Symbol:
Chad
Name:
chondroadherin
RGD ID:
2336
Description:
Involved in cartilage condensation. Predicted to be located in membrane. Predicted to be active in extracellular matrix and extracellular space. Orthologous to human CHAD (chondroadherin); PARTICIPATES IN cell-extracellular matrix signaling pathway; INTERACTS WITH 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
cartilage leucine-rich protein
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
CHAD (chondroadherin) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Chad (chondroadherin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Chad (chondroadherin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
CHAD (chondroadherin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
CHAD (chondroadherin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Chad (chondroadherin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
CHAD (chondroadherin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
CHAD (chondroadherin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Chad (chondroadherin) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
CHAD (chondroadherin)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Chad (chondroadherin)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
chad (chondroadherin)
Alliance
DIOPT (Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
tol-1
Alliance
DIOPT (Ensembl Compara|PANTHER)
Caenorhabditis elegans (roundworm):
lron-8
Alliance
DIOPT (InParanoid|PANTHER)
Xenopus tropicalis (tropical clawed frog):
chad
Alliance
DIOPT (Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 80,009,045 - 80,012,816 (+) NCBI GRCr8 mRatBN7.2 10 79,512,170 - 79,515,941 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 79,511,931 - 79,515,940 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 84,116,871 - 84,120,642 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 83,614,977 - 83,618,748 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 79,129,976 - 79,133,747 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 82,290,296 - 82,296,146 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 82,292,110 - 82,296,651 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 82,109,902 - 82,115,752 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 83,201,982 - 83,205,753 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 10 83,216,351 - 83,220,122 (+) NCBI Celera 10 78,299,492 - 78,303,263 (+) NCBI Celera Cytogenetic Map 10 q26 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Chad Rat 17alpha-ethynylestradiol multiple interactions ISO RGD:737572 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of CHAD mRNA CTD PMID:17942748 Chad Rat 17beta-estradiol 3-benzoate increases methylation EXP 6480464 estradiol 3-benzoate results in increased methylation of CHAD promoter CTD PMID:27415467 Chad Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO RGD:737572 6480464 Tetrachlorodibenzodioxin affects the expression of CHAD mRNA CTD PMID:20702594 Chad Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of CHAD mRNA CTD PMID:33387578 Chad Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO RGD:737572 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of CHAD mRNA CTD PMID:17942748 Chad Rat 2,3,7,8-Tetrachlorodibenzofuran affects expression ISO RGD:737572 6480464 2,3,7,8-tetrachlorodibenzofuran affects the expression of CHAD mRNA CTD PMID:20702594 Chad Rat 2,3,7,8-Tetrachlorodibenzofuran decreases expression EXP 6480464 2,3,7,8-tetrachlorodibenzofuran results in decreased expression of CHAD mRNA CTD PMID:32109520 Chad Rat 3,3',4,4',5-pentachlorobiphenyl affects expression ISO RGD:737572 6480464 3,4,5,3',4'-pentachlorobiphenyl affects the expression of CHAD mRNA CTD PMID:20702594 Chad Rat 3,3',4,4',5-pentachlorobiphenyl increases expression EXP 6480464 3,4,5,3',4'-pentachlorobiphenyl results in increased expression of CHAD mRNA CTD PMID:32119087 Chad Rat 4,4'-sulfonyldiphenol decreases methylation ISO RGD:737572 6480464 bisphenol S results in decreased methylation of CHAD promoter CTD PMID:33297965 Chad Rat 4,4'-sulfonyldiphenol affects methylation ISO RGD:737572 6480464 bisphenol S affects the methylation of CHAD gene CTD