Ean4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Ean4 (Experimental allergic neuritis QTL 4) Rattus norvegicus

Symbol: Ean4
Name: Experimental allergic neuritis QTL 4
RGD ID: 2306792
Trait: nervous system integrity trait   (VT:0010566)    
Measurement Type: IFNG-secreting splenocyte count   (CMO:0002122)    
LOD Score: 4.0
P Value: Not Available
Variance: Not Available
Inheritance Type: co-recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21084,022,321 - 93,995,963RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01086,977,861 - 97,308,569RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01086,774,898 - 97,028,928RGDRnor5.0
RGSC_v3.41087,849,516 - 98,392,508RGDRGSC3.4
Cross Type: intercross
Strains Crossed: Kini:DA,PVG-G12 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Advanced intercross line mapping suggests that ncf1 (ean6) regulates severity in an animal model of guillain-barre syndrome. Huberle A, etal., J Immunol. 2009 Apr 1;182(7):4432-8.
Related QTLs

Related QTL Description Reference
Oia4 maps to same region RGD:2306769


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1310402Tns4tensin 4108402196584041346Rat
41004921Trnas-aga39transfer RNA serine (anticodon AGA) 39108404409984044179Rat
735151Ccr7C-C motif chemokine receptor 7108409819384108309Rat
41400389LOC120095183uncharacterized LOC120095183108411931684134747Rat
1304726Smarce1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1108415927084180547Rat
1560383Krt222keratin 222108418413784196122Rat
1303157Krt24keratin 24108423216384237299Rat
1359097Krt25keratin 25108426739984275025Rat
1303322Krt26keratin 26108428096584295575Rat
1359115Krt27keratin 27108429868484303967Rat
1309530Krt28keratin 28108431835284328693Rat
11384018LOC108352132uncharacterized LOC108352132108432509184333478Rat
1359092Krt10keratin 10108433869584343279Rat
1304805Krt12keratin 12108437080384378103Rat
628646Krt20keratin 20108438479084394125Rat
1308838Krt23keratin 23108443444584450773Rat
11507590LOC108352133uncharacterized LOC108352133108445089884472770Rat
1303032Krt39keratin 39108447394684480552Rat
1359145Krt40keratin 40108449647084502756Rat
1307504Krtap3-3keratin associated protein 3-3108451145984511758Rat
1596844Adk-ps1adenosine kinase, pseudogene 1108451316184514263Rat
1596828Krtap3-2keratin associated protein 3-2108451863484518964Rat
41118377LOC120095334keratin-associated protein 3-1-like108452121684521515Rat
1596817Krtap3-1keratin associated protein 3-1108452769884527994Rat
1598224Krtap1-5keratin associated protein 1-5108454328884543711Rat
2324575Krtap1-1keratin associated protein 1-1108454576584546331Rat
1595518Krtap1-3keratin associated protein 1-3108455287384553394Rat
2318794Krtap1-5l1keratin associated protein 1-5 like 1108455952184559916Rat
1595488Krtap2-4l1keratin associated protein 2-4-like 1108456395084564373Rat
1561281Krtap2-1keratin associated protein 2-1108457216484572587Rat
1562309Krtap2-4keratin associated protein 2-4108457795384578426Rat
1561684Krtap2-4l2keratin associated protein 2-4 like 2108458436484585548Rat
1595464Krtap4-7l2keratin associated protein 4-7 like 2108459217884592759Rat
2319111Krtap4-7keratin associated protein 4-7108459908884599579Rat
7572891Krtap4-7l1keratin associated protein 4-7 like 1108460675484607290Rat
6486207Krtap4-3l1keratin associated protein 4-3 like 1108461250684620724Rat
2318949Krtap4-6keratin associated protein 4-6108462778284628519Rat
1590902Cct6a-ps2chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 2108470494584706933Rat
11372181Krtap4-8keratin associated protein 4-8108473228584732884Rat
6486396Krtap4-9keratin associated protein 4-9108473988184740603Rat
6503260LOC100909494keratin-associated protein 4-7-like108474549984746100Rat
1566146Krtap4-3keratin associated protein 4-3108475217384790523Rat
1593000Krtap9-1keratin associated protein 9-1108479664384797404Rat
1587320Gle1-ps5GLE1 RNA export mediator, pseudogene 5108480289984804597Rat
11470817Krtap9-1-ps1keratin associated protein 9-1, pseudogene 1108480469884806982Rat
1592933Krtap9-7keratin associated protein 9-7108481375484814326Rat
6496829LOC100910814keratin-associated protein 9-1-like108481965284820206Rat
7724887Rab11a-ps1RAB11a, member RAS oncogene family, pseudogene 1108482351584829125Rat
1591772LOC680428hypothetical protein LOC680428108483952184840381Rat
1591758Krtap31-2keratin associated protein 31-2108484992084850903Rat
1591746Krtap31-1keratin associated protein 31-1108486305084863982Rat
2320203Krtap9-5lkeratin associated protein 9-5 like108487709884880040Rat
7702025Krtap29-1keratin associated like protein 29-1108490898384910002Rat
2318578Krtap16-1keratin associated protein 16-1108491511684916984Rat
7611738Krtap17-1keratin associated protein 17-1108492392084924634Rat
1583720Eno1-ps3enolase 1, pseudogene 3108493248884933110Rat
1306249Krt33akeratin 33A108494258484947544Rat
1359595Krt33bkeratin 33B108495583884961673Rat
1306530Krt34keratin 34108496998884974098Rat
1359411Krt31keratin 31108497939384982898Rat
1359701Krt32keratin 32108501355185020578Rat
1305300Krt35keratin 35108502617185029568Rat
1305792Krt36keratin 36108503637985040003Rat
1302937Krt13keratin 13108505188785056099Rat
1303044Krt15keratin 15108506679785070614Rat
619936Krt19keratin 19108507583585080552Rat
7517671LOC102554449uncharacterized LOC102554449108508026085086577Rat
628785Krt9keratin 9108512096285127228Rat
1307463Krt14keratin 14108513778685142054Rat
1359526Ka11type I keratin KA11108516142485164737Rat
1590901Krt16keratin 16108516835785171816Rat
1303181Krt17keratin 17108517867385183392Rat
1359182Krt42keratin 42108518518685246520Rat
1306308Eif1eukaryotic translation initiation factor 1108524675185248842Rat
2662Gastgastrin108526483285269393Rat
68327Hap1huntingtin-associated protein 1108527789085286126Rat
620412Jupjunction plakoglobin108530043885327378Rat
41063599LOC120095292uncharacterized LOC120095292108530824485320119Rat
620767P3h4prolyl 3-hydroxylase family member 4108533815885345108Rat
1549751Fkbp10FKBP prolyl isomerase 10108534543485357998Rat
1359229Nt5c3b5'-nucleotidase, cytosolic IIIB108535848385376340Rat
1303290Klhl10kelch-like family member 10108537644285392720Rat
1306673Klhl11kelch-like family member 11108539848785409049Rat
2018AclyATP citrate lyase108541204585464253Rat
41160718Trnas-aga28transfer RNA serine (anticodon AGA) 28108547313785473211Rat
1311859Odad4outer dynein arm docking complex subunit 4108548008985508603Rat
2368Cnp2',3'-cyclic nucleotide 3' phosphodiesterase108551116485517723Rat
1303226Dnajc7DnaJ heat shock protein family (Hsp40) member C7108551863785555079Rat
1307363Nkiras2NFKB inhibitor interacting Ras-like 2108555470485562072Rat
1563442Zfp385czinc finger protein 385C108556200385618100Rat
41241036LOC120095415small nucleolar RNA SNORA44108556625885566369Rat
21076281C10h17orf113-ps1similar to human chromosome 17 open reading frame 113, pseudogene 1108557383985576654Rat
41077213LOC120095293uncharacterized LOC120095293108557555485580104Rat
1310093Dhx58DEXH-box helicase 58108562035285631776Rat
1307242Kat2alysine acetyltransferase 2A108563221685640561Rat
