Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Smim5 (small integral membrane protein 5) Rattus norvegicus
Analyze
Symbol: Smim5
Name: small integral membrane protein 5
Description: Predicted to localize to the integral component of membrane. Orthologous to human SMIM5 (small integral membrane protein 5); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; furan.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hypothetical protein LOC689926; LOC689926; uncharacterized protein LOC689926
Orthologs:
Homo sapiens (human) : SMIM5 (small integral membrane protein 5)  HGNC  Alliance
Mus musculus (house mouse) : Smim5 (small integral membrane protein 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smim5 (small integral membrane protein 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SMIM5 (small integral membrane protein 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smim5 (small integral membrane protein 5)
Sus scrofa (pig) : SMIM5 (small integral membrane protein 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010104,451,222 - 104,457,002 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010103,828,437 - 103,835,934 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410106,007,671 - 106,013,451 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1099,708,969 - 99,714,749 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Smim5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1586374
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.