PMID:31683443 Chad Rat 6-propyl-2-thiouracil decreases expression EXP 6480464 Propylthiouracil results in decreased expression of CHAD mRNA CTD PMID:24780913 Chad Rat ammonium chloride affects expression EXP 6480464 Ammonium Chloride affects the expression of CHAD mRNA CTD PMID:16483693 Chad Rat arsane affects methylation ISO RGD:734435 6480464 Arsenic affects the methylation of CHAD gene CTD PMID:25304211 Chad Rat arsenic atom affects methylation ISO RGD:734435 6480464 Arsenic affects the methylation of CHAD gene CTD PMID:25304211 Chad Rat arsenous acid decreases expression ISO RGD:737572 6480464 Arsenic Trioxide results in decreased expression of CHAD mRNA CTD PMID:35676786 Chad Rat Benzo[ghi]perylene increases expression ISO RGD:737572 6480464 1,12-benzoperylene results in increased expression of CHAD mRNA CTD PMID:26377693 Chad Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of CHAD mRNA CTD PMID:25181051 Chad Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of CHAD mRNA CTD PMID:36779543 Chad Rat buta-1,3-diene decreases expression ISO RGD:737572 6480464 1,3-butadiene results in decreased expression of CHAD mRNA CTD PMID:29038090 Chad Rat C60 fullerene decreases expression EXP 6480464 fullerene C60 results in decreased expression of CHAD mRNA CTD PMID:19167457 Chad Rat cadmium atom multiple interactions ISO RGD:734435 6480464 [Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of CHAD more ... CTD PMID:35301059 Chad Rat cadmium dichloride decreases expression ISO RGD:734435 6480464 Cadmium Chloride results in decreased expression of CHAD mRNA CTD PMID:21457566 Chad Rat cadmium dichloride multiple interactions ISO RGD:734435 6480464 [Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of CHAD more ... CTD PMID:35301059 Chad Rat cadmium dichloride decreases expression EXP 6480464 Cadmium Chloride results in decreased expression of CHAD mRNA CTD PMID:33453195 Chad Rat carbon nanotube decreases expression ISO RGD:737572 6480464 Nanotubes, Carbon analog results in decreased expression of CHAD mRNA; Nanotubes, Carbon results in decreased more ... CTD PMID:25554681 Chad Rat copper atom increases expression EXP 6480464 Copper deficiency results in increased expression of CHAD mRNA CTD PMID:26033743 Chad Rat copper(0) increases expression EXP 6480464 Copper deficiency results in increased expression of CHAD mRNA CTD PMID:26033743 Chad Rat Cuprizon increases expression EXP 6480464 Cuprizone results in increased expression of CHAD mRNA CTD PMID:26577399 Chad Rat diarsenic trioxide decreases expression ISO RGD:737572 6480464 Arsenic Trioxide results in decreased expression of CHAD mRNA CTD PMID:35676786 Chad Rat dimethylarsinic acid multiple interactions ISO RGD:737572 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results more ... CTD PMID:34876320 Chad Rat doxorubicin increases expression ISO RGD:734435 6480464 Doxorubicin results in increased expression of CHAD mRNA CTD PMID:37062353 Chad Rat fonofos increases methylation ISO RGD:734435 6480464 Fonofos results in increased methylation of CHAD promoter CTD PMID:22847954 Chad Rat gentamycin decreases expression EXP 6480464 Gentamicins results in decreased expression of CHAD mRNA CTD PMID:33387578 Chad Rat methylarsonic acid multiple interactions ISO RGD:737572 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results more ... CTD PMID:34876320 Chad Rat naphthalene decreases expression EXP 6480464 naphthalene analog results in decreased expression of CHAD mRNA CTD PMID:24976557 Chad Rat okadaic acid decreases expression ISO RGD:734435 6480464 Okadaic Acid results in decreased expression of CHAD mRNA CTD PMID:38832940 Chad Rat ozone multiple interactions ISO RGD:737572 6480464 [Air Pollutants results in increased abundance of Ozone] which results in decreased expression of CHAD more ... CTD PMID:34911549 Chad Rat paracetamol affects expression ISO RGD:737572 6480464 Acetaminophen affects the expression of CHAD mRNA CTD PMID:17562736 Chad Rat paracetamol decreases expression EXP 6480464 Acetaminophen results in decreased expression of CHAD mRNA CTD PMID:33387578 Chad Rat paracetamol decreases expression ISO RGD:734435 6480464 Acetaminophen results in decreased expression