D10Mgh1 Marker Search Result - Rat Genome Database

Advanced Search (OLGA)

Symbol:

D10Mgh1

Previously known as:

oxsts5415; R3187;

RGD ID:

34128

Expected Size:

144 (bp)

Position

Rat Assembly	Chr	Position (strand)	Source
Celera	10	102,748,696 - 102,748,839	UniSTS
RH 2.0 Map	10	1407.7	RGD
Cytogenetic Map	10		RGD

Is Marker For:

Strains: AVN/Orl BBDP/Rhw BBDR/Rhw BC/CpbU BDIX/Han BDVII/Cub BN/SsNHsd BP/Cub BUF/Pit DA/PitN DON/Melb F344/Pit FHH/Eur IS/Kyo LE/Mol LEW/Pit LH/Mav MHS/Gib MNRA/N WN/N WKY/OlaHsd WTC/Kyo LOU/CHan MNR/N MR/Pit ODU/N WF/Pit WIST/Nhg SR/Jr MNS/Gib NP9 OKA/Wsl OM/Ztm P5C PVG/Pit SD/Rij SHR/OlaHsd SHRSP/Riv WAG/RijKyo GK/KyoSwe M520/N SS.LEW-(D10Rat17-D10Mgh1)/Ayd SS.LEW-(D10Rat119-D10Mgh1)/Ayd ACI/N BN-Lx/Cub SS.LEW-(D10Rat207-D10Mgh1)/Ayd LN/Mav SS.LEW-(D10Mco15-D10Mgh1)/Ayd GH/Omr NEDH/K SS/Jr COP/OlaHsd SS.LEW-(D10Mit1-D10Mgh1)/Jr SS.LEW-(D10Mco38-D10Mgh1)/Jr LOU.BN-(D10Mgh1-D10Mgh14)/Ins LEW.SS-(D10Mgh6-D10Mgh1)/Ayd LEW.SS-(D7Rat27-D7Mgh1)(D17Rat15-D17Rat51)(D10Mgh6-D10Mgh1)/Ayd
QTLs: Oia3 Oia5 Bp87 Cia27 Cm44 Bw57 Mcs15 Cm75 Bw102 Abfw5 Bw171

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Quantitative trait loci disposing for both experimental arthritis and encephalomyelitis in the DA rat; impact on severity of myelin oligodendrocyte glycoprotein-induced experimental autoimmune encephalomyelitis and antibody isotype pattern.	Dahlman I, etal., Eur J Immunol 1998 Jul;28(7):2188-96
2.	Data downloaded from Wellcome Trust, University of Oxford	Data downloaded from Wellcome Trust, University of Oxford
3.	Identification of rat susceptibility loci for adjuvant-oil-induced arthritis.	Lorentzen JC, etal., Proc Natl Acad Sci U S A 1998 May 26;95(11):6383-7
4.	UniSTS Pipeline	RGD automated pipelines
5.	RH Map Project	RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
6.	A high density integrated genetic linkage and radiation hybrid map of the laboratory rat	Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8
7.	Electronic Submission of SSLP Data Sets	Wilder R. Oct.2000. National Institute of Arthritis and Musculoskeletal and Skin Diseases, ARB Rat Genetic Database

Strains and Sequence

Sequence

Strain Variation

Strain, Expected Size(s)

Region

Nucleotide Sequences


GenBank Nucleotide	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

RGD Curation Notes

Note Type	Note	Reference

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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