Oia5 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Oia5 (Oil induced arthritis QTL 5) Rattus norvegicus

Symbol: Oia5
Name: Oil induced arthritis QTL 5
RGD ID: 631538
Previously known as: Oia3b
Trait: joint integrity trait   (VT:0010548)    
Measurement Type: joint inflammation composite score   (CMO:0000919)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21087,055,121 - 107,211,142RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01090,041,957 - 112,626,471RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01089,831,438 - 112,200,500RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41091,168,332 - 110,718,848RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.11091,182,702 - 110,733,352RGD
Cross Type: Not Available
Strains Crossed: LEW.1AV1.DA-(D10Wox17-D10Rat135)/Ubc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition
squalene  (IDA)

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Rats made congenic for Oia3 on chromosome 10 become susceptible to squalene-induced arthritis. Holm BC, etal., Hum Mol Genet 2001 Mar 15;10(6):565-72.
2. The complexity in hunting for candidate genes within QTL that determine susceptibility to arthritis in rats. Xiong Q, etal., Crit Rev Immunol. 2008;28(2):127-57.
Related QTLs

Related QTL Description Reference
Oia3 maps to same region RGD:62404
Oia4 maps to same region RGD:62404
Oia6 maps to same region RGD:62404


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3385Ppypancreatic polypeptide108705474787056044Rat
1593289Pyypeptide YY108706115587062278Rat
41281133LOC120095294uncharacterized LOC120095294108708067987083716Rat
1565783NagsN-acetylglutamate synthase108709833087102465Rat
1306490Tmem101transmembrane protein 101108710511587108868Rat
1309441Lsm12LSM12 homolog108711833487140395Rat
727875G6pc3glucose 6 phosphatase catalytic subunit 3108714698787151223Rat
619980Hdac5histone deacetylase 5108715297887187921Rat
1305385Hrobhomologous recombination factor with OB-fold108720601787222483Rat
1563878Asb16ankyrin repeat and SOCS box-containing 16108722597687233078Rat
1304758Tmub2transmembrane and ubiquitin-like domain containing 2108723854387242968Rat
1311493Atxn7l3ataxin 7-like 3108724284387250186Rat
3927Ubtfupstream binding transcription factor108725821787274291Rat
3710Slc4a1solute carrier family 4 member 1 (Diego blood group)108730686587323132Rat
1590900Pno1-ps1partner of NOB1 homolog (S. cerevisiae), pseudogene 1108734603987347309Rat
735057Rundc3aRUN domain containing 3A108735262487361767Rat
1306193Slc25a39solute carrier family 25, member 39108736249487367358Rat
61983Grngranulin precursor108738767287393777Rat
1307966Fam171a2family with sequence similarity 171, member A2108739388887404051Rat
1596428Itga2bintegrin subunit alpha 2b108740853287426055Rat
1596463Gpatch8G patch domain containing 8108743202087512594Rat
11482925LOC10835213960S ribosomal protein L36 pseudogene108752776687528169Rat
7648353LOC102550111uncharacterized LOC102550111108753824387552344Rat
71012Fzd2frizzled class receptor 2108756186687563776Rat
1591208Atp6v0c-ps1ATPase H+ transporting V0 subunit C, pseudogene 1108757454487584265Rat
1563746Meiocmeiosis specific with coiled-coil domain108762880787646485Rat
1311929Ccdc43coiled-coil domain containing 43108765055487662788Rat
9450974LOC103693436uncharacterized LOC103693436108769411187694518Rat
41276998LOC120095185uncharacterized LOC120095185108770161987724858Rat
7649594Dbf4bDBF4B-CDC7 kinase regulatory subunit108771380587719197Rat
1307515Adam11ADAM metallopeptidase domain 11108772411587742773Rat
628889Gjc1gap junction protein, gamma 1108775819287785443Rat
1306907Higd1bHIG1 hypoxia inducible domain family, member 1B108779886487804459Rat
1560116Eftud2elongation factor Tu GTP binding domain containing 2108780489387852181Rat
1562370Ccdc103coiled-coil domain containing 103108784632787849959Rat
1307851FAM187Afamily with sequence similarity 187, member A108785086187852332Rat
2679Gfapglial fibrillary acidic protein108785289187861631Rat
1310360Kif18bkinesin family member 18B108787042487889895Rat
9420753Rpl22l4ribosomal protein L22 like 4108789394887894538Rat
1306039C1ql1complement C1q like 1108790212587909556Rat
1359211Dcakddephospho-CoA kinase domain containing108795773887989002Rat
628642Nmt1N-myristoyltransferase 1108798882688025405Rat
1310903Plcd3phospholipase C, delta 3108802670788048080Rat
1308404Acbd4acyl-CoA binding domain containing 4108804805888062612Rat
1559851Hexim1HEXIM P-TEFb complex subunit 1108806280888064920Rat
1311635Hexim2HEXIM P-TEFb complex subunit 2108807787088084776Rat
1311042Fmnl1formin-like 1108811587688143342Rat
2319718Efcab15EF-hand calcium binding domain 15108814338288153693Rat
1359156Spata32spermatogenesis associated 32108815324088164389Rat
41262638LOC120095296uncharacterized LOC120095296108815384988184195Rat
1310487Map3k14mitogen-activated protein kinase kinase kinase 14108816534988215558Rat
41159998LOC120095297uncharacterized LOC120095297108821375888225854Rat
735202Arhgap27Rho GTPase activating protein 27108828047088313225Rat
1308010Plekhm1pleckstrin homology and RUN domain containing M1108831383788366182Rat
1559753Lrrc37aleucine rich repeat containing 37A108839583788433519Rat
735046Prp2l1proline rich protein 2-like 1108846226288540642Rat
9180709LOC103693460uncharacterized LOC103693460108854067888551970Rat
1306968Lyzl6lysozyme-like 6108854434288549177Rat
1589060Rprmlreprimo-like108856024888561252Rat
62079Gosr2golgi SNAP receptor complex member 2108858529188605642Rat
1564452Magmas-ps1mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction, pseudogene 1108860237988602899Rat
41172258LOC120095298uncharacterized LOC120095298108860571288613782Rat
1309574Wnt9bWnt family member 9B108863533088657035Rat
3972Wnt3Wnt family member 3108868019888724170Rat
621594NsfN-ethylmaleimide sensitive factor, vesicle fusing ATPase108872791288857375Rat
621271Arf2ADP-ribosylation factor 2108886783688889654Rat
61276Crhr1corticotropin releasing hormone receptor 1108904018689083481Rat
1560562Sppl2csignal peptide peptidase like 2C108909527989097487Rat
69329Maptmicrotubule-associated protein tau108913864489236137Rat
6486111LOC100912629uncharacterized LOC100912629108914812389152191Rat
1311429Kansl1KAT8 regulatory NSL complex subunit 1108923766789368735Rat
41075489LOC120095423small nucleolar RNA SNORA21108926699089267117Rat
1304921Cdc27cell division cycle 27108940072089449816Rat
1591197Myl4myosin, light chain 4108944945689485365Rat
1591196Gstp1-ps2glutathione S-transferase pi 1, pseudogene 2108949816989499906Rat
628868Itgb3integrin subunit beta 3108950991789564679Rat
1305423Efcab3EF-hand calcium binding domain 3108958352690077260Rat
11381204LOC108352141uncharacterized LOC108352141108988662589887932Rat
41249496LOC120095378U6 spliceosomal RNA109003343690033542Rat
1310240Mettl2methyltransferase like 2109009552790109354Rat
1590899Cactin-ps2cactin, spliceosome C complex subunit, pseudogene 2109014221190155347Rat
1310907Tlk2tousled-like kinase 2109015444990248562Rat
41034882LOC120095467U6atac minor spliceosomal RNA109022333990223431Rat
41101625Cycs-ps6cytochrome c, somatic, pseudogene 6109022735690227705Rat
1559436Mrc2mannose receptor, C type 2109026198690323187Rat
41318785LOC120095186uncharacterized LOC120095186109026236690267267Rat
41334181LOC120095187uncharacterized LOC120095187109028417790289455Rat
1311692Marchf10membrane associated ring-CH-type finger 10109033278390423109Rat
40927017LOC120095189uncharacterized LOC120095189109034159690366478Rat
11389364LOC108352144uncharacterized LOC108352144109042062290461890Rat
40973775Trnav-aac25transfer RNA valine (anticodon AAC) 25109054823190548311Rat
1309285Tanc2tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2109055312490873477Rat