of CHAD mRNA CTD PMID:22230336 Chad Rat parathion increases methylation ISO RGD:734435 6480464 Parathion results in increased methylation of CHAD promoter CTD PMID:22847954 Chad Rat S-nitrosoglutathione decreases expression ISO RGD:734435 6480464 S-Nitrosoglutathione results in decreased expression of CHAD mRNA CTD PMID:38825487 Chad Rat silver atom increases expression ISO RGD:737572 6480464 Silver results in increased expression of CHAD mRNA CTD PMID:27131904 Chad Rat silver(0) increases expression ISO RGD:737572 6480464 Silver results in increased expression of CHAD mRNA CTD PMID:27131904 Chad Rat sodium arsenate multiple interactions ISO RGD:737572 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results more ... CTD PMID:34876320 Chad Rat sodium arsenite decreases expression ISO RGD:734435 6480464 sodium arsenite results in decreased expression of CHAD mRNA CTD PMID:29301061 Chad Rat sodium arsenite multiple interactions ISO RGD:737572 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results more ... CTD PMID:34876320 Chad Rat terbufos increases methylation ISO RGD:734435 6480464 terbufos results in increased methylation of CHAD promoter CTD PMID:22847954 Chad Rat titanium dioxide decreases expression ISO RGD:737572 6480464 titanium dioxide results in decreased expression of CHAD mRNA CTD PMID:23557971 Chad Rat trichloroethene decreases expression EXP 6480464 Trichloroethylene results in decreased expression of CHAD mRNA CTD PMID:33387578 Chad Rat triclosan decreases expression ISO RGD:734435 6480464 Triclosan results in decreased expression of CHAD mRNA CTD PMID:30510588 Chad Rat valproic acid affects expression ISO RGD:737572 6480464 Valproic Acid affects the expression of CHAD mRNA CTD PMID:17963808
Imported Annotations - KEGG (archival)
17alpha-ethynylestradiol (ISO) 17beta-estradiol 3-benzoate (EXP) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,3,7,8-Tetrachlorodibenzofuran (EXP,ISO) 3,3',4,4',5-pentachlorobiphenyl (EXP,ISO) 4,4'-sulfonyldiphenol (ISO) 6-propyl-2-thiouracil (EXP) ammonium chloride (EXP) arsane (ISO) arsenic atom (ISO) arsenous acid (ISO) Benzo[ghi]perylene (ISO) bisphenol A (EXP) buta-1,3-diene (ISO) C60 fullerene (EXP) cadmium atom (ISO) cadmium dichloride (EXP,ISO) carbon nanotube (ISO) copper atom (EXP) copper(0) (EXP) Cuprizon (EXP) diarsenic trioxide (ISO) dimethylarsinic acid (ISO) doxorubicin (ISO) fonofos (ISO) gentamycin (EXP) methylarsonic acid (ISO) naphthalene (EXP) okadaic acid (ISO) ozone (ISO) paracetamol (EXP,ISO) parathion (ISO) S-nitrosoglutathione (ISO) silver atom (ISO) silver(0) (ISO) sodium arsenate (ISO) sodium arsenite (ISO) terbufos (ISO) titanium dioxide (ISO) trichloroethene (EXP) triclosan (ISO) valproic acid (ISO)
Chad Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 80,009,045 - 80,012,816 (+) NCBI GRCr8 mRatBN7.2 10 79,512,170 - 79,515,941 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 79,511,931 - 79,515,940 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 84,116,871 - 84,120,642 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 83,614,977 - 83,618,748 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 79,129,976 - 79,133,747 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 82,290,296 - 82,296,146 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 82,292,110 - 82,296,651 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 82,109,902 - 82,115,752 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 83,201,982 - 83,205,753 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 10 83,216,351 - 83,220,122 (+) NCBI Celera 10 78,299,492 - 78,303,263 (+) NCBI Celera Cytogenetic Map 10 q26 NCBI
CHAD Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 17 50,464,496 - 50,468,880 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 50,464,496 - 50,468,906 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 17 48,541,857 - 48,546,241 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 17 45,896,852 - 45,901,226 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 17 45,896,859 - 45,901,322 NCBI Celera 17 45,003,146 - 45,007,520 (-) NCBI Celera Cytogenetic Map 17 q21.33 NCBI HuRef 17 43,909,670 - 43,914,045 (-) NCBI HuRef CHM1_1 17 48,605,721 - 48,610,095 (-) NCBI CHM1_1 T2T-CHM13v2.0 17 51,331,492 - 51,338,062 (-) NCBI T2T-CHM13v2.0
