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Gene: Krt40 (keratin 40) Rattus norvegicus
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Symbol: Krt40
Name: keratin 40
RGD ID: 1359145
Description: Predicted to have structural molecule activity. Predicted to localize to intermediate filament. Orthologous to human KRT40 (keratin 40); INTERACTS WITH atrazine; bisphenol A; trichloroethene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CK-40; cytokeratin-40; K40; Ka36; keratin 40, type I; keratin, type I cytoskeletal 40; keratin-40; type I hair keratin KA36
Orthologs:
Homo sapiens (human) : KRT40 (keratin 40)  HGNC  Alliance
Mus musculus (house mouse) : Krt40 (keratin 40)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Krt40 (keratin 40)
Pan paniscus (bonobo/pygmy chimpanzee) : KRT40 (keratin 40)
Canis lupus familiaris (dog) : KRT40 (keratin 40)
Sus scrofa (pig) : KRT40 (keratin 40)
Chlorocebus sabaeus (African green monkey) : KRT40 (keratin 40)
Heterocephalus glaber (naked mole-rat) : Krt40 (keratin 40)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01087,453,624 - 87,459,670 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1087,453,688 - 87,459,652 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01087,249,905 - 87,255,869 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41088,483,096 - 88,489,060 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11088,497,465 - 88,503,430 (-)NCBI
Celera1083,236,622 - 83,242,586 (-)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Krt40
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359145
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.