Gene: Casc3 (cancer susceptibility 3) Rattus norvegicus
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Symbol: Casc3
Name: cancer susceptibility 3
Description: ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN intracellular mRNA localization (ortholog); PARTICIPATES IN mRNA decay pathway; RNA transport pathway; ASSOCIATED WITH Smith-Magenis syndrome (ortholog); FOUND IN cytoplasm (ortholog); exon-exon junction complex (ortholog); nuclear membrane (ortholog); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Barentsz; Btz; cancer susceptibility candidate 3; cancer susceptibility candidate gene 3 protein homolog; metastatic lymph node 51; Mln51
Orthologs:
Homo sapiens (human) : CASC3 (CASC3, exon junction complex subunit)  HGNC  Alliance
Mus musculus (house mouse) : Casc3 (cancer susceptibility candidate 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Casc3 (CASC3, exon junction complex subunit)
Pan paniscus (bonobo/pygmy chimpanzee) : CASC3 (CASC3, exon junction complex subunit)
Canis lupus familiaris (dog) : CASC3 (CASC3, exon junction complex subunit)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Casc3 (CASC3, exon junction complex subunit)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01086,724,534 - 86,744,485 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01086,520,779 - 86,540,730 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41087,581,850 - 87,602,528 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11087,596,219 - 87,616,898 (+)NCBI
Celera1082,516,863 - 82,536,588 (+)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Casc3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 628766
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2018-08-14
Status: ACTIVE