Chad Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 94,455,873 - 94,459,953 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 94,455,873 - 94,459,953 (+) Ensembl GRCm39 Ensembl GRCm38 11 94,565,047 - 94,569,127 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 94,565,047 - 94,569,127 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 94,426,388 - 94,430,441 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 11 94,381,165 - 94,385,217 (+) NCBI MGSCv36 mm8 Celera 11 104,186,496 - 104,190,549 (+) NCBI Celera Cytogenetic Map 11 D NCBI cM Map 11 58.9 NCBI
Chad Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955451 11,285,822 - 11,289,644 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955451 11,285,822 - 11,289,644 (+) NCBI ChiLan1.0 ChiLan1.0
CHAD Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 19 66,656,364 - 66,660,817 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 17 71,463,442 - 71,469,553 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 17 44,558,931 - 44,565,450 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 17 49,432,883 - 49,437,279 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 17 49,432,883 - 49,437,337 (-) Ensembl panpan1.1 panPan2
CHAD Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 9 26,397,902 - 26,401,824 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 9 26,398,595 - 26,402,204 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 9 25,790,669 - 25,794,670 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 9 27,192,073 - 27,196,074 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 9 27,192,844 - 27,196,001 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 9 25,959,846 - 25,963,847 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 9 26,218,516 - 26,222,527 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 9 26,348,569 - 26,352,570 (-) NCBI UU_Cfam_GSD_1.0
Chad Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405602 25,830,717 - 25,835,093 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936490 11,240,419 - 11,245,935 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936490 11,240,487 - 11,244,422 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
CHAD Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 12 26,742,494 - 26,746,214 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 12 26,741,737 - 26,746,364 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 12 26,830,719 - 26,836,245 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
CHAD Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 16 42,864,813 - 42,871,272 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 16 42,866,741 - 42,872,023 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666077 13,583,125 - 13,587,574 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Chad
.
Predicted Target Of
Count of predictions: 66 Count of miRNA genes: 57 Interacting mature miRNAs: 61 Transcripts: ENSRNOT00000004435 Prediction methods: Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
1549846 Scl47 Serum cholesterol level QTL 47 3.6 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 10 50574707 95574707 Rat 1298069 Bp168 Blood pressure QTL 168 5.5 blood pressure trait (VT:0000183) systolic blood pressure (CMO:0000004) 10 26521957 98003205 Rat 2293669 Bmd33 Bone mineral density QTL 33 4.5 0.0001 femur strength trait (VT:0010010) femoral neck polar moment of inertia (CMO:0001670) 10 49444551 81709989 Rat 631552 Vetf2 Vascular elastic tissue fragility QTL 2 4.5 0.0002 aorta elastic tissue integrity trait (VT:0010556) artery internal elastic lamina non-tumorous lesion count (CMO:0001913) 10 41142633 86142633 Rat 61449 Ciaa2 CIA Autoantibody QTL 2 7.1 blood autoantibody amount (VT:0003725) calculated serum anti-type 2 collagen antibody titer (CMO:0001279) 10 63221094 107211142 Rat 61325 Aia5 Adjuvant induced arthritis QTL 5 0.01 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 23444813 104060283 Rat 1298078 Stresp5 Stress response QTL 5 2.99 0.00025 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 10 42045676 104670812 Rat 2293679 