Col7a1 (collagen type VII alpha 1 chain) - Rat Genome Database

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Pathways
Gene: Col7a1 (collagen type VII alpha 1 chain) Rattus norvegicus
Analyze
Symbol: Col7a1
Name: collagen type VII alpha 1 chain
RGD ID: 1311417
Description: Predicted to enable identical protein binding activity. Predicted to be an extracellular matrix structural constituent conferring tensile strength. Predicted to be involved in endodermal cell differentiation and extracellular matrix organization. Predicted to be located in basement membrane. Predicted to be part of collagen trimer. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Human ortholog(s) of this gene implicated in epidermolysis bullosa dystrophica (multiple) and nonsyndromic congenital nail disorder 8. Orthologous to human COL7A1 (collagen type VII alpha 1 chain); PARTICIPATES IN syndecan signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: collagen alpha-1(VII) chain; collagen, type VII, alpha 1; LOC301012; procollagen, type VII, alpha 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28109,604,877 - 109,637,249 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8109,604,861 - 109,637,252 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8115,222,418 - 115,254,812 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08113,421,605 - 113,453,999 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08111,264,400 - 111,296,794 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08117,694,441 - 117,726,844 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,694,605 - 117,726,844 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08117,046,218 - 117,078,589 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,971,207 - 114,003,445 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18113,990,661 - 114,022,897 (+)NCBI
Celera8108,898,754 - 108,930,986 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-tribromophenol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-phenylprop-2-enal  (ISO)
4,4'-sulfonyldiphenol  (ISO)
6-propyl-2-thiouracil  (EXP)
8-Br-cAMP  (ISO)
acetylsalicylic acid  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucose  (ISO)
amitrole  (EXP)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butan-1-ol  (ISO)
C60 fullerene  (EXP)
carbon nanotube  (ISO)
cefaloridine  (EXP)
chlordecone  (ISO)
chloropicrin  (ISO)
clothianidin  (ISO)
clotrimazole  (EXP)
cobalt dichloride  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
cortisol  (ISO)
cyclosporin A  (ISO)
D-glucose  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
diazepam  (ISO)
dichloroacetic acid  (ISO)
dimethylarsinic acid  (ISO)
dimethylselenide  (ISO)
dioxygen  (ISO)
diuron  (EXP)
dorsomorphin  (ISO)
ethanol  (ISO)
folic acid  (ISO)
fucoxanthin  (ISO)
furan  (EXP)
gentamycin  (EXP)
glucose  (ISO)
graphite  (EXP)
indometacin  (ISO)
irinotecan  (ISO)
lead diacetate  (EXP)
manganese(II) chloride  (EXP)
methimazole  (EXP)
methylarsonic acid  (ISO)
methylmercury chloride  (EXP)
nickel atom  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
phenylmercury acetate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
progesterone  (ISO)
quercetin  (ISO)
reactive oxygen species  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
Se-methyl-L-selenocysteine  (ISO)
Se-methylselenocysteine  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
simvastatin  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
sodium fluoride  (ISO)
Soman  (EXP)
streptozocin  (ISO)
succimer  (ISO)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
tributylstannane  (ISO)
triclosan  (ISO)
Triptolide  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. A homozygous insertion-deletion in the type VII collagen gene (COL7A1) in Hallopeau-Siemens dystrophic epidermolysis bullosa. Hilal L, etal., Nat Genet. 1993 Nov;5(3):287-93.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:18757743   PMID:19651211   PMID:21570975   PMID:22664934   PMID:23154389   PMID:23717576  


