Bp311 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp311 (Blood pressure QTL 311) Rattus norvegicus

Symbol: Bp311
Name: Blood pressure QTL 311
RGD ID: 2292438
Previously known as: C10QTL3
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: mean arterial blood pressure   (CMO:0000009)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81076,743,133 - 95,604,677RGD_MAPPER_PIPELINE
mRatBN7.21076,246,085 - 107,211,142RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01078,970,279 - 112,626,471RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01078,816,241 - 112,200,500RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41079,857,808 - 99,588,446RGDRGSC3.4
Cross Type: intercross
Strains Crossed: SS.LEW-(D10Chm155-D10Rat127)/Ayd 
JBrowse: View Region in Genome Browser (JBrowse)
Model




  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp311RatHypotension  IAGP 2292238 RGD 

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp311Ratdecreased systemic arterial systolic blood pressure  IDA 2292238 RGD 

Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp311Ratmean arterial blood pressure  IDA 2292238 RGD 

Experimental Condition
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp311Ratcontrolled sodium content diet  IDA 2292238 RGD 

Measurement Method
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp311Ratintra-aortic abdominal radiotelemetry  IDA 2292238 RGD 

Rat Strain
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp311RatSS.LEW-(D10Chm155-D10Rat127)/Ayd  IEA 2292238 RGD 

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp311Ratarterial blood pressure trait  IDA 2292238 RGD 


#
Reference Title
Reference Citation
1. Submegabase resolution of epistatically interacting quantitative trait loci for blood pressure applicable for essential hypertension. Chauvet C, etal., J Hypertens. 2008 May;26(5):893-901.

Related QTL Description Reference
Bp281 sub_region RGD:2292238



1 to 20 of 881 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
2322976Rps24l7ribosomal protein S24 like 7107628936576289879Rat
1359248Kif2bkinesin family member 2B107639416076396379Rat
41295422LOC120095175uncharacterized LOC120095175107715506277216511Rat
1594586Gapdh-ps107Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 107107724356177246188Rat
41003664Ldha-ps29lactate dehydrogenase A, pseudogene 29107756372577564800Rat
41123949LOC120095176uncharacterized LOC120095176107776432977775450Rat
40981583LOC120095439small nucleolar RNA SNORA48107787377177873910Rat
2322930Car10carbonic anhydrase 10107805587578556490Rat
11413531LOC108352121uncharacterized LOC108352121107817849178189087Rat
6493616LOC100911361heterogeneous nuclear ribonucleoprotein A3-like107821773378219237Rat
11395747LOC108352122uncharacterized LOC108352122107844915678475943Rat
9384463LOC103693449ATP synthase-coupling factor 6, mitochondrial pseudogene107862542278625920Rat
9417566Tmsb10l2thymosin, beta 10 like 2107871166678711911Rat
40957969LOC120095281uncharacterized LOC120095281107878300378789419Rat
1309957Utp18UTP18 small subunit processome component107881187978839338Rat
1592427Mbtd1mbt domain containing 1107883914078895413Rat
619877Nme2NME/NM23 nucleoside diphosphate kinase 2107889809778903514Rat
70497Nme1NME/NM23 nucleoside diphosphate kinase 1107890703678929659Rat
41393922Ebln1endogenous Bornavirus like nucleoprotein 1107893864578940651Rat
1311289Spag9sperm associated antigen 9107894343979077797Rat

1 to 20 of 881 rows
1 to 20 of 1163 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match
10062D10Wox19230108541268585412915Ratregion
10627D10Mcw116610105813290105813458Ratregion
10662D10Wox23258108097644580976703Ratregion
10926D10Wox21130108913584589135975Ratregion
10980D10Wox16125108051612580516250Ratregion
10981D10Arb21199108051614780516346Ratregion
10982D10Mit13165108051613480516299Ratregion
11137D10Wox17153108705512187055282Ratregion
11169D10Mgh21140108853913988539279Ratregion
34100D10Mgh3153109560033495600487Ratregion
34202D10Mgh1613410102359683102359817Ratregion
34274D10Mgh5223108256485682565079Ratregion
34485D10Mgh4104109236936492369470Ratregion
34695D10Mgh15103108340002583400128Ratregion
34718D10Mgh23231107889965578899805Ratregion
34718D10Mgh23231107889965578899894Ratregion
11308D10Wox20111108730761787307728Ratregion
33676D13Mit11137108609084786090990Ratregion
36019D10Rat18156108709561687095772Ratregion
36073D10Rat22185108065573780655922Ratregion
1 to 20 of 1163 rows

Flank 1: (D10Got112)
Rat AssemblyChrPosition (strand)Source
GRCr81076,743,133 - 76,743,260 (+)Marker Load Pipeline
mRatBN7.21076,246,085 - 76,246,212 (+)MAPPER
Rnor_6.01078,970,279 - 78,970,405NCBI
Rnor_5.01078,816,241 - 78,816,367UniSTS
RGSC_v3.41079,857,808 - 79,857,935RGD
RGSC_v3.41079,857,809 - 79,857,935UniSTS
RGSC_v3.11079,872,179 - 79,872,305RGD
Celera1075,125,614 - 75,125,740UniSTS
RH 3.4 Map10708.2RGD
RH 3.4 Map10708.2UniSTS
RH 2.0 Map10825.4RGD
Flank 2: (D10Rat9)
Rat AssemblyChrPosition (strand)Source
GRCr81095,604,537 - 95,604,677 (+)Marker Load Pipeline
RGSC_v3.41099,588,306 - 99,588,446RGD
RGSC_v3.41099,588,307 - 99,588,446UniSTS
RGSC_v3.11099,602,676 - 99,602,816RGD
Celera1093,755,287 - 93,755,428UniSTS
RH 3.4 Map101071.59UniSTS
RH 3.4 Map101071.59RGD
RH 2.0 Map101181.2RGD
SHRSP x BN Map1077.15RGD
Cytogenetic Map10q32.1UniSTS


1 to 10 of 125 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1549846Scl47Serum cholesterol level QTL 473.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)105057470795574707Rat
1578779Tcas10Tongue tumor susceptibility QTL 103.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)103129743976297439Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)104114263386142633Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063221094107211142Rat
631555Bp134Blood pressure QTL 1340.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)108051528791230079Rat
631558Bp137Blood pressure QTL 1370.013arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)109472486096836268Rat
1549831Bss6Bone structure and strength QTL 64lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)1057576521102576521Rat
70164Bw21Body weight QTL 214.360.00005body mass (VT:0001259)body weight (CMO:0000012)105379749498952626Rat
4889948Bss91Bone structure and strength QTL 914tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)108256485692369470Rat
61463Bp12Blood pressure QTL 126.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104133325886333258Rat

1 to 10 of 125 rows


Note Type Note Reference
qtl_cross_type intercross  
qtl_general software package used: ANOVA 2292238
qtl_general number of animals used: 8 rats 2292238
qtl_general measurement method:male rats were weaned at 21 days, maintained on 0.2% NaCl diet; on day 35 they were fed a high-salt diet (2% NaCl); at day 56, telemetry probes were implanted 2292238