Fdxr (ferredoxin reductase) - Rat Genome Database

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Gene: Fdxr (ferredoxin reductase) Rattus norvegicus
Analyze
Symbol: Fdxr
Name: ferredoxin reductase
RGD ID: 621648
Description: Enables NADPH binding activity and NADPH-adrenodoxin reductase activity. Involved in NADPH oxidation. Located in mitochondrion. Orthologous to human FDXR (ferredoxin reductase); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; estradiol biosynthetic pathway; INTERACTS WITH (+)-schisandrin B; 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: adrenodoxin reductase; AR; ferredoxin--NADP(+) reductase; NADPH:adrenodoxin oxidoreductase, mitochondrial
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810101,006,845 - 101,015,582 (-)NCBIGRCr8
mRatBN7.210100,507,863 - 100,516,649 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10100,507,865 - 100,516,658 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10105,568,049 - 105,576,738 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010105,031,109 - 105,039,798 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010100,428,857 - 100,437,546 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010103,817,724 - 103,826,413 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10103,817,704 - 103,826,448 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010104,468,590 - 104,477,279 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410105,342,684 - 105,351,374 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.110105,357,187 - 105,365,878 (-)NCBI
Celera1099,084,255 - 99,092,947 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FdxrRatArterial Occlusive Diseases  ISOFDXR (Homo sapiens)401793723mRNA:increased expression:leg blood vessel (human)RGD 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FdxrRatAuditory Neuropathy  ISOFDXR (Homo sapiens)8554872ClinVar Annotator: match by term: Auditory dys-synchronyClinVarPMID:25741868 more ...
FdxrRatfundus dystrophy  ISOFDXR (Homo sapiens)8554872ClinVar Annotator: match by term: Retinal dystrophyClinVarPMID:25741868
FdxrRatgenetic disease  ISOFDXR (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:24033266 more ...
FdxrRatMultiple mitochondrial dysfunctions syndrome 9A  ISOFDXR (Homo sapiens)8554872ClinVar more ...ClinVarPMID:24033266 more ...
FdxrRatMultiple mitochondrial dysfunctions syndrome 9B  ISOFDXR (Homo sapiens)8554872ClinVar Annotator: match by term: Multiple mitochondrial dysfunctions syndrome 9bClinVarPMID:25741868 more ...
FdxrRatoptic atrophy  ISOFDXR (Homo sapiens)8554872ClinVar Annotator: match by term: Optic atrophyClinVarPMID:25741868
FdxrRatOPTIC ATROPHY-ATAXIA-PERIPHERAL NEUROPATHY-GLOBAL DEVELOPMENTAL DELAY SYNDROME  ISOFDXR (Homo sapiens)8554872ClinVar Annotator: match by term: Optic atrophy-ataxia-peripheral neuropathy-global developmental delay syndromeClinVarPMID:25741868 more ...
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FdxrRatMultiple mitochondrial dysfunctions syndrome 9A  ISOFDXR (Homo sapiens)7240710 OMIM 
FdxrRatMultiple mitochondrial dysfunctions syndrome 9B  ISOFDXR (Homo sapiens)7240710 OMIM 

1 to 20 of 146 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FdxrRat(+)-schisandrin B multiple interactionsEXP 6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of FDXR mRNA]CTDPMID:31150632
FdxrRat(-)-demecolcine increases expressionISOFDXR (Homo sapiens)6480464Demecolcine results in increased expression of FDXR mRNACTDPMID:23649840
FdxrRat(1->4)-beta-D-glucan multiple interactionsISOFdxr (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of FDXR mRNACTDPMID:36331819
FdxrRat(S)-colchicine decreases expressionISOFDXR (Homo sapiens)6480464Colchicine results in decreased expression of FDXR mRNACTDPMID:24211769
FdxrRat1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane multiple interactionsEXP 64804642 more ...CTDPMID:19414516
FdxrRat1,2-dimethylhydrazine multiple interactionsISOFdxr (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of FDXR mRNACTDPMID:22206623
FdxrRat17alpha-ethynylestradiol multiple interactionsISOFdxr (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of FDXR mRNACTDPMID:17942748
FdxrRat17alpha-ethynylestradiol decreases expressionEXP 6480464Ethinyl Estradiol results in decreased expression of FDXR mRNACTDPMID:12655037 and PMID:17557909
FdxrRat17beta-estradiol multiple interactionsISOFDXR (Homo sapiens)6480464[Estradiol co-treated with TGFB1 protein] results in decreased expression of FDXR mRNACTDPMID:30165855
FdxrRat2,2',4,4'-Tetrabromodiphenyl ether affects expressionISOFdxr (Mus musculus)64804642 more ...CTDPMID:30294300
FdxrRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOFdxr (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of FDXR mRNACTDPMID:17942748
FdxrRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOFdxr (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of FDXR mRNACTDPMID:21570461
FdxrRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of FDXR mRNACTDPMID:21215274 and PMID:32109520
FdxrRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOFDXR (Homo sapiens)6480464pifithrin inhibits the reaction [Tetrachlorodibenzodioxin results in increased expression of FDXR mRNA]CTDPMID:20064835
FdxrRat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of FDXR mRNACTDPMID:21346803
FdxrRat2,6-dimethoxyphenol multiple interactionsISOFDXR (Homo sapiens)6480464[Sodium Chloride co-treated with pyrogallol 1 and 3-dimethyl ether] results in increased expression of FDXR proteinCTDPMID:38598786
FdxrRat3,3',4,4',5-pentachlorobiphenyl decreases expressionEXP 64804643 more ...CTDPMID:23196670
FdxrRat3-chloropropane-1,2-diol decreases expressionEXP 6480464alpha-Chlorohydrin results in decreased expression of FDXR proteinCTDPMID:26072098
FdxrRat3-methylcholanthrene increases expressionISOFDXR (Homo sapiens)6480464Methylcholanthrene results in increased expression of FDXR mRNACTDPMID:22100608
FdxrRat4,4'-diaminodiphenylmethane decreases expressionISOFdxr (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of FDXR mRNACTDPMID:18648102

