	7	123,208,154 - 123,287,289 (+)	RGD
Celera	7	112,608,514 - 112,687,953 (+)	RGD

Sequence:

show sequence

CCTCCTCCGGGCGGGATAATTGAACGCGGCGCGCAGGAGACTTGCGTTGGCTGCCCAGGCCCGG
CTTGATCGTGTAGCGGCTGCCCGCCGTGCTTTTGTCCGCCGCCCGAGCCCGCCAGCCCCAATGG
AGCGCCCCGCGCCGTCGCGCCTCGTCCCGCTGCCGCTGCTGCTGCTCGGCAGCCTCTCGCTGCT
GGCGGCCCGAGCGAATGCAGACATCTCCATGGAGGCTTGCTGCACGGAGGGAAATCAAATGGCT
AACCAGCACAGGGACTGCTCGCTCTCCTACACCTCAGAATCCAAGGAGTGCAGGATGGTCCAGG
AACAGTGTTGTCACAACCAACTGGAGGAGCTGCACTGTGCCACAGGCATCAACCTGGCCAGCGA
ACCAGACGGCTGCGCCTCCCTCCACAACTACAACAGTAGCCTCGAGACCATCTTCATAAAGAGG
TGCTGCCACTGTTGCATGCTGGGAAGGGCAGCCCAGGCCCGAGGCCAGACCTGTGAGCCCAACC
TCATGATAAGCTACCAGTGTGGACTGGTATTCCGTGCCTGCTGCGTGAAGGGACAGGAGAATTC
AGACTTTGTCAGAGGCGATGGTACGGACCTTCAGGACCCAGCTAAGATTCCTGAGGAGGAGGAA
CAAGAAGACCCATACCTGAACGACCGCTGTCGAGGTGGCGGGCCCTGTAAGCAGCAGTGCCGTG
ACACTGGGGATGAGGTCATCTGCTCTTGCTTTGTGGGCTACCAGCTGCAGTCGGATGGTGTCTC
CTGTGAAGATATCAATGAATGCATCACCGGCAGCCATAACTGCCGGCTGGGAGAATCCTGCATC
AACACAGTGGGCTCTTTCCGCTGCCAGCGGGACAGCAGCTGTGGGACTGGCTATGAGCTCACAG
AGGATAATAACTGCAAAGATATTGACGAGTGTGAGACTGGTATTCATAACTGCCCCCCCGATTT
TATCTGTCAGAATACTCTGGGATCCTTCCGTTGCAGACCCAAGCTGCAGTGCAAGAGCGGCTTT
ATACAGGATGCTCTAGGCAACTGCATTGATATCAATGAGTGTTTAAGTATCAGTGCCCCATGCC
CTGTGGGGCAGACATGCATCAATACAGAGGGCTCCTATACATGTCAGAAGAATGTGCCCAACTG
TGGCCGTGGATATCATCTCAACGAAGAGGGGACCCGCTGTGTTGACGTGGATGAGTGCTCACCA
CCAGCCGAGCCCTGTGGGAAGGGACACCACTGTTTGAACTCCCCCGGCAGCTTCCGCTGCGAGT
GCAAGGCCGGGTACTATTTTGATGGCATCAGCAGGACCTGTGTGGATATCAACGAGTGCCAGCG
CTATCCTGGGCGCCTGTGTGGCCACAAGTGTGAGAACACGCCAGGCTCCTACCACTGCAGCTGC
TCTGCGGGCTTCCGGCTGTCTGTGGACGGCCGGTCTTGTGAAGACGTGAACGAGTGCCTTAACA
GCCCTTGCAGCCAGGAGTGTGCTAACGTCTATGGCTCCTACCAGTGCTACTGCCGACGAGGTTA
TCAGCTCAGTGACGTGGACGGGGTCACCTGCGAAGATATTGATGAGTGTGCCCTGCCCACGGGG
GGTCACATCTGCTCCTACCGCTGCATCAACATCCCGGGAAGCTTCCAGTGCAGCTGTCCCTCAT
CCGGCTACAGGCTAGCTCCCAATGGTCGCAACTGCCAAGACATTGACGAGTGTGTGACCGGTAT
CCACAACTGTTCCATCAACGAGACCTGCTTCAACATCCAGGGCAGCTTCCGCTGTCTATCCTTC
GAGTGCCCTGAGAACTATCGCCGCTCTGCAGACACCTTTCGCCAAGAGAAGACAGACACCGTCC
GCTGCATCAAGTCTTGCCGTCCCACCGATGAGGCCTGCATGCGGGACCCTGTGCATACCGTCTC
CCACACTGTCATCTCCCTGCCCACCTTCCGAGAGTTCACCCGTCCGGAGGAGATCATCTTTCTG
AGGGCTGTCACGCCGCTGTATCCTGCCAACCAGGCTGACATCATCTTCGACATCACAGAAGGGA
ACCTTCGAGACTCCTTTGATATCATCAAGCGCTATGAGGACGGCATGACTGTGGGTGTCGTGCG
CCAAGTGCGGCCCATCGTGGGCCCATTTTATGCCGTCCTGAAGCTGGAGATGAACTACGTGTTG
GGAGGCGTGGTTTCCCACCGGAACGTCGTCAATGTGCATATCTTTGTCTCTGAGTACTGGTTCT
GAGGACCGGTTTGCAGCACGGCCAGGAGTGTACCCCTCCGCCTGGCCACGCCCTTGCTCCCAGT
GACTGCCAGGTGCCTGTCTGTACCCCTCGGGCGTTCCTTGGTGTTTCATGTTGGTTTGTAAGGC
CACATACATTAAGCTGAGCCACGTCACTTAAGTCCAGCTGACGTACTGTGCTGTTTAAACATTG
CTCAGTCATGTGGTTAAATCCTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGCAAAG
GTCGAATTTTATTCTCTTTCCCTGCCTGTGGGCTAGGCAATGCTAAGGACCAATTGAAGGAGTT
TTCAAAGCAGCGCTCCACCCAAGAGCCAAGAGGTAGCCCTTCTCACTGAGTCTGCTTAAGGGGT
GACATTTTGGTACATATATATATATATATATATATATATATATATATATATATATATATATGAA
TATGAATGAGAAAAACCAACTGGGCTCTGTGTGCTTCAAACTGATGGCTGCTGTAGAGCGGTGC
ATAAATAAATATACAATAAATTCTCCCCAGAAGCA