41337284LOC120095493U4 spliceosomal RNA109056480690564957Rat
41292971LOC120095191uncharacterized LOC120095191109065984090687446Rat
41135105LOC120095351U6 spliceosomal RNA109074981890749924Rat
9215295Snupn-ps1snurportin 1, pseudogene 1109081068190821759Rat
1310987Cyb561cytochrome b-561109087805290888734Rat
2493Aceangiotensin I converting enzyme109091031690930437Rat
41378188LOC120095193uncharacterized LOC120095193109091905390920018Rat
1561299Ace3angiotensin I converting enzyme (peptidyl-dipeptidase A) 3109093335990949035Rat
620304Kcnh6potassium voltage-gated channel subfamily H member 6109094924090970746Rat
1305140Dcaf7DDB1 and CUL4 associated factor 7109097409590996275Rat
1306784Taco1translational activator of cytochrome c oxidase I109100259091010494Rat
1304575Map3k3mitogen activated protein kinase kinase kinase 3109102017491088852Rat
1309967Limd2LIM domain containing 2109109027991092772Rat
727905StradaSTE20 related adaptor alpha109109484991123890Rat
1308813Ccdc47coiled-coil domain containing 47109113030391148829Rat
1304909Ddx42DEAD-box helicase 42109114892691180940Rat
1307110Ftsj3FtsJ RNA 2'-O-methyltransferase 3109118094591187389Rat
708376Psmc5proteasome 26S subunit, ATPase 5109118776391193697Rat
41071609LOC120095430small nucleolar RNA SNORA51109119022791190352Rat
69289Smarcd2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2109119375291202817Rat
69435Tcam1testicular cell adhesion molecule 1109120847091220484Rat
2686Gh1growth hormone 1109122810291230079Rat
620012Cd79bCD79b molecule109123935491242500Rat
3636Scn4asodium voltage-gated channel alpha subunit 4109124693691296670Rat
11498743LOC108352146uncharacterized LOC108352146109126843491276253Rat
1307288Prr29proline rich 29109130582091320661Rat
1359660Icam2intercellular adhesion molecule 2109130860891319536Rat
1559716Ern1endoplasmic reticulum to nucleus signaling 1109132688991421201Rat
41285482Rps10-ps6ribosomal protein S10, pseudogene 6109140280291403291Rat
7650056LOC102546698uncharacterized LOC102546698109143517591435535Rat
41075578Snord104small nucleolar RNA, C/D box 104109143531391435382Rat
41231368Snora50csmall nucleolar RNA, H/ACA box 50C109143557091435702Rat
1305112Tex2testis expressed 2109143662991546240Rat
41384166Trnap-agg83transfer RNA proline (anticodon AGG) 83109145255691452636Rat
61927Pecam1platelet and endothelial cell adhesion molecule 1109159052191652279Rat
620488Milr1mast cell immunoglobulin-like receptor 1109168428891705284Rat
1305128Polg2DNA polymerase gamma 2, accessory subunit109171258691723008Rat
619906Ddx5DEAD-box helicase 5109172350891732210Rat
9685093Mir3064microRNA 3064109172580091725866Rat
1309655Cep95centrosomal protein 95109173211191760095Rat
1310067Smurf2SMAD specific E3 ubiquitin protein ligase 2109176179891862485Rat
41360186Trnaa-agc91transfer RNA alanine (anticodon AGC) 91109178763191787711Rat
41351506LOC120095301survival of motor neuron-related-splicing factor 30-like109187048191872151Rat
11437264LOC108352149uncharacterized LOC108352149109190004691902191Rat
621419Kpna2karyopherin subunit alpha 2109193395191946115Rat
11508819Trnar-ccg2transfer RNA arginine (anticodon CCG) 2109195840491958476Rat
1565033C10h17orf58similar to human chromosome 17 open reading frame 58109197293891977606Rat
1307039Bptfbromodomain PHD finger transcription factor109198027992082731Rat
41304974LOC120095194uncharacterized LOC120095194109205226592054945Rat
41291495LOC120095432U11 spliceosomal RNA109209115592091288Rat
1584081Nol11nucleolar protein 11109211900092141688Rat
1562577Actb-ps10actin, beta, pseudogene 10109214217692143796Rat
1597047Pitpnc1phosphatidylinositol transfer protein, cytoplasmic 1109216355892428971Rat
41017670Snora80dsmall nucleolar RNA, H/ACA box 80D109218865792188789Rat
7727987Mea1-ps1male-enhanced antigen 1, pseudogene 1109223205792232595Rat
41186811LOC120095410small nucleolar RNA SNORA8109231467392314811Rat
1359290Rpl17-ps16ribosomal protein L17, pseudogene 16109237373592374368Rat
1582971Rps23-ps9ribosomal protein S23, pseudogene 9109243427492434789Rat
1359305Psmd12proteasome 26S subunit, non-ATPase 12109243822392457323Rat
1307049Helzhelicase with zinc finger109247940392645234Rat
2249Cacng1calcium voltage-gated channel auxiliary subunit gamma 1109265292492665612Rat
41352320LOC120095197uncharacterized LOC120095197109266150292683626Rat
628804Cacng4calcium voltage-gated channel auxiliary subunit gamma 4109268377892745842Rat
11397811LOC108352150uncharacterized LOC108352150109271883292732169Rat
11411384LOC108352151uncharacterized LOC108352151109278403392784721Rat
628805Cacng5calcium voltage-gated channel auxiliary subunit gamma 5109282744192869632Rat
3395Prkcaprotein kinase C, alpha109288939093288013Rat
1310625Apohapolipoprotein H109334243593356334Rat
1564168Cep112centrosomal protein 112109336605993833133Rat
40973555LOC120095198uncharacterized LOC120095198109382537593830198Rat
41189455LOC120095199uncharacterized LOC120095199109386833193886407Rat
69259Axin2axin 2109389383093927042Rat
11444070LOC108352227uncharacterized LOC108352227109393581193938379Rat
40994897LOC120095200uncharacterized LOC120095200109398628694022344Rat
7698326LOC102550112uncharacterized LOC102550112109401627294038653Rat
7529341LOC102550334uncharacterized LOC102550334109404316194103566Rat
41387346LOC120095201uncharacterized LOC120095201109410493294119320Rat
41147803LOC120095202uncharacterized LOC120095202109413667794144071Rat
7551922LOC102550454uncharacterized LOC102550454109416157394170717Rat
1597401Rpl10a-ps5ribosomal protein L10A, pseudogene 5109417369994175006Rat
1565459Mifl4macrophage migration inhibitory factor like 4109419199894192520Rat
3572Rgs9regulator of G-protein signaling 9109419526594270892Rat
7579672LOC102550782uncharacterized LOC102550782109424150994246052Rat
41120726LOC120095203uncharacterized LOC120095203109428954194296979Rat
7625474LOC102550846uncharacterized LOC102550846109431685794318116Rat
1310221Gna13G protein subunit alpha 13109433793994370774Rat
1304846Amz2archaelysin family metallopeptidase 2109440154694412116Rat
1306571Arsgarylsulfatase G109441226194551224Rat
735117Slc16a6solute carrier family 16, member 6109442437794447482Rat
1307754Wipi1WD repeat domain, phosphoinositide interacting 1109454294694580174Rat
6488368LOC100912202uncharacterized LOC100912202109461743494621315Rat
3391Prkar1aprotein kinase cAMP-dependent type I regulatory subunit alpha109462104294639534Rat
1306364Fam20aFAM20A, golgi associated secretory pathway pseudokinase109463883694697814Rat
15595781700012B07RklRIKEN cDNA 1700012B07 gene like109477147194804839Rat
7651542Rpl23a-ps1ribosomal protein L23a, pseudogene 1109491637594916960Rat
1307069Abca8ATP binding cassette subfamily A member 8109491752094991199Rat
1307333Abca8aATP-binding cassette, subfamily A (ABC1), member 8a109500233495072315Rat
1305931Abca9ATP binding cassette subfamily A member 9109507761595137751Rat
1308998Abca6ATP binding cassette subfamily A member 6109514280595212087Rat
628661Abca5ATP binding cassette subfamily A member 5109524015995309195Rat
620666Map2k6mitogen-activated protein kinase kinase 6109537330495490406Rat
7693387LOC102551705uncharacterized LOC102551705109551345495528950Rat
11381410LOC108352228uncharacterized LOC108352228109576427695778029Rat
61824Kcnj16potassium inwardly-rectifying channel, subfamily J, member 16109599000996021356Rat
41147005LOC120095205uncharacterized LOC120095205109600747396018517Rat
40991355LOC120095206uncharacterized LOC120095206109605691996060698Rat
61968Kcnj2potassium inwardly-rectifying channel, subfamily J, member 2109606083496071397Rat
11396194LOC108352153uncharacterized LOC108352153109631197996366541Rat
11358786LOC108352154uncharacterized LOC108352154109636815996380190Rat