1 to 20 of 146 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FdxrRatcholesterol metabolic process involved_inIEAUniPathway:UPA002961600115GO_REF:0000041UniProtGO_REF:0000041
FdxrRatcholesterol metabolic process involved_inIEAUniProtKB-KW:KW-01531600115GO_REF:0000043UniProtGO_REF:0000043
FdxrRatlipid metabolic process involved_inIEAUniProtKB-KW:KW-04431600115GO_REF:0000043UniProtGO_REF:0000043
FdxrRatsteroid biosynthetic process involved_inIBAFB:FBgn0015582 and PANTHER:PTN0009411381600115GO_REF:0000033GO_CentralGO_REF:0000033
FdxrRatsteroid metabolic process involved_inIEAUniProtKB-KW:KW-07531600115GO_REF:0000043UniProtGO_REF:0000043
FdxrRatubiquinone biosynthetic process acts_upstream_of_positive_effectISSUniProtKB:P225701600115GO_REF:0000024UniProtGO_REF:0000024
FdxrRatubiquinone biosynthetic process acts_upstream_of_positive_effectISOFDXR (Homo sapiens)1624291 PMID:38425362RGDPMID:38425362

Cellular Component
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FdxrRatmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
FdxrRatmitochondrial inner membrane located_inIEAUniProtKB-SubCell:SL-01681600115GO_REF:0000044UniProtGO_REF:0000044
FdxrRatmitochondrial inner membrane located_inIEAUniProtKB-KW:KW-09991600115GO_REF:0000043UniProtGO_REF:0000043
FdxrRatmitochondrion located_inISOFDXR (Homo sapiens) and UniProtKB:P22570-61624291 RGDGO_REF:0000052
FdxrRatmitochondrion located_inIEAUniProtKB-KW:KW-04961600115GO_REF:0000043UniProtGO_REF:0000043
FdxrRatmitochondrion located_inIDA 13506267PMID:2170421UniProt 
FdxrRatmitochondrion located_inIEAUniProtKB-SubCell:SL-01731600115GO_REF:0000044UniProtGO_REF:0000044
FdxrRatmitochondrion is_active_inIBAFB:FBgn0015582 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
FdxrRatmitochondrion is_active_inISOFDXR (Homo sapiens)1624291 PMID:29040572RGDPMID:29040572
1 to 9 of 9 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
FdxrRatferredoxin-NADP+ reductase activity  IDA 727285 RGD 
FdxrRatferredoxin-NADP+ reductase activity enablesISSUniProtKB:P225701600115GO_REF:0000024UniProtGO_REF:0000024
FdxrRatferredoxin-NADP+ reductase activity enablesISOFDXR (Homo sapiens)1624291 PMID:38425362RGDPMID:38425362
FdxrRatferredoxin-NADP+ reductase activity enablesIEARHEA:201251600115GO_REF:0000116RHEAGO_REF:0000116
FdxrRatoxidoreductase activity enablesIEAUniProtKB-KW:KW-05601600115GO_REF:0000043UniProtGO_REF:0000043
FdxrRatoxidoreductase activity enablesIEAInterPro:IPR021163 more ...1600115GO_REF:0000002InterProGO_REF:0000002

RGD Manual Annotations


  