hide sequence

RefSeq Acc Id:

XM_006242161 ⟹ XP_006242223

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	7	116,310,587 - 116,355,430 (+)	NCBI
Rnor_6.0	7	126,096,813 - 126,141,643 (+)	NCBI
Rnor_5.0	7	125,810,696 - 125,890,371 (+)	NCBI

Sequence:

show sequence

TGAACGCGGCGCGCAGGAGACTTGCGTTGGCTGCCCAGGCCCGGCTTGATCGTGTAGCGGCTGC
CCGCCGTGCTTTTGTCCGCCGCCCGAGCCCGCCAGCCCCAATGGAGCGCCCCGCGCCGTCGCGC
CTCGTCCCGCTGCCGCTGCTGCTGCTCGGCAGCCTCTCGCTGCTGGCGGCCCGAGCGAATGCAG
ACATCTCCATGGAGGCTTGCTGCACGGAGGGAAATCAAATGGCTAACCAGCACAGGGACTGCTC
GCTCTCCTACACCTCAGAATCCAAGGAGTGCAGGATGGTCCAGGAACAGTGTTGTCACAACCAA
CTGGAGGAGCTGCACTGTGCCACAGGCATCAACCTGGCCAGCGAACCAGACGGCTGCGCCTCCC
TCCACAACTACAACAGTAGCCTCGAGACCATCTTCATAAAGAGGTGCTGCCACTGTTGCATGCT
GGGAAGGGCAGCCCAGGCCCGAGGCCAGACCTGTGAGCCCAACCTCATGATAAGCTACCAGTGT
GGACTGGTATTCCGTGCCTGCTGCGTGAAGGGACAGGAGAATTCAGACTTTGTCAGAGGCGATG
GTACGGACCTTCAGGACCCAGCTAAGATTCCTGAGGAGGAGGAACAAGAAGACCCATACCTGAA
CGACCGCTGTCGAGGTGGCGGGCCCTGTAAGCAGCAGTGCCGTGACACTGGGGATGAGGTCATC
TGCTCTTGCTTTGTGGGCTACCAGCTGCAGTCGGATGGTGTCTCCTGTGAAGATATCAATGAAT
GCATCACCGGCAGCCATAACTGCCGGCTGGGAGAATCCTGCATCAACACAGTGGGCTCTTTCCG
CTGCCAGCGGGACAGCAGCTGTGGGACTGGCTATGAGCTCACAGAGGATAATAACTGCAAAGAT
ATTGACGAGTGTGAGACTGGTATTCATAACTGCCCCCCCGATTTTATCTGTCAGAATACTCTGG
GATCCTTCCGTTGCAGACCCAAGCTGCAGTGCAAGAGCGGCTTTATACAGGATGCTCTAGGCAA
CTGCATTGATATCAATGAGTGTTTAAGTATCAGTGCCCCATGCCCTGTGGGGCAGACATGCATC
AATACAGAGGGCTCCTATACATGTCAGAAGAATGTGCCCAACTGTGGCCGTGGATATCATCTCA
ACGAAGAGGGGACCCGCTGTGTTGACGTGGATGAGTGCTCACCACCAGCCGAGCCCTGTGGGAA
GGGACACCACTGTTTGAACTCCCCCGGCAGCTTCCGCTGCGAGTGCAAGGCCGGGTACTATTTT
GATGGCATCAGCAGGACCTGTGTGGATATCAACGAGTGCCAGCGCTATCCTGGGCGCCTGTGTG
GCCACAAGTGTGAGAACACGCCAGGCTCCTACCACTGCAGCTGCTCTGCGGGCTTCCGGCTGTC
TGTGGACGGCCGGTCTTGTGAAGACGTGAACGAGTGCCTTAACAGCCCTTGCAGCCAGGAGTGT
GCTAACGTCTATGGCTCCTACCAGTGCTACTGCCGACGAGGTTATCAGCTCAGTGACGTGGACG
GGGTCACCTGCGAAGATATTGATGAGTGTGCCCTGCCCACGGGGGGTCACATCTGCTCCTACCG