1309122Hspb9heat shock protein family B (small) member 9108564128485641929Rat
1307095Rab5cRAB5C, member RAS oncogene family108564255385666142Rat
621415Kcnh4potassium voltage-gated channel subfamily H member 4108566833285688166Rat
11462129LOC108352136uncharacterized LOC108352136108568722485689434Rat
2786Hcrthypocretin neuropeptide precursor108568997985691214Rat
1308881GhdcGH3 domain containing108569361285697833Rat
3774Stat5bsignal transducer and activator of transcription 5B108570484185775856Rat
3773Stat5asignal transducer and activator of transcription 5A108578553785809869Rat
3772Stat3signal transducer and activator of transcription 3108581120685863057Rat
41019588LOC120095484U2 spliceosomal RNA108587276985872905Rat
1307685Cavin1caveolae associated protein 1108588410085896136Rat
41107818LOC120095498U6 spliceosomal RNA108591800185918107Rat
68405Atp6v0a1ATPase H+ transporting V0 subunit a1108593580285989901Rat
1564228NagluN-acetyl-alpha-glucosaminidase108600154586009049Rat
2836Hsd17b1hydroxysteroid (17-beta) dehydrogenase 1108600972886011928Rat
1549767CoasyCoenzyme A synthase108601456686018849Rat
1308590MlxMAX dimerization protein MLX108601921686024326Rat
621885Psmc3ipPSMC3 interacting protein108602428186027928Rat
1561189Retreg3reticulophagy regulator family member 3108602876786052575Rat
628606Tubg1tubulin, gamma 1108605284586059436Rat
1585798Tubg2tubulin, gamma 2108609120586108053Rat
1304854Plekhh3pleckstrin homology, MyTH4 and FERM domain containing H3108609846186106931Rat
1310716Ccr10C-C motif chemokine receptor 10108610855186110988Rat
70902Cntnap1contactin associated protein 1108610985086125612Rat
1305028Ezh1enhancer of zeste 1 polycomb repressive complex 2 subunit108612602386162001Rat
41376271LOC120095184uncharacterized LOC120095184108616721586169964Rat
61872Ramp2receptor activity modifying protein 2108618736686190692Rat
1584685Vps25vacuolar protein sorting 25 homolog108619606286201606Rat
631401Wnk4WNK lysine deficient protein kinase 4108620255286219655Rat
9203006Atp5mk-ps2ATP synthase membrane subunit K, pseudogene 2108620859086208921Rat
1564337Coa3cytochrome C oxidase assembly factor 3108622019286221173Rat
1564542Cntd1cyclin N-terminal domain containing 1108622143086231812Rat
620190Becn1beclin 1108623138786246742Rat
1306996Psme3proteasome activator subunit 3108625767286265458Rat
727941Aoc2-ps1amine oxidase, copper containing 2, pseudogene 1108626700786268473Rat
62058Aoc3amine oxidase, copper containing 3108627275786280702Rat
40950062LOC120095407U1 spliceosomal RNA108629847386298636Rat
2644G6pc1glucose-6-phosphatase catalytic subunit 1108630740086318766Rat
1561650Aarsd1alanyl-tRNA synthetase domain containing 1108634062586353732Rat
9413039Ptges3lprostaglandin E synthase 3 like108635401986361318Rat
1307490Rundc1RUN domain containing 1108636163586375446Rat
621192Rpl27ribosomal protein L27108637551186379210Rat
1304553Ifi35interferon-induced protein 35108638102386389279Rat
1308943Vat1vesicle amine transport 1108638954986397167Rat
1306172Rnd2Rho family GTPase 2108639915186402750Rat
2218Brca1BRCA1, DNA repair associated108641744186477762Rat
69195Nbr1NBR1, autophagy cargo receptor108647777586506418Rat
1309043Tmem106atransmembrane protein 106A108650690886515915Rat
7612562Ccdc200coiled-coil domain containing 200108651770486523106Rat
1596776Bax-ps2BCL2-associated X protein, pseudogene 2108652465886533056Rat
41356502LOC120095476U2 spliceosomal RNA108653422586534415Rat
11429765LOC108352174leucine-rich repeat-containing protein 37A3-like108654249386545769Rat
41089112LOC120095477U2 spliceosomal RNA108656210386562293Rat
1310432Rdm1RAD52 motif containing 1108656287186573034Rat
41023768LOC120095478U2 spliceosomal RNA108658078086580970Rat
40930232LOC120095479U2 spliceosomal RNA108658452586584715Rat
1306875Arl4dADP-ribosylation factor like GTPase 4D108659205486602843Rat
40934802LOC120095480U2 spliceosomal RNA108659278386592973Rat
1561590Sap18-ps1Sin3A associated protein 18, pseudogene 1108665735086657976Rat
1310723Dhx8DEAH-box helicase 8108666764186704198Rat
7610492Polr2l-ps3RNA polymerase II, I and III subunit L, pseudogene 3108669637186697618Rat
1306524Etv4ETS variant transcription factor 4108670674986721974Rat
1596730Ndufv3-ps2NADH:ubiquinone oxidoreductase subunit V3, pseudogene 2108674437886751105Rat
7527654LOC102546527uncharacterized LOC102546527108678355786788279Rat
7664110LOC102546446uncharacterized LOC102546446108679466486801737Rat
1308911Meox1mesenchyme homeobox 1108681845086837563Rat
69358Sostsclerostin108691251786915561Rat
1560049Dusp3dual specificity phosphatase 3108692001486933739Rat
1565533Cfap97d1CFAP97 domain containing 1108693358586944566Rat
620015Mpp3MAGUK p55 scaffold protein 3108694570586975261Rat
1584376Cd300lgCd300 molecule-like family member G108699188687009248Rat
620014Mpp2MAGUK p55 scaffold protein 2108701143487043883Rat
3385Ppypancreatic polypeptide108705474787056044Rat
1593289Pyypeptide YY108706115587062278Rat
41281133LOC120095294uncharacterized LOC120095294108708067987083716Rat
1565783NagsN-acetylglutamate synthase108709833087102465Rat
1306490Tmem101transmembrane protein 101108710511587108868Rat
1309441Lsm12LSM12 homolog108711833487140395Rat
727875G6pc3glucose 6 phosphatase catalytic subunit 3108714698787151223Rat
619980Hdac5histone deacetylase 5108715297887187921Rat
1305385Hrobhomologous recombination factor with OB-fold108720601787222483Rat
1563878Asb16ankyrin repeat and SOCS box-containing 16108722597687233078Rat
1304758Tmub2transmembrane and ubiquitin-like domain containing 2108723854387242968Rat
1311493Atxn7l3ataxin 7-like 3108724284387250186Rat
3927Ubtfupstream binding transcription factor108725821787274291Rat
3710Slc4a1solute carrier family 4 member 1 (Diego blood group)108730686587323132Rat
1590900Pno1-ps1partner of NOB1 homolog (S. cerevisiae), pseudogene 1108734603987347309Rat
735057Rundc3aRUN domain containing 3A108735262487361767Rat
1306193Slc25a39solute carrier family 25, member 39108736249487367358Rat
61983Grngranulin precursor108738767287393777Rat
1307966Fam171a2family with sequence similarity 171, member A2108739388887404051Rat
1596428Itga2bintegrin subunit alpha 2b108740853287426055Rat
1596463Gpatch8G patch domain containing 8108743202087512594Rat
11482925LOC10835213960S ribosomal protein L36 pseudogene108752776687528169Rat
7648353LOC102550111uncharacterized LOC102550111108753824387552344Rat
71012Fzd2frizzled class receptor 2108756186687563776Rat
1591208Atp6v0c-ps1ATPase H+ transporting V0 subunit C, pseudogene 1108757454487584265Rat
1563746Meiocmeiosis specific with coiled-coil domain108762880787646485Rat
1311929Ccdc43coiled-coil domain containing 43108765055487662788Rat
9450974LOC103693436uncharacterized LOC103693436108769411187694518Rat
41276998LOC120095185uncharacterized LOC120095185108770161987724858Rat
7649594Dbf4bDBF4B-CDC7 kinase regulatory subunit108771380587719197Rat
1307515Adam11ADAM metallopeptidase domain 11108772411587742773Rat
628889Gjc1gap junction protein, gamma 1108775819287785443Rat
1306907Higd1bHIG1 hypoxia inducible domain family, member 1B108779886487804459Rat
1560116Eftud2elongation factor Tu GTP binding domain containing 2108780489387852181Rat
