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Gene: Adamtsl5 (ADAMTS-like 5) Rattus norvegicus
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Symbol: Adamtsl5
Name: ADAMTS-like 5
Description: Predicted to have heparin binding activity. Predicted to localize to the microfibril. Orthologous to human ADAMTSL5 (ADAMTS like 5); INTERACTS WITH acrylamide; bisphenol A; diuron.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ADAMTS-like protein 5; LOC314626; thrombospondin, type I domain containing 6; Thsd6
Orthologs:
Homo sapiens (human) : ADAMTSL5 (ADAMTS like 5)  HGNC  Alliance
Mus musculus (house mouse) : Adamtsl5 (ADAMTS-like 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Adamtsl5 (ADAMTS like 5)
Pan paniscus (bonobo/pygmy chimpanzee) : ADAMTSL5 (ADAMTS like 5)
Canis lupus familiaris (dog) : ADAMTSL5 (ADAMTS like 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Adamtsl5 (ADAMTS like 5)
Sus scrofa (pig) : ADAMTSL5 (ADAMTS like 5)
Chlorocebus sabaeus (African green monkey) : ADAMTSL5 (ADAMTS like 5)
Heterocephalus glaber (naked mole-rat) : Adamtsl5 (ADAMTS like 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0712,228,706 - 12,237,382 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl712,229,379 - 12,234,576 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0712,398,544 - 12,407,177 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4710,874,586 - 10,879,783 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1710,874,856 - 10,881,378 (+)NCBI
Celera77,540,043 - 7,545,236 (+)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Adamtsl5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305607
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.