CTGCATCAACATCCCGGGAAGCTTCCAGTGCAGCTGTCCCTCATCCGGCTACAGGCTAGCTCCC
AATGGTCGCAACTGCCAAGACATTGACGAGTGTGTGACCGGTATCCACAACTGTTCCATCAACG
AGACCTGCTTCAACATCCAGGGCAGCTTCCGCTGTCTATCCTTCGAGTGCCCTGAGAACTATCG
CCGCTCTGCAGACACCCGCTGTGAGCGCTTGCCTTGCCATGAGAACCAGGAGTGCCCCAGGCTG
CCTCTGAGAATAACCTACTACCACCTCTCTTTCCCCACCAACATCCAAGTGCCCGCGGTGGTTT
TCCGCATGGGCCCTTCCAGTGCTGTCCCTGGGGACAGCATGCAGCTGGCCATCACCGCTGGCAA
TGAGGAGGGCTTTTTCACCACCCGAAAGGTGAGCCACCACAGTGGGGTGGTGGCCCTCACCAGG
CCCATCCCTGAGCCCAGGGACTTGCTCCTGACCGTCACGATGGATCTTTATCGCCACGGCACAG
TCAGCTCCTTTGTGGCCAAGCTTTATATTTTCGTGTTTGCAGAGCTCTGAGTGCTTGCTTGGGT
CCTGGGCACTCCCTCTTGTTGCTTTCCCACCCTCGGGGTTCTAATAAACTCGCAGCAGCCATCC
CAAGAGCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001121019	(Get FASTA)	NCBI Sequence Viewer
	XP_006242223	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI61973	(Get FASTA)	NCBI Sequence Viewer
	EDM15584	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001121019 ⟸ NM_001127547
- Peptide Label:	precursor
- UniProtKB:	D3ZQ25 (UniProtKB/TrEMBL), A6HTD8 (UniProtKB/TrEMBL), A0A0G2JY81 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERPAPSRLVPLPLLLLGSLSLLAARANADISMEACCTEGNQMANQHRDCSLSYTSESKECRMV QEQCCHNQLEELHCATGINLASEPDGCASLHNYNSSLETIFIKRCCHCCMLGRAAQARGQTCEP NLMISYQCGLVFRACCVKGQENSDFVRGDGTDLQDPAKIPEEEEQEDPYLNDRCRGGGPCKQQC RDTGDEVICSCFVGYQLQSDGVSCEDINECITGSHNCRLGESCINTVGSFRCQRDSSCGTGYEL TEDNNCKDIDECETGIHNCPPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAP CPVGQTCINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECSPPAEPCGKGHHCLNSPGSFRC ECKAGYYFDGISRTCVDINECQRYPGRLCGHKCENTPGSYHCSCSAGFRLSVDGRSCEDVNECL NSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCINIPGSFQCSCP SSGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGSFRCLSFECPENYRRSADTFRQEKTDT VRCIKSCRPTDEACMRDPVHTVSHTVISLPTFREFTRPEEIIFLRAVTPLYPANQADIIFDITE GNLRDSFDIIKRYEDGMTVGVVRQVRPIVGPFYAVLKLEMNYVLGGVVSHRNVVNVHIFVSEYW F hide sequence

