Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Atp6v0a1 (ATPase H+ transporting V0 subunit a1) Rattus norvegicus
Analyze
Symbol: Atp6v0a1
Name: ATPase H+ transporting V0 subunit a1
Description: Predicted to have ATPase binding activity and proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in regulation of macroautophagy; toxin transport; and vacuolar acidification. Localizes to the integral component of synaptic vesicle membrane. Orthologous to human ATP6V0A1 (ATPase H+ transporting V0 subunit a1); PARTICIPATES IN oxidative phosphorylation pathway; phagocytosis pathway; rheumatoid arthritis pathway; INTERACTS WITH 1,3-dinitrobenzene; 4-amino-2,6-dinitrotoluene; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Atp6n1; Atp6n1a; ATPase H+ transporting lysosomal (vacuolar proton pump) noncatalytic accessory protein 1 (110/160 kDa); ATPase, H+ transporting, lysosomal (vacuolar proton pump) non-catalytic accessory protein 1A (110/116kD); ATPase, H+ transporting, lysosomal (vacuolar proton pump) noncatalytic accessory protein 1 (110/160 kDa); ATPase, H+ transporting, lysosomal noncatalytic accessory protein 1a; ATPase, H+ transporting, lysosomal V0 subunit a; ATPase, H+ transporting, lysosomal V0 subunit a isoform 1; ATPase, H+ transporting, lysosomal V0 subunit A1; clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit; V-ATPase 116 kDa; v-H+ATPase subunit a1; V-type proton ATPase 116 kDa subunit a; V-type proton ATPase 116 kDa subunit a isoform 1; vacuolar adenosine triphosphatase subunit Ac116; vacuolar proton pump subunit 1; vacuolar proton translocating ATPase 116 kDa subunit a
Orthologs:
Homo sapiens (human) : ATP6V0A1 (ATPase H+ transporting V0 subunit a1)  HGNC  Alliance
Mus musculus (house mouse) : Atp6v0a1 (ATPase, H+ transporting, lysosomal V0 subunit A1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp6v0a1 (ATPase H+ transporting V0 subunit a1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP6V0A1 (ATPase H+ transporting V0 subunit a1)
Canis lupus familiaris (dog) : ATP6V0A1 (ATPase H+ transporting V0 subunit a1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp6v0a1 (ATPase H+ transporting V0 subunit a1)
Sus scrofa (pig) : ATP6V0A1 (ATPase H+ transporting V0 subunit a1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01088,914,264 - 88,967,736 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01088,710,520 - 88,766,232 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41089,948,286 - 90,072,304 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11089,964,972 - 90,086,670 (+)NCBI
Celera1084,654,189 - 84,707,639 (+)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Atp6v0a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 68405
Created: 2001-07-11
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.