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Gene: Ghdc (GH3 domain containing) Rattus norvegicus
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Symbol: Ghdc
Name: GH3 domain containing
Description: Predicted to have acid-amino acid ligase activity. Predicted to localize to the endoplasmic reticulum. Orthologous to human GHDC (GH3 domain containing); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene; bisphenol A.
Type: protein-coding
RefSeq Status: INFERRED
Also known as: GH3 domain-containing protein; LOC303542; RGD1308881; similar to D11lgp1
Orthologs:
Homo sapiens (human) : GHDC (GH3 domain containing)  HGNC  Alliance
Mus musculus (house mouse) : Ghdc (GH3 domain containing)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ghdc (GH3 domain containing)
Pan paniscus (bonobo/pygmy chimpanzee) : GHDC (GH3 domain containing)
Canis lupus familiaris (dog) : GHDC (GH3 domain containing)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ghdc (GH3 domain containing)
Sus scrofa (pig) : GHDC (GH3 domain containing)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01088,672,834 - 88,677,055 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1088,672,843 - 88,677,055 (-)Ensembl
Rnor_5.01088,467,004 - 88,471,225 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41089,703,251 - 89,707,472 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11089,718,111 - 89,720,881 (-)NCBI
Celera1084,409,053 - 84,413,274 (-)NCBICelera
Cytogenetic Map10q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ghdc
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308881
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.