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Gene: Abca5 (ATP binding cassette subfamily A member 5) Rattus norvegicus
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Symbol: Abca5
Name: ATP binding cassette subfamily A member 5
RGD ID: 628661
Description: Predicted to have ATPase-coupled transmembrane transporter activity and lipid transporter activity. Predicted to be involved in cholesterol efflux; high-density lipoprotein particle remodeling; and negative regulation of macrophage derived foam cell differentiation. Localizes to Golgi apparatus. Orthologous to human ABCA5 (ATP binding cassette subfamily A member 5); PARTICIPATES IN transport pathway; INTERACTS WITH 1,3,5-trinitro-1,3,5-triazinane; 1,3-dinitrobenzene; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATP-binding cassette sub-family A member 5; ATP-binding cassette, sub-family A (ABC1), member 5; ATP-binding cassette, subfamily A (ABC1), member 5
Orthologs:
Homo sapiens (human) : ABCA5 (ATP binding cassette subfamily A member 5)  HGNC  Alliance
Mus musculus (house mouse) : Abca5 (ATP-binding cassette, sub-family A (ABC1), member 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Abca5 (ATP binding cassette subfamily A member 5)
Pan paniscus (bonobo/pygmy chimpanzee) : ABCA5 (ATP binding cassette subfamily A member 5)
Canis lupus familiaris (dog) : ABCA5 (ATP binding cassette subfamily A member 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Abca5 (ATP binding cassette subfamily A member 5)
Sus scrofa (pig) : ABCA5 (ATP binding cassette subfamily A member 5)
Chlorocebus sabaeus (African green monkey) : ABCA5 (ATP binding cassette subfamily A member 5)
Heterocephalus glaber (naked mole-rat) : Abca5 (ATP binding cassette subfamily A member 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01098,573,226 - 98,645,028 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1098,576,039 - 98,644,938 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01098,279,926 - 98,351,693 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41099,724,778 - 99,793,593 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11099,739,147 - 99,807,963 (-)NCBI
Celera1093,891,432 - 93,960,222 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Abca5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 628661
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2020-11-24
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.