Bmd30 Bone mineral density QTL 30 3.5 0.0001 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 10 49444551 81709989 Rat 1549831 Bss6 Bone structure and strength QTL 6 4 lumbar vertebra strength trait (VT:0010574) vertebra ultimate force (CMO:0001678) 10 57576521 102576521 Rat 70164 Bw21 Body weight QTL 21 4.36 0.00005 body mass (VT:0001259) body weight (CMO:0000012) 10 53797494 98952626 Rat 61463 Bp12 Blood pressure QTL 12 6.3 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 41333258 86333258 Rat 2298548 Neuinf7 Neuroinflammation QTL 7 3.4 nervous system integrity trait (VT:0010566) spinal cord RT1-B protein level (CMO:0002132) 10 72224939 107211142 Rat 1579919 Bp281 Blood pressure QTL 281 0.01 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 74372084 94965338 Rat 1302404 Cia27 Collagen induced arthritis QTL 27 2.6 0.0045 joint integrity trait (VT:0010548) experimental arthritis severity measurement (CMO:0001459) 10 76452683 107211142 Rat 1300107 Rf18 Renal function QTL 18 3.41 urine output (VT:0003620) timed urine volume (CMO:0000260) 10 78775516 98279596 Rat 8694173 Bw149 Body weight QTL 149 4.38 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 10 44441699 89441699 Rat 2300218 Hpcl2 Hepatic cholesterol level QTL 2 liver cholesterol amount (VT:0010498) liver cholesterol level (CMO:0001597) 10 45029650 95600334 Rat 1554317 Bmd4 Bone mineral density QTL 4 9.4 0.0001 lumbar vertebra mineral mass (VT:0010511) volumetric bone mineral density (CMO:0001553) 10 19816042 99406971 Rat 70171 Cari1 Carrageenan-induced inflammation QTL 1 4.9 0.0005 hypodermis integrity trait (VT:0010550) inflammatory exudate volume (CMO:0001429) 10 53797385 107211142 Rat 10450495 Bp383 Blood pressure QTL 383 0.002 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 76246085 94965338 Rat 61354 Pia10 Pristane induced arthritis QTL 10 0.01 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 23444813 104060283 Rat 2292617 Ept18 Estrogen-induced pituitary tumorigenesis QTL 18 3.9 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) 10 73453136 96120911 Rat 2301967 Cm73 Cardiac mass QTL 73 4.55 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 10 14487011 89062041 Rat 2313103 Bss80 Bone structure and strength QTL 80 2 0.0001 tibia strength trait (VT:1000284) tibia midshaft endosteal cross-sectional area (CMO:0001716) 10 62057807 107057807 Rat 2293646 Bss25 Bone structure and strength QTL 25 10.96 0.0001 femur morphology trait (VT:0000559) femur cross-sectional area (CMO:0001661) 10 69738412 107211142 Rat 2303118 Mamtr7 Mammary tumor resistance QTL 7 0.003 mammary gland integrity trait (VT:0010552) mammary tumor growth rate (CMO:0000344) 10 9658275 104670812 Rat 70188 BpQTLcluster1 Blood pressure QTL cluster 1 4.864 arterial blood pressure trait (VT:2000000) pulse pressure (CMO:0000292) 1 42323132 87323132 Rat 2300172 Bmd57 Bone mineral density QTL 57 9.8 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 10 69738412 107211142 Rat 724516 Uae17 Urinary albumin excretion QTL 17 3.6 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 10 78210622 85220348 Rat 70193 Mcs7 Mammary carcinoma susceptibility QTL 7 2.38 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 10 72224939 107211142 Rat 2313105 Bss79 Bone structure and strength QTL 79 1.8 0.0001 tibia size trait (VT:0100001) tibia midshaft cross-sectional area (CMO:0001717) 10 62057807 107057807 Rat 9589030 Epfw9 Epididymal fat weight QTL 9 19.24 0.001 epididymal fat pad mass (VT:0010421) epididymal fat pad weight to body weight ratio (CMO:0000658) 10 44441699 89441699 Rat 1357344 Bp249 Blood pressure QTL 249 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 66743655 98003205 Rat 2316949 Gluco60 Glucose level QTL 60 3.7 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 10 14487011 107057807 Rat 2293652 Bmd22 Bone mineral density QTL 22 4.9 0.0001 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 10 49444551 81709989 Rat 70198 BpQTLcluster9 Blood pressure QTL cluster 9 2.94 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 42323132 87323132 Rat 2306970 Anxrr22 Anxiety related response QTL 22 5.95 fear/anxiety-related behavior trait (VT:1000241) number of periods