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Gene: Mir196c (microRNA 196c) Rattus norvegicus
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Symbol: Mir196c
Name: microRNA 196c
Description: Predicted to be involved in several processes, including cellular response to forskolin; cellular response to leukemia inhibitory factor; and mRNA cleavage involved in gene silencing by miRNA. Orthologous to human MIR196A1 (microRNA 196a-1); INTERACTS WITH cisplatin; bisphenol A (ortholog); resveratrol (ortholog).
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: microRNA mir-196c; rno-mir-196c
Orthologs:
Homo sapiens (human) : MIR196A1 (microRNA 196a-1)  HGNC  Alliance
Mus musculus (house mouse) : Mir196a-1 (microRNA 196a-1)  MGI
Canis lupus familiaris (dog) : MIR196A-1 (microRNA mir-196a-1)
Sus scrofa (pig) : MIR196A-1 (microRNA mir-196a-1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01084,113,578 - 84,113,657 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1084,113,578 - 84,113,657 (+)Ensembl
Rnor_5.01083,916,623 - 83,916,702 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1079,997,352 - 79,997,431 (+)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Mir196c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2325418
Created: 2010-06-02
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.