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#
Reference Title
Reference Citation
1. Assessment of gene expression profiles in peripheral occlusive arterial disease. Bubenek S, etal., Can J Cardiol. 2012 Nov-Dec;28(6):712-20. doi: 10.1016/j.cjca.2012.03.013. Epub 2012 Jun 19.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Induction and mitochondrial localization of cytochrome P450scc system enzymes in normal and transformed ovarian granulosa cells. Hanukoglu I, etal., J Cell Biol. 1990 Oct;111(4):1373-81.
5. Iron-sulfur cluster biogenesis in mammalian cells: New insights into the molecular mechanisms of cluster delivery. Maio N and Rouault TA, Biochim Biophys Acta. 2015 Jun;1853(6):1493-512. doi: 10.1016/j.bbamcr.2014.09.009. Epub 2014 Sep 19.
6. Differential capacity for cholesterol transport and processing in large and small rat luteal cells. McLean MP, etal., Endocrinology. 1992 Nov;131(5):2203-12.
7. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
8. Androgen synthesis in adrenarche. Miller WL Rev Endocr Metab Disord. 2009 Mar;10(1):3-17.
9. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
10. GOA pipeline RGD automated data pipeline
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. cDNA cloning, overproduction and characterization of rat adrenodoxin reductase. Sagara Y, etal., Biochim Biophys Acta 1999 Oct 12;1434(2):284-95.
1 to 12 of 12 rows
PMID:12477932   PMID:12865426   PMID:14651853   PMID:15489334   PMID:18614015  



Fdxr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810101,006,845 - 101,015,582 (-)NCBIGRCr8
mRatBN7.210100,507,863 - 100,516,649 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10100,507,865 - 100,516,658 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10105,568,049 - 105,576,738 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010105,031,109 - 105,039,798 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010100,428,857 - 100,437,546 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010103,817,724 - 103,826,413 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10103,817,704 - 103,826,448 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010104,468,590 - 104,477,279 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410105,342,684 - 105,351,374 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.110105,357,187 - 105,365,878 (-)NCBI
Celera1099,084,255 - 99,092,947 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
FDXR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381774,862,497 - 74,872,994 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1774,862,497 - 74,873,031 (-)EnsemblGRCh38hg38GRCh38
GRCh371772,858,619 - 72,869,119 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361770,370,214 - 70,380,751 (-)NCBINCBI36Build 36hg18NCBI36
Build 341770,370,220 - 70,380,692NCBI
Celera1769,451,871 - 69,462,405 (-)NCBICelera
Cytogenetic Map17q25.1NCBI
HuRef1768,269,147 - 68,279,670 (-)NCBIHuRef
CHM1_11772,923,450 - 72,933,984 (-)NCBICHM1_1
T2T-CHM13v2.01775,754,283 - 75,764,782 (-)NCBIT2T-CHM13v2.0
Fdxr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911115,158,850 - 115,167,925 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11115,158,850 - 115,167,876 (-)EnsemblGRCm39 Ensembl
GRCm3811115,268,024 - 115,277,101 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11115,268,024 - 115,277,050 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711115,129,339 - 115,138,283 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611115,084,115 - 115,093,059 (-)NCBIMGSCv36mm8
Celera11127,033,656 - 127,042,608 (-)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1180.84NCBI
Fdxr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555531,746,670 - 1,755,315 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555531,746,759 - 1,755,316 (-)NCBIChiLan1.0ChiLan1.0
FDXR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21990,899,791 - 90,910,451 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11795,722,695 - 95,733,347 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01768,808,123 - 68,818,642 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11774,364,343 - 74,374,852 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1774,364,343 - 74,374,852 (-)Ensemblpanpan1.1panPan2
FDXR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.195,567,411 - 5,577,427 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl95,567,328 - 5,577,277 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha96,246,975 - 6,256,975 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.096,239,485 - 6,249,477 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl96,239,458 - 6,249,473 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.196,276,453 - 6,286,449 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.096,387,040 - 6,397,024 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.096,447,362 - 6,457,354 (+)NCBIUU_Cfam_GSD_1.0
Fdxr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056026,188,212 - 6,196,794 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936594215,155 - 223,771 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936594215,165 - 223,715 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FDXR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl126,372,009 - 6,382,769 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1126,372,224 - 6,382,769 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2126,362,701 - 6,373,244 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap12pNCBI
FDXR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11646,785,669 - 46,796,154 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1646,785,591 - 46,796,187 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607717,571,055 - 17,581,546 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fdxr
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248014,713,519 - 4,722,612 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248014,714,341 - 4,722,588 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Fdxr
32 total Variants


Assembly: Rnor_5.0

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
10 104476553 104476554 T G snv SR/JrHsd (MCW) View more Information