of voluntary immobility (CMO:0001045) 10 61345276 98211570 Rat 1359017 Hrtrt21 Heart rate QTL 21 2.4 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 10 51772940 96772940 Rat 2293663 Bss33 Bone structure and strength QTL 33 9.34 0.0001 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 10 69738412 107211142 Rat 7387312 Bw125 Body weight QTL 125 3 0.0047 retroperitoneal fat pad mass (VT:0010430) retroperitoneal fat pad weight (CMO:0000356) 10 64890616 107211142 Rat 2312672 Insul15 Insulin level QTL 15 0.01 blood insulin amount (VT:0001560) serum insulin level (CMO:0000358) 10 57134272 102134272 Rat 2317029 Aia19 Adjuvant induced arthritis QTL 19 2.98 joint integrity trait (VT:0010548) left rear ankle joint diameter (CMO:0002149) 10 66978955 107211142 Rat 724556 Pur2 Proteinuria QTL 2 5.5 urine protein amount (VT:0005160) urine protein level (CMO:0000591) 10 22427500 90627625 Rat 2306793 Ean5 Experimental allergic neuritis QTL 5 4.7 nervous system integrity trait (VT:0010566) IFNG-secreting splenocyte count (CMO:0002122) 10 72552416 93995749 Rat 61387 Bp1 Blood pressure QTL 1 5.1 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 10 51770177 107211142 Rat 2317039 Aia6 Adjuvant induced arthritis QTL 6 4.31 joint integrity trait (VT:0010548) right rear ankle joint diameter (CMO:0002150) 10 66978955 107211142 Rat 70223 Bp57 Blood pressure QTL 57 5 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 1 80676123 Rat 2317043 Aia7 Adjuvant induced arthritis QTL 7 3.82 joint integrity trait (VT:0010548) left rear ankle joint diameter (CMO:0002149) 10 37565079 82565079 Rat 2317042 Aia20 Adjuvant induced arthritis QTL 20 3.38 joint integrity trait (VT:0010548) right rear ankle joint diameter (CMO:0002150) 10 37565079 82565079 Rat 2298481 Eau9 Experimental allergic uveoretinitis QTL 9 0.0169 uvea integrity trait (VT:0010551) experimental autoimmune uveitis score (CMO:0001504) 10 65927233 82565079 Rat 61396 Bp9 Blood pressure QTL 9 4.8 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 68420376 107211142 Rat 1358915 Stresp7 Stress response QTL 7 3.52 blood norepinephrine amount (VT:0005663) plasma norepinephrine level (CMO:0001010) 10 78899655 87307728 Rat 70363 Bp71 Blood pressure QTL 71 0.04 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 61345276 81714865 Rat 61402 Niddm3 Non-insulin dependent diabetes mellitus QTL 3 4.58 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 10 61345413 82564856 Rat 1331791 Cm31 Cardiac mass QTL 31 3.84606 heart mass (VT:0007028) heart wet weight (CMO:0000069) 10 29299504 107211142 Rat 70364 Bp72 Blood pressure QTL 72 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 51121100 96121100 Rat 10450498 Bp384 Blood pressure QTL 384 0.002 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 67750049 107211142 Rat 4889492 Pancm2 Pancreatic morphology QTL 2 3.2 pancreatic beta cell morphology trait (VT:0005217) ratio of insulin-positive cell area to total area of splenic region of pancreas (CMO:0001814) 10 76748906 107211142 Rat 6893366 Bw106 Body weight QTL 106 0.3 0.47 body mass (VT:0001259) body weight (CMO:0000012) 10 70199100 107211142 Rat 2293698 Bss43 Bone structure and strength QTL 43 5.33 0.0001 lumbar vertebra size trait (VT:0010518) lumbar vertebra cross-sectional area (CMO:0001689) 10 59209888 104209888 Rat 631530 Tls3 T-lymphoma susceptibility QTL 3 0 0.0001 thymus integrity trait (VT:0010555) percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911) 10 51774612 95600334 Rat 1354608 Cm33 Cardiac mass QTL 33 2.8 heart left ventricle mass (VT:0007031) heart left ventricle wet weight (CMO:0000071) 10 54809292 99809292 Rat 1558643 Cm44 Cardiac mass QTL 44 4.8 0.0000368 heart mass (VT:0007028) heart wet weight (CMO:0000069) 10 61345276 99703528 Rat 631535 Cm51 Cardiac mass QTL 51 3 heart mass (VT:0007028) calculated heart weight (CMO:0000073) 10 51786282 91669536 Rat 631267 Cia20 Collagen induced arthritis QTL 20 3.2 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 23444813 104060283 Rat 2293705 Bmd25 Bone mineral density QTL 25 7.1 0.0001 femur mineral mass (VT:0010011) compact volumetric bone mineral density (CMO:0001730) 10 49444551 81709989 Rat 1576308 Schws1 Schwannoma