2323140Fcf1-ps2Fcf1 rRNA-processing protein, pseudogene 2109670907896709724Rat
1565086Ube2c-ps1ubiquitin-conjugating enzyme E2C, pseudogene 1109707829097079160Rat
41145218LOC120095207uncharacterized LOC120095207109717843497201392Rat
41357600LOC120095209uncharacterized LOC120095209109745199197464219Rat
7737388LOC102547123uncharacterized LOC102547123109763351897648796Rat
11422283LOC108352188high mobility group protein B3 pseudogene109765561197657071Rat
9136714LOC103693474uncharacterized LOC103693474109775472397756670Rat
620474Sox9SRY-box transcription factor 9109780648597811994Rat
7566917LOC102549521uncharacterized LOC102549521109801374198022561Rat
7611149LOC102549596uncharacterized LOC102549596109804971498085007Rat
7734651LOC102549836uncharacterized LOC102549836109807489798232243Rat
11366916LOC108352157uncharacterized LOC108352157109813640098152364Rat
9685629Mir297microRNA 297109821647998216544Rat
1311981Slc39a11solute carrier family 39, member 11109827595898697042Rat
41378255LOC120095210uncharacterized LOC120095210109839472598400326Rat
41106371Trnaa-ugc10transfer RNA alanine (anticodon UGC) 10109848991898489992Rat
3763Sstr2somatostatin receptor 2109866420498671370Rat
1304594Cog1component of oligomeric golgi complex 1109869548198708495Rat
1563409Vcf1VCP nuclear cofactor family member 1109870740498728486Rat
1359207Mtnap1mitochondrial nucleoid associated protein 1109872866198738693Rat
1306397Cpsf4lcleavage and polyadenylation specific factor 4-like109874181698756069Rat
1311567Cdc42ep4CDC42 effector protein 4109877261398797924Rat
1310397Sdk2sidekick cell adhesion molecule 2109882491699102590Rat
7689502LOC102547853uncharacterized LOC102547853109890697998941230Rat
7593118LOC102547687uncharacterized LOC102547687109906304999071550Rat
41006281LOC120095211uncharacterized LOC120095211109912871999139667Rat
7658394LOC102548022uncharacterized LOC102548022109923331399267271Rat
40948865LOC120095337uncharacterized LOC120095337109930475999312501Rat
41116026LOC120095212uncharacterized LOC120095212109937129899400738Rat
1305573Rpl38ribosomal protein L38109970133099705004Rat
1562969Ttyh2tweety family member 2109970906399753449Rat
1359602Dnai2dynein, axonemal, intermediate chain 2109975996699793379Rat
41400420LOC120095402small nucleolar RNA SNORA67109977276499772893Rat
1559936Kif19kinesin family member 19109980018599826546Rat
1563331Btbd17BTB domain containing 17109982613299832624Rat
1559926Gpr142G protein-coupled receptor 142109984006999843410Rat
1311408Gprc5cG protein-coupled receptor, class C, group 5, member C109988690099908928Rat
1583719Cd300aCd300a molecule109992980199942674Rat
1583718Cd300lbCD300 molecule-like family member b109996480199974790Rat
1559458CD300c-ps1CD300c molecule, pseudogene 110100004943100010110Rat
1562156Cd300ldl1Cd300 molecule-like family member D like 110100056712100078276Rat
2319739Cd300ldCd300 molecule-like family member D10100082957100115853Rat
6502330Cd300cl1CD300c molecule like 110100117788100126304Rat
1562667Cd300c2l1CD300C molecule 2 like 110100136144100140607Rat
41394609Slc25a5-ps13solute carrier family 25 member 5, pseudogene 1310100153609100154533Rat
1592119Igsf7immunoglobulin superfamily, member 710100153767100161589Rat
1564512Slc25a5-ps5solute carrier family 25 member 5, pseudogene 510100174797100175737Rat
1559482Igsf7l1immunoglobulin superfamily, member 7 like 110100174955100182713Rat
9443602Cd300ld-ps1Cd300 molecule-like family member D, pseudogene 110100188157100192555Rat
1563057CD300c-ps2CD300c molecule, pseudogene 210100198793100203759Rat
1565161Cd300cCD300c molecule10100228254100233207Rat
1561778Cd300c2CD300C molecule 210100253312100258553Rat
1586269Slc25a5-ps8solute carrier family 25 member 5, pseudogene 810100260249100261714Rat
1305426Cd300leCd300 molecule-like family member E10100271076100280400Rat
1585137Cd300eCd300e molecule10100289729100309996Rat
1586145Rpl6-ps9ribosomal protein L6, pseudogene 910100299625100302548Rat
9228340LOC103693477uncharacterized LOC10369347710100312410100321685Rat
41341585Trnaa-agc73transfer RNA alanine (anticodon AGC) 7310100332749100332832Rat
2319982Rab37RAB37, member RAS oncogene family10100334639100401974Rat
1309733Cd300lfCd300 molecule-like family member F10100359942100376130Rat
708538Nherf1NHERF family PDZ scaffold protein 110100403189100420290Rat
1307096Nat9N-acetyltransferase 910100422326100427510Rat
1307953Tmem104transmembrane protein 10410100427244100485890Rat
2739Grin2cglutamate ionotropic receptor NMDA type subunit 2C10100488430100507083Rat
621648Fdxrferredoxin reductase10100507863100516649Rat
1311950Fads6fatty acid desaturase 610100522981100538181Rat
1304551Ush1gUSH1 protein network component sans10100559721100563590Rat
1304830Otop2otopetrin 210100564727100574298Rat
1306663Otop3otopetrin 310100577346100588729Rat
1311422Hid1HID1 domain containing10100589555100610050Rat
1306881Cdr2lcerebellar degeneration-related protein 2-like10100625150100638669Rat
1307942Mrpl58mitochondrial ribosomal protein L5810100646374100652871Rat
11407049Trnar-ccu7transfer RNA arginine (anticodon CCU) 710100654877100654949Rat
11507218Trnar-ccu8transfer RNA arginine (anticodon CCU) 810100655228100655300Rat
11494208Trnar-ucg2transfer RNA arginine (anticodon UCG) 210100655695100655767Rat
620083Atp5pdATP synthase peripheral stalk subunit d10100657700100662960Rat
1566063Kctd2potassium channel tetramerization domain containing 210100663013100674756Rat
1311352Trim80tripartite motif protein 8010100682826100691152Rat
1582896Slc16a5solute carrier family 16 member 510100707434100721338Rat
1310043Armc7armadillo repeat containing 710100723080100739636Rat
2321875Nt5c5', 3'-nucleotidase, cytosolic10100739591100742276Rat
1359325Jpt1Jupiter microtubule associated homolog 110100744468100762504Rat
41132968LOC120093044small nucleolar RNA SNORA1910100770794100770925Rat
621761Sumo2small ubiquitin-like modifier 210100771941100784503Rat
40961797Ftl1-ps10ferritin light chain 1, pseudogene 1010100802981100803581Rat
1311942Nup85nucleoporin 8510100806482100825029Rat
1309553Gga3golgi associated, gamma adaptin ear containing, ARF binding protein 310100825427100843422Rat
41126172LOC120095367U6 spliceosomal RNA10100841109100841219Rat
1309164Mrps7mitochondrial ribosomal protein S710100843691100846838Rat
1309685Mif4gdMIF4G domain containing10100847168100852166Rat
1359554Slc25a19solute carrier family 25 member 1910100853554100867517Rat
619758Grb2growth factor receptor bound protein 210100881404100949193Rat
41119811LOC120095390small nucleolar RNA SNORA7010100964850100964982Rat
41200060LOC120095355U6 spliceosomal RNA10100984804100984906Rat
7685108Tmem94transmembrane protein 9410100991523101027046Rat
41070056Dppa2l-ps3developmental pluripotency-associated 2 like, pseudogene 310100994741100999028Rat
4888579Mir3577microRNA 357710101023869101023981Rat
1309738Caskin2cask-interacting protein 210101027196101041429Rat
1597379Tsen54tRNA splicing endonuclease subunit 5410101041607101050088Rat
1560307Llgl2LLGL scribble cell polarity complex component 210101050978101086527Rat
1597365Myo15bmyosin XVB10101088734101126159Rat
1310823Recql5RecQ like helicase 510101126544101165739Rat
1586374Smim5small integral membrane protein 510101134033101139814Rat
7720946Smim6small integral membrane protein 610101144577101147160Rat
1565537Sap30bpSAP30 binding protein10101165777101198503Rat
2321678Rps18l1ribosomal protein S18-like 110101204519101205067Rat
2928Itgb4integrin subunit beta 410101206657101243012Rat
1305375Galk1galactokinase 110101243146101247323Rat
621095H3f3bH3.3 histone B10101256484101258716Rat
1309224Unkunk zinc finger10101265732101295950Rat
628593Unc13dunc-13 homolog D10101296755101311513Rat
