Fgl1 (fibrinogen-like 1) - Rat Genome Database

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Gene: Fgl1 (fibrinogen-like 1) Rattus norvegicus
Analyze
Symbol: Fgl1
Name: fibrinogen-like 1
RGD ID: 620169
Description: Predicted to enable identical protein binding activity. Predicted to be involved in several processes, including hepatocyte proliferation; negative regulation of T cell activation; and response to stilbenoid. Predicted to act upstream of or within adipose tissue development; cholesterol metabolic process; and regulation of glucose metabolic process. Predicted to be located in extracellular region. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Orthologous to human FGL1 (fibrinogen like 1); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: fibrinogen-like protein 1; fibrinogen-related protein 1; fibronigen-like protein 1; Frep1; Lfire1; liver fibrinogen-related protein 1; MGC108569
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81657,824,127 - 57,854,413 (+)NCBIGRCr8
mRatBN7.21651,120,652 - 51,150,907 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1651,120,694 - 51,151,093 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1656,440,596 - 56,470,768 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01659,839,687 - 59,869,895 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01655,074,531 - 55,104,703 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01654,153,086 - 54,188,120 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1654,153,054 - 54,188,181 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01653,866,814 - 53,900,250 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41654,434,779 - 54,465,928 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11654,434,853 - 54,465,998 (+)NCBI
Celera1649,015,798 - 49,045,955 (+)NCBICelera
Cytogenetic Map16q12.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fgl1Rathereditary spastic paraplegia 53  ISOFGL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary spastic paraplegia 53ClinVarPMID:28492532

1 to 20 of 122 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fgl1Rat(1->4)-beta-D-glucan multiple interactionsISOFgl1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of FGL1 mRNACTDPMID:36331819
Fgl1Rat1,2-dichloroethane increases expressionISOFgl1 (Mus musculus)6480464ethylene dichloride results in increased expression of FGL1 mRNACTDPMID:28189721 and PMID:28960355
Fgl1Rat17alpha-ethynylestradiol increases expressionISOFgl1 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of FGL1 mRNACTDPMID:17942748
Fgl1Rat17alpha-ethynylestradiol multiple interactionsISOFgl1 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of FGL1 mRNACTDPMID:17942748
Fgl1Rat17beta-estradiol multiple interactionsISOFGL1 (Homo