RefSeq Acc Id:	XP_006242223 ⟸ XM_006242161
- Peptide Label:	isoform X1
- UniProtKB:	B1WC21 (UniProtKB/TrEMBL), D3ZQ25 (UniProtKB/TrEMBL)
- Sequence:	show sequence MERPAPSRLVPLPLLLLGSLSLLAARANADISMEACCTEGNQMANQHRDCSLSYTSESKECRMV QEQCCHNQLEELHCATGINLASEPDGCASLHNYNSSLETIFIKRCCHCCMLGRAAQARGQTCEP NLMISYQCGLVFRACCVKGQENSDFVRGDGTDLQDPAKIPEEEEQEDPYLNDRCRGGGPCKQQC RDTGDEVICSCFVGYQLQSDGVSCEDINECITGSHNCRLGESCINTVGSFRCQRDSSCGTGYEL TEDNNCKDIDECETGIHNCPPDFICQNTLGSFRCRPKLQCKSGFIQDALGNCIDINECLSISAP CPVGQTCINTEGSYTCQKNVPNCGRGYHLNEEGTRCVDVDECSPPAEPCGKGHHCLNSPGSFRC ECKAGYYFDGISRTCVDINECQRYPGRLCGHKCENTPGSYHCSCSAGFRLSVDGRSCEDVNECL NSPCSQECANVYGSYQCYCRRGYQLSDVDGVTCEDIDECALPTGGHICSYRCINIPGSFQCSCP SSGYRLAPNGRNCQDIDECVTGIHNCSINETCFNIQGSFRCLSFECPENYRRSADTRCERLPCH ENQECPRLPLRITYYHLSFPTNIQVPAVVFRMGPSSAVPGDSMQLAITAGNEEGFFTTRKVSHH SGVVALTRPIPEPRDLLLTVTMDLYRHGTVSSFVAKLYIFVFAEL hide sequence

RefSeq Acc Id:

ENSRNOP00000046622 ⟸ ENSRNOT00000047234

RefSeq Acc Id:

ENSRNOP00000070552 ⟸ ENSRNOT00000088042

RefSeq Acc Id:

ENSRNOP00000089007 ⟸ ENSRNOT00000102556

Protein Domains

Anaphylatoxin-like EGF-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZQ25-F1-model_v2	AlphaFold	D3ZQ25	1-705	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1308667	AgrOrtholog
BioCyc Gene	G2FUF-32556	BioCyc
Ensembl Genes	ENSRNOG00000014137	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000046622	ENTREZGENE
	ENSRNOP00000046622.4	UniProtKB/TrEMBL
	ENSRNOP00000070552.2	UniProtKB/TrEMBL
	ENSRNOP00000089007	ENTREZGENE
	ENSRNOP00000089007.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000047234	ENTREZGENE
	ENSRNOT00000047234.5	UniProtKB/TrEMBL
	ENSRNOT00000088042.2	UniProtKB/TrEMBL
	ENSRNOT00000102556	ENTREZGENE
	ENSRNOT00000102556.1	UniProtKB/TrEMBL
Gene3D-CATH	Laminin	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:9029287	IMAGE-MGC_LOAD
InterPro	Anaphylatoxin/fibulin	UniProtKB/TrEMBL
	cEGF	UniProtKB/TrEMBL
	EGF-type_Asp/Asn_hydroxyl_site	UniProtKB/TrEMBL
	EGF_3	UniProtKB/TrEMBL
	EGF_Ca-bd	UniProtKB/TrEMBL
	EGF_Ca-bd_CS	UniProtKB/TrEMBL
	Fibulin-1	UniProtKB/TrEMBL
	Growth_fac_rcpt_N_dom	UniProtKB/TrEMBL
KEGG Report	rno:315191	UniProtKB/TrEMBL
MGC_CLONE	MGC:187782	IMAGE-MGC_LOAD
NCBI Gene	315191	ENTREZGENE
PANTHER	EGF-LIKE DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	FIBULIN-1	UniProtKB/TrEMBL
	PA14 DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	VACUOLAR-SORTING RECEPTOR 3-RELATED	UniProtKB/TrEMBL
Pfam	cEGF	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
PhenoGen	Fbln1	PhenoGen
PIRSF	Fibulin-1	UniProtKB/TrEMBL
PROSITE	ANAPHYLATOXIN_1	UniProtKB/TrEMBL
	ANAPHYLATOXIN_2	UniProtKB/TrEMBL
	ASX_HYDROXYL	UniProtKB/TrEMBL
	EGF_2	UniProtKB/TrEMBL
	EGF_3	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
SMART	ANATO	UniProtKB/TrEMBL
	EGF	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
Superfamily-SCOP	EGF/Laminin	UniProtKB/TrEMBL
	SSF57184	UniProtKB/TrEMBL
UniProt	A0A0G2JY81	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AAN5_RAT	UniProtKB/TrEMBL
	A6HTD8	ENTREZGENE, UniProtKB/TrEMBL
	B1WC21	ENTREZGENE, UniProtKB/TrEMBL
	D3ZQ25	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-07-29	Fbln1	fibulin 1	LOC100362423	Fbln1 protein-like	Data Merged	737654	PROVISIONAL
2010-05-05	LOC100362423	Fbln1 protein-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-04-30	Fbln1	fibulin 1	Fbln1_predicted	fibulin 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Fbln1_predicted	fibulin 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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