620032Wbp2WW domain binding protein 210101312476101320775Rat
7503996LOC102552044uncharacterized LOC10255204410101320917101341100Rat
1597317Trim47tripartite motif-containing 4710101337573101342044Rat
40942668LOC120093105uncharacterized LOC12009310510101343364101364468Rat
1559497Trim65tripartite motif-containing 6510101357937101364036Rat
1311180Mrpl38mitochondrial ribosomal protein L3810101365353101372159Rat
1310662Fbf1Fas binding factor 110101375769101401624Rat
619757Acox1acyl-CoA oxidase 110101406197101431252Rat
1311078Ten1TEN1 subunit of CST complex10101431328101455105Rat
1306141Evplenvoplakin10101458227101474778Rat
1305376Srp68signal recognition particle 6810101481213101508035Rat
41131801LOC120095213uncharacterized LOC12009521310101490110101491580Rat
2657Galr2galanin receptor 210101513689101517176Rat
620236Exoc7exocyst complex component 710101521630101540425Rat
621764Foxj1forkhead box J110101566299101570370Rat
11506243LOC108352160uncharacterized LOC10835216010101571155101586495Rat
1591154Rnf157ring finger protein 15710101571972101639874Rat
1311298Ubald2UBA-like domain containing 210101662507101667089Rat
1562974Qrich2glutamine rich 210101669240101697643Rat
620206Prpsap1phosphoribosyl pyrophosphate synthetase-associated protein 110101701094101750753Rat
10412358Khps1asphk1a antisense transcript10101758466101759755Rat
620048Sphk1sphingosine kinase 110101758567101764240Rat
1310297Ube2oubiquitin-conjugating enzyme E2O10101765572101812736Rat
41380343LOC120095357U6 spliceosomal RNA10101808139101808246Rat
1559519Rpl14-ps1ribosomal protein L14, pseudogene 110101823987101824649Rat
2006Aanataralkylamine N-acetyltransferase10101827072101831805Rat
1309699Rhbdf2rhomboid 5 homolog 210101833157101860283Rat
69415Cygbcytoglobin10101877675101887442Rat
6488422Prcdphotoreceptor disc component10101887192101907647Rat
41259286Snord1csmall nucleolar RNA, C/D box 1C10101905797101905872Rat
41268363LOC120095397small nucleolar RNA R3810101907729101907804Rat
11391163LOC108352161uncharacterized LOC10835216110101907879101909302Rat
1560747St6galnac2ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 210101910220101928412Rat
1562048St6galnac1ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 110101972656101983053Rat
1594666Mxra7matrix remodeling associated 710102003034102031428Rat
1305395Jmjd6jumonji domain containing 6, arginine demethylase and lysine hydroxylase10102041131102047182Rat
1306284Mettl23methyltransferase 23, arginine10102047090102053379Rat
1359422Srsf2serine and arginine rich splicing factor 210102052158102055365Rat
1307394Mfsd11major facilitator superfamily domain containing 1110102055516102075064Rat
1305188Mgat5balpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B10102120757102190235Rat
6489294LOC100912002uncharacterized LOC10091200210102275964102278092Rat
41249041Scarna16small Cajal body-specific RNA 1610102276365102276548Rat
1563123Sec14l1SEC14-like lipid binding 110102319920102367070Rat
40973997Rpl12-ps9ribosomal protein L12, pseudogene 910102335984102342705Rat
7606875LOC102547461uncharacterized LOC10254746110102365521102371047Rat
708523Septin9septin 910102409798102579056Rat
40962635LOC120095338uncharacterized LOC12009533810102679056102679709Rat
41339413LOC120095215uncharacterized LOC12009521510102700854102711178Rat
41047789LOC120095216uncharacterized LOC12009521610102709185102716649Rat
40962029LOC120095218uncharacterized LOC12009521810102722060102756134Rat
41374005LOC120095217uncharacterized LOC12009521710102722625102723996Rat
7555371LOC102546977uncharacterized LOC10254697710102767337102772610Rat
6487731LOC100912319uncharacterized LOC10091231910102797707102845427Rat
1310027Tnrc6ctrinucleotide repeat containing adaptor 6C10102908958102979543Rat
1591146Tmc6transmembrane channel like 610102982059102999509Rat
1591150Tmc8transmembrane channel-like 810103000038103010601Rat
1591144C10h17orf99smilar to human chromosome 17 open reading frame 9910103015371103027407Rat
41212192LOC120095354U6 spliceosomal RNA10103024725103024828Rat
621334Syngr2synaptogyrin 210103029903103034473Rat
621014Tk1thymidine kinase 110103034755103046125Rat
1591143Afmidarylformamidase10103046129103061718Rat
7539496LOC102548046uncharacterized LOC10254804610103055865103057531Rat
70499Birc5baculoviral IAP repeat-containing 510103072530103081382Rat
1591141Tmem235transmembrane protein 23510103081716103092187Rat
1591140Tha1threonine aldolase 110103094681103100169Rat
41243579LOC120095219uncharacterized LOC12009521910103113533103115901Rat
41242416LOC120095220uncharacterized LOC12009522010103115944103119116Rat
41366572LOC120095340uncharacterized LOC12009534010103119236103123667Rat
621087Socs3suppressor of cytokine signaling 310103193909103197322Rat
1305052Pgs1phosphatidylglycerophosphate synthase 110103214635103250254Rat
1563805Dnah17dynein, axonemal, heavy chain 1710103244144103364953Rat
41163197LOC120095221uncharacterized LOC12009522110103262366103264333Rat
620397Cyth1cytohesin 110103402727103485826Rat
1309937Usp36ubiquitin specific peptidase 3610103497349103528877Rat
61312Timp2TIMP metallopeptidase inhibitor 210103541199103590611Rat
1597046Cep295nlCEP295 N-terminal like10103562190103581183Rat
620837Lgals3bpgalectin 3 binding protein10103619912103629251Rat
628743Cant1calcium activated nucleotidase 110103637079103650240Rat
7683659LOC102548791uncharacterized LOC10254879110103655144103658176Rat
1359204C1qtnf1C1q and TNF related 110103660319103681662Rat
1310868Engaseendo-beta-N-acetylglucosaminidase10103707169103719833Rat
1560070Rbfox3RNA binding fox-1 homolog 310103720355104157277Rat
1359324Enpp7ectonucleotide pyrophosphatase/phosphodiesterase 710104242169104247185Rat
1588561Cbx2chromobox 210104278517104287384Rat
1565375Cbx8chromobox 810104294518104296956Rat
1587243Cbx4chromobox 410104337140104343210Rat
9098104LOC103693490uncharacterized LOC10369349010104344069104350876Rat
41356219LOC120095222uncharacterized LOC12009522210104364630104367584Rat
7736470LOC102551272uncharacterized LOC10255127210104375682104383352Rat
1588560Tbc1d16TBC1 domain family, member 1610104400963104486698Rat
1592118Ccdc40coiled-coil domain 40 molecular ruler complex subunit10104486748104527284Rat
735227Gaaalpha glucosidase10104529673104546836Rat
1591139Eif4a3eukaryotic translation initiation factor 4A310104549038104559032Rat
11501107LOC108352165uncharacterized LOC10835216510104559106104560426Rat
1591135Card14caspase recruitment domain family, member 1410104572059104601606Rat
1591134SgshN-sulfoglucosamine sulfohydrolase10104596810104613510Rat
1306178Slc26a11solute carrier family 26 member 1110104613498104635873Rat
1308168Rnf213ring finger protein 21310104656329104755669Rat
41326722LOC120095223uncharacterized LOC12009522310104749083104760333Rat
1562414Endovendonuclease V10104760059104777732Rat
9101501LOC103693491uncharacterized LOC10369349110104796936104807731Rat
628894Nptx1neuronal pentraxin 110104811107104820358Rat
1306329Polr2h-ps1polymerase (RNA) II (DNA directed) polypeptide H, pseudogene 110104854977104856390Rat
1311784Rptorregulatory associated protein of MTOR, complex 110104878487105176986Rat
1565325Chmp6charged multivesicular body protein 610105191972105197642Rat
7580047LOC102555825uncharacterized LOC10255582510105213139105222921Rat
619814Baiap2BAR/IMD domain containing adaptor protein 210105223065105290130Rat
1590980Aatkapoptosis-associated tyrosine kinase10105290752105327219Rat
4888597Mir3065microRNA 306510105297906105298008Rat
2325616Mir338microRNA 33810105297923105297988Rat
1307745Cep131centrosomal protein 13110105346015105370380Rat
4888570Mir3594microRNA 359410105347412105347476Rat
4888602Mir3562microRNA 356210105349519105349630Rat
1307410TepsinTEPSIN, adaptor related protein complex 4 accessory protein10105373939105381310Rat
