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Gene: Adam11 (ADAM metallopeptidase domain 11) Rattus norvegicus

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Symbol:

Adam11

Name:

ADAM metallopeptidase domain 11

RGD ID:

1307515

Description:

Predicted to enable metalloendopeptidase activity. Predicted to be involved in behavioral response to chemical pain; establishment of protein localization; and proteolysis. Predicted to be located in membrane. Orthologous to human ADAM11 (ADAM metallopeptidase domain 11); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl; 4,4'-sulfonyldiphenol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

a disintegrin and metallopeptidase domain 11; a disintegrin and metalloprotease domain 11; disintegrin and metalloproteinase domain-containing protein 11; LOC360638

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ADAM11 (ADAM metallopeptidase domain 11)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Adam11 (a disintegrin and metallopeptidase domain 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Adam11 (ADAM metallopeptidase domain 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ADAM11 (ADAM metallopeptidase domain 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ADAM11 (ADAM metallopeptidase domain 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Adam11 (ADAM metallopeptidase domain 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ADAM11 (ADAM metallopeptidase domain 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ADAM11 (ADAM metallopeptidase domain 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Adam11 (ADAM metallopeptidase domain 11)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ADAM11 (ADAM metallopeptidase domain 11)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Adam11 (a disintegrin and metallopeptidase domain 11)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	adam11 (ADAM metallopeptidase domain 11)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	mmd	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	unc-71	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	adam11	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	88,224,185 - 88,242,865 (+)	NCBI		GRCr8
mRatBN7.2	10	87,724,115 - 87,742,773 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	87,724,234 - 87,741,562 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	92,762,390 - 92,778,065 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	92,227,796 - 92,243,437 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	87,621,117 - 87,636,758 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	90,731,260 - 90,749,221 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	90,731,148 - 90,749,217 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	90,521,054 - 90,539,008 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	91,881,174 - 91,896,961 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	91,895,008 - 91,910,463 (+)	NCBI
Celera	10	86,430,927 - 86,446,589 (+)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

hereditary breast ovarian cancer syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3,3',5-triiodo-L-thyronine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

Benzo[k]fluoranthene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

butanal (ISO)

cadmium dichloride (EXP)

carbon nanotube (ISO)

choline (ISO)

clofibrate (ISO)

copper(II) sulfate (ISO)

cyproconazole (ISO)

dichloroacetic acid (ISO)

dicrotophos (ISO)

disodium selenite (ISO)

endosulfan (EXP)

epoxiconazole (ISO)

folic acid (ISO)

furan (ISO)

inulin (ISO)

L-methionine (ISO)

malathion (ISO)

maneb (ISO)

methapyrilene (ISO)

paracetamol (EXP,ISO)

paraquat (ISO)

pentanal (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

propanal (ISO)

propiconazole (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sodium dichromate (EXP)

Soman (EXP)

sunitinib (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP,ISO)

triphenyl phosphate (EXP)

Triptolide (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

behavioral response to acetic acid induced pain (ISO)

behavioral response to formalin induced pain (ISO)

establishment of protein localization (ISO)

multicellular organismal response to stress (ISO)

proteolysis (IBA)

Cellular Component

membrane (IEA)

Molecular Function

metalloendopeptidase activity (IBA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Adam11
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	88,224,185 - 88,242,865 (+)	NCBI		GRCr8
mRatBN7.2	10	87,724,115 - 87,742,773 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	87,724,234 - 87,741,562 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	92,762,390 - 92,778,065 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	92,227,796 - 92,243,437 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	87,621,117 - 87,636,758 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	90,731,260 - 90,749,221 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	90,731,148 - 90,749,217 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	90,521,054 - 90,539,008 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	91,881,174 - 91,896,961 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	91,895,008 - 91,910,463 (+)	NCBI
Celera	10	86,430,927 - 86,446,589 (+)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

ADAM11
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	44,758,988 - 44,781,846 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	44,758,988 - 44,781,846 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	42,836,356 - 42,859,214 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	40,192,094 - 40,214,740 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	40,202,875 - 40,213,504	NCBI
Celera	17	39,547,073 - 39,569,717 (+)	NCBI		Celera
Cytogenetic Map	17	q21.31	NCBI
HuRef	17	38,601,676 - 38,624,346 (+)	NCBI		HuRef
CHM1_1	17	43,072,733 - 43,095,389 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	45,612,934 - 45,635,795 (+)	NCBI		T2T-CHM13v2.0

Adam11
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	102,652,261 - 102,671,089 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	102,652,265 - 102,671,088 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	102,761,413 - 102,780,263 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	102,761,439 - 102,780,262 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	102,622,753 - 102,641,576 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	102,577,696 - 102,595,124 (+)	NCBI		MGSCv36	mm8
Celera	11	114,440,352 - 114,491,184 (+)	NCBI		Celera
Cytogenetic Map	11	E1	NCBI
cM Map	11	66.48	NCBI

Adam11
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	17,608,732 - 17,614,619 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	17,608,732 - 17,614,469 (+)	NCBI	ChiLan1.0	ChiLan1.0

ADAM11
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	20,052,192 - 20,074,884 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	22,021,084 - 22,043,727 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	12,541,921 - 12,564,625 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	12,714,073 - 12,725,887 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	12,716,159 - 12,736,786 (-)	Ensembl	panpan1.1		panPan2

ADAM11
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	18,711,050 - 18,728,627 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	18,710,979 - 18,728,941 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	18,094,613 - 18,114,328 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	19,403,412 - 19,423,139 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	19,403,416 - 19,423,140 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	18,256,972 - 18,276,686 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	18,439,141 - 18,458,861 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	18,598,557 - 18,615,755 (-)	NCBI		UU_Cfam_GSD_1.0

Adam11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	18,035,582 - 18,055,802 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936541	1,138,790 - 1,159,054 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936541	1,138,797 - 1,159,016 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ADAM11
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	18,575,719 - 18,597,356 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	18,575,716 - 18,597,415 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	18,810,936 - 18,822,988 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ADAM11
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	61,621,707 - 61,644,813 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	61,621,673 - 61,644,723 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	32,374,324 - 32,397,561 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Adam11
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624795	474,616 - 485,778 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624795	473,438 - 516,741 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	52
Count of miRNA genes:	46
Interacting mature miRNAs:	52
Transcripts:	ENSRNOT00000064429
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1549846	Scl47	Serum cholesterol level QTL 47	3.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	51071897	96071897	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	27023535	98502431	Rat
8657410	Bp374	Blood pressure QTL 374			heart left ventricle size trait (VT:0002753)	heart left ventricle end-diastolic diameter (CMO:0000982)	10	67476608	107713808	Rat
631552	Vetf2	Vascular elastic tissue fragility QTL 2	4.5	0.0002	aorta elastic tissue integrity trait (VT:0010556)	artery internal elastic lamina non-tumorous lesion count (CMO:0001913)	10	35509383	91417879	Rat
61449	Ciaa2	CIA Autoantibody QTL 2	7.1		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	10	63719161	107713808	Rat
631555	Bp134	Blood pressure QTL 134		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	81012077	91729860	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
1298078	Stresp5	Stress response QTL 5	2.99	0.00025	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	42546145	107713808	Rat
1549831	Bss6	Bone structure and strength QTL 6	4		lumbar vertebra strength trait (VT:0010574)	vertebra ultimate force (CMO:0001678)	10	58073360	103073360	Rat
12903252	Cm113	Cardiac mass QTL 113		0.047	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	66817119	107713808	Rat
70164	Bw21	Body weight QTL 21	4.36	0.00005	body mass (VT:0001259)	body weight (CMO:0000012)	10	54296336	99451733	Rat
4889948	Bss91	Bone structure and strength QTL 91	4		tibia area (VT:1000281)	tibia midshaft total cross-sectional area (CMO:0001715)	10	83061236	92869129	Rat
1579919	Bp281	Blood pressure QTL 281		0.01	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50464802	95464802	Rat
2298548	Neuinf7	Neuroinflammation QTL 7	3.4		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	10	64939013	107713808	Rat
1302404	Cia27	Collagen induced arthritis QTL 27	2.6	0.0045	joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	10	76951790	107713808	Rat
1300107	Rf18	Renal function QTL 18	3.41		urine output (VT:0003620)	timed urine volume (CMO:0000260)	10	79272424	102982300	Rat
8694173	Bw149	Body weight QTL 149	4.38	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	10	44939359	89939359	Rat
2300218	Hpcl2	Hepatic cholesterol level QTL 2			liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	45529164	96099749	Rat
70168	Eae12	Experimental allergic encephalomyelitis QTL 12		0.0009	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	10	73599825	107713808	Rat
70171	Cari1	Carrageenan-induced inflammation QTL 1	4.9	0.0005	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	10	54296227	107713808	Rat
10450495	Bp383	Blood pressure QTL 383		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76743133	95464802	Rat
12903269	Am15	Aortic mass QTL 15		0.042	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	66817119	107713808	Rat
10450493	Bp382	Blood pressure QTL 382		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50860288	95860288	Rat
2313856	Bp342	Blood pressure QTL 342	4.4	0.0001	life span trait (VT:0005372)	age at time of death (CMO:0001193)	10	87807758	96620484	Rat
12903266	Cm114	Cardiac mass QTL 114		0.02	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	10	66817119	107713808	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2292617	Ept18	Estrogen-induced pituitary tumorigenesis QTL 18	3.9		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	10	73950353	96620293	Rat
2313103	Bss80	Bone structure and strength QTL 80	2	0.0001	tibia strength trait (VT:1000284)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	10	62556066	107556066	Rat
12880372	Am12	Aortic mass QTL 12		0.003	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	66817119	107713808	Rat
70193	Mcs7	Mammary carcinoma susceptibility QTL 7	2.38		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	72724423	107713808	Rat
2313105	Bss79	Bone structure and strength QTL 79	1.8	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	62556066	107556066	Rat
12880375	Kidm66	Kidney mass QTL 66		0.009	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	66817119	107713808	Rat
61363	Oia3	Oil induced arthritis QTL 3		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	87807758	107713808	Rat
9589030	Epfw9	Epididymal fat weight QTL 9	19.24	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	10	44939359	89939359	Rat
1357344	Bp249	Blood pressure QTL 249		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	67241334	98502431	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14991535	107556066	Rat
12880370	Cm105	Cardiac mass QTL 105		0.008	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	10	66817119	107713808	Rat
12880371	Cm106	Cardiac mass QTL 106		0.007	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	66817119	107713808	Rat
2306970	Anxrr22	Anxiety related response QTL 22	5.95		fear/anxiety-related behavior trait (VT:1000241)	number of periods of voluntary immobility (CMO:0001045)	10	61843496	98710773	Rat
11565453	Kidm58	Kidney mass QTL 58		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	66817119	107713808	Rat
1359017	Hrtrt21	Heart rate QTL 21	2.4		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	10	73695339	97272278	Rat
6893357	Bw102	Body weight QTL 102	0.5	0.36	body mass (VT:0001259)	body weight (CMO:0000012)	10	81012077	101828297	Rat
724556	Pur2	Proteinuria QTL 2	5.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	22931373	91127454	Rat
2306793	Ean5	Experimental allergic neuritis QTL 5	4.7		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	73049656	94495280	Rat
2306792	Ean4	Experimental allergic neuritis QTL 4	4		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	49495492	94495492	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	52269185	107713808	Rat
61396	Bp9	Blood pressure QTL 9	4.8	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	68920187	107713808	Rat
1358915	Stresp7	Stress response QTL 7	3.52		blood norepinephrine amount (VT:0005663)	plasma norepinephrine level (CMO:0001010)	10	65307813	107713808	Rat
70363	Bp71	Blood pressure QTL 71		0.04	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	61843496	106843496	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	29800910	91417879	Rat
6893366	Bw106	Body weight QTL 106	0.3	0.47	body mass (VT:0001259)	body weight (CMO:0000012)	10	70698731	107713808	Rat
631530	Tls3	T-lymphoma susceptibility QTL 3	0	0.0001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	10	27587226	96099902	Rat
1354608	Cm33	Cardiac mass QTL 33	2.8		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	10	55307972	93608131	Rat
1558643	Cm44	Cardiac mass QTL 44	4.8	0.0000368	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	61843496	100198886	Rat
8552805	Bw145	Body weight QTL 145	2.2		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	10	43608793	88608793	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
1576308	Schws1	Schwannoma susceptibility QTL 1		0.0041	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	40535708	107713808	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14991535	107713808	Rat
7207811	Bmd90	Bone mineral density QTL 90	5.2		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	10	49943710	94943710	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
7411614	Foco18	Food consumption QTL 18		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	10	44939359	89939359	Rat
1581559	Eae18	Experimental allergic encephalomyelitis QTL 18		0.00002	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	10	66108888	107555881	Rat
6893336	Cm75	Cardiac mass QTL 75	0.1	0.87	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	61843496	100198886	Rat
631547	Bp87	Blood pressure QTL 87	4.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	47869129	92869129	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
12880055	Am11	Aortic mass QTL 11		0.004	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	84503487	96432422	Rat
2292438	Bp311	Blood pressure QTL 311			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	76743133	95604677	Rat
2301398	Kidm38	Kidney mass QTL 38		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	10	84503487	96432422	Rat
2292436	Bp310	Blood pressure QTL 310			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50604677	95604677	Rat
1600367	Mcs15	Mammary carcinoma susceptibility QTL 15	4.5		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	10	72724423	107713808	Rat
1358188	Ept9	Estrogen-induced pituitary tumorigenesis QTL 9	3.9		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	10	73950353	96620293	Rat
631537	Oia4	Oil induced arthritis QTL 4			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	76128947	107713808	Rat
634354	Rends3	Renal damage susceptibility QTL 3		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	10	61997479	106997479	Rat
2301405	Cm69	Cardiac mass QTL 69		0.031	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	10	66817119	107713808	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	27023535	99451848	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006247380	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063269447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000064429 ⟹ ENSRNOP00000061628