Predicted Target Of
Summary Value
Count of predictions:138
Count of miRNA genes:106
Interacting mature miRNAs:112
Transcripts:ENSRNOT00000004592
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 61 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1354641Bvd2Brain ventricular dilatation QTL 26.360.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)1093223816107057807Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063221094107211142Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
1298078Stresp5Stress response QTL 52.990.00025blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1042045676104670812Rat
1549831Bss6Bone structure and strength QTL 64lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)1057576521102576521Rat
1579915Bp280Blood pressure QTL 2800.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1090404397107211142Rat
2298548Neuinf7Neuroinflammation QTL 73.4nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)1072224939107211142Rat
1302404Cia27Collagen induced arthritis QTL 272.60.0045joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)1076452683107211142Rat
2317754Glom25Glomerulus QTL 253.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)1082685200107211142Rat
70168Eae12Experimental allergic encephalomyelitis QTL 120.0009nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)1092238497101012337Rat

1 to 10 of 61 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000085636   ⟹   ENSRNOP00000075248
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl10100,507,865 - 100,516,658 (-)Ensembl
Rnor_6.0 Ensembl10103,817,704 - 103,826,448 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000103108   ⟹   ENSRNOP00000079013
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl10100,507,865 - 100,516,658 (-)Ensembl
RefSeq Acc Id: NM_024153   ⟹   NP_077067
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr810101,006,846 - 101,015,535 (-)NCBI
mRatBN7.210100,507,865 - 100,516,556 (-)NCBI
Rnor_6.010103,817,724 - 103,826,413 (-)NCBI
Rnor_5.010104,468,590 - 104,477,279 (+)NCBI
RGSC_v3.410105,342,684 - 105,351,374 (-)RGD
Celera1099,084,255 - 99,092,947 (-)RGD
Sequence:
RefSeq Acc Id: XM_039086911   ⟹   XP_038942839
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr810101,006,845 - 101,015,582 (-)NCBI
mRatBN7.210100,507,863 - 100,516,449 (-)NCBI
Protein RefSeqs NP_077067 (Get FASTA)   NCBI Sequence Viewer  
  XP_038942839 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH88844 (Get FASTA)   NCBI Sequence Viewer  
  BAA23759 (Get FASTA)   NCBI Sequence Viewer  
  EDM06569 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000075248
  ENSRNOP00000075248.1
GenBank Protein P56522 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_077067   ⟸   NM_024153
- Peptide Label: precursor
- UniProtKB: P56522 (UniProtKB/Swiss-Prot),   A6HKL4 (UniProtKB/TrEMBL),   A0A8I6G2P7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000075248   ⟸   ENSRNOT00000085636
RefSeq Acc Id: XP_038942839   ⟸   XM_039086911
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000079013   ⟸   ENSRNOT00000103108
FAD/NAD(P)-binding

Name Modeler Protein Id AA Range Protein Structure
AF-P56522-F1-model_v2 AlphaFold P56522 1-494 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13697881
Promoter ID:EPDNEW_R8406
Type:initiation region
Name:Fdxr_1
Description:ferredoxin reductase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.010103,826,465 - 103,826,525EPDNEW


1 to 26 of 26 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-22693 BioCyc
Ensembl Genes ENSRNOG00000058497 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000085636 ENTREZGENE
  ENSRNOT00000085636.2 UniProtKB/Swiss-Prot
Gene3D-CATH 3.50.50.60 UniProtKB/Swiss-Prot
  NAD(P)-binding Rossmann-like Domain UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7308634 IMAGE-MGC_LOAD
InterPro FAD/NAD-bd_sf UniProtKB/Swiss-Prot
  FAD/NAD-binding_dom UniProtKB/Swiss-Prot
  Ferredox_Rdtase UniProtKB/Swiss-Prot
  Ferredox_Rdtase_adrenod UniProtKB/Swiss-Prot
KEGG Report rno:79122 UniProtKB/Swiss-Prot
MGC_CLONE MGC:105420 IMAGE-MGC_LOAD
NCBI Gene 79122 ENTREZGENE
PANTHER GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC-LIKE UniProtKB/Swiss-Prot
  GLUTAMATE SYNTHASE 1 [NADH], CHLOROPLASTIC-LIKE UniProtKB/Swiss-Prot
Pfam Pyr_redox_2 UniProtKB/Swiss-Prot
PhenoGen Fdxr PhenoGen
PIRSF FNR UniProtKB/Swiss-Prot
PRINTS ADXRDTASE UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000058497 RatGTEx
Superfamily-SCOP Nucleotide-binding domain UniProtKB/Swiss-Prot
  SSF51905 UniProtKB/Swiss-Prot
UniProt A0A8I6G2P7 ENTREZGENE, UniProtKB/TrEMBL
  A6HKL4 ENTREZGENE, UniProtKB/TrEMBL
  ADRO_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 26 of 26 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Fdxr  ferredoxin reductase    adrenodoxin reductase  Name updated 1299863 APPROVED
2002-08-07 Fdxr  adrenodoxin reductase      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_physical_interaction binds to adrenodoxin (Ad) by ionic interaction 727285