1562370Ccdc103coiled-coil domain containing 103108784632787849959Rat
1307851FAM187Afamily with sequence similarity 187, member A108785086187852332Rat
2679Gfapglial fibrillary acidic protein108785289187861631Rat
1310360Kif18bkinesin family member 18B108787042487889895Rat
9420753Rpl22l4ribosomal protein L22 like 4108789394887894538Rat
1306039C1ql1complement C1q like 1108790212587909556Rat
1359211Dcakddephospho-CoA kinase domain containing108795773887989002Rat
628642Nmt1N-myristoyltransferase 1108798882688025405Rat
1310903Plcd3phospholipase C, delta 3108802670788048080Rat
1308404Acbd4acyl-CoA binding domain containing 4108804805888062612Rat
1559851Hexim1HEXIM P-TEFb complex subunit 1108806280888064920Rat
1311635Hexim2HEXIM P-TEFb complex subunit 2108807787088084776Rat
1311042Fmnl1formin-like 1108811587688143342Rat
2319718Efcab15EF-hand calcium binding domain 15108814338288153693Rat
1359156Spata32spermatogenesis associated 32108815324088164389Rat
41262638LOC120095296uncharacterized LOC120095296108815384988184195Rat
1310487Map3k14mitogen-activated protein kinase kinase kinase 14108816534988215558Rat
41159998LOC120095297uncharacterized LOC120095297108821375888225854Rat
735202Arhgap27Rho GTPase activating protein 27108828047088313225Rat
1308010Plekhm1pleckstrin homology and RUN domain containing M1108831383788366182Rat
1559753Lrrc37aleucine rich repeat containing 37A108839583788433519Rat
735046Prp2l1proline rich protein 2-like 1108846226288540642Rat
9180709LOC103693460uncharacterized LOC103693460108854067888551970Rat
1306968Lyzl6lysozyme-like 6108854434288549177Rat
1589060Rprmlreprimo-like108856024888561252Rat
62079Gosr2golgi SNAP receptor complex member 2108858529188605642Rat
1564452Magmas-ps1mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction, pseudogene 1108860237988602899Rat
41172258LOC120095298uncharacterized LOC120095298108860571288613782Rat
1309574Wnt9bWnt family member 9B108863533088657035Rat
3972Wnt3Wnt family member 3108868019888724170Rat
621594NsfN-ethylmaleimide sensitive factor, vesicle fusing ATPase108872791288857375Rat
621271Arf2ADP-ribosylation factor 2108886783688889654Rat
61276Crhr1corticotropin releasing hormone receptor 1108904018689083481Rat
1560562Sppl2csignal peptide peptidase like 2C108909527989097487Rat
69329Maptmicrotubule-associated protein tau108913864489236137Rat
6486111LOC100912629uncharacterized LOC100912629108914812389152191Rat
1311429Kansl1KAT8 regulatory NSL complex subunit 1108923766789368735Rat
41075489LOC120095423small nucleolar RNA SNORA21108926699089267117Rat
1304921Cdc27cell division cycle 27108940072089449816Rat
1591197Myl4myosin, light chain 4108944945689485365Rat
1591196Gstp1-ps2glutathione S-transferase pi 1, pseudogene 2108949816989499906Rat
628868Itgb3integrin subunit beta 3108950991789564679Rat
1305423Efcab3EF-hand calcium binding domain 3108958352690077260Rat
11381204LOC108352141uncharacterized LOC108352141108988662589887932Rat
41249496LOC120095378U6 spliceosomal RNA109003343690033542Rat
1310240Mettl2methyltransferase like 2109009552790109354Rat
1590899Cactin-ps2cactin, spliceosome C complex subunit, pseudogene 2109014221190155347Rat
1310907Tlk2tousled-like kinase 2109015444990248562Rat
41034882LOC120095467U6atac minor spliceosomal RNA109022333990223431Rat
41101625Cycs-ps6cytochrome c, somatic, pseudogene 6109022735690227705Rat
1559436Mrc2mannose receptor, C type 2109026198690323187Rat
41318785LOC120095186uncharacterized LOC120095186109026236690267267Rat
41334181LOC120095187uncharacterized LOC120095187109028417790289455Rat
1311692Marchf10membrane associated ring-CH-type finger 10109033278390423109Rat
40927017LOC120095189uncharacterized LOC120095189109034159690366478Rat
11389364LOC108352144uncharacterized LOC108352144109042062290461890Rat
40973775Trnav-aac25transfer RNA valine (anticodon AAC) 25109054823190548311Rat
1309285Tanc2tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2109055312490873477Rat
41337284LOC120095493U4 spliceosomal RNA109056480690564957Rat
41292971LOC120095191uncharacterized LOC120095191109065984090687446Rat
41135105LOC120095351U6 spliceosomal RNA109074981890749924Rat
9215295Snupn-ps1snurportin 1, pseudogene 1109081068190821759Rat
1310987Cyb561cytochrome b-561109087805290888734Rat
2493Aceangiotensin I converting enzyme109091031690930437Rat
41378188LOC120095193uncharacterized LOC120095193109091905390920018Rat
1561299Ace3angiotensin I converting enzyme (peptidyl-dipeptidase A) 3109093335990949035Rat
620304Kcnh6potassium voltage-gated channel subfamily H member 6109094924090970746Rat
1305140Dcaf7DDB1 and CUL4 associated factor 7109097409590996275Rat
1306784Taco1translational activator of cytochrome c oxidase I109100259091010494Rat
1304575Map3k3mitogen activated protein kinase kinase kinase 3109102017491088852Rat
1309967Limd2LIM domain containing 2109109027991092772Rat
727905StradaSTE20 related adaptor alpha109109484991123890Rat
1308813Ccdc47coiled-coil domain containing 47109113030391148829Rat
1304909Ddx42DEAD-box helicase 42109114892691180940Rat
1307110Ftsj3FtsJ RNA 2'-O-methyltransferase 3109118094591187389Rat
708376Psmc5proteasome 26S subunit, ATPase 5109118776391193697Rat
41071609LOC120095430small nucleolar RNA SNORA51109119022791190352Rat
69289Smarcd2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2109119375291202817Rat
69435Tcam1testicular cell adhesion molecule 1109120847091220484Rat
2686Gh1growth hormone 1109122810291230079Rat
620012Cd79bCD79b molecule109123935491242500Rat
3636Scn4asodium voltage-gated channel alpha subunit 4109124693691296670Rat
11498743LOC108352146uncharacterized LOC108352146109126843491276253Rat
1307288Prr29proline rich 29109130582091320661Rat
1359660Icam2intercellular adhesion molecule 2109130860891319536Rat
1559716Ern1endoplasmic reticulum to nucleus signaling 1109132688991421201Rat
41285482Rps10-ps6ribosomal protein S10, pseudogene 6109140280291403291Rat
7650056LOC102546698uncharacterized LOC102546698109143517591435535Rat
41075578Snord104small nucleolar RNA, C/D box 104109143531391435382Rat
41231368Snora50csmall nucleolar RNA, H/ACA box 50C109143557091435702Rat
1305112Tex2testis expressed 2109143662991546240Rat
41384166Trnap-agg83transfer RNA proline (anticodon AGG) 83109145255691452636Rat
61927Pecam1platelet and endothelial cell adhesion molecule 1109159052191652279Rat
620488Milr1mast cell immunoglobulin-like receptor 1109168428891705284Rat
1305128Polg2DNA polymerase gamma 2, accessory subunit109171258691723008Rat
619906Ddx5DEAD-box helicase 5109172350891732210Rat
9685093Mir3064microRNA 3064109172580091725866Rat
1309655Cep95centrosomal protein 95109173211191760095Rat
1310067Smurf2SMAD specific E3 ubiquitin protein ligase 2109176179891862485Rat
41360186Trnaa-agc91transfer RNA alanine (anticodon AGC) 91109178763191787711Rat
41351506LOC120095301survival of motor neuron-related-splicing factor 30-like109187048191872151Rat
11437264LOC108352149uncharacterized LOC108352149109190004691902191Rat
621419Kpna2karyopherin subunit alpha 2109193395191946115Rat
11508819Trnar-ccg2transfer RNA arginine (anticodon CCG) 2109195840491958476Rat