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	87,724,234 - 87,741,562 (+)	Ensembl
Rnor_6.0 Ensembl	10	90,731,865 - 90,746,936 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093169

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	10	90,742,241 - 90,743,275 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093454

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	10	90,743,076 - 90,745,318 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093604 ⟹ ENSRNOP00000076197

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	87,724,614 - 87,741,562 (+)	Ensembl
Rnor_6.0 Ensembl	10	90,731,148 - 90,749,217 (+)	Ensembl

RefSeq Acc Id:

NM_001108300 ⟹ NP_001101770

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	88,224,902 - 88,240,582 (+)	NCBI
mRatBN7.2	10	87,724,807 - 87,740,488 (+)	NCBI
Rnor_6.0	10	90,731,865 - 90,746,936 (+)	NCBI
Rnor_5.0	10	90,521,054 - 90,539,008 (+)	NCBI
RGSC_v3.4	10	91,881,174 - 91,896,961 (+)	RGD
Celera	10	86,430,927 - 86,446,589 (+)	RGD

Sequence:

show sequence

GTCTTGGGGCCCTGGGTCCCAGTGGAGCTCTGCACTGGAGGAGCTCAGCCCATATGGGGAGCCC
GGAGAGTCCAGAGGGCCCTGAGGTCACAGAGCCCAGCCGGCTGGTAAGGGAGAGCTCCGGGGGA
GAGGTCCGAAAGCCACAGTTGGACACCAGGGTCCGCCAGGATCCACCCAGGGGGACGCCTGTTC
ACCTGGCCCAGGTGAGTTTCGTCATCCCAGCCTTCGACTCAAACTTCACTCTGGACCTGGAGCT
AAACCATCACCTCCTGTCCTCGCAGTATGTGGAACGCCACTTCAGCCGTGAGGGGACAAGGCAA
CACAGTACTGGGGCTGGAGACCACTGTTACTACCACGGGAAACTCCGTGACAACCCACACTCCT
TTGCTGCACTCTCTACCTGCCAGGGGCTGCATGGGGTCTTCTCTGATGGCAACCTGACTTACAT
CGTAGAGCCTAAGGAGATGGCTGGGCCTTGGGGACCCCCACAGGGACCCCTTCCCCACCTCATT
TACCGGACCCCTCTCCTCCCAGCCCCCTTTGGATGCAGGGAACCAGGCTGCCTGTTTGCAGTCC
CTGCCCAGTCTGCTGCCCCCAGCCGGCCCAAGCTAAGAAGGAAAAGGCAGGTCCGCAGGGGCCA
CCCCACGGTGCACAGCGAGACCAAGTATGTGGAGTTGATTGTGATCAACGACCACCAGCTGTTT
GAGCAGATGCGGCAGTCTGTGGTCCTCACCAGCAACTTTGCAAAATCTGTTGTGAACCTGGCAG
ACGTGATATACAAGGAACAGCTCAACACAAGAATTGTGCTGGTTGCCATGGAGACGTGGGCAGA
TGGGGACAAGATCCAGGTGCAGGATGACCTACTGGAGACCCTGGCCCGGCTTATGGTCTACCGG
CGGGAAGGTCTGCCTGAGCCCAGTGATGCCACCCACCTCTTCTCGGGTCGGACCTTCCAGAGCA
CCAGCAGCGGGGCGGCCTACGTAGGCGGTATCTGTTCACTGTCCAGGGGTGGAGGTGTAAACGA
GTATGGCAACATGGGAGCCATGGCAGTGACCCTGGCCCAGACGCTAGGGCAGAACTTGGGCATG
ATGTGGAACAAACACCGGAGCTCAGCAGGGGACTGCAAGTGTCCAGACATCTGGCTGGGCTGCA
TCATGGAGGACACAGGGTTCTATTTGCCCCGCAAGTTCTCGCGCTGCAGCATCGACGAATACAA
CCAGTTTCTGCAGGAGGGAGGCGGGAGTTGCCTGTTCAACAAGCCCCTCAAGCTCCTGGACCCT
CCCGAGTGCGGGAACGGCTTCGTGGAGGCCGGGGAGGAGTGCGACTGCGGGTCGGTGCAGGAAT
GCAGCCGAGCCGGGGGCAACTGCTGCAAGAAATGCACCCTGACGCACGACGCCATGTGCAGCGA
CGGGCTCTGCTGTCGCCGCTGCAAGTATGAGCCACGAGGTGTCTCCTGCCGAGAAGCGGTGAAC
GAGTGTGACATCGCGGAGACCTGCACTGGCGACTCAAGTCAGTGTCCCCCTAACCTTCACAAGC
TGGATGGTTACTACTGTGATCACGAGCAGGGTCGATGCTATGGAGGCCGCTGTAAAACCCGGGA
CCGGCAGTGCCAAGCCCTATGGGGCCATGTGGCTGCGGATCGTTTCTGCTACGAGAAGCTGAAT
GTAGAGGGGACAGAGCGTGGAAATTGTGGGCGCAAGGGATCTGGTTGGGTCCAGTGCAACAAGC
AGGATGTGCTCTGTGGCTTCCTTCTATGTGTCAACATCTCTGGAGCTCCTCGGCTAGGGGACCT
AGGGGGCGACATCAGCAGTGTCACCTTCTACCACCAGGGCAAGGAGTTGGACTGCAGGGGAGGC
CACGTGCAGCTAGCTGATGGCTCAGACCTGAGCTATGTGGAGGACGGCACAGCCTGTGGGCCCA
ACATGCTGTGCCTGGATCATCGCTGCCTGCCGGCCTCCGCCTTCAACTTCAGCACCTGCCCCGG
AAGCGGAGAGCGACGGATCTGCTCCCATCATGGGGTTTGCAGCAACGAAGGGAAGTGTATCTGT
CAGCCAGACTGGACAGGCAAAGACTGCAGTATTCACAACCCACTGCCCACATCCCCTCCCACCG
GGGAGACTGAGAGATACAAAGGTCCCAGCGGTACCAACATCATCATTGGCTCCATCGCCGGGGC
TGTCCTGGTCGCAGCCATCGTCCTGGGCGGCACGGGCTGGGGATTTAAAAACATCCGTCGCGGA
AGGTATGACCCGACCCAGCAGGGGGCAGTGTGATGCCGGCCACGTCATCCCTCCCGCTGTCCTT
GTCTCCATTTCATCCGTCCCTTTGCATTCTGTTGACCGGGAGCTGGGACCGATCCGTTCCCGCA
GCCCTGCAGGCAGCCTGGGAAAGCGAATCCGCTGTCTGCTCAGGCCCTTCCTCCTGCCCACCCG
CCTGTTGGGCCCTGGTTCACCTTCATCTGTCCTTTCCGCCGCCGGGTCCCATGGCCGGGTGGGC
GCTGGAACTGTGCCCCGCAACCCCTCCCCCTA

hide sequence

RefSeq Acc Id:

XM_006247379 ⟹ XP_006247441

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	88,224,185 - 88,242,865 (+)	NCBI
mRatBN7.2	10	87,724,116 - 87,741,176 (+)	NCBI
Rnor_6.0	10	90,731,261 - 90,747,594 (+)	NCBI
Rnor_5.0	10	90,521,054 - 90,539,008 (+)	NCBI

Sequence:

show sequence

TTTTCCCTCCCTCCCTCCCCGCGCCGCTCGCAGCCGCAGCCCCCGGACCCGGAGGATTATGAGC
GAACCATGAGGCGGCTGCGGCGCTGGGCGATCGCGGCTCTGCTGCTGTTGCCGCTGCTCCCCCC
GCCCGGTCTTGGGGCCCTGGGTCCCAGTGGAGCTCTGCACTGGAGGAGCTCAGCCCATATGGGG
AGCCCGGAGAGTCCAGAGGGCCCTGAGGTCACAGAGCCCAGCCGGCTGGTAAGGGAGAGCTCCG
GGGGAGAGGTCCGAAAGCCACAGTTGGACACCAGGGTCCGCCAGGATCCACCCAGGGGGACGCC
TGTTCACCTGGCCCAGGTGAGTTTCGTCATCCCAGCCTTCGACTCAAACTTCACTCTGGACCTG
GAGCTAAACCATCACCTCCTGTCCTCGCAGTATGTGGAACGCCACTTCAGCCGTGAGGGGACAA
GGCAACACAGTACTGGGGCTGGAGACCACTGTTACTACCACGGGAAACTCCGTGACAACCCACA
CTCCTTTGCTGCACTCTCTACCTGCCAGGGGCTGCATGGGGTCTTCTCTGATGGCAACCTGACT
TACATCGTAGAGCCTAAGGAGATGGCTGGGCCTTGGGGACCCCCACAGGGACCCCTTCCCCACC
TCATTTACCGGACCCCTCTCCTCCCAGCCCCCTTTGGATGCAGGGAACCAGGCTGCCTGTTTGC
AGTCCCTGCCCAGTCTGCTGCCCCCAGCCGGCCCAAGCTAAGAAGGAAAAGGCAGGTCCGCAGG
GGCCACCCCACGGTGCACAGCGAGACCAAGTATGTGGAGTTGATTGTGATCAACGACCACCAGC
TGTTTGAGCAGATGCGGCAGTCTGTGGTCCTCACCAGCAACTTTGCAAAATCTGTTGTGAACCT
GGCAGACGTGATATACAAGGAACAGCTCAACACAAGAATTGTGCTGGTTGCCATGGAGACGTGG
GCAGATGGGGACAAGATCCAGGTGCAGGATGACCTACTGGAGACCCTGGCCCGGCTTATGGTCT
ACCGGCGGGAAGGTCTGCCTGAGCCCAGTGATGCCACCCACCTCTTCTCGGGTCGGACCTTCCA
GAGCACCAGCAGCGGGGCGGCCTACGTAGGCGGTATCTGTTCACTGTCCAGGGGTGGAGGTGTA
AACGAGTATGGCAACATGGGAGCCATGGCAGTGACCCTGGCCCAGACGCTAGGGCAGAACTTGG
GCATGATGTGGAACAAACACCGGAGCTCAGCAGGGGACTGCAAGTGTCCAGACATCTGGCTGGG
CTGCATCATGGAGGACACAGGGTTCTATTTGCCCCGCAAGTTCTCGCGCTGCAGCATCGACGAA
TACAACCAGTTTCTGCAGGAGGGAGGCGGGAGTTGCCTGTTCAACAAGCCCCTCAAGCTCCTGG
ACCCTCCCGAGTGCGGGAACGGCTTCGTGGAGGCCGGGGAGGAGTGCGACTGCGGGTCGGTGCA
GGAATGCAGCCGAGCCGGGGGCAACTGCTGCAAGAAATGCACCCTGACGCACGACGCCATGTGC
AGCGACGGGCTCTGCTGTCGCCGCTGCAAGTATGAGCCACGAGGTGTCTCCTGCCGAGAAGCGG
TGAACGAGTGTGACATCGCGGAGACCTGCACTGGCGACTCAAGTCAGTGTCCCCCTAACCTTCA
CAAGCTGGATGGTTACTACTGTGATCACGAGCAGGGTCGATGCTATGGAGGCCGCTGTAAAACC
CGGGACCGGCAGTGCCAAGCCCTATGGGGCCATGTGGCTGCGGATCGTTTCTGCTACGAGAAGC
TGAATGTAGAGGGGACAGAGCGTGGAAATTGTGGGCGCAAGGGATCTGGTTGGGTCCAGTGCAA
CAAGCAGGATGTGCTCTGTGGCTTCCTTCTATGTGTCAACATCTCTGGAGCTCCTCGGCTAGGG
GACCTAGGGGGCGACATCAGCAGTGTCACCTTCTACCACCAGGGCAAGGAGTTGGACTGCAGGG
GAGGCCACGTGCAGCTAGCTGATGGCTCAGACCTGAGCTATGTGGAGGACGGCACAGCCTGTGG
GCCCAACATGCTGTGCCTGGATCATCGCTGCCTGCCGGCCTCCGCCTTCAACTTCAGCACCTGC
CCCGGAAGCGGAGAGCGACGGATCTGCTCCCATCATGGGGTTTGCAGCAACGAAGGGAAGTGTA
TCTGTCAGCCAGACTGGACAGGCAAAGACTGCAGTATTCACAACCCACTGCCCACATCCCCTCC
CACCGGGGAGACTGAGAGATACAAAGGTCCCAGCGGTACCAACATCATCATTGGCTCCATCGCC
GGGGCTGTCCTGGTCGCAGCCATCGTCCTGGGCGGCACGGGCTGGGGATTTAAAAACATCCGTC
GCGGAAGGTATGACCCGACCCAGCAGGGGGCAGTGTGATGCCGGCCACGTCATCCCTCCCGCTG
TCCTTGTCTCCATTTCATCCGTCCCTTTGCATTCTGTTGACCGGGAGCTGGGACCGATCCGTTC
CCGCAGCCCTGCAGGCAGCCTGGGAAAGCGAATCCGCTGTCTGCTCAGGCCCTTCCTCCTGCCC
ACCCGCCTGTTGGGCCCTGGTTCACCTTCATCTGTCCTTTCCGCCGCCGGGTCCCATGGCCGGG
TGGGCGCTGGAACTGTGCCCCGCAACCCCTCCCCCTAGGAGGGGGCCTCCCCCTGCGTCTTGCC
CATCTGTTTTGTCTACCATGCCACCGCTGTCTGACCTCTGCCAGAACCCCCACCTGGCCAGCCT
GTGACTTGATGCCTCCAGGACCTCTGGGGAGGAGCGGGGGCAGCTGGAGGGCTCACCCTCAGAG
CCCAGTCTCATGTCCTCTCCTGATGCCCTCTTCTCCATTCCAGGTCCGGAGGGGCCTAAGTGCC
ACCCTGCTCCCTCCGAGCCTGGCGCCCACCGTCTCGGCCCTGAACCACGAGGCTGCCTCCACCC
TGCCACTGAGGGAGGCACCATGCAAATGTCTTCCAGGTCCAAACCCTTCAACTCCTGGCTGCGC
AGGGGTTGGGGGCTGGGACTATGGCCTCCGCCTTTCAGACCACTTGGGTAGAGGGGCCTGGAGG
AGGGACTTCCTGCCCAGTTCCCCATTCCACCTCATTCGGCTTTGGCCTTGCACACGTCTCCCCC
TGTGAATGTAGCTTCCATCAACACAGACTGCCACAGCTCACGTTGGGGCCTGGGTTGGTGCCTG
GTGGGGGCAGCTGGGTGACCCCTCTTCAAAACCAGGCAGCTGGAACCAGGGTGGTGGCTCCCCT
GGACCTCATAGGAAGGGGCTGATCTATATTCATTCTCTCTCTCTCTCTCTCTCTC

hide sequence

RefSeq Acc Id:

XM_006247380 ⟹ XP_006247442

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	88,224,189 - 88,242,865 (+)	NCBI
mRatBN7.2	10	87,724,115 - 87,740,836 (+)	NCBI
Rnor_6.0	10	90,731,261 - 90,747,250 (+)	NCBI
Rnor_5.0	10	90,521,054 - 90,539,008 (+)	NCBI

Sequence:

show sequence

TTTTCCCTCCCTCCCTCCCCGCGCCGCTCGCAGCCGCAGCCCCCGGACCCGGAGGATTATGAGC
GAACCATGAGGCGGCTGCGGCGCTGGGCGATCGCGGCTCTGCTGCTGTTGCCGCTGCTCCCCCC
GCCCGGTCTTGGGGCCCTGGGTCCCAGTGGAGCTCTGCACTGGAGGAGCTCAGCCCATATGGGG
AGCCCGGAGAGTCCAGAGGGCCCTGAGGTCACAGAGCCCAGCCGGCTGGTAAGGGAGAGCTCCG
GGGGAGAGGTCCGAAAGCCACAGTTGGACACCAGGGTCCGCCAGGATCCACCCAGGGGGACGCC
TGTTCACCTGGCCCAGGTGAGTTTCGTCATCCCAGCCTTCGACTCAAACTTCACTCTGGACCTG
GAGCTAAACCATCACCTCCTGTCCTCGCAGTATGTGGAACGCCACTTCAGCCGTGAGGGGACAA
GGCAACACAGTACTGGGGCTGGAGACCACTGTTACTACCACGGGAAACTCCGTGACAACCCACA
CTCCTTTGCTGCACTCTCTACCTGCCAGGGGCTGCATGGGGTCTTCTCTGATGGCAACCTGACT
TACATCGTAGAGCCTAAGGAGATGGCTGGGCCTTGGGGACCCCCACAGGGACCCCTTCCCCACC
TCATTTACCGGACCCCTCTCCTCCCAGCCCCCTTTGGATGCAGGGAACCAGGCTGCCTGTTTGC
AGTCCCTGCCCAGTCTGCTGCCCCCAGCCGGCCCAAGCTAAGAAGGAAAAGGCAGGTCCGCAGG
GGCCACCCCACGGTGCACAGCGAGACCAAGTATGTGGAGTTGATTGTGATCAACGACCACCAGC
TGTTTGAGCAGATGCGGCAGTCTGTGGTCCTCACCAGCAACTTTGCAAAATCTGTTGTGAACCT
GGCAGACGTGATATACAAGGAACAGCTCAACACAAGAATTGTGCTGGTTGCCATGGAGACGTGG
GCAGATGGGGACAAGATCCAGGTGCAGGATGACCTACTGGAGACCCTGGCCCGGCTTATGGTCT
ACCGGCGGGAAGGTCTGCCTGAGCCCAGTGATGCCACCCACCTCTTCTCGGGTCGGACCTTCCA
GAGCACCAGCAGCGGGGCGGCCTACGTAGGCGGTATCTGTTCACTGTCCAGGGGTGGAGGTGTA
AACGAGTATGGCAACATGGGAGCCATGGCAGTGACCCTGGCCCAGACGCTAGGGCAGAACTTGG
GCATGATGTGGAACAAACACCGGAGCTCAGCAGGGGACTGCAAGTGTCCAGACATCTGGCTGGG
CTGCATCATGGAGGACACAGGGTTCTATTTGCCCCGCAAGTTCTCGCGCTGCAGCATCGACGAA
TACAACCAGTTTCTGCAGGAGGGAGGCGGGAGTTGCCTGTTCAACAAGCCCCTCAAGCTCCTGG
ACCCTCCCGAGTGCGGGAACGGCTTCGTGGAGGCCGGGGAGGAGTGCGACTGCGGGTCGGTGCA
GGAATGCAGCCGAGCCGGGGGCAACTGCTGCAAGAAATGCACCCTGACGCACGACGCCATGTGC
AGCGACGGGCTCTGCTGTCGCCGCTGCAAGTATGAGCCACGAGGTGTCTCCTGCCGAGAAGCGG
TGAACGAGTGTGACATCGCGGAGACCTGCACTGGCGACTCAAGTCAGTGTCCCCCTAACCTTCA
CAAGCTGGATGGTTACTACTGTGATCACGAGCAGGGTCGATGCTATGGAGGCCGCTGTAAAACC
CGGGACCGGCAGTGCCAAGCCCTATGGGGCCATGTGGCTGCGGATCGTTTCTGCTACGAGAAGC
TGAATGTAGAGGGGACAGAGCGTGGAAATTGTGGGCGCAAGGGATCTGGTTGGGTCCAGTGCAA
CAAGCAGGATGTGCTCTGTGGCTTCCTTCTATGTGTCAACATCTCTGGAGCTCCTCGGCTAGGG
GACCTAGGGGGCGACATCAGCAGTGTCACCTTCTACCACCAGGGCAAGGAGTTGGACTGCAGGG
GAGGCCACGTGCAGCTAGCTGATGGCTCAGACCTGAGCTATGTGGAGGACGGCACAGCCTGTGG
GCCCAACATGCTGTGCCTGGATCATCGCTGCCTGCCGGCCTCCGCCTTCAACTTCAGCACCTGC
CCCGGAAGCGGAGAGCGACGGATCTGCTCCCATCATGGGGTTTGCAGCAACGAAGGGAAGTGTA
TCTGTCAGCCAGACTGGACAGGCAAAGACTGCAGTATTCACAACCCACTGCCCACATCCCCTCC
CACCGGGGAGACTGAGAGATACAAAGGTCCCAGCGGTACCAACATCATCATTGGCTCCATCGCC
GGGGCTGTCCTGGTCGCAGCCATCGTCCTGGGCGGCACGGGCTGGGGATTTAAAAACATCCGTC
GCGGAAGGTCCGGAGGGGCCTAAGTGCCACCCTGCTCCCTCCGAGCCTGGCGCCCACCGTCTCG
GCCCTGAACCACGAGGCTGCCTCCACCCTGCCACTGAGGGAGGCACCATGCAAATGTCT

hide sequence

RefSeq Acc Id:

XM_017597402 ⟹ XP_017452891

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	88,224,188 - 88,242,865 (+)	NCBI
mRatBN7.2	10	87,724,115 - 87,741,176 (+)	NCBI
Rnor_6.0	10	90,731,261 - 90,747,594 (+)	NCBI

Sequence:

show sequence

TTTTCCCTCCCTCCCTCCCCGCGCCGCTCGCAGCCGCAGCCCCCGGACCCGGAGGATTATGAGC
GAACCATGAGGCGGCTGCGGCGCTGGGCGATCGCGGCTCTGCTGCTGTTGCCGCTGCTCCCCCC
GCCCGGTCTTGGGGCCCTGGGTCCCAGTGGAGCTCTGCACTGGAGGAGCTCAGCCCATATGGGG
AGCCCGGAGAGTCCAGAGGGCCCTGAGGTCACAGAGCCCAGCCGGCTGGTAAGGGAGAGCTCCG
GGGGAGAGGTCCGAAAGCCACAGTTGGACACCAGGGTCCGCCAGGATCCACCCAGGGGGACGCC
TGTTCACCTGGCCCAGGTGAGTTTCGTCATCCCAGCCTTCGACTCAAACTTCACTCTGGACCTG
GAGCTAAACCATCACCTCCTGTCCTCGCAGTATGTGGAACGCCACTTCAGCCGTGAGGGGACAA
GGCAACACAGTACTGGGGCTGGAGACCACTGTTACTACCACGGGAAACTCCGTGACAACCCACA
CTCCTTTGCTGCACTCTCTACCTGCCAGGGGCTGCATGGGGTCTTCTCTGATGGCAACCTGACT
TACATCGTAGAGCCTAAGGAGATGGCTGGGCCTTGGGGACCCCCACAGGGACCCCTTCCCCACC
TCATTTACCGGACCCCTCTCCTCCCAGCCCCCTTTGGATGCAGGGAACCAGGCTGCCTGTTTGC
AGTCCCTGCCCAGTCTGCTGCCCCCAGCCGGCCCAAGCTAAGAAGGAAAAGGCAGGTCCGCAGG
GGCCACCCCACGGTGCACAGCGAGACCAAGTATGTGGAGTTGATTGTGATCAACGACCACCAGC
TGTTTGAGCAGATGCGGCAGTCTGTGGTCCTCACCAGCAACTTTGCAAAATCTGTTGTGAACCT
GGCAGACGTGATATACAAGGAACAGCTCAACACAAGAATTGTGCTGGTTGCCATGGAGACGTGG
GCAGATGGGGACAAGATCCAGGTGCAGGATGACCTACTGGAGACCCTGGCCCGGCTTATGGTCT
ACCGGCGGGAAGGTCTGCCTGAGCCCAGTGATGCCACCCACCTCTTCTCGGGTCGGACCTTCCA
GAGCACCAGCAGCGGGGCGGCCTACGTAGGCGGTATCTGTTCACTGTCCAGGGGTGGAGGTGTA
AACGAGTATGGCAACATGGGAGCCATGGCAGTGACCCTGGCCCAGACGCTAGGGCAGAACTTGG
GCATGATGTGGAACAAACACCGGAGCTCAGCAGGGGACTGCAAGTGTCCAGACATCTGGCTGGG
CTGCATCATGGAGGACACAGGGTTCTATTTGCCCCGCAAGTTCTCGCGCTGCAGCATCGACGAA
TACAACCAGTTTCTGCAGGAGGGAGGCGGGAGTTGCCTGTTCAACAAGCCCCTCAAGCTCCTGG
ACCCTCCCGAGTGCGGGAACGGCTTCGTGGAGGCCGGGGAGGAGTGCGACTGCGGGTCGGTGCA
GGAATGCAGCCGAGCCGGGGGCAACTGCTGCAAGAAATGCACCCTGACGCACGACGCCATGTGC
AGCGACGGGCTCTGCTGTCGCCGCTGCAAGTATGAGCCACGAGGTGTCTCCTGCCGAGAAGCGG
TGAACGAGTGTGACATCGCGGAGACCTGCACTGGCGACTCAAGTCAGTGTCCCCCTAACCTTCA
CAAGCTGGATGGTTACTACTGTGATCACGAGCAGGGTCGATGCTATGGAGGCCGCTGTAAAACC
CGGGACCGGCAGTGCCAAGCCCTATGGGGCCATGTGGCTGCGGATCGTTTCTGCTACGAGAAGC
TGAATGTAGAGGGGACAGAGCGTGGAAATTGTGGGCGCAAGGGATCTGGTTGGGTCCAGTGCAA
CAAGCAGGATGTGCTCTGTGGCTTCCTTCTATGTGTCAACATCTCTGGAGCTCCTCGGCTAGGG
GACCTAGGGGGCGACATCAGCAGTGTCACCTTCTACCACCAGGGCAAGGAGTTGGACTGCAGGG
GAGGCCACGTGCAGCTAGCTGATGGCTCAGACCTGAGCTATGTGGAGGACGGCACAGCCTGTGG
GCCCAACATGCTGTGCCTGGATCATCGCTGCCTGCCGGCCTCCGCCTTCAACTTCAGCACCTGC
CCCGGAAGCGGAGAGCGACGGATCTGCTCCCATCATGGGGTTTGCAGCAACGAAGGGAAGTGTA
TCTGTCAGCCAGACTGGACAGGCAAAGACTGCAGTATTCACAACCCACTGCCCACATCCCCTCC
CACCGGGGAGACTGAGAGATACAAAGAAACATCCGTCGCGGAAGGTATGACCCGACCCAGCAGG
GGGCAGTGTGATGCCGGCCACGTCATCCCTCCCGCTGTCCTTGTCTCCATTTCATCCGTCCCTT
TGCATTCTGTTGACCGGGAGCTGGGACCGATCCGTTCCCGCAGCCCTGCAGGCAGCCTGGGAAA
GCGAATCCGCTGTCTGCTCAGGCCCTTCCTCCTGCCCACCCGCCTGTTGGGCCCTGGTTCACCT
TCATCTGTCCTTTCCGCCGCCGGGTCCCATGGCCGGGTGGGCGCTGGAACTGTGCCCCGCAACC
CCTCCCCCTAGGAGGGGGCCTCCCCCTGCGTCTTGCCCATCTGTTTTGTCTACCATGCCACCGC
TGTCTGACCTCTGCCAGAACCCCCACCTGGCCAGCCTGTGACTTGATGCCTCCAGGACCTCTGG
GGAGGAGCGGGGGCAGCTGGAGGGCTCACCCTCAGAGCCCAGTCTCATGTCCTCTCCTGATGCC
CTCTTCTCCATTCCAGGTCCGGAGGGGCCTAAGTGCCACCCTGCTCCCTCCGAGCCTGGCGCCC
ACCGTCTCGGCCCTGAACCACGAGGCTGCCTCCACCCTGCCACTGAGGGAGGCACCATGCAAAT
GTCTTCCAGGTCCAAACCCTTCAACTCCTGGCTGCGCAGGGGTTGGGGGCTGGGACTATGGCCT
CCGCCTTTCAGACCACTTGGGTAGAGGGGCCTGGAGGAGGGACTTCCTGCCCAGTTCCCCATTC
CACCTCATTCGGCTTTGGCCTTGCACACGTCTCCCCCTGTGAATGTAGCTTCCATCAACACAGA
CTGCCACAGCTCACGTTGGGGCCTGGGTTGGTGCCTGGTGGGGGCAGCTGGGTGACCCCTCTTC
AAAACCAGGCAGCTGGAACCAGGGTGGTGGCTCCCCTGGACCTCATAGGAAGGGGCTGATCTAT
ATTCATTCTCTCTCTCTCTCTCTCTCTC

hide sequence

RefSeq Acc Id:

XM_017597403 ⟹ XP_017452892

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	88,224,188 - 88,242,865 (+)	NCBI
mRatBN7.2	10	87,724,115 - 87,742,773 (+)	NCBI
Rnor_6.0	10	90,731,260 - 90,749,221 (+)	NCBI

Sequence:

show sequence

TTTTTCCCTCCCTCCCTCCCCGCGCCGCTCGCAGCCGCAGCCCCCGGACCCGGAGGATTATGAG
CGAACCATGAGGCGGCTGCGGCGCTGGGCGATCGCGGCTCTGCTGCTGTTGCCGCTGCTCCCCC
CGCCCGGTCTTGGGGCCCTGGGTCCCAGTGGAGCTCTGCACTGGAGGAGCTCAGCCCATATGGG
GAGCCCGGAGAGTCCAGAGGGCCCTGAGGTCACAGAGCCCAGCCGGCTGGTAAGGGAGAGCTCC
GGGGGAGAGGTCCGAAAGCCACAGTTGGACACCAGGGTCCGCCAGGATCCACCCAGGGGGACGC
CTGTTCACCTGGCCCAGGTGAGTTTCGTCATCCCAGCCTTCGACTCAAACTTCACTCTGGACCT
GGAGCTAAACCATCACCTCCTGTCCTCGCAGTATGTGGAACGCCACTTCAGCCGTGAGGGGACA
AGGCAACACAGTACTGGGGCTGGAGACCACTGTTACTACCACGGGAAACTCCGTGACAACCCAC
ACTCCTTTGCTGCACTCTCTACCTGCCAGGGGCTGCATGGGGTCTTCTCTGATGGCAACCTGAC
TTACATCGTAGAGCCTAAGGAGATGGCTGGGCCTTGGGGACCCCCACAGGGACCCCTTCCCCAC
CTCATTTACCGGACCCCTCTCCTCCCAGCCCCCTTTGGATGCAGGGAACCAGGCTGCCTGTTTG
CAGTCCCTGCCCAGTCTGCTGCCCCCAGCCGGCCCAAGCTAAGAAGGAAAAGGCAGGTCCGCAG
GGGCCACCCCACGGTGCACAGCGAGACCAAGTATGTGGAGTTGATTGTGATCAACGACCACCAG
CTGTTTGAGCAGATGCGGCAGTCTGTGGTCCTCACCAGCAACTTTGCAAAATCTGTTGTGAACC
TGGCAGACGTGATATACAAGGAACAGCTCAACACAAGAATTGTGCTGGTTGCCATGGAGACGTG
GGCAGATGGGGACAAGATCCAGGTGCAGGATGACCTACTGGAGACCCTGGCCCGGCTTATGGTC
TACCGGCGGGAAGGTCTGCCTGAGCCCAGTGATGCCACCCACCTCTTCTCGGGTCGGACCTTCC
AGAGCACCAGCAGCGGGGCGGCCTACGTAGGCGGTATCTGTTCACTGTCCAGGGGTGGAGGTGT
AAACGAGTATGGCAACATGGGAGCCATGGCAGTGACCCTGGCCCAGACGCTAGGGCAGAACTTG
GGCATGATGTGGAACAAACACCGGAGCTCAGCAGGGGACTGCAAGTGTCCAGACATCTGGCTGG
GCTGCATCATGGAGGACACAGGGTTCTATTTGCCCCGCAAGTTCTCGCGCTGCAGCATCGACGA
ATACAACCAGTTTCTGCAGGAGGGAGGCGGGAGTTGCCTGTTCAACAAGCCCCTCAAGCTCCTG
GACCCTCCCGAGTGCGGGAACGGCTTCGTGGAGGCCGGGGAGGAGTGCGACTGCGGGTCGGTGC
AGGAATGCAGCCGAGCCGGGGGCAACTGCTGCAAGAAATGCACCCTGACGCACGACGCCATGTG
CAGCGACGGGCTCTGCTGTCGCCGCTGCAAGTATGAGCCACGAGGTGTCTCCTGCCGAGAAGCG
GTGAACGAGTGTGACATCGCGGAGACCTGCACTGGCGACTCAAGTCAGTGTCCCCCTAACCTTC
ACAAGCTGGATGGTTACTACTGTGATCACGAGCAGGGTCGATGCTATGGAGGCCGCTGTAAAAC
CCGGGACCGGCAGTGCCAAGCCCTATGGGGCCATGTGGCTGCGGATCGTTTCTGCTACGAGAAG
CTGAATGTAGAGGGGACAGAGCGTGGAAATTGTGGGCGCAAGGGATCTGGTTGGGTCCAGTGCA
ACAAGCAGGATGTGCTCTGTGGCTTCCTTCTATGTGTCAACATCTCTGGAGCTCCTCGGCTAGG
GGACCTAGGGGGCGACATCAGCAGTGTCACCTTCTACCACCAGGGCAAGGAGTTGGACTGCAGG
GGAGGCCACGTGCAGCTAGCTGATGGCTCAGACCTGAGCTATGTGGAGGACGGCACAGCCTGTG
GGCCCAACATGCTGTGCCTGGATCATCGCTGCCTGCCGGCCTCCGCCTTCAACTTCAGCACCTG
CCCCGGAAGCGGAGAGCGACGGATCTGCTCCCATCATGGGGTTTGCAGCAACGAAGGGAAGTGT
ATCTGTCAGCCAGACTGGACAGGCAAAGACTGCAGTATTCACAACCCACTGCCCACATCCCCTC
CCACCGGGGAGACTGAGAGATACAAAGAAACATCCGTCGCGGAAGGTCCGGAGGGGCCTAAGTG
CCACCCTGCTCCCTCCGAGCCTGGCGCCCACCGTCTCGGCCCTGAACCACGAGGCTGCCTCCAC
CCTGCCACTGAGGGAGGCACCATGCAAATGTCTTCCAGGTCCAAACCCTTCAACTCCTGGCTGC
GCAGGGGTTGGGGGCTGGGACTATGGCCTCCGCCTTTCAGACCACTTGGGTAGAGGGGCCTGGA
GGAGGGACTTCCTGCCCAGTTCCCCATTCCACCTCATTCGGCTTTGGCCTTGCACACGTCTCCC
CCTGTGAATGTAGCTTCCATCAACACAGACTGCCACAGCTCACGTTGGGGCCTGGGTTGGTGCC
TGGTGGGGGCAGCTGGGTGACCCCTCTTCAAAACCAGGCAGCTGGAACCAGGGTGGTGGCTCCC
CTGGACCTCATAGGAAGGGGCTGATCTATATTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTTTTTAACCTTAACTGATGAATGTAGCCCTTGGGTTGCTGGGGCC
AGGGGGCAGTTGTAGGGATGTTTTGACACTTACATGAGGGCCTCCAGGGCTTGAGGCCTTGAGA
CCTCCCACATCCCTTCCTGGGAGGCCCAAACTGGAATCCTGTCAGGGAACCCAGCCGGGGCAGG
ATAGCCCTGCTTGCCCCACCTCTGCCCAGCTTAGTAGAAGTCAGAGTGCTGATTCAAACCAAAG
CTGCCTGTCCTGTGCCCACTGCCTAGCTCATGGGACTCTCTGTCCCAGACTGTCTTTGATTCCG
AACTGACCATCCTGTCCCTGCCAGGGTGCATGCATTTGGGGGTATAGAAAAATATGGTCCCTAA
AATAAAATGGCACCTTTCCCTTACAAGAAGGGTGATTCTGGGGCTGTCTCAGGGTTAAGGTGCC
CCCTGATGTGGCCTGCCTTACTCCAGAGCAGGCTGTCTTAGCAGGGAGGACTCAGTAGGGAGAA
CCACGGGTGGCCCTGTGCCCCAGGGTTAGTGCCTGTGATGTGTATGTATCAGGAGATCAGGAAA
GGGCAGGGCTCATGGATGGTTGGTTATAGGACTAGGAAAATCCTCAAATCCTCAAATCCTCAAC
CACCCACCCCCCGTCAAAACATTTATTCATCACCTGTAGTCTAGGGCTGAGTAGTAAGTTTACA
GATGTTCCTGTCTGCCCTCCTCTGGTCCTTGTTGCCCTCCCCAGCCTGAGAGCTGGACCAAGGC
TGGTAGAGCTGCTTAGCCCTCCCACGAAGTCCAGCAGGCCCTGCCTTCACAGCCCTATGTGAGG
CAGACAAGACCTGGCTCCAAGCCCGAAGAGCCAGCTGGCGGGGCAAGACGGAGCAGGCTCCCTT
ATGGATGAAAGCCACAATGAAAGGAAGCCCCTTCTTGGGGACACCCCACTCAGGCTAAGTAGGA
GTTCTGGACACCCCAGGGCCAGGGAGTTGCCTGTTTGTGTTCCTCTTGTGTCTGAGGACTCTTC
AAGGAAGGCTAATGGAGAAAACAGCTTCATTTATCTGAACCAATCCTGCAGCACCTTGGAGCCT
ACAACCCATTGGCAGCTTTGGGGATGGCCAGATGGTGTTGGCCACAGTGGGGTCCTCAGCACTG
AGCCCCAGCTGCCACTGTCCTAGTGACAACAGGACAGACTCAGGCCACCAGCCCCACTAGCCGA
GGACAGGAGAAAGGCTGGATTTTGCATTGTTGCTGGGATACCTTGAGACCTCCATCAGGTGCAC
CTGGGCGCAGACATGTGAATCCACACCTCTGTACCACTGTGAAGGCCTCTGCATACAAGGACAT
GACCACATGTGTCCTTGGTGAAGAACACAACACTTCCTGTGACCAGTCCCCACGGGGGCCCCAA
CTTCCTGCATCCTCCTGCCCTACCCTAGCAGGGCCTGACCTGGCAGCACCCAGGAAAGAAGAGA
GGAGGGGGCTGCATTCACCTGGCCTGGACCTGGGTCCCTCCGCATCCTGTAAATATGTCATCTG
GGCTGGGGTGGGGAGGCAGGGCCCGGGGCCCACATTAAAGATTAAAGATACGTTCTGGGCTTCC
ATAGAGCTCACACCAACCCA

hide sequence

RefSeq Acc Id:

XM_017597404 ⟹ XP_017452893

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	88,234,069 - 88,242,865 (+)	NCBI
mRatBN7.2	10	87,733,828 - 87,741,176 (+)	NCBI
Rnor_6.0	10	90,740,424 - 90,747,594 (+)	NCBI

Sequence:

show sequence

TGGGGTCTTCTCTGATGGCAACCTGACTTACATCGTAGAGCCTAAGGAGATGGCTGGGCCTTGG
GGACCCCCACAGGGACCCCTTCCCCACCTCATTTACCGGACCCCTCTCCTCCCAGCCCCCTTTG
GATGCAGGGAACCAGGCTGCCTGTTTGCAGTCCCTGCCCAGTCTGCTGCCCCCAGCCGGCCCAA
GCTAAGAAGGAAAAGGTCCGCAGGGGCCACCCCACGGTGCACAGCGAGACCAAGTATGTGGAGT
TGATTGTGATCAACGACCACCAGCTGTTTGAGCAGATGCGGCAGTCTGTGGTCCTCACCAGCAA
CTTTGCAAAATCTGTTGTGAACCTGGCAGACGTGATATACAAGGAACAGCTCAACACAAGAATT
GTGCTGGTTGCCATGGAGACGTGGGCAGATGGGGACAAGATCCAGGTGCAGGATGACCTACTGG
AGACCCTGGCCCGGCTTATGGTCTACCGGCGGGAAGGTCTGCCTGAGCCCAGTGATGCCACCCA
CCTCTTCTCGGGTCGGACCTTCCAGAGCACCAGCAGCGGGGCGGCCTACGTAGGCGGTATCTGT
TCACTGTCCAGGGGTGGAGGTGTAAACGAGTATGGCAACATGGGAGCCATGGCAGTGACCCTGG
CCCAGACGCTAGGGCAGAACTTGGGCATGATGTGGAACAAACACCGGAGCTCAGCAGGGGACTG
CAAGTGTCCAGACATCTGGCTGGGCTGCATCATGGAGGACACAGGGTTCTATTTGCCCCGCAAG
TTCTCGCGCTGCAGCATCGACGAATACAACCAGTTTCTGCAGGAGGGAGGCGGGAGTTGCCTGT
TCAACAAGCCCCTCAAGCTCCTGGACCCTCCCGAGTGCGGGAACGGCTTCGTGGAGGCCGGGGA
GGAGTGCGACTGCGGGTCGGTGCAGGAATGCAGCCGAGCCGGGGGCAACTGCTGCAAGAAATGC
ACCCTGACGCACGACGCCATGTGCAGCGACGGGCTCTGCTGTCGCCGCTGCAAGTATGAGCCAC
GAGGTGTCTCCTGCCGAGAAGCGGTGAACGAGTGTGACATCGCGGAGACCTGCACTGGCGACTC
AAGTCAGTGTCCCCCTAACCTTCACAAGCTGGATGGTTACTACTGTGATCACGAGCAGGGTCGA
TGCTATGGAGGCCGCTGTAAAACCCGGGACCGGCAGTGCCAAGCCCTATGGGGCCATGTGGCTG
CGGATCGTTTCTGCTACGAGAAGCTGAATGTAGAGGGGACAGAGCGTGGAAATTGTGGGCGCAA
GGGATCTGGTTGGGTCCAGTGCAACAAGCAGGATGTGCTCTGTGGCTTCCTTCTATGTGTCAAC
ATCTCTGGAGCTCCTCGGCTAGGGGACCTAGGGGGCGACATCAGCAGTGTCACCTTCTACCACC
AGGGCAAGGAGTTGGACTGCAGGGGAGGCCACGTGCAGCTAGCTGATGGCTCAGACCTGAGCTA
TGTGGAGGACGGCACAGCCTGTGGGCCCAACATGCTGTGCCTGGATCATCGCTGCCTGCCGGCC
TCCGCCTTCAACTTCAGCACCTGCCCCGGAAGCGGAGAGCGACGGATCTGCTCCCATCATGGGG
TTTGCAGCAACGAAGGGAAGTGTATCTGTCAGCCAGACTGGACAGGCAAAGACTGCAGTATTCA
CAACCCACTGCCCACATCCCCTCCCACCGGGGAGACTGAGAGATACAAAGAAACATCCGTCGCG
GAAGGTATGACCCGACCCAGCAGGGGGCAGTGTGATGCCGGCCACGTCATCCCTCCCGCTGTCC
TTGTCTCCATTTCATCCGTCCCTTTGCATTCTGTTGACCGGGAGCTGGGACCGATCCGTTCCCG
CAGCCCTGCAGGCAGCCTGGGAAAGCGAATCCGCTGTCTGCTCAGGCCCTTCCTCCTGCCCACC
CGCCTGTTGGGCCCTGGTTCACCTTCATCTGTCCTTTCCGCCGCCGGGTCCCATGGCCGGGTGG
GCGCTGGAACTGTGCCCCGCAACCCCTCCCCCTAGGAGGGGGCCTCCCCCTGCGTCTTGCCCAT
CTGTTTTGTCTACCATGCCACCGCTGTCTGACCTCTGCCAGAACCCCCACCTGGCCAGCCTGTG
ACTTGATGCCTCCAGGACCTCTGGGGAGGAGCGGGGGCAGCTGGAGGGCTCACCCTCAGAGCCC
AGTCTCATGTCCTCTCCTGATGCCCTCTTCTCCATTCCAGGTCCGGAGGGGCCTAAGTGCCACC
CTGCTCCCTCCGAGCCTGGCGCCCACCGTCTCGGCCCTGAACCACGAGGCTGCCTCCACCCTGC
CACTGAGGGAGGCACCATGCAAATGTCTTCCAGGTCCAAACCCTTCAACTCCTGGCTGCGCAGG
GGTTGGGGGCTGGGACTATGGCCTCCGCCTTTCAGACCACTTGGGTAGAGGGGCCTGGAGGAGG
GACTTCCTGCCCAGTTCCCCATTCCACCTCATTCGGCTTTGGCCTTGCACACGTCTCCCCCTGT
GAATGTAGCTTCCATCAACACAGACTGCCACAGCTCACGTTGGGGCCTGGGTTGGTGCCTGGTG
GGGGCAGCTGGGTGACCCCTCTTCAAAACCAGGCAGCTGGAACCAGGGTGGTGGCTCCCCTGGA
CCTCATAGGAAGGGGCTGATCTATATTCATTCTCTCTCTCTCTCTCTCTCTC

hide sequence

RefSeq Acc Id:

XM_017597405 ⟹ XP_017452894

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	88,234,236 - 88,242,865 (+)	NCBI
mRatBN7.2	10	87,734,188 - 87,741,176 (+)	NCBI
Rnor_6.0	10	90,740,424 - 90,747,594 (+)	NCBI

Sequence:

show sequence

TGGGGTCTTCTCTGATGGCAACCTGACTTACATCGTAGAGCCTAAGGAGATGGCTGGGCCTTGG
GGACCCCCACAGGGACCCCTTCCCCACCTCATTTACCGGACCCCTCTCCTCCCAGCCCCCTTTG
GATGCAGGGAACCAGGCTGCCTGTTTGCAGTCCCTGCCCAGTCTGCTGCCCCCAGCCGGCCCAA
GCTAAGAAGGAAAAGGTCCGCAGGGGCCACCCCACGGTGCACAGCGAGACCAAGTATGTGGAGT
TGATTGTGATCAACGACCACCAGCTGTTTGAGCAGATGCGGCAGTCTGTGGTCCTCACCAGCAA
CTTTGCAAAATCTGTTGTGAACCTGGCAGACGTGATATACAAGGAACAGCTCAACACAAGAATT
GTGCTGGTTGCCATGGAGACGTGGGCAGATGGGGACAAGATCCAGGTGCAGGATGACCTACTGG
AGACCCTGGCCCGGCTTATGGTCTACCGGCGGGAAGGTCTGCCTGAGCCCAGTGATGCCACCCA
CCTCTTCTCGGGTCGGACCTTCCAGAGCACCAGCAGCGGGGCGGCCTACGTAGGCGGTATCTGT
TCACTGTCCAGGGGTGGAGGTGTAAACGAGTATGGCAACATGGGAGCCATGGCAGTGACCCTGG
CCCAGACGCTAGGGCAGAACTTGGGCATGATGTGGAACAAACACCGGAGCTCAGCAGGGGACTG
CAAGTGTCCAGACATCTGGCTGGGCTGCATCATGGAGGACACAGGGTTCTATTTGCCCCGCAAG
TTCTCGCGCTGCAGCATCGACGAATACAACCAGTTTCTGCAGGAGGGAGGCGGGAGTTGCCTGT
TCAACAAGCCCCTCAAGCTCCTGGACCCTCCCGAGTGCGGGAACGGCTTCGTGGAGGCCGGGGA
GGAGTGCGACTGCGGGTCGGTGCAGGAATGCAGCCGAGCCGGGGGCAACTGCTGCAAGAAATGC
ACCCTGACGCACGACGCCATGTGCAGCGACGGGCTCTGCTGTCGCCGCTGCAAGTATGAGCCAC
GAGGTGTCTCCTGCCGAGAAGCGGTGAACGAGTGTGACATCGCGGAGACCTGCACTGGCGACTC
AAGTCAGTGTCCCCCTAACCTTCACAAGCTGGATGGTTACTACTGTGATCACGAGCAGGGTCGA
TGCTATGGAGGCCGCTGTAAAACCCGGGACCGGCAGTGCCAAGCCCTATGGGGCCATGTGGCTG
CGGATCGTTTCTGCTACGAGAAGCTGAATGTAGAGGGGACAGAGCGTGGAAATTGTGGGCGCAA
GGGATCTGGTTGGGTCCAGTGCAACAAGCAGGATGTGCTCTGTGGCTTCCTTCTATGTGTCAAC
ATCTCTGGAGCTCCTCGGCTAGGGGACCTAGGGGGCGACATCAGCAGTGTCACCTTCTACCACC
AGGGCAAGGAGTTGGACTGCAGGGGAGGCCACGTGCAGCTAGCTGATGGCTCAGACCTGAGCTA
TGTGGAGGACGGCACAGCCTGTGGGCCCAACATGCTGTGCCTGGATCATCGCTGCCTGCCGGCC
TCCGCCTTCAACTTCAGCACCTGCCCCGGAAGCGGAGAGCGACGGATCTGCTCCCATCATGGGG
TTTGCAGCAACGAAGGGAAGTGTATCTGTCAGCCAGACTGGACAGGCAAAGACTGCAGTATTCA
CAACCCACTGCCCACATCCCCTCCCACCGGGGAGACTGAGAGATACAAAGGTCCCAGCGGTACC
AACATCATCATTGGCTCCATCGCCGGGGCTGTCCTGGTCGCAGCCATCGTCCTGGGCGGCACGG
GCTGGGGATTTAAAAACATCCGTCGCGGAAGGTATGACCCGACCCAGCAGGGGGCAGTGTGATG
CCGGCCACGTCATCCCTCCCGCTGTCCTTGTCTCCATTTCATCCGTCCCTTTGCATTCTGTTGA
CCGGGAGCTGGGACCGATCCGTTCCCGCAGCCCTGCAGGCAGCCTGGGAAAGCGAATCCGCTGT
CTGCTCAGGCCCTTCCTCCTGCCCACCCGCCTGTTGGGCCCTGGTTCACCTTCATCTGTCCTTT
CCGCCGCCGGGTCCCATGGCCGGGTGGGCGCTGGAACTGTGCCCCGCAACCCCTCCCCCTAGGA
GGGGGCCTCCCCCTGCGTCTTGCCCATCTGTTTTGTCTACCATGCCACCGCTGTCTGACCTCTG
CCAGAACCCCCACCTGGCCAGCCTGTGACTTGATGCCTCCAGGACCTCTGGGGAGGAGCGGGGG
CAGCTGGAGGGCTCACCCTCAGAGCCCAGTCTCATGTCCTCTCCTGATGCCCTCTTCTCCATTC
CAGGTCCGGAGGGGCCTAAGTGCCACCCTGCTCCCTCCGAGCCTGGCGCCCACCGTCTCGGCCC
TGAACCACGAGGCTGCCTCCACCCTGCCACTGAGGGAGGCACCATGCAAATGTCTTCCAGGTCC
AAACCCTTCAACTCCTGGCTGCGCAGGGGTTGGGGGCTGGGACTATGGCCTCCGCCTTTCAGAC
CACTTGGGTAGAGGGGCCTGGAGGAGGGACTTCCTGCCCAGTTCCCCATTCCACCTCATTCGGC
TTTGGCCTTGCACACGTCTCCCCCTGTGAATGTAGCTTCCATCAACACAGACTGCCACAGCTCA
CGTTGGGGCCTGGGTTGGTGCCTGGTGGGGGCAGCTGGGTGACCCCTCTTCAAAACCAGGCAGC
TGGAACCAGGGTGGTGGCTCCCCTGGACCTCATAGGAAGGGGCTGATCTATATTCATTCTCTCT
CTCTCTCTCTCTCTC