1590963Ndufaf8NADH:ubiquinone oxidoreductase complex assembly factor 810105381491105383643Rat
1306356Slc38a10solute carrier family 38, member 1010105386836105436636Rat
6488876LOC100912167uncharacterized LOC10091216710105474128105476208Rat
1306500Bahcc1BAH domain and coiled-coil containing 110105526309105583320Rat
41267611LOC120095309uncharacterized LOC12009530910105573791105575083Rat
7661130LOC102546528uncharacterized LOC10254652810105606492105608060Rat
1304556Actg1actin, gamma 110105619738105622587Rat
41246698LOC120095311uncharacterized LOC12009531110105623021105624432Rat
1308941Fscn2fascin actin-bundling protein 2, retinal10105634783105641322Rat
1306926Faap100FA core complex associated protein 10010105641677105653809Rat
620794Nploc4NPL4 homolog, ubiquitin recognition factor10105654395105709958Rat
1590062Tspan10tetraspanin 1010105715803105721503Rat
1591130Pde6gphosphodiesterase 6G10105721502105726150Rat
1590060Oxld1oxidoreductase-like domain containing 110105729285105731278Rat
1591129Ccdc137coiled-coil domain containing 13710105730776105737158Rat
1590059Arl16ADP-ribosylation factor like GTPase 1610105737455105739631Rat
69225Hgshepatocyte growth factor-regulated tyrosine kinase substrate10105739617105757838Rat
1588559Mrpl12mitochondrial ribosomal protein L1210105758410105762913Rat
621430Slc25a10solute carrier family 25 member 1010105765598105775159Rat
9460242LOC103693493uncharacterized LOC10369349310105805507105809362Rat
2669Gcgrglucagon receptor10105808474105816641Rat
1311925Mcrip1MAPK regulated co-repressor interacting protein 110105820656105828146Rat
11508601Dpagt1l1dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 like 110105826733105828421Rat
1308861Ppp1r27protein phosphatase 1, regulatory subunit 2710105828364105829533Rat
3244P4hbprolyl 4-hydroxylase subunit beta10105836972105848583Rat
11491549LOC108352167H/ACA ribonucleoprotein complex subunit 3 pseudogene10105850897105854377Rat
1359547ArhgdiaRho GDP dissociation inhibitor alpha10105854526105858020Rat
1594679AlyrefAly/REF export factor10105871424105875076Rat
1561880Anapc11anaphase promoting complex subunit 1110105875209105886307Rat
708513Npbneuropeptide B10105883992105887689Rat
619970Pcyt2phosphate cytidylyltransferase 2, ethanolamine10105888769105896182Rat
1305876Sirt7sirtuin 710105896476105903301Rat
619953MafgMAF bZIP transcription factor G10105903307105911808Rat
1307863Pycr1pyrroline-5-carboxylate reductase 110105917732105922658Rat
1311499Myadml2myeloid-associated differentiation marker-like 210105922557105927867Rat
1307119NotumNOTUM, palmitoleoyl-protein carboxylesterase10105933245105940327Rat
1588666Aspscr1ASPSCR1 tether for SLC2A4, UBX domain containing10105952215105990059Rat
1590057Cenpxcentromere protein X10105991469105994310Rat
1590053Lrrc45leucine rich repeat containing 4510105994468106002425Rat
9182840LOC10369349460S ribosomal protein L36a-like10105995637105996546Rat
1590052Rac3Rac family small GTPase 310106002808106005243Rat
620031Dcxrdicarbonyl and L-xylulose reductase10106006404106008293Rat
1590051Cbr2carbonyl reductase 210106008535106012838Rat
41007127Trnag-acc4transfer RNA glycine (anticodon ACC) 410106022503106022577Rat
41310477Rpl37a-ps16ribosomal protein L37A, pseudogene 1610106029460106029965Rat
1590050Cbr2l1carbonyl reductase 2 like 110106033250106036852Rat
621322RfngRFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase10106047221106050331Rat
621532Gps1G protein pathway suppressor 110106050323106055407Rat
708389Dus1ldihydrouridine synthase 1-like10106055519106062656Rat
41377729LOC120095225uncharacterized LOC12009522510106065523106068287Rat
620665Fasnfatty acid synthase10106072093106090259Rat
1590047Ccdc57coiled-coil domain containing 5710106092784106196405Rat
2321647Dpm3-ps2dolichyl-phosphate mannosyltransferase subunit 3, regulatory, pseudogene 210106205676106206326Rat
620603Slc16a3solute carrier family 16 member 310106212679106222564Rat
71031Csnk1dcasein kinase 1, delta10106221992106256620Rat
1310015Cd7Cd7 molecule10106304046106306963Rat
11446826LOC10835223060S ribosomal protein L17 pseudogene10106323320106323870Rat
735132Sectm1bsecreted and transmembrane 1B10106324070106333779Rat
1305973Sectm1asecreted and transmembrane 1A10106337623106348656Rat
1588608Tex19.2testis expressed gene 19.210106379757106382344Rat
1566280Tex19.1testis expressed 19.110106420245106422452Rat
41025532LOC120095483U2 spliceosomal RNA10106426920106427023Rat
621884Uts2rurotensin 2 receptor10106438092106439252Rat
1305007Ogfod32-oxoglutarate and iron-dependent oxygenase domain containing 310106452334106480632Rat
2302323Hexdhexosaminidase D10106479781106498799Rat
40971048LOC120095457small nucleolar RNA SNORA2610106482582106482700Rat
1562022Cybc1cytochrome b-245 chaperone 110106498730106505549Rat
1587449Pgam1-ps1phosphoglycerate mutase 1, pseudogene 110106511729106512477Rat
1310894Narfnuclear prelamin A recognition factor10106519508106537494Rat
1305408Foxk2forkhead box K210106542643106592569Rat
1305141Wdr45bWD repeat domain 45B10106597558106629488Rat
1305663Rab40bRab40b, member RAS oncogene family10106631514106659090Rat
1304570Fn3krpfructosamine-3-kinase-related protein10106688413106697137Rat
1559983Fn3kfructosamine 3 kinase10106700670106715903Rat
2320148Tbcdtubulin folding cofactor D10106717340106874126Rat
1590044Znf750zinc finger protein 75010106772162106781186Rat
1359497B3gntl1UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 110106870237106933723Rat
1359271Metrnlmeteorin-like, glial cell differentiation regulator10106963880106977875Rat
1584945Rpl23a-ps13ribosomal protein L23a, pseudogene 1310107077994107081835Rat
1590039Ptchd3patched domain containing 310107097551107108575Rat
41284199LOC120095434small nucleolar RNA SNORA4810107103489107103632Rat
7594162Zfp950l6zinc finger protein 950 like 610107115705107136643Rat
7527378Zfp950l5zinc finger protein 950 like 510107141071107166722Rat
41179444LOC120095349U6 spliceosomal RNA10107167697107167803Rat
7686500Zfp950l11zinc finger protein 950 like 1110107173064107184585Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10627D10Mcw116610105813290105813458Ratregion
10926D10Wox21108913584589135975Ratregion
11137D10Wox17153108705512187055282Ratregion
11169D10Mgh21150108853913988539279Ratregion
34100D10Mgh3144109560033495600487Ratregion
34202D10Mgh1613410102359683102359817Ratregion
34485D10Mgh4116109236936492369470Ratregion
11308D10Wox20107108730761787307728Ratregion
36019D10Rat18156108709561687095772Ratregion
36283D10Rat15170109223832792238497Ratregion
36297D10Rat52149109258511992585263Ratregion
35254D10Rat217810107057622107057807Ratregion
35256D10Rat11190109612091196121100Ratregion
35364D10Rat614610101435864101436010Ratregion
35386D10Rat8157109940697199407128Ratregion
37118D10Rat205141108825022088250361Ratregion
37150D10Rat204216109040439790404618Ratregion
36494D10Rat517210103349037103349209Ratregion
36624D10Rat13306109269895992699242Ratregion
34779D10Rat53128109318476493184904Ratregion
34896D10Rat17172109062743990627625Ratregion
34941D10Rat717310101012337101012510Ratregion
35573D10Rat10127109580377395803900Ratregion
35627D10Rat12170109472486094725019Ratregion
35665D10Rat415610102134116102134272Ratregion
35705D10Rat14172109273262192732793Ratregion
39928D10Rat189200109322381693224011Ratregion
40488D10Rat201162109827943498279596Ratregion
40572D10Rat203138109210872292108854Ratregion
40628D10Rat142225108820760088207815Ratregion
38514D10Rat10510010105185150105185250Ratregion
38542D10Rat132234109670304396703281Ratregion
38620D10Rat10921810104573352104573570Ratregion
40070D10Rat188130109672505096725180Ratregion
38844D10Rat101206109821135998211570Ratregion
39136D10Rat74212109450556294505776Ratregion
39140D10Rat84145108853914488539279Ratregion
39188D10Rat9721110107148227107148444Ratregion
39292D10Rat10820010104926165104926367Ratregion
39302D10Rat120249108813239288132643Ratregion
39306D10Rat122206108814941588149627Ratregion
39358D10Rat88211109802573698025938Ratregion
39410D10Rat140211108953494589535132Ratregion
39576D10Rat18724710106428724106428971Ratregion
41930D10Arb11312108853904188539353Ratregion
41932D10Arb13270108730758487307853Ratregion
42259D10Rat54326109167613091676468Ratregion
41382D10Rat136164109789809697898372Ratregion
41382D10Rat136164109789820697898372Ratregion
42934D10Rat233230109466470594664919Ratregion
42935D10Rat232200109662147796621674Ratregion
42936D10Rat231240109855410198554338Ratregion
42937D10Rat229210109888103598881244Ratregion
42938D10Rat228118109902101699021131Ratregion
42939D10Rat268158109952612899526290Ratregion
42940D10Rat227233109938417899384416Ratregion
42941D10Rat22624210106808971106809211Ratregion
42373D10Rat267138109677281196772940Ratregion
40824D10Rat138223109377473393774956Ratregion
41042D10Rat13420710103784905103785112Ratregion
41584D10Rat13515510104670657104670812Ratregion
41860D10Rat230208109833495198335153Ratregion
44816D10Got132216108859446288594678Ratregion
44817D10Got140183109035578190355964Ratregion
44819D10Got135222108925837389258594Ratregion
44821D10Got141160109062750790627669Ratregion
44822D10Got139166109048805390488219Ratregion
44824D10Got142117109216311792163234Ratregion
44825D10Got144188109220606292206252Ratregion
44826D10Got143239109223825792238496Ratregion
44827D10Got146161109246860792468768Ratregion
44829D10Got147188109377675893776944Ratregion
44830D10Got145155109331690693317061Ratregion
44832D10Got148268109405827594058543Ratregion
44833D10Got149206109477502594775230Ratregion
44835D10Got150282109481267594812957Ratregion
44836D10Got154107109701014797010254Ratregion
44837D10Got152142109773056397730705Ratregion
44837D10Got152142109773056397730821Ratregion
44838D10Got153111109645978696459897Ratregion
44839D10Wox7155109895262698952741Ratregion
44840D10Got156154109924882999248983Ratregion
44841D10Got15820610100308669100308873Ratregion
629589D10Hmgc2183108705510887055287Ratregion
59969D10Got133269108911600189116268Ratregion
59970D10Got137141109026279290262933Ratregion
59972D10Got151288109484566794845954Ratregion
59973D10Got15517110100299840100300011Ratregion
59974D10Got15713010100604759100604889Ratregion
59976D10Got163112109397731093977416Ratregion
61275D10Arb2215010104060133104060283Ratregion
66415D10Mco44249109792435797924612Ratregion
66502D10Mco69230109545398295454218Ratregion
66520D10Mco70255109683600696836268Ratregion
66521D10Mco71263109908049599080758Ratregion
66524D10Mco74400109220852692209113Ratregion
66563D10Mco6187109800301998003205Ratregion
66565D10Mco7314109474110494741420Ratregion
66715D10Mco15183109399574993995963Ratregion
67318D10Arb12109012861890128836Ratregion
67319D10Arb1574108705506087055320Ratregion
1578868D10Chm159239109285351892853761Ratregion
1578819D10Chm88248109437176594372013Ratregion
1578836D10Chm158250109219147692191728Ratregion
1578851D10Chm47241109505338095053621Ratregion
1578855D10Chm236250108916307689163326Ratregion
1578856D10Chm233290109281103592811329Ratregion
1630302D10Got134175108989096889891143Ratregion
1630499D10Wox5227410101827515101827789Ratregion
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5067434AU047748130109730787097308000Ratregion
5067556AU04767415810102676230102676388Ratregion
5067794AU04753229710102019712102020006Ratregion
5067794AU04753229710102019712102020095Ratregion
5067810AU04752318010104071393104071568Ratregion
5068302AU047226174109971240499712880Ratregion
5069488AU046465153109230605892306206Ratregion
5070159RH9450695109463755594637650Ratregion
5070159RH9450695109463755594637650Ratregion
5070257RH9456319210100488555100488747Ratregion
5070267RH94568152109124696191247113Ratregion
5069272AU046606151109233623692336387Ratregion
5060334AW531488187108904392389044111Ratregion
5060336AW531493167109401553794015704Ratregion
5062080BI29490595109011349890113593Ratregion
5065190BE121110201109033461590334816Ratregion
5060578BE110438183109130561891305801Ratregion
5063934BE120277191108923913589239326Ratregion
5064024AA956078148109087320490873352Ratregion
5065848AI045565184108940339489403578Ratregion
5060090AI072332206109263809392638299Ratregion
5063542BE107769185109268522792685412Ratregion
5065300AI535109214109524023095240444Ratregion
5060746BF389074120109365683593656955Ratregion
5062688BF403857161109014257390142734Ratregion
5062818AW528310100109437383994373939Ratregion
5065978BE116376168109444215294442320Ratregion
5066060BE116687156109806103098061186Ratregion
5061084AW532191221108915130489152011Ratregion
5061136AW526267210109212220292122412Ratregion
5062902BI295468187109110820391108390Ratregion
5064582BF399386151109076378890763939Ratregion
5066218PMC102575P1570109172519791725767Ratregion
5066244PMC125376P2218108785291687853134Ratregion
5066304PMC148819P213710103195944103196081Ratregion
5061376BE099716155109127761291277767Ratregion
5061448BE099833164109199752891997692Ratregion
5061528BF396623154109026082990260983Ratregion
5084124AA849209106108711779187117897Ratregion
5086923BQ191940203109481609094816297Ratregion
5082131BF409851155109090761990907774Ratregion
5082181BI280353185109132692791327112Ratregion
5082253BE119038180109420057494200754Ratregion
5086123AA859237211108780501687805227Ratregion
5087155BE107781152109496034294960494Ratregion
5087291BQ208647168109216635992166529Ratregion
5087783D16Bwg0193e10410106599465106599569Ratregion
5087903Grin2c17910100488917100489096Ratregion
5087472PMC199556P19010101412196101412286Ratregion
5087504PMC21059P263510101406415101407050Ratregion
5089821AU049383192109052953990529731Ratregion
5088116Sox9207109780926897809475Ratregion
5083331BG374822130108715162387151753Ratregion
5090823AU049984154109031161090311759Ratregion
5088887AU04882915410105198985105199139Ratregion
5089615AU049260123109909855599098677Ratregion
5090357AU049703128109414185294141981Ratregion
5084560AI177621212109130871791308929Ratregion
5087580PMC34415P1297109780679897807095Ratregion
5081913BE118743151109080909090809241Ratregion
5087993Map2k6138109548804395488181Ratregion
5082139BF409906207108857976688579973Ratregion
5085070Foxj126110101567503101567764Ratregion
5090735AU049932204108882756888827774Ratregion
5080754RH14176218110104247008104247191Ratregion
5090491AU049782294109405827594058569Ratregion
5088659AU04870017610100299865100300041Ratregion
5081120RH141976209109600752096007729Ratregion
5090013AU049498216109774712497747338Ratregion
5085946BM383765164108853808088538244Ratregion
5080780RH14177719910104404696104404895Ratregion
5080822RH14180220210105762113105762315Ratregion
5080844RH14181519610100422577100423237Ratregion
5080992RH14190121510106452450106452665Ratregion
5081184RH142013216109037542690375642Ratregion
5081262RH142059220109449599194496211Ratregion
5081282RH142070200109871971098719910Ratregion
5081318RH142091180109110946591109645Ratregion
5084746AI22853024910103835819103836072Ratregion
5084842AI171597111108765430187654412Ratregion
5085052Ppy191108705526787055458Ratregion
5086423BE107018160108784968887849848Ratregion
5081561AA926148212109093095890931170Ratregion
5083703AI17993722910106379798106380027Ratregion
5086768BM386718150109462914294629292Ratregion
5086829BE114693150109456214294562292Ratregion
5085776BQ211419153109807496098075113Ratregion
5085870AA866270200109143679791436993Ratregion
5503039Fzd2657108756274187563398Ratregion
5503046Fzd2341108756291087563251Ratregion
5503180ksks3170108715034387150914Ratregion
5503136NSF-1181108877520788775861Ratregion
5503324UniSTS:2380450109117395791175400Ratregion
5503440UniSTS:46193153610106220184106220720Ratregion
5503718TLK2_8170902109024754190248443Ratregion
5503734FMNL1_8237387108814295388143341Ratregion
5503811UniSTS:471334890108863926788640158Ratregion
5503845Nmt1279108802231388022592Ratregion
5503885SSTR2404109866993598670339Ratregion
5503974Gcgr40710105815396105816285Ratregion
5504442PMC207565P28310106084121106084204Ratregion
5504270D17S1439E109108723928387240944Ratregion
5504959Pyy1049108706119387062242Ratregion
5505285Axin2105109389934693899451Ratregion
5505338Jmjd6140810102043461102044869Ratregion
5505642UniSTS:48789699310105926506105927499Ratregion
5505526D2S147115310103878082103879235Ratregion
5505788UniSTS:49318799310105926506105927499Ratregion
5506019Crhr1257108907640189076830Ratregion
5506214Cbr239110106011680106012071Ratregion
5506250G35712263108916762189167884Ratregion
5506433UniSTS:479265010102054314102055148Ratregion
5506773G4526625010106014679106014929Ratregion
5506741G45081144109406247094062614Ratregion
5506857G4659627910104759277104759556Ratregion
5507049UniSTS:22418015810101256889101257047Ratregion
5507149UniSTS:22485771109124740991247480Ratregion
5507071UniSTS:224328192109548768495487876Ratregion
5507111UniSTS:2245860108923340389233568Ratregion
5506971fc37g07.x10109827953898280010Ratregion
5499683G7311027910105898276105898878Ratregion
5500107UniSTS:23679628110105655698105655979Ratregion
5500099UniSTS:236750104108780580987805913Ratregion
5500103UniSTS:23677925510101196123101196378Ratregion
5499625MARC_4113-4114:991938380:380109118776791188448Ratregion
5501986MARC_21859-21860:1027094458:1010105580478105580760Ratregion
5500109UniSTS:23679837010106061706106062076Ratregion
5500338GDB:196138470108871837788718847Ratregion
5502339RH124538432109108600891086440Ratregion
5502509RH1251539010105285694105285784Ratregion
5500693RH47409139109024829890248437Ratregion
5500863AFM196xf61162109378183893783000Ratregion
5500839D17S1990278109172468291724960Ratregion
5501221PMC156147P1011110106075242106075353Ratregion
5501231PMC16008P1387108756320587563592Ratregion
5501245PMC165604P1010103007528103008366Ratregion
5501291D18S1095141310106543586106544999Ratregion
5501393Mif403109419212294192525Ratregion
5504736PMC86057P126810103036286103036632Ratregion
5504793UniSTS:27563574410102052885102053630Ratregion
5502018MARC_23993-23994:1029524382:1147108780670487807500Ratregion
5506212Cacng41461109268658992688050Ratregion
5502196MARC_8253-8254:996688461:1385108724300387243388Ratregion
Position Markers

Flank 1: (D10Wox17)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21087,055,121 - 87,055,282 (+)MAPPER
Rnor_6.01090,041,957 - 90,042,115NCBI
Rnor_5.01089,831,438 - 89,831,596UniSTS
RGSC_v3.41091,168,332 - 91,168,491RGD
RGSC_v3.41091,168,333 - 91,168,491UniSTS
RGSC_v3.11091,182,702 - 91,182,861RGD
Celera1085,772,728 - 85,772,886UniSTS
RH 3.4 Map10887.4UniSTS
RH 3.4 Map10887.4RGD
RH 2.0 Map10991.0RGD
Cytogenetic Map10q32.1UniSTS
Flank 2: (D10Mgh1)
Rat AssemblyChrPosition (strand)Source
Celera10102,748,696 - 102,748,839UniSTS
RH 2.0 Map101407.7RGD
Cytogenetic Map10 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549846Scl47Serum cholesterol level QTL 473.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)105057470795574707Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063221094107211142Rat
631555Bp134Blood pressure QTL 1340.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)108051528791230079Rat
631558Bp137Blood pressure QTL 1370.013arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)109472486096836268Rat
1549831Bss6Bone structure and strength QTL 64lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)1057576521102576521Rat
70164Bw21Body weight QTL 214.360.00005body mass (VT:0001259)body weight (CMO:0000012)105379749498952626Rat
4889948Bss91Bone structure and strength QTL 914tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)108256485692369470Rat
70168Eae12Experimental allergic encephalomyelitis QTL 120.0009nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)1092238497101012337Rat
2300218Hpcl2Hepatic cholesterol level QTL 2liver cholesterol amount (VT:0010498)liver cholesterol level (CMO:0001597)104502965095600334Rat
8694173Bw149Body weight QTL 1494.380.001body mass (VT:0001259)body weight gain (CMO:0000420)104444169989441699Rat
70171Cari1Carrageenan-induced inflammation QTL 14.90.0005hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)1053797385107211142Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101448701189062041Rat
70188BpQTLcluster1Blood pressure QTL cluster 14.864arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)14232313287323132Rat
2300172Bmd57Bone mineral density QTL 579.80.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1069738412107211142Rat
70193Mcs7Mammary carcinoma susceptibility QTL 72.38mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1072224939107211142Rat
1357344Bp249Blood pressure QTL 2490.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)106674365598003205Rat
70198BpQTLcluster9Blood pressure QTL cluster 92.94arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)104232313287323132Rat
724530Bp149Blood pressure QTL 1490.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1090627439107211142Rat
6893357Bw102Body weight QTL 1020.50.36body mass (VT:0001259)body weight (CMO:0000012)1080515287101325465Rat
2303589Bw87Body weight QTL 872body mass (VT:0001259)body weight (CMO:0000012)1081285008107211142Rat
724556Pur2Proteinuria QTL 25.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)102242750090627625Rat
1358915Stresp7Stress response QTL 73.52blood norepinephrine amount (VT:0005663)plasma norepinephrine level (CMO:0001010)107889965587307728Rat
1331791Cm31Cardiac mass QTL 313.84606heart mass (VT:0007028)heart wet weight (CMO:0000069)1029299504107211142Rat
6893366Bw106Body weight QTL 1060.30.47body mass (VT:0001259)body weight (CMO:0000012)1070199100107211142Rat
1576313Pia25Pristane induced arthritis QTL 25joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1096120911104060283Rat
1354608Cm33Cardiac mass QTL 332.8heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)105480929299809292Rat
1558643Cm44Cardiac mass QTL 444.80.0000368heart mass (VT:0007028)heart wet weight (CMO:0000069)106134527699703528Rat
1576307Cia28Collagen induced arthritis QTL 28joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1096120911104060283Rat
1558652Bw57Body weight QTL 574.20.0008body mass (VT:0001259)body weight (CMO:0000012)108932701790930437Rat
1576308Schws1Schwannoma susceptibility QTL 10.0041nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)1040035094102359817Rat
6893336Cm75Cardiac mass QTL 750.10.87heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)106134527699703528Rat
12880055Am11Aortic mass QTL 110.004aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)108400727295933025Rat
1600367Mcs15Mammary carcinoma susceptibility QTL 154.5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1085565469103884409Rat
1358188Ept9Estrogen-induced pituitary tumorigenesis QTL 93.9pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)107345313696120911Rat
1354641Bvd2Brain ventricular dilatation QTL 26.360.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)1093223816107057807Rat
1298069Bp168Blood pressure QTL 1685.5blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)102652195798003205Rat
61325Aia5Adjuvant induced arthritis QTL 50.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
1298078Stresp5Stress response QTL 52.990.00025blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1042045676104670812Rat
1579915Bp280Blood pressure QTL 2800.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1090404397107211142Rat
