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Gene: Col7a1 (collagen type VII alpha 1 chain) Rattus norvegicus
Symbol: Col7a1
Name: collagen type VII alpha 1 chain
Description: Predicted to have identical protein binding activity. Predicted to be involved in endodermal cell differentiation and growth plate cartilage chondrocyte morphogenesis. Predicted to localize to basement membrane and extracellular space. Human ortholog(s) of this gene implicated in autosomal dominant dystrophic epidermolysis bullosa; epidermolysis bullosa dystrophica; epidermolysis bullosa with congenital localized absence of skin and deformity of nails; nonsyndromic congenital nail disorder 8; and transient bullous dermolysis of the newborn. Orthologous to human COL7A1 (collagen type VII alpha 1 chain); PARTICIPATES IN syndecan signaling pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
Also known as: collagen alpha-1(VII) chain; collagen, type VII, alpha 1; LOC301012; procollagen, type VII, alpha 1
Homo sapiens (human) : COL7A1 (collagen type VII alpha 1 chain)  HGNC  Alliance
Mus musculus (house mouse) : Col7a1 (collagen, type VII, alpha 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col7a1 (collagen type VII alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL7A1 (collagen type VII alpha 1 chain)
Canis lupus familiaris (dog) : COL7A1 (collagen type VII alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col7a1 (collagen type VII alpha 1 chain)
Sus scrofa (pig) : COL7A1 (collagen type VII alpha 1 chain)
Chlorocebus sabaeus (African green monkey) : COL7A1 (collagen type VII alpha 1 chain)
Heterocephalus glaber (naked mole-rat) : Col7a1 (collagen type VII alpha 1 chain)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.08117,694,441 - 117,726,844 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,694,605 - 117,726,844 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08117,046,218 - 117,078,589 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,971,207 - 114,003,445 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18113,990,661 - 114,022,897 (+)NCBI
Celera8108,898,754 - 108,930,986 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Col7a1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311417
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.