hide sequence

RefSeq Acc Id:

XM_063269447 ⟹ XP_063125517

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	88,234,236 - 88,242,865 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101770	(Get FASTA)	NCBI Sequence Viewer
	XP_006247441	(Get FASTA)	NCBI Sequence Viewer
	XP_006247442	(Get FASTA)	NCBI Sequence Viewer
	XP_017452891	(Get FASTA)	NCBI Sequence Viewer
	XP_017452892	(Get FASTA)	NCBI Sequence Viewer
	XP_017452893	(Get FASTA)	NCBI Sequence Viewer
	XP_017452894	(Get FASTA)	NCBI Sequence Viewer
	XP_063125517	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM06228	(Get FASTA)	NCBI Sequence Viewer
	EDM06229	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000061628.3
	ENSRNOP00000076197.2

RefSeq Acc Id:

NP_001101770 ⟸ NM_001108300

- UniProtKB:

A6HJM4 (UniProtKB/TrEMBL), A6HJM3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGSPESPEGPEVTEPSRLVRESSGGEVRKPQLDTRVRQDPPRGTPVHLAQVSFVIPAFDSNFTL
DLELNHHLLSSQYVERHFSREGTRQHSTGAGDHCYYHGKLRDNPHSFAALSTCQGLHGVFSDGN
LTYIVEPKEMAGPWGPPQGPLPHLIYRTPLLPAPFGCREPGCLFAVPAQSAAPSRPKLRRKRQV
RRGHPTVHSETKYVELIVINDHQLFEQMRQSVVLTSNFAKSVVNLADVIYKEQLNTRIVLVAME
TWADGDKIQVQDDLLETLARLMVYRREGLPEPSDATHLFSGRTFQSTSSGAAYVGGICSLSRGG
GVNEYGNMGAMAVTLAQTLGQNLGMMWNKHRSSAGDCKCPDIWLGCIMEDTGFYLPRKFSRCSI
DEYNQFLQEGGGSCLFNKPLKLLDPPECGNGFVEAGEECDCGSVQECSRAGGNCCKKCTLTHDA
MCSDGLCCRRCKYEPRGVSCREAVNECDIAETCTGDSSQCPPNLHKLDGYYCDHEQGRCYGGRC
KTRDRQCQALWGHVAADRFCYEKLNVEGTERGNCGRKGSGWVQCNKQDVLCGFLLCVNISGAPR
LGDLGGDISSVTFYHQGKELDCRGGHVQLADGSDLSYVEDGTACGPNMLCLDHRCLPASAFNFS
TCPGSGERRICSHHGVCSNEGKCICQPDWTGKDCSIHNPLPTSPPTGETERYKGPSGTNIIIGS
IAGAVLVAAIVLGGTGWGFKNIRRGRYDPTQQGAV

hide sequence

RefSeq Acc Id:	XP_006247442 ⟸ XM_006247380
- Peptide Label:	isoform X4
- UniProtKB:	D4A6U1 (UniProtKB/TrEMBL), A6HJM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRRLRRWAIAALLLLPLLPPPGLGALGPSGALHWRSSAHMGSPESPEGPEVTEPSRLVRESSGG EVRKPQLDTRVRQDPPRGTPVHLAQVSFVIPAFDSNFTLDLELNHHLLSSQYVERHFSREGTRQ HSTGAGDHCYYHGKLRDNPHSFAALSTCQGLHGVFSDGNLTYIVEPKEMAGPWGPPQGPLPHLI YRTPLLPAPFGCREPGCLFAVPAQSAAPSRPKLRRKRQVRRGHPTVHSETKYVELIVINDHQLF EQMRQSVVLTSNFAKSVVNLADVIYKEQLNTRIVLVAMETWADGDKIQVQDDLLETLARLMVYR REGLPEPSDATHLFSGRTFQSTSSGAAYVGGICSLSRGGGVNEYGNMGAMAVTLAQTLGQNLGM MWNKHRSSAGDCKCPDIWLGCIMEDTGFYLPRKFSRCSIDEYNQFLQEGGGSCLFNKPLKLLDP PECGNGFVEAGEECDCGSVQECSRAGGNCCKKCTLTHDAMCSDGLCCRRCKYEPRGVSCREAVN ECDIAETCTGDSSQCPPNLHKLDGYYCDHEQGRCYGGRCKTRDRQCQALWGHVAADRFCYEKLN VEGTERGNCGRKGSGWVQCNKQDVLCGFLLCVNISGAPRLGDLGGDISSVTFYHQGKELDCRGG HVQLADGSDLSYVEDGTACGPNMLCLDHRCLPASAFNFSTCPGSGERRICSHHGVCSNEGKCIC QPDWTGKDCSIHNPLPTSPPTGETERYKGPSGTNIIIGSIAGAVLVAAIVLGGTGWGFKNIRRG RSGGA hide sequence

RefSeq Acc Id:	XP_006247441 ⟸ XM_006247379
- Peptide Label:	isoform X3
- UniProtKB:	A6HJM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRRLRRWAIAALLLLPLLPPPGLGALGPSGALHWRSSAHMGSPESPEGPEVTEPSRLVRESSGG EVRKPQLDTRVRQDPPRGTPVHLAQVSFVIPAFDSNFTLDLELNHHLLSSQYVERHFSREGTRQ HSTGAGDHCYYHGKLRDNPHSFAALSTCQGLHGVFSDGNLTYIVEPKEMAGPWGPPQGPLPHLI YRTPLLPAPFGCREPGCLFAVPAQSAAPSRPKLRRKRQVRRGHPTVHSETKYVELIVINDHQLF EQMRQSVVLTSNFAKSVVNLADVIYKEQLNTRIVLVAMETWADGDKIQVQDDLLETLARLMVYR REGLPEPSDATHLFSGRTFQSTSSGAAYVGGICSLSRGGGVNEYGNMGAMAVTLAQTLGQNLGM MWNKHRSSAGDCKCPDIWLGCIMEDTGFYLPRKFSRCSIDEYNQFLQEGGGSCLFNKPLKLLDP PECGNGFVEAGEECDCGSVQECSRAGGNCCKKCTLTHDAMCSDGLCCRRCKYEPRGVSCREAVN ECDIAETCTGDSSQCPPNLHKLDGYYCDHEQGRCYGGRCKTRDRQCQALWGHVAADRFCYEKLN VEGTERGNCGRKGSGWVQCNKQDVLCGFLLCVNISGAPRLGDLGGDISSVTFYHQGKELDCRGG HVQLADGSDLSYVEDGTACGPNMLCLDHRCLPASAFNFSTCPGSGERRICSHHGVCSNEGKCIC QPDWTGKDCSIHNPLPTSPPTGETERYKGPSGTNIIIGSIAGAVLVAAIVLGGTGWGFKNIRRG RYDPTQQGAV hide sequence