Genomics

Comparative Map Data
Col7a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28109,604,877 - 109,637,249 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8109,604,861 - 109,637,252 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8115,222,418 - 115,254,812 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08113,421,605 - 113,453,999 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08111,264,400 - 111,296,794 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08117,694,441 - 117,726,844 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,694,605 - 117,726,844 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08117,046,218 - 117,078,589 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,971,207 - 114,003,445 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18113,990,661 - 114,022,897 (+)NCBI
Celera8108,898,754 - 108,930,986 (+)NCBICelera
Cytogenetic Map8q32NCBI
COL7A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38348,564,073 - 48,595,329 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl348,564,073 - 48,595,329 (-)EnsemblGRCh38hg38GRCh38
GRCh37348,601,506 - 48,632,762 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36348,576,510 - 48,607,597 (-)NCBINCBI36Build 36hg18NCBI36
Build 34348,576,509 - 48,607,689NCBI
Celera348,557,241 - 48,588,335 (-)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef348,659,828 - 48,690,843 (-)NCBIHuRef
CHM1_1348,553,813 - 48,584,903 (-)NCBICHM1_1
T2T-CHM13v2.0348,593,030 - 48,624,289 (-)NCBIT2T-CHM13v2.0
Col7a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,782,654 - 108,813,943 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9108,782,654 - 108,813,943 (+)EnsemblGRCm39 Ensembl
GRCm389108,953,586 - 108,984,875 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9108,953,586 - 108,984,875 (+)EnsemblGRCm38mm10GRCm38
MGSCv379108,855,790 - 108,886,920 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369108,810,682 - 108,841,812 (+)NCBIMGSCv36mm8
Celera9108,511,705 - 108,542,813 (+)NCBICelera
Cytogenetic Map9F2NCBI
cM Map959.63NCBI
Col7a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955532650,913 - 681,186 (-)NCBIChiLan1.0ChiLan1.0
COL7A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1348,543,509 - 48,574,722 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0348,485,922 - 48,518,036 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1349,567,831 - 49,599,027 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl349,568,163 - 49,598,919 (-)Ensemblpanpan1.1panPan2
COL7A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12040,519,121 - 40,550,305 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2040,519,378 - 40,552,935 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2040,436,737 - 40,467,232 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02041,004,719 - 41,035,678 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2041,004,749 - 41,038,309 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12040,242,306 - 40,272,806 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02040,647,074 - 40,677,568 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02040,928,007 - 40,958,502 (+)NCBIUU_Cfam_GSD_1.0
Col7a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560263,588,441 - 63,621,451 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936529348,938 - 381,701 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COL7A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11331,262,750 - 31,295,112 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21334,507,211 - 34,539,557 (-)NCBISscrofa10.2Sscrofa10.2susScr3
COL7A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1229,964,652 - 9,996,785 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl229,964,651 - 9,996,626 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041157,089,010 - 157,121,213 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Col7a1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247302,569,510 - 2,599,959 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Col7a1
111 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:201
Count of miRNA genes:124
Interacting mature miRNAs:148
Transcripts:ENSRNOT00000027994
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)846531639119088626Rat
70197BpQTLcluster8Blood pressure QTL cluster 83.482arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)846531639119088626Rat
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)861290298119084929Rat
631653Bp125Blood pressure QTL 1253.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)866142385111142385Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)869349194112783834Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)870513503118219066Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)871888757116888757Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
8694200Abfw4Abdominal fat weight QTL 49.070.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)871888757116888757Rat
8694392Bw161Body weight QTL 1618.060.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)871888757116888757Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)876468691121468691Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)882460758122812818Rat
2313400Anxrr25Anxiety related response QTL 25aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)889265192114019816Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)893535351123900184Rat
1358893Bp263Blood pressure QTL 2635.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
1358903Bp252Blood pressure QTL 25270.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
738014Anxrr15Anxiety related response QTL 153.60.005locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)895718998123900184Rat
2300182Bmd56Bone mineral density QTL 565.4femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)895718998123900184Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8100149864120994388Rat

Markers in Region
AW209154  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28109,637,111 - 109,637,204 (+)MAPPERmRatBN7.2
Rnor_6.08117,726,704 - 117,726,796NCBIRnor6.0
Rnor_5.08117,078,449 - 117,078,541UniSTSRnor5.0
RGSC_v3.48114,003,305 - 114,003,397UniSTSRGSC3.4
Celera8108,930,846 - 108,930,938UniSTS
Cytogenetic Map8q32UniSTS
BI277776  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28109,636,975 - 109,637,170 (+)MAPPERmRatBN7.2
Rnor_6.08117,726,568 - 117,726,762NCBIRnor6.0
Rnor_5.08117,078,313 - 117,078,507UniSTSRnor5.0
RGSC_v3.48114,003,169 - 114,003,363UniSTSRGSC3.4
Celera8108,930,710 - 108,930,904UniSTS
RH 3.4 Map81192.0UniSTS
Cytogenetic Map8q32UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 14
Low 2 21 18 2 19 2 8 11 72 33 20 11 8
Below cutoff 1 22 25 25 25 2 2 7