2298548Neuinf7Neuroinflammation QTL 73.4nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)1072224939107211142Rat
1302404Cia27Collagen induced arthritis QTL 272.60.0045joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)1076452683107211142Rat
1579919Bp281Blood pressure QTL 2810.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)107437208494965338Rat
1300107Rf18Renal function QTL 183.41urine output (VT:0003620)timed urine volume (CMO:0000260)107877551698279596Rat
2317754Glom25Glomerulus QTL 253.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)1082685200107211142Rat
1554317Bmd4Bone mineral density QTL 49.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)101981604299406971Rat
10450495Bp383Blood pressure QTL 3830.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)107624608594965338Rat
10450493Bp382Blood pressure QTL 3820.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1094759759107211142Rat
2313856Bp342Blood pressure QTL 3424.40.0001life span trait (VT:0005372)age at time of death (CMO:0001193)108730761796121100Rat
1578672Bmd16Bone mineral density QTL 166.2femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)1096703043107057807Rat
61354Pia10Pristane induced arthritis QTL 100.01joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
2292617Ept18Estrogen-induced pituitary tumorigenesis QTL 183.9pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)107345313696120911Rat
2293646Bss25Bone structure and strength QTL 2510.960.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1069738412107211142Rat
2313103Bss80Bone structure and strength QTL 8020.0001tibia strength trait (VT:1000284)tibia midshaft endosteal cross-sectional area (CMO:0001716)1062057807107057807Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
2313105Bss79Bone structure and strength QTL 791.80.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)1062057807107057807Rat
61363Oia3Oil induced arthritis QTL 30.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1087307617107211142Rat
9589030Epfw9Epididymal fat weight QTL 919.240.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)104444169989441699Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014487011107057807Rat
2306970Anxrr22Anxiety related response QTL 225.95fear/anxiety-related behavior trait (VT:1000241)number of periods of voluntary immobility (CMO:0001045)106134527698211570Rat
1300137Bp186Blood pressure QTL 1863.57arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1090627439107057807Rat
2293663Bss33Bone structure and strength QTL 339.340.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1069738412107211142Rat
1359017Hrtrt21Heart rate QTL 212.4heart pumping trait (VT:2000009)heart rate (CMO:0000002)105177294096772940Rat
1578663Bss18Bone structure and strength QTL 183.6femur width (VT:1000666)femoral neck width (CMO:0001695)1096703043107057807Rat
2312672Insul15Insulin level QTL 150.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1057134272102134272Rat
12880384Cm107Cardiac mass QTL 1070.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)90404397107211142Rat
12880385Cm108Cardiac mass QTL 1080.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)90404397107211142Rat
2317029Aia19Adjuvant induced arthritis QTL 192.98joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1066978955107211142Rat
12880396Am13Aortic mass QTL 130.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)1090404397107211142Rat
2306793Ean5Experimental allergic neuritis QTL 54.7nervous system integrity trait (VT:0010566)IFNG-secreting splenocyte count (CMO:0002122)107255241693995749Rat
12880398Kidm67Kidney mass QTL 670.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1090404397107211142Rat
2306792Ean4Experimental allergic neuritis QTL 44nervous system integrity trait (VT:0010566)IFNG-secreting splenocyte count (CMO:0002122)108402232193995963Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1051770177107211142Rat
2317039Aia6Adjuvant induced arthritis QTL 64.31joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)1066978955107211142Rat
12880395Cm109Cardiac mass QTL 1090.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)1090404397107211142Rat
61396Bp9Blood pressure QTL 94.80.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1068420376107211142Rat
634320Niddm49Non-insulin dependent diabetes mellitus QTL 494.41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1088539139107211142Rat
70364Bp72Blood pressure QTL 72arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)105112110096121100Rat
10450498Bp384Blood pressure QTL 3840.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1067750049107211142Rat
4889492Pancm2Pancreatic morphology QTL 23.2pancreatic beta cell morphology trait (VT:0005217)ratio of insulin-positive cell area to total area of splenic region of pancreas (CMO:0001814)1076748906107211142Rat
2293698Bss43Bone structure and strength QTL 435.330.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1059209888104209888Rat
631530Tls3T-lymphoma susceptibility QTL 300.0001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)105177461295600334Rat
631535Cm51Cardiac mass QTL 513heart mass (VT:0007028)calculated heart weight (CMO:0000073)105178628291669536Rat
631267Cia20Collagen induced arthritis QTL 203.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1023444813104060283Rat
631269Cia22Collagen induced arthritis QTL 228.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014487011104060283Rat
631270Cia23Collagen induced arthritis QTL 233.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1040035094104060283Rat
1581559Eae18Experimental allergic encephalomyelitis QTL 180.00002nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)10107057622107211142Rat
7411614Foco18Food consumption QTL 180.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)104444169989441699Rat
631547Bp87Blood pressure QTL 874.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)104736947092369470Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
2292438Bp311Blood pressure QTL 311arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1076246085107211142Rat
2312662Slep8Serum leptin concentration QTL 80.05blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1057134272102134272Rat
2301398Kidm38Kidney mass QTL 380.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)108400727295933025Rat
2292436Bp310Blood pressure QTL 310arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1094759759107211142Rat
631537Oia4Oil induced arthritis QTL 4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)107563188787055282Rat
631539Oia6Oil induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1097010147104670812Rat
631538Oia5Oil induced arthritis QTL 5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1087055121107211142Rat
61436Cia5Collagen induced arthritis QTL 54.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1091228102104060283Rat
1642980Bp300Blood pressure QTL 300arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1068383129107211142Rat
2312668Scl65Serum cholesterol level QTL 650.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1057134272102134272Rat
631542Bp82Blood pressure QTL 826.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)102652195798952741Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Oia5

RGD Curation Notes
Note Type Note Reference
qtl_disease congenic strain confers susceptibility to induction of arthritis by adjuvant oil squalene 62404
qtl_disease onset of arthritis is accompanied by T cell infiltration into joints and increased inflammation 62404
qtl_gene 122 known and 19 novel genes were found in an analysis based on PubMed and OMIM data 2307198