susceptibility QTL 1 0.0041 nervous system integrity trait (VT:0010566) percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017) 10 40035094 102359817 Rat 631269 Cia22 Collagen induced arthritis QTL 22 8.9 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 40035094 104060283 Rat 631268 Cia21 Collagen induced arthritis QTL 21 3.1 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 14487011 104060283 Rat 7207811 Bmd90 Bone mineral density QTL 90 5.2 femur size trait (VT:1000369) femoral neck cross-sectional area (CMO:0001697) 10 49444551 81709989 Rat 631270 Cia23 Collagen induced arthritis QTL 23 3.9 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 40035094 104060283 Rat 7411614 Foco18 Food consumption QTL 18 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 10 44441699 89441699 Rat 2325836 Bp346 Blood pressure QTL 346 0.001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 76246085 84007272 Rat 6893336 Cm75 Cardiac mass QTL 75 0.1 0.87 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 10 61345276 99703528 Rat 12880053 Cm104 Cardiac mass QTL 104 0.009 heart right ventricle mass (VT:0007033) heart right ventricle weight to body weight ratio (CMO:0000914) 10 73452992 83463334 Rat 631547 Bp87 Blood pressure QTL 87 4.5 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 47369470 92369470 Rat 61427 Cia16 Collagen induced arthritis QTL 16 3.2 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 6357896 96121100 Rat 2292438 Bp311 Blood pressure QTL 311 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 76246085 107211142 Rat 2312662 Slep8 Serum leptin concentration QTL 8 0.05 blood leptin amount (VT:0005667) serum leptin level (CMO:0000780) 10 57134272 102134272 Rat 12880050 Am10 Aortic mass QTL 10 0.016 aorta mass (VT:0002845) aorta weight to aorta length to body weight ratio (CMO:0002722) 10 74372084 84007272 Rat 6893342 Cm78 Cardiac mass QTL 78 0.1 0.88 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 10 42876766 79813922 Rat 1358188 Ept9 Estrogen-induced pituitary tumorigenesis QTL 9 3.9 pituitary gland mass (VT:0010496) pituitary gland wet weight (CMO:0000853) 10 73453136 96120911 Rat 631537 Oia4 Oil induced arthritis QTL 4 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 75631887 87055282 Rat 1642980 Bp300 Blood pressure QTL 300 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 68383129 107211142 Rat 631542 Bp82 Blood pressure QTL 82 6.8 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 26521957 98952741 Rat 2312668 Scl65 Serum cholesterol level QTL 65 0.001 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 10 57134272 102134272 Rat
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
83
68
67
36
25
36
6
189
97
63
39
54
31
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Ensembl Acc Id:
ENSRNOT00000004435 ⟹ ENSRNOP00000004435
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 10 79,511,931 - 79,515,940 (+) Ensembl Rnor_6.0 Ensembl 10 82,292,110 - 82,296,651 (+) Ensembl
RefSeq Acc Id:
NM_019164 ⟹ NP_062037
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 10 80,009,045 - 80,012,816 (+) NCBI mRatBN7.2 10 79,512,170 - 79,515,941 (+) NCBI Rnor_6.0 10 82,292,375 - 82,296,146 (+) NCBI Rnor_5.0 10 82,109,902 - 82,115,752 (+) NCBI RGSC_v3.4 10 83,201,982 - 83,205,753 (+) RGD Celera 10 78,299,492 - 78,303,263 (+) RGD
Sequence:
CGGACTTGTCGCTGCCTTAGCCCCCCAGCCCCGGCTCAAGGCGTCCTGATCATGGCCCGAGTACTCTTACTCAGTCTGGTCTTCCTTGCTATCCTCCTGCCTGCGCTGGCCGCCTGCCCCCAAAACTG
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RefSeq Acc Id:
NP_062037 ⟸ NM_019164
- Peptide Label:
precursor
- UniProtKB:
O70210 (UniProtKB/Swiss-Prot), A6HI58 (UniProtKB/TrEMBL), A0A0H2UHB8 (UniProtKB/TrEMBL)
- Sequence:
MARVLLLSLVFLAILLPALAACPQNCHCHGDLQHVICDKVGLQKIPKVSETTKLLNLQRNNFPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLY
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Ensembl Acc Id:
ENSRNOP00000004435 ⟸ ENSRNOT00000004435
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2002-06-10
Chad
chondroadherin
Symbol and Name status set to approved
70586 APPROVED
Note Type
Note
Reference
gene_expression
expressed in cartilage, particularly in the growth plate and the maturing femoral head
69806