RefSeq Acc Id:	XP_017452892 ⟸ XM_017597403
- Peptide Label:	isoform X2
- UniProtKB:	A6HJM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRRLRRWAIAALLLLPLLPPPGLGALGPSGALHWRSSAHMGSPESPEGPEVTEPSRLVRESSGG EVRKPQLDTRVRQDPPRGTPVHLAQVSFVIPAFDSNFTLDLELNHHLLSSQYVERHFSREGTRQ HSTGAGDHCYYHGKLRDNPHSFAALSTCQGLHGVFSDGNLTYIVEPKEMAGPWGPPQGPLPHLI YRTPLLPAPFGCREPGCLFAVPAQSAAPSRPKLRRKRQVRRGHPTVHSETKYVELIVINDHQLF EQMRQSVVLTSNFAKSVVNLADVIYKEQLNTRIVLVAMETWADGDKIQVQDDLLETLARLMVYR REGLPEPSDATHLFSGRTFQSTSSGAAYVGGICSLSRGGGVNEYGNMGAMAVTLAQTLGQNLGM MWNKHRSSAGDCKCPDIWLGCIMEDTGFYLPRKFSRCSIDEYNQFLQEGGGSCLFNKPLKLLDP PECGNGFVEAGEECDCGSVQECSRAGGNCCKKCTLTHDAMCSDGLCCRRCKYEPRGVSCREAVN ECDIAETCTGDSSQCPPNLHKLDGYYCDHEQGRCYGGRCKTRDRQCQALWGHVAADRFCYEKLN VEGTERGNCGRKGSGWVQCNKQDVLCGFLLCVNISGAPRLGDLGGDISSVTFYHQGKELDCRGG HVQLADGSDLSYVEDGTACGPNMLCLDHRCLPASAFNFSTCPGSGERRICSHHGVCSNEGKCIC QPDWTGKDCSIHNPLPTSPPTGETERYKETSVAEGPEGPKCHPAPSEPGAHRLGPEPRGCLHPA TEGGTMQMSSRSKPFNSWLRRGWGLGLWPPPFRPLG hide sequence

RefSeq Acc Id:	XP_017452891 ⟸ XM_017597402
- Peptide Label:	isoform X1
- UniProtKB:	A6HJM3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRRLRRWAIAALLLLPLLPPPGLGALGPSGALHWRSSAHMGSPESPEGPEVTEPSRLVRESSGG EVRKPQLDTRVRQDPPRGTPVHLAQVSFVIPAFDSNFTLDLELNHHLLSSQYVERHFSREGTRQ HSTGAGDHCYYHGKLRDNPHSFAALSTCQGLHGVFSDGNLTYIVEPKEMAGPWGPPQGPLPHLI YRTPLLPAPFGCREPGCLFAVPAQSAAPSRPKLRRKRQVRRGHPTVHSETKYVELIVINDHQLF EQMRQSVVLTSNFAKSVVNLADVIYKEQLNTRIVLVAMETWADGDKIQVQDDLLETLARLMVYR REGLPEPSDATHLFSGRTFQSTSSGAAYVGGICSLSRGGGVNEYGNMGAMAVTLAQTLGQNLGM MWNKHRSSAGDCKCPDIWLGCIMEDTGFYLPRKFSRCSIDEYNQFLQEGGGSCLFNKPLKLLDP PECGNGFVEAGEECDCGSVQECSRAGGNCCKKCTLTHDAMCSDGLCCRRCKYEPRGVSCREAVN ECDIAETCTGDSSQCPPNLHKLDGYYCDHEQGRCYGGRCKTRDRQCQALWGHVAADRFCYEKLN VEGTERGNCGRKGSGWVQCNKQDVLCGFLLCVNISGAPRLGDLGGDISSVTFYHQGKELDCRGG HVQLADGSDLSYVEDGTACGPNMLCLDHRCLPASAFNFSTCPGSGERRICSHHGVCSNEGKCIC QPDWTGKDCSIHNPLPTSPPTGETERYKETSVAEGMTRPSRGQCDAGHVIPPAVLVSISSVPLH SVDRELGPIRSRSPAGSLGKRIRCLLRPFLLPTRLLGPGSPSSVLSAAGSHGRVGAGTVPRNPS P hide sequence

RefSeq Acc Id:

XP_017452894 ⟸ XM_017597405

- Peptide Label:

isoform X6

- Sequence:

show sequence

MQGTRLPVCSPCPVCCPQPAQAKKEKVRRGHPTVHSETKYVELIVINDHQLFEQMRQSVVLTSN
FAKSVVNLADVIYKEQLNTRIVLVAMETWADGDKIQVQDDLLETLARLMVYRREGLPEPSDATH
LFSGRTFQSTSSGAAYVGGICSLSRGGGVNEYGNMGAMAVTLAQTLGQNLGMMWNKHRSSAGDC
KCPDIWLGCIMEDTGFYLPRKFSRCSIDEYNQFLQEGGGSCLFNKPLKLLDPPECGNGFVEAGE
ECDCGSVQECSRAGGNCCKKCTLTHDAMCSDGLCCRRCKYEPRGVSCREAVNECDIAETCTGDS
SQCPPNLHKLDGYYCDHEQGRCYGGRCKTRDRQCQALWGHVAADRFCYEKLNVEGTERGNCGRK
GSGWVQCNKQDVLCGFLLCVNISGAPRLGDLGGDISSVTFYHQGKELDCRGGHVQLADGSDLSY
VEDGTACGPNMLCLDHRCLPASAFNFSTCPGSGERRICSHHGVCSNEGKCICQPDWTGKDCSIH
NPLPTSPPTGETERYKGPSGTNIIIGSIAGAVLVAAIVLGGTGWGFKNIRRGRYDPTQQGAV

hide sequence

RefSeq Acc Id:

XP_017452893 ⟸ XM_017597404

- Peptide Label:

isoform X5

- Sequence:

show sequence

MQGTRLPVCSPCPVCCPQPAQAKKEKVRRGHPTVHSETKYVELIVINDHQLFEQMRQSVVLTSN
FAKSVVNLADVIYKEQLNTRIVLVAMETWADGDKIQVQDDLLETLARLMVYRREGLPEPSDATH
LFSGRTFQSTSSGAAYVGGICSLSRGGGVNEYGNMGAMAVTLAQTLGQNLGMMWNKHRSSAGDC
KCPDIWLGCIMEDTGFYLPRKFSRCSIDEYNQFLQEGGGSCLFNKPLKLLDPPECGNGFVEAGE
ECDCGSVQECSRAGGNCCKKCTLTHDAMCSDGLCCRRCKYEPRGVSCREAVNECDIAETCTGDS
SQCPPNLHKLDGYYCDHEQGRCYGGRCKTRDRQCQALWGHVAADRFCYEKLNVEGTERGNCGRK
GSGWVQCNKQDVLCGFLLCVNISGAPRLGDLGGDISSVTFYHQGKELDCRGGHVQLADGSDLSY
VEDGTACGPNMLCLDHRCLPASAFNFSTCPGSGERRICSHHGVCSNEGKCICQPDWTGKDCSIH
NPLPTSPPTGETERYKETSVAEGMTRPSRGQCDAGHVIPPAVLVSISSVPLHSVDRELGPIRSR
SPAGSLGKRIRCLLRPFLLPTRLLGPGSPSSVLSAAGSHGRVGAGTVPRNPSP

hide sequence

Ensembl Acc Id:

ENSRNOP00000076197 ⟸ ENSRNOT00000093604

Ensembl Acc Id:

ENSRNOP00000061628 ⟸ ENSRNOT00000064429

RefSeq Acc Id:	XP_063125517 ⟸ XM_063269447
- Peptide Label:	isoform X5

Protein Domains

Disintegrin EGF-like Peptidase M12B

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A1W2Q6C2-F1-model_v2	AlphaFold	A0A1W2Q6C2	1-778	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13697799

Promoter ID:

EPDNEW_R8320

Type:

multiple initiation site

Name:

Adam11_1

Description:

ADAM metallopeptidase domain 11

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	90,731,146 - 90,731,206	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1307515	AgrOrtholog
BioCyc Gene	G2FUF-23082	BioCyc
Ensembl Genes	ENSRNOG00000002753	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000064429.3	UniProtKB/TrEMBL
	ENSRNOT00000093604.2	UniProtKB/TrEMBL
Gene3D-CATH	3.40.390.10	UniProtKB/TrEMBL
	4.10.70.10	UniProtKB/TrEMBL
	Laminin	UniProtKB/TrEMBL
InterPro	ADAM_Cys-rich	UniProtKB/TrEMBL
	Blood-coag_inhib_Disintegrin	UniProtKB/TrEMBL
	Disintegrin_CS	UniProtKB/TrEMBL
	Disintegrin_dom_sf	UniProtKB/TrEMBL
	EGF_3	UniProtKB/TrEMBL
	EGF_extracell	UniProtKB/TrEMBL
	MetalloPept_cat_dom	UniProtKB/TrEMBL
	Peptidase_M12B	UniProtKB/TrEMBL
	Peptidase_M12B_N	UniProtKB/TrEMBL
	Reprolysin_adamalysin	UniProtKB/TrEMBL
KEGG Report	rno:360638	UniProtKB/TrEMBL
NCBI Gene	360638	ENTREZGENE
PANTHER	ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN	UniProtKB/TrEMBL
	DISINTEGRIN AND METALLOPROTEINASE DOMAIN-CONTAINING PROTEIN 11	UniProtKB/TrEMBL
Pfam	ADAM_CR	UniProtKB/TrEMBL
	Disintegrin	UniProtKB/TrEMBL
	EGF_2	UniProtKB/TrEMBL
	Pep_M12B_propep	UniProtKB/TrEMBL
	Reprolysin	UniProtKB/TrEMBL
PhenoGen	Adam11	PhenoGen
PRINTS	DISINTEGRIN	UniProtKB/TrEMBL
PROSITE	ADAM_MEPRO	UniProtKB/TrEMBL
	DISINTEGRIN_1	UniProtKB/TrEMBL
	DISINTEGRIN_2	UniProtKB/TrEMBL
	EGF_1	UniProtKB/TrEMBL
	EGF_3	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000002753	RatGTEx
SMART	ACR	UniProtKB/TrEMBL
	DISIN	UniProtKB/TrEMBL
Superfamily-SCOP	Disintegrin	UniProtKB/TrEMBL
	Metalloproteases ('zincins'), catalytic domain	UniProtKB/TrEMBL
UniProt	A0A1W2Q6C2_RAT	UniProtKB/TrEMBL
	A6HJM3	ENTREZGENE, UniProtKB/TrEMBL
	A6HJM4	ENTREZGENE, UniProtKB/TrEMBL
	D4A6U1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-09-18	Adam11	ADAM metallopeptidase domain 11	Adam11	a disintegrin and metallopeptidase domain 11	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Adam11	a disintegrin and metallopeptidase domain 11	Adam11_predicted	a disintegrin and metallopeptidase domain 11 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Adam11_predicted	a disintegrin and metallopeptidase domain 11 (predicted)		a disintegrin and metalloprotease domain 11 (predicted)	Name updated	1299863	APPROVED
2005-01-12	Adam11_predicted	a disintegrin and metalloprotease domain 11 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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