Sequence


RefSeq Acc Id: ENSRNOT00000027994   ⟹   ENSRNOP00000027994
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,604,861 - 109,637,252 (+)Ensembl
Rnor_6.0 Ensembl8117,694,605 - 117,726,844 (+)Ensembl
RefSeq Acc Id: NM_001106858   ⟹   NP_001100328
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.28109,604,877 - 109,637,249 (+)NCBI
Rnor_6.08117,694,605 - 117,726,844 (+)NCBI
Rnor_5.08117,046,218 - 117,078,589 (+)NCBI
RGSC_v3.48113,971,207 - 114,003,445 (+)RGD
Celera8108,898,754 - 108,930,986 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001100328 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL77130 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001100328   ⟸   NM_001106858
- Peptide Label: precursor
- UniProtKB: D3ZE04 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000027994   ⟸   ENSRNOT00000027994
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZE04-F1-model_v2 AlphaFold D3ZE04 1-2588 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311417 AgrOrtholog
BioCyc Gene G2FUF-29103 BioCyc
Ensembl Genes ENSRNOG00000020579 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000027994 ENTREZGENE
  ENSRNOP00000027994.7 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000027994 ENTREZGENE
  ENSRNOT00000027994.7 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
  3.40.50.410 UniProtKB/TrEMBL
  4.10.410.10 UniProtKB/TrEMBL
InterPro Collagen UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  FN_III UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Kunitz_BPTI UniProtKB/TrEMBL
  Kunitz_BPTI_sf UniProtKB/TrEMBL
  Prtase_inh_Kunz-CS UniProtKB/TrEMBL
  VWF_A UniProtKB/TrEMBL
  vWFA_dom_sf UniProtKB/TrEMBL
KEGG Report rno:301012 UniProtKB/TrEMBL
NCBI Gene 301012 ENTREZGENE
PANTHER COLLAGEN ALPHA UniProtKB/TrEMBL
  COLLAGEN ALPHA-1(XXVII) CHAIN B UniProtKB/TrEMBL
  SCAVENGER RECEPTOR CLASS A MEMBER 3 UniProtKB/TrEMBL
Pfam Collagen UniProtKB/TrEMBL
  fn3 UniProtKB/TrEMBL
  Kunitz_BPTI UniProtKB/TrEMBL
  VWA UniProtKB/TrEMBL
PhenoGen Col7a1 PhenoGen
PRINTS BASICPTASE UniProtKB/TrEMBL
  VWFADOMAIN UniProtKB/TrEMBL
PROSITE BPTI_KUNITZ_1 UniProtKB/TrEMBL
  BPTI_KUNITZ_2 UniProtKB/TrEMBL
  FN3 UniProtKB/TrEMBL
  VWFA UniProtKB/TrEMBL
SMART FN3 UniProtKB/TrEMBL
  VWA UniProtKB/TrEMBL
Superfamily-SCOP FN_III-like UniProtKB/TrEMBL
  SSF53300 UniProtKB/TrEMBL
  SSF57362 UniProtKB/TrEMBL
UniProt A6I397_RAT UniProtKB/TrEMBL
  D3ZE04 ENTREZGENE, UniProtKB/TrEMBL
  R9THZ8_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-07-27 Col7a1  collagen type VII alpha 1 chain  Col7a1  collagen, type VII, alpha 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-07-16 Col7a1  collagen, type VII, alpha 1  Col7a1  procollagen, type VII, alpha 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Col7a1  procollagen, type VII, alpha 1   Col7a1_predicted  procollagen, type VII, alpha 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Col7a1_predicted  procollagen, type VII, alpha 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED