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Gene: Tnrc6c (trinucleotide repeat containing adaptor 6C) Rattus norvegicus
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Symbol: Tnrc6c
Name: trinucleotide repeat containing adaptor 6C
Description: Predicted to have nucleic acid binding activity. Predicted to be involved in embryonic hemopoiesis; endoderm formation; and regulation of gene expression. Predicted to localize to the P-body; RISC complex; and nucleoplasm. Orthologous to human TNRC6C (trinucleotide repeat containing adaptor 6C); INTERACTS WITH (RS)-amphetamine; (+)-catechin (ortholog); 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC303774; RGD1310027; similar to KIAA1582 protein; trinucleotide repeat containing 6C
Orthologs:
Homo sapiens (human) : TNRC6C (trinucleotide repeat containing adaptor 6C)  HGNC  Alliance
Mus musculus (house mouse) : Tnrc6c (trinucleotide repeat containing 6C)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnrc6c (trinucleotide repeat containing adaptor 6C)
Pan paniscus (bonobo/pygmy chimpanzee) : TNRC6C (trinucleotide repeat containing adaptor 6C)
Canis lupus familiaris (dog) : TNRC6C (trinucleotide repeat containing adaptor 6C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnrc6c (trinucleotide repeat containing adaptor 6C)
Sus scrofa (pig) : TNRC6C (trinucleotide repeat containing adaptor 6C)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010106,698,359 - 106,763,639 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010106,337,197 - 106,403,097 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410107,829,754 - 107,854,869 (+)NCBIRGSC3.4rn4RGSC3.4
Celera10101,489,423 - 101,539,688 (+)NCBICelera
Cytogenetic Map10q32.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tnrc6c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310027
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.