Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ush1g (USH1 protein network component sans) Rattus norvegicus
Analyze
Symbol: Ush1g
Name: USH1 protein network component sans
Description: Predicted to have protein homodimerization activity and spectrin binding activity. Predicted to be involved in several processes, including inner ear development; photoreceptor cell maintenance; and sensory perception of sound. Predicted to localize to several cellular components, including the cilium; cytoskeleton; and photoreceptor inner segment. Human ortholog(s) of this gene implicated in Usher syndrome type 1G. Orthologous to human USH1G (USH1 protein network component sans); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; INTERACTS WITH 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine; indole-3-methanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC287819; Usher syndrome 1G; Usher syndrome 1G (autosomal recessive); Usher syndrome 1G homolog; Usher syndrome 1G homolog (human)
Orthologs:
Homo sapiens (human) : USH1G (USH1 protein network component sans)  HGNC  Alliance
Mus musculus (house mouse) : Ush1g (USH1 protein network component sans)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ush1g (USH1 protein network component sans)
Pan paniscus (bonobo/pygmy chimpanzee) : USH1G (USH1 protein network component sans)
Canis lupus familiaris (dog) : USH1G (USH1 protein network component sans)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ush1g (USH1 protein network component sans)
Sus scrofa (pig) : USH1G (USH1 protein network component sans)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.010103,866,566 - 103,873,416 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.010104,422,722 - 104,428,735 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410105,395,184 - 105,399,053 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.110105,406,916 - 105,414,392 (-)NCBI
Celera1099,135,313 - 99,139,182 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ush1g
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1304551
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.