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Gene: Efcab3 (EF-hand calcium binding domain 3) Rattus norvegicus
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Symbol: Efcab3
Name: EF-hand calcium binding domain 3
RGD ID: 1305423
Description: Predicted to have calcium ion binding activity. Orthologous to human EFCAB3 (EF-hand calcium binding domain 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: EF-hand calcium-binding domain-containing protein 3; LOC303589; MGC156757; RGD1305423; similar to 4921510J17Rik protein
Orthologs:
Homo sapiens (human) : EFCAB3 (EF-hand calcium binding domain 3)  HGNC  Alliance
Mus musculus (house mouse) : Efcab3 (EF-hand calcium binding domain 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Efcab3 (EF-hand calcium binding domain 3)
Pan paniscus (bonobo/pygmy chimpanzee) : EFCAB3 (EF-hand calcium binding domain 3)
Canis lupus familiaris (dog) : EFCAB3 (EF-hand calcium binding domain 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Efcab3 (EF-hand calcium binding domain 3)
Sus scrofa (pig) : EFCAB3 (EF-hand calcium binding domain 3)
Chlorocebus sabaeus (African green monkey) : EFCAB3 (EF-hand calcium binding domain 3)
Heterocephalus glaber (naked mole-rat) : Efcab3 (EF-hand calcium binding domain 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01093,304,559 - 93,332,849 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1093,305,969 - 93,332,702 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01093,063,814 - 93,093,159 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41094,469,169 - 94,501,102 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11094,011,230 - 94,515,216 (+)NCBI
Celera1088,730,638 - 88,760,671 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Efcab3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305423
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.