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Gene: Utp18 (UTP18 small subunit processome component) Rattus norvegicus
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Symbol: Utp18
Name: UTP18 small subunit processome component
Description: Predicted to localize to the Pwp2p-containing subcomplex of 90S preribosome; nuclear membrane; and small-subunit processome. Orthologous to human UTP18 (UTP18 small subunit processome component); PARTICIPATES IN ribosome biogenesis pathway; INTERACTS WITH bisphenol A; caffeine; methamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC303456; RGD1309957; similar to Hypothetical WD-repeat protein CGI-48; U3 small nucleolar RNA-associated protein 18 homolog; UTP18 small subunit (SSU) processome component; UTP18 small subunit (SSU) processome component homolog; UTP18 small subunit (SSU) processome component homolog (yeast); UTP18, small subunit (SSU) processome component, homolog; UTP18, small subunit (SSU) processome component, homolog (yeast); UTP18, small subunit processome component; WD repeat domain 50; Wdr50
Orthologs:
Homo sapiens (human) : UTP18 (UTP18 small subunit processome component)  HGNC  Alliance
Mus musculus (house mouse) : Utp18 (UTP18 small subunit processome component)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Utp18 (UTP18 small subunit processome component)
Pan paniscus (bonobo/pygmy chimpanzee) : UTP18 (UTP18 small subunit processome component)
Canis lupus familiaris (dog) : UTP18 (UTP18 small subunit processome component)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Utp18 (UTP18 small subunit processome component)
Sus scrofa (pig) : UTP18 (UTP18 small subunit processome component)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01081,560,929 - 81,588,156 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01081,390,891 - 81,418,112 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41082,515,696 - 82,542,665 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11082,530,315 - 82,557,276 (-)NCBI
Celera1077,608,424 - 77,635,389 (-)NCBICelera
Cytogenetic Map10q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Utp18
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309957
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.