1565033C10h17orf58similar to human chromosome 17 open reading frame 58109197293891977606Rat
1307039Bptfbromodomain PHD finger transcription factor109198027992082731Rat
41304974LOC120095194uncharacterized LOC120095194109205226592054945Rat
41291495LOC120095432U11 spliceosomal RNA109209115592091288Rat
1584081Nol11nucleolar protein 11109211900092141688Rat
1562577Actb-ps10actin, beta, pseudogene 10109214217692143796Rat
1597047Pitpnc1phosphatidylinositol transfer protein, cytoplasmic 1109216355892428971Rat
41017670Snora80dsmall nucleolar RNA, H/ACA box 80D109218865792188789Rat
7727987Mea1-ps1male-enhanced antigen 1, pseudogene 1109223205792232595Rat
41186811LOC120095410small nucleolar RNA SNORA8109231467392314811Rat
1359290Rpl17-ps16ribosomal protein L17, pseudogene 16109237373592374368Rat
1582971Rps23-ps9ribosomal protein S23, pseudogene 9109243427492434789Rat
1359305Psmd12proteasome 26S subunit, non-ATPase 12109243822392457323Rat
1307049Helzhelicase with zinc finger109247940392645234Rat
2249Cacng1calcium voltage-gated channel auxiliary subunit gamma 1109265292492665612Rat
41352320LOC120095197uncharacterized LOC120095197109266150292683626Rat
628804Cacng4calcium voltage-gated channel auxiliary subunit gamma 4109268377892745842Rat
11397811LOC108352150uncharacterized LOC108352150109271883292732169Rat
11411384LOC108352151uncharacterized LOC108352151109278403392784721Rat
628805Cacng5calcium voltage-gated channel auxiliary subunit gamma 5109282744192869632Rat
3395Prkcaprotein kinase C, alpha109288939093288013Rat
1310625Apohapolipoprotein H109334243593356334Rat
1564168Cep112centrosomal protein 112109336605993833133Rat
40973555LOC120095198uncharacterized LOC120095198109382537593830198Rat
41189455LOC120095199uncharacterized LOC120095199109386833193886407Rat
69259Axin2axin 2109389383093927042Rat
11444070LOC108352227uncharacterized LOC108352227109393581193938379Rat
40994897LOC120095200uncharacterized LOC120095200109398628694022344Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10062D10Wox19230108541268585412915Ratregion
10926D10Wox21108913584589135975Ratregion
11137D10Wox17153108705512187055282Ratregion
11169D10Mgh21150108853913988539279Ratregion
34485D10Mgh4116109236936492369470Ratregion
11308D10Wox20107108730761787307728Ratregion
33676D13Mit11137108609084786090990Ratregion
36019D10Rat18156108709561687095772Ratregion
36283D10Rat15170109223832792238497Ratregion
36297D10Rat52149109258511992585263Ratregion
37118D10Rat205141108825022088250361Ratregion
37150D10Rat204216109040439790404618Ratregion
37860D10Rat99172108526953685269708Ratregion
36624D10Rat13306109269895992699242Ratregion
34779D10Rat53128109318476493184904Ratregion
34896D10Rat17172109062743990627625Ratregion
34939D10Rat55175108516067985160854Ratregion
35705D10Rat14172109273262192732793Ratregion
39750D10Rat190214108402232184022527Ratregion
39928D10Rat189200109322381693224011Ratregion
40572D10Rat203138109210872292108854Ratregion
40628D10Rat142225108820760088207815Ratregion
39140D10Rat84145108853914488539279Ratregion
39302D10Rat120249108813239288132643Ratregion
39306D10Rat122206108814941588149627Ratregion
39410D10Rat140211108953494589535132Ratregion
39510D10Rat207141108588704085887185Ratregion
41930D10Arb11312108853904188539353Ratregion
41932D10Arb13270108730758487307853Ratregion
42259D10Rat54326109167613091676468Ratregion
42931D10Rat235141108680759386807720Ratregion
40824D10Rat138223109377473393774956Ratregion
41534D10Rat143166108522034885220506Ratregion
44807D10Got127136108407766784077803Ratregion
44808D10Got124150108556546985565619Ratregion
44808D10Got124150108556546985565684Ratregion
44809D10Got121102108447090584471007Ratregion
44810D10Got12393108579466785794762Ratregion
44816D10Got132216108859446288594678Ratregion
44817D10Got140183109035578190355964Ratregion
44819D10Got135222108925837389258594Ratregion
44821D10Got141160109062750790627669Ratregion
44822D10Got139166109048805390488219Ratregion
44824D10Got142117109216311792163234Ratregion
44825D10Got144188109220606292206252Ratregion
44826D10Got143239109223825792238496Ratregion
44827D10Got146161109246860792468768Ratregion
44829D10Got147188109377675893776944Ratregion
44830D10Got145155109331690693317061Ratregion
629589D10Hmgc2183108705510887055287Ratregion
59969D10Got133269108911600189116268Ratregion
59970D10Got137141109026279290262933Ratregion
59976D10Got163112109397731093977416Ratregion
61322D10Mco8324108661046186610785Ratregion
66378D10Mco28208108474787284748964Ratregion
66378D10Mco28208108474875084748964Ratregion
66500D10Mco67180108666207586662287Ratregion
66524D10Mco74400109220852692209113Ratregion
66525D10Mco75245108543023785430500Ratregion
66693D10Uia7258108687567086875928Ratregion
66715D10Mco15183109399574993995963Ratregion
67318D10Arb12109012861890128836Ratregion
67319D10Arb1574108705506087055320Ratregion
67338D10Arb30129108645711786457246Ratregion
1578868D10Chm159239109285351892853761Ratregion
1578836D10Chm158250109219147692191728Ratregion
1578855D10Chm236250108916307689163326Ratregion
1578856D10Chm233290109281103592811329Ratregion
1630302D10Got134175108989096889891143Ratregion
1630539D10Wox35314108786202487862338Ratregion
1578916D10Chm234278109343128893431570Ratregion
1578923D10Chm235254109385305193853309Ratregion
1578962D10Chm238250109234820192348453Ratregion
1578978D10Chm19160109299748292997642Ratregion
1578980D10Chm12206109298153092981737Ratregion
1578991D10Chm262237108755481887555055Ratregion
1579053D10Chm232275109188651491886791Ratregion
1579066D10Chm231229108925836089258589Ratregion
1579100D10Chm57195108653812286538330Ratregion
1579122D10Chm237208108958722389587433Ratregion
1579139D10Chm10201109234820192348404Ratregion
1579146D10Chm160249109373202493732273Ratregion
1579170D10Chm161150109110648391106633Ratregion
1579174D10Chm49209109280602592806238Ratregion
1579181D10Chm230274108904176889042046Ratregion
1579190D10Chm56230108642080586421038Ratregion
1628185D10Got218245109387914493879389Ratregion
1628374D10Got234134109355315493553288Ratregion
1628428D10Wox56108508095385081059Ratregion
1628816D10Wox47195109121265591212850Ratregion
1641151D10Wox43148109124649591246643Ratregion
1641607D10Wox3087108739367687393763Ratregion
1633129D10Wox31128108739363287393760Ratregion
1640315D10Wox54166108785696987857135Ratregion
1635170D10Wox46108601220086012394Ratregion
1636416D10Wox48261108543023785430498Ratregion
7192353Wnt3956108871754388718499Ratregion
7192144Bax147108653262986532776Ratregion
5035899PMC30226P1413108653240786532820Ratregion
5035901PMC303343P1231108581407885814309Ratregion
5038956RH127429196108651545486515650Ratregion
7206662Krt171196108517886185180057Ratregion
5039250RH127598205108863548388635688Ratregion
5039256RH127601189108923574889235937Ratregion
5036539Wnt3199108872375988723958Ratregion
5036901AU049565192109260296992603161Ratregion
5036979AU049811121108693973586939856Ratregion
5037199RH98557146108764747187647617Ratregion
5035578DDX5164109172690391727067Ratregion
5035631D12S1331261108908970189089962Ratregion
5035635A005R24290108602878686029076Ratregion
5035719WI-22548224109172352891723752Ratregion
5031254PMC114802P1472108653232086532859Ratregion
5033957RH140759241108612524286125483Ratregion
5033985RH140914198108415935784159555Ratregion
5026040RH130673180108858552688585706Ratregion
5031442AU048312198108890958688909784Ratregion
5026246RH131473184108724249987242683Ratregion
5034187RH141697206108692228086922486Ratregion
5034241RH141897197109172368091723877Ratregion
5026360RH131905150108505194485052094Ratregion
5028949RH142936235109173341091733645Ratregion
5034341SGC31491148108569313885693286Ratregion
5034432BF408338127109100336391003490Ratregion
5026446RH132244189108854452388545933Ratregion
5029081RH143445141108747840187478542Ratregion
5032018AU046347177108458751684587690Ratregion
5029391RH144612150108816543688165586Ratregion
5032078D11Mit124124108414377184143895Ratregion
5034692BF417681143108585321185853362Ratregion
5026920RH134042193108536219485362387Ratregion
5032227X63190132108670713286707264Ratregion
5035090SHGC-57386160109024841290248572Ratregion
5029585BE101386165109187085391871018Ratregion
5032397AI835216146108437104284371188Ratregion
5032461D11Ertd539e202108665761986657821Ratregion
5035487AW531537120108881432688814446Ratregion
5027113BCD329379108806478888064867Ratregion
5034870AA849865128108588235185882479Ratregion
5034970BGH65109122838491228661Ratregion
5027399AV006767145108860262488602766Ratregion
5035178BM390393197108443219684432393Ratregion
5027441M3250283108872260688722689Ratregion
5030171BF395827127108929081389290940Ratregion
5032949RH137070180108507587685076056Ratregion
5025094RH126885210108605920686059416Ratregion
5027627AI62693094108513785285137946Ratregion
5030357AW533723158108555469685554853Ratregion
5030365AW533983187109383290593833092Ratregion
5033125RH137689142108797320687973348Ratregion
5027815RH94851241109289450792894747Ratregion
5030455BF403105164109222136892221532Ratregion
5025430RH128285182108524873585248917Ratregion
5027973D16195173108739359987393772Ratregion
5027975D17911162108653278586532947Ratregion
5028015MDB0128189108551872785518916Ratregion
5030613BF398330225109027725490277479Ratregion
5025460RH128403197108739347387393670Ratregion
5025496RH128545158108530054685300704Ratregion
5028141D11Mit58259108947526989475528Ratregion
5028218D2Mit273137109155207191552208Ratregion
5030773AW535161182109178383391784015Ratregion
5025700RH129321152108551757085517722Ratregion
5030931BF411423162108856346688563628Ratregion
5030949BE108457172108611396686114138Ratregion
5033797RH140159194109386838493868578Ratregion
5025826RH129835181108433870684338887Ratregion
5028533AI452358176108940111889401294Ratregion
5052065RH94819245108581257985812822Ratregion
5055007RH143552138108781029287810430Ratregion
5051196RH134495181108600871886008899Ratregion
5053537RH142706170109130439991304569Ratregion
5053549RH142713137108935418689354323Ratregion
5056199RH144240264108846260588462942Ratregion
5051519AI528832113108506696385067076Ratregion
5051521AW10746792108620113886201230Ratregion
5051523AW548911107109108680591086912Ratregion
5051977RH94768116109093032190930437Ratregion
5052011RH94788199108631764386317842Ratregion
5052063RH94818170108570712885707298Ratregion
5052069RH94822211108705542687055637Ratregion
5057430AI030123215109197738491977599Ratregion
5057474AA858847194109172498291725176Ratregion
5052119RH94850204109289486992895073Ratregion
5055349RH143750300109261309092613390Ratregion
5055441RH143803171108516489785165068Ratregion
5054573RH143302104108581283285812936Ratregion
5059456AW530915165108970204389702208Ratregion
5059456AW530915165108970204389702208Ratregion
5055523RH143850123109118030591180428Ratregion
5054863RH143468169109033570790335877Ratregion
5055179RH143651177109057256390572740Ratregion
5056221RH144253168109122004391220211Ratregion
5059634BE097497169108806063288060801Ratregion
5056155RH144215167108710525287105419Ratregion
5056409RH144361106109119599091196096Ratregion
5056439RH144379148108635346886353616Ratregion
5056869RH144627151108956494389565094Ratregion
5052269M6051076109119408291194158Ratregion
5058044BI277428159108535783085357989Ratregion
5052607RH125921238108626512786265365Ratregion
5059050BI278319150109109490391095053Ratregion
5059980BE103640155109101512291015277Ratregion
5049840RH133712209108780313587804378Ratregion
5058432BE096052159108803862088038779Ratregion
5059056BE102766161108693108186931242Ratregion
5050428RH134050193108914820789148400Ratregion
5053535RH142705276108707952087079796Ratregion
5053669RH142782145108681865886818803Ratregion
5053685RH142792127109173524991735376Ratregion
5053693RH142796106108658428686584392Ratregion
5053845RH142884291108671011186710402Ratregion
5053895RH142912205108572882085729025Ratregion
5049878RH133734219109113649891136693Ratregion
5050010RH133810195108736144087361635Ratregion
5052665RH142195169108786079887860965Ratregion
5052785RH142272195108600874686008938Ratregion
5052881RH142328187108736264187362828Ratregion
5051288RH134547180108621943786219617Ratregion
5054485RH143251196109198035091980545Ratregion
5054641RH143341101109261692992617030Ratregion
5054823RH143446133108600161286001745Ratregion
5050894RH134320204108701163487011838Ratregion
5044174RH130452214108805812788058341Ratregion
5043310RH129953216108550827185508487Ratregion
5041084RH128653181108694572386945904Ratregion
5041096RH128660202108692005986920261Ratregion
5043736RH130197197108743202087432215Ratregion
5043824RH130249194108765066187650855Ratregion
5043832RH1302530108706119087061481Ratregion
5044950RH130897180108802493788025117Ratregion
5045206RH131045200109216380792164007Ratregion
5044266RH130504199109198046891980667Ratregion
5044306RH130527183108715302487153295Ratregion
5044414RH130589180108660235086602609Ratregion
5047698RH132477186108635477486354960Ratregion
5048976RH133214188109108254391082731Ratregion
5047768RH132517215108670677086706985Ratregion
5047836RH132556188108533830485338492Ratregion
5046642RH131871205108785291187853116Ratregion
5049490RH133511201108569365885693860Ratregion
5048292RH132819192109265266392652855Ratregion
5048332RH132842189108443441384434602Ratregion
5049718RH133641201108856096588561166Ratregion
5047200RH132191187108527799085278177Ratregion
5039412RH127691182109159068191590865Ratregion
5039644RH127824211108623156386231767Ratregion
5041948RH129151180108638955286389929Ratregion
5041952RH129153214108626518286265396Ratregion
5042166RH129278203108711927587119480Ratregion
5047284RH132239162108598973485989896Ratregion
5048430RH132899220108834747388347693Ratregion
5048440RH132905220108911963489119854Ratregion
5042292RH129350216109108853791088753Ratregion
5042600RH1295330108631848086318677Ratregion
5049610RH133579193108640255286402745Ratregion
5040164RH128126203109198129091981493Ratregion
5040522RH128331184108605917686059360Ratregion
5040576RH128363193108564260385642796Ratregion
5043104RH129834198108612606486126262Ratregion
5039670RH127839211109223258692232928Ratregion
5039722RH127869210108602388486024094Ratregion
5039784RH127905218108551740985517627Ratregion
5042374RH129397188109187163991871827Ratregion
5040806RH128494194108802675888027009Ratregion
5040832RH128509191108620139286201583Ratregion
7192209Wnt3158108871847988718637Ratregion
5040190RH128141198109010993090110128Ratregion
5042642RH129557188108622022286220410Ratregion
5042772RH129636229109187161791871846Ratregion
5043638RH130141180108637158286371762Ratregion
5040314RH128212184108556161385561797Ratregion
5040436RH128282197108619046686190663Ratregion
5041518RH1289030109028923690289418Ratregion
5072768RH137042217108415929084159507Ratregion
5075076RH138384150109024020290240352Ratregion
5074054RH137792140109323863993238779Ratregion
5075528RH138646134108828049688280630Ratregion
5075532RH138648150108658002386580174Ratregion
5075532RH138648150108658532086585470Ratregion
5075940RH138885169108813658088136749Ratregion
5076090RH138973159108533880285339491Ratregion
5076224RH139051177109073819990738376Ratregion
5072654RH136975164109119341991193688Ratregion
5072784RH137051218108620870386208921Ratregion
5076966RH139482217108569000185690218Ratregion
5075956RH138894172108914173289141904Ratregion
5075994RH138916129108724035487240483Ratregion
5076576RH139256148109111201291112160Ratregion
5075750RH138775187108418172384181910Ratregion
5075762RH138782134108738913387389267Ratregion
5076308RH139100159108578037485780533Ratregion
5077800RH139967188108740852987408717Ratregion
5078016RH140093184109176340591763589Ratregion
5078726RH140515121108756508787565208Ratregion
5079918RH141278182109024283590243017Ratregion
5079950RH141296212108926725789267469Ratregion
5078944RH140642192108570528485705476Ratregion
5080092RH141378208109118037691180595Ratregion
5080190RH141437199108820266288202861Ratregion
5070836RH134733187109392664993926836Ratregion
5079280RH140890220108940127989401499Ratregion
5071142RH134911219109086850790868726Ratregion
5080530RH141633181109282770592827886Ratregion
5078644RH140464177109032284690323023Ratregion
5078854RH140590188109033284390333031Ratregion
5071436RH135081197109211919792119394Ratregion
5071460RH135095182108657283886573020Ratregion
5073586RH137521128109149165691491784Ratregion
5073782RH137635151109124581791245968Ratregion
5073802RH137647207109088939290889599Ratregion
5071510RH135124181108409744984097630Ratregion
5071650RH135205211108539300785393218Ratregion
5073882RH137693207109336147393361680Ratregion
5074098RH137820159109176518991765348Ratregion
5074120RH137833130109184015691840286Ratregion
5071056RH134861192108613312186133313Ratregion
5071180RH134933214108872884688729060Ratregion
5071222RH134958189108796245387962642Ratregion
5071394RH135056215108858942788589642Ratregion
5071446RH135087192109097053390970725Ratregion
5073698RH137587127108722206787222194Ratregion
5073804RH137648190108701246187012651Ratregion
5074550RH138081170108807234188072511Ratregion
5071626RH135191198108638902186389219Ratregion
5071892RH135345205108923246989232672Ratregion
5061750BF40297193108670480286704895Ratregion
5065114BF405908189108921820789218396Ratregion
5066934AU048063215108765712987657343Ratregion
5067162AU047923109109155614391556252Ratregion
5067190AU047906157109031158990311746Ratregion
5069963RH94388166108551752785517693Ratregion
5068814AU046911109108527220185272310Ratregion
5069488AU046465153109230605892306206Ratregion
5070267RH94568152109124696191247113Ratregion
5070323AF079366115108694600886946123Ratregion
5069272AU046606151109233623692336387Ratregion
5060334AW531488187108904392389044111Ratregion
5061896BI294088110108511085685110966Ratregion
5062080BI29490595109011349890113593Ratregion
5065190BE121110201109033461590334816Ratregion
5060578BE110438183109130561891305801Ratregion
5060662BI292922165108577952585779690Ratregion
5063934BE120277191108923913589239326Ratregion
5064024AA956078148109087320490873352Ratregion
5065848AI045565184108940339489403578Ratregion
5060090AI072332206109263809392638299Ratregion
5061916BE112030187108703957587039762Ratregion
5063542BE107769185109268522792685412Ratregion
5065186AA963283176108434247284342648Ratregion
5065186AA963283176108434247284342675Ratregion
5063926BE120261161108563231185632472Ratregion
5065716BF412836113108596070885960821Ratregion
5060746BF389074120109365683593656955Ratregion
5062688BF403857161109014257390142734Ratregion
5061084AW532191221108915130489152011Ratregion
5061136AW526267210109212220292122412Ratregion
5062902BI295468187109110820391108390Ratregion
5062916BI295533178108520083485201012Ratregion
5064582BF399386151109076378890763939Ratregion
5064598AI763749143108556209885562242Ratregion
5066218PMC102575P1570109172519791725767Ratregion
5066244PMC125376P2218108785291687853134Ratregion
5061232AW52688193108541247485412567Ratregion
5061284BI287021167108694422286944389Ratregion
5063108BF398398178108533364185333819Ratregion
5061376BE099716155109127761291277767Ratregion
5061448BE099833164109199752891997692Ratregion
5061528BF396623154109026082990260983Ratregion
5084124AA849209106108711779187117897Ratregion
5084244AI176419186108603393086034116Ratregion
5082131BF409851155109090761990907774Ratregion
5082181BI280353185109132692791327112Ratregion
5086070AW529475201108564188085642081Ratregion
5086123AA859237211108780501687805227Ratregion
5082349BE119201190108428098784281177Ratregion
5086467BM385749178108497047184970649Ratregion
5087291BQ208647168109216635992166529Ratregion
5087566PMC317074P1231108581407885814309Ratregion
5089821AU049383192109052953990529731Ratregion
5089315AU049083300108607985286080152Ratregion
5089337AU049096169108511608985117213Ratregion
5083331BG374822130108715162387151753Ratregion
5090823AU049984154109031161090311759Ratregion
5090831AU049988182108458751784587696Ratregion
5090583AU049838212108526770785267921Ratregion
5084560AI177621212109130871791308929Ratregion
5081913BE118743151109080909090809241Ratregion
5087972Jup148108530201085302158Ratregion
5087985Krt1-14224108513778785138011Ratregion
5082139BF409906207108857976688579973Ratregion
5082269BE119088155108702588187026036Ratregion
5085375BE097407165108610905586109220Ratregion
5085465BM391105151108611041186110562Ratregion
5090735AU049932204108882756888827774Ratregion
5090151AU049581167108442175284421919Ratregion
5085946BM383765164108853808088538244Ratregion
5084492AI176866110108601867286018782Ratregion
5081184RH142013216109037542690375642Ratregion
5081318RH142091180109110946591109645Ratregion
5084842AI171597111108765430187654412Ratregion
5085052Ppy191108705526787055458Ratregion
5086423BE107018160108784968887849848Ratregion
5081561AA926148212109093095890931170Ratregion
5081889BF415218161108423225284232410Ratregion
5081995BG372502112108437087284370984Ratregion
5085870AA866270200109143679791436993Ratregion
5503039Fzd2657108756274187563398Ratregion
5503046Fzd2341108756291087563251Ratregion
5503132MLX159108602057786021199Ratregion
5503180ksks3170108715034387150914Ratregion
5507571G61998158108665751086657668Ratregion
5502961Hap1120108527944985279569Ratregion
5503136NSF-1181108877520788775861Ratregion
5503324UniSTS:2380450109117395791175400Ratregion
5503718TLK2_8170902109024754190248443Ratregion
5503734FMNL1_8237387108814295388143341Ratregion
5503811UniSTS:471334890108863926788640158Ratregion
5503900BARC0021140108612953386130016Ratregion
5503845Nmt1279108802231388022592Ratregion
5503994Gcn5l2941108563724785638188Ratregion
5504684PMC357052P1621108621137286211993Ratregion
5504270D17S1439E109108723928387240944Ratregion
5504640PMC321570P11530108409828884098818Ratregion
5504959Pyy1049108706119387062242Ratregion
5505285Axin2105109389934693899451Ratregion
5505764UniSTS:492915654108459895484599608Ratregion
5506019Crhr1257108907640189076830Ratregion
5506266SHGC-53165167108602057186021201Ratregion
5506324Krt15607108506786285068469Ratregion
5506250G35712263108916762189167884Ratregion
5507149UniSTS:22485771109124740991247480Ratregion
5507111UniSTS:2245860108923340389233568Ratregion
5506923G49354434108538989885390332Ratregion
5500099UniSTS:236750104108780580987805913Ratregion
5499625MARC_4113-4114:991938380:380109118776791188448Ratregion
5501632UniSTS:265261274108517864385178917Ratregion
5500097UniSTS:236742210108660165286601862Ratregion
5500338GDB:196138470108871837788718847Ratregion
5502164MARC_7249-7250:996687691:1122108640085186401726Ratregion
5502339RH124538432109108600891086440Ratregion
5500693RH47409139109024829890248437Ratregion
5500863AFM196xf61162109378183893783000Ratregion
5500645RH136418201108602443286024704Ratregion
5500839D17S1990278109172468291724960Ratregion
5501231PMC16008P1387108756320587563592Ratregion
5501261PMC18213P1901108569030485691205Ratregion
5501726Hsd17b1310108601052686011321Ratregion
5502018MARC_23993-23994:1029524382:1147108780670487807500Ratregion
5502020MARC_24031-24032:1029960467:1100108619829186199177Ratregion
5506212Cacng41461109268658992688050Ratregion
5501854MARC_15753-15754:1017935735:10108612877486129586Ratregion
5502078MARC_27470-27471:1034353500:1111108619829686199193Ratregion
5502196MARC_8253-8254:996688461:1385108724300387243388Ratregion
5506731G44926193108523443085234623Ratregion
5502483RH12501581108634728486347365Ratregion
5502216GDB:632822581108653227986532860Ratregion
5502449RH124894139108620132786201466Ratregion
Position Markers

Flank 1: (D10Rat190)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21084,022,321 - 84,022,527 (+)MAPPER
Rnor_6.01086,977,861 - 86,978,064NCBI
Rnor_5.01086,774,898 - 86,775,101UniSTS
RGSC_v3.41087,849,516 - 87,849,720RGD
RGSC_v3.41087,849,517 - 87,849,720UniSTS
RGSC_v3.11087,863,852 - 87,864,235RGD
Celera1082,763,632 - 82,763,835UniSTS
FHH x ACI Map1070.2699RGD
FHH x ACI Map1070.2699UniSTS
Cytogenetic Map10q31UniSTS
Peak: (D10Rat142)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21088,207,600 - 88,207,815 (+)MAPPER
Rnor_6.01091,345,679 - 91,345,893NCBI
Rnor_5.01091,113,514 - 91,113,728UniSTS
RGSC_v3.41092,448,353 - 92,448,568RGD
RGSC_v3.41092,448,354 - 92,448,568UniSTS
RGSC_v3.11092,462,723 - 92,462,938RGD
Celera1086,908,452 - 86,908,666UniSTS
RH 3.4 Map10899.0UniSTS
RH 3.4 Map10899.0RGD
SHRSP x BN Map1066.5UniSTS
SHRSP x BN Map1066.5RGD
Cytogenetic Map10q32.1UniSTS
Flank 2: (D10Mco15)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21093,995,749 - 93,995,963 (+)MAPPER
Rnor_6.01097,308,358 - 97,308,569NCBI
Rnor_5.01097,028,717 - 97,028,928UniSTS
RGSC_v3.41098,392,296 - 98,392,508RGD
RGSC_v3.41098,392,297 - 98,392,508UniSTS
RGSC_v3.11098,406,666 - 98,406,878RGD
Celera1092,658,503 - 92,658,713UniSTS
Cytogenetic Map10 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549846Scl47Serum cholesterol level QTL 473.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)105057470795574707Rat
1354641Bvd2Brain ventricular dilatation QTL 26.360.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)1093223816107057807Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102652195798003205Rat
631552Vetf2Vascular elastic tissue fragility QTL 24.50.0002aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)104114263386142633Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063221094107211142Rat
631555Bp134Blood pressure QTL 1340.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)108051528791230079Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
1298078Stresp5Stress response QTL 52.990.00025blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1042045676104670812Rat
1549831Bss6Bone structure and strength QTL 64lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)1057576521102576521Rat
1579915Bp280Blood pressure QTL 2800.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1090404397107211142Rat
70164Bw21Body weight QTL 214.360.00005body mass (VT:0001259)body weight (CMO:0000012)105379749498952626Rat
4889948Bss91Bone structure and strength QTL 914tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)108256485692369470Rat
61463Bp12Blood pressure QTL 126.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104133325886333258Rat
2298548Neuinf7Neuroinflammation QTL 73.4nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)1072224939107211142Rat
1579919Bp281Blood pressure QTL 2810.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)107437208494965338Rat
1302404Cia27Collagen induced arthritis QTL 272.60.0045joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)1076452683107211142Rat
1300107Rf18Renal function QTL 183.41urine output (VT:0003620)timed urine volume (CMO:0000260)107877551698279596Rat
8694173Bw149Body weight QTL 1494.380.001body mass (VT:0001259)body weight gain (CMO:0000420)104444169989441699Rat
2300218Hpcl2Hepatic cholesterol level QTL 2liver cholesterol amount (VT:0010498)liver cholesterol level (CMO:0001597)104502965095600334Rat
2317754Glom25Glomerulus QTL 253.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)1082685200107211142Rat
70168Eae12Experimental allergic encephalomyelitis QTL 120.0009nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)1092238497101012337Rat
1554317Bmd4Bone mineral density QTL 49.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)101981604299406971Rat
70171Cari1Carrageenan-induced inflammation QTL 14.90.0005hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)1053797385107211142Rat
10450495Bp383Blood pressure QTL 3830.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)107624608594965338Rat
2313856Bp342Blood pressure QTL 3424.40.0001life span trait (VT:0005372)age at time of death (CMO:0001193)108730761796121100Rat
61354Pia10Pristane induced arthritis QTL 100.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
2292617Ept18Estrogen-induced pituitary tumorigenesis QTL 183.9pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)107345313696120911Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101448701189062041Rat
2313103Bss80Bone structure and strength QTL 8020.0001tibia strength trait (VT:1000284)tibia midshaft endosteal cross-sectional area (CMO:0001716)1062057807107057807Rat
2293646Bss25Bone structure and strength QTL 2510.960.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1069738412107211142Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)14232313287323132Rat
2300172Bmd57Bone mineral density QTL 579.80.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1069738412107211142Rat
724516Uae17Urinary albumin excretion QTL 173.6urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)107821062285220348Rat
70193Mcs7Mammary carcinoma susceptibility QTL 72.38mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1072224939107211142Rat
2313105Bss79Bone structure and strength QTL 791.80.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)1062057807107057807Rat
61363Oia3Oil induced arthritis QTL 30.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1087307617107211142Rat
9589030Epfw9Epididymal fat weight QTL 919.240.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)104444169989441699Rat
1357344Bp249Blood pressure QTL 2490.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)106674365598003205Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014487011107057807Rat
70198BpQTLcluster9Blood pressure QTL cluster 92.94arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)104232313287323132Rat
2306970Anxrr22Anxiety related response QTL 225.95fear/anxiety-related behavior trait (VT:1000241)number of periods of voluntary immobility (CMO:0001045)106134527698211570Rat
724530Bp149Blood pressure QTL 1490.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1090627439107211142Rat
1300137Bp186Blood pressure QTL 1863.57arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1090627439107057807Rat
1359017Hrtrt21Heart rate QTL 212.4heart pumping trait (VT:2000009)heart rate (CMO:0000002)105177294096772940Rat
2293663Bss33Bone structure and strength QTL 339.340.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1069738412107211142Rat
2312672Insul15Insulin level QTL 150.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1057134272102134272Rat
6893357Bw102Body weight QTL 1020.50.36body mass (VT:0001259)body weight (CMO:0000012)1080515287101325465Rat
12880384Cm107Cardiac mass QTL 1070.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)90404397107211142Rat
12880385Cm108Cardiac mass QTL 1080.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)90404397107211142Rat
2317029Aia19Adjuvant induced arthritis QTL 192.98joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1066978955107211142Rat
2303589Bw87Body weight QTL 872body mass (VT:0001259)body weight (CMO:0000012)1081285008107211142Rat
724556Pur2Proteinuria QTL 25.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)102242750090627625Rat
12880396Am13Aortic mass QTL 130.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)1090404397107211142Rat
2306793Ean5Experimental allergic neuritis QTL 54.7nervous system integrity trait (VT:0010566)IFNG-secreting splenocyte count (CMO:0002122)107255241693995749Rat
12880398Kidm67Kidney mass QTL 670.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1090404397107211142Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1051770177107211142Rat
2306792Ean4Experimental allergic neuritis QTL 44nervous system integrity trait (VT:0010566)IFNG-secreting splenocyte count (CMO:0002122)108402232193995963Rat
2317039Aia6Adjuvant induced arthritis QTL 64.31joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)1066978955107211142Rat
12880395Cm109Cardiac mass QTL 1090.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)1090404397107211142Rat
61396Bp9Blood pressure QTL 94.80.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1068420376107211142Rat
1358915Stresp7Stress response QTL 73.52blood norepinephrine amount (VT:0005663)plasma norepinephrine level (CMO:0001010)107889965587307728Rat
634320Niddm49Non-insulin dependent diabetes mellitus QTL 494.41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1088539139107211142Rat
1331791Cm31Cardiac mass QTL 313.84606heart mass (VT:0007028)heart wet weight (CMO:0000069)1029299504107211142Rat
70364Bp72Blood pressure QTL 72arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)105112110096121100Rat
10450498Bp384Blood pressure QTL 3840.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1067750049107211142Rat
4889492Pancm2Pancreatic morphology QTL 23.2pancreatic beta cell morphology trait (VT:0005217)ratio of insulin-positive cell area to total area of splenic region of pancreas (CMO:0001814)1076748906107211142Rat
6893366Bw106Body weight QTL 1060.30.47body mass (VT:0001259)body weight (CMO:0000012)1070199100107211142Rat
2293698Bss43Bone structure and strength QTL 435.330.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1059209888104209888Rat
631530Tls3T-lymphoma susceptibility QTL 300.0001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)105177461295600334Rat
1354608Cm33Cardiac mass QTL 332.8heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)105480929299809292Rat
1558643Cm44Cardiac mass QTL 444.80.0000368heart mass (VT:0007028)heart wet weight (CMO:0000069)106134527699703528Rat
631535Cm51Cardiac mass QTL 513heart mass (VT:0007028)calculated heart weight (CMO:0000073)105178628291669536Rat
631267Cia20Collagen induced arthritis QTL 203.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
1558652Bw57Body weight QTL 574.20.0008body mass (VT:0001259)body weight (CMO:0000012)108932701790930437Rat
1576308Schws1Schwannoma susceptibility QTL 10.0041nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1040035094102359817Rat
631269Cia22Collagen induced arthritis QTL 228.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014487011104060283Rat
631270Cia23Collagen induced arthritis QTL 233.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
7411614Foco18Food consumption QTL 180.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)104444169989441699Rat
6893336Cm75Cardiac mass QTL 750.10.87heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)106134527699703528Rat
631547Bp87Blood pressure QTL 874.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104736947092369470Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
12880055Am11Aortic mass QTL 110.004aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)108400727295933025Rat
2292438Bp311Blood pressure QTL 311arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1076246085107211142Rat
2312662Slep8Serum leptin concentration QTL 80.05blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1057134272102134272Rat
2301398Kidm38Kidney mass QTL 380.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)108400727295933025Rat
1600367Mcs15Mammary carcinoma susceptibility QTL 154.5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1085565469103884409Rat
1358188Ept9Estrogen-induced pituitary tumorigenesis QTL 93.9pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)107345313696120911Rat
631537Oia4Oil induced arthritis QTL 4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)107563188787055282Rat
634354Rends3Renal damage susceptibility QTL 30.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)107981378985160854Rat
631538Oia5Oil induced arthritis QTL 5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1087055121107211142Rat
61436Cia5Collagen induced arthritis QTL 54.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1091228102104060283Rat
1642980Bp300Blood pressure QTL 300arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1068383129107211142Rat
631542Bp82Blood pressure QTL 826.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)102652195798952741Rat
2312668Scl65Serum cholesterol level QTL 650.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1057134272102134272Rat


Additional Information

RGD Curation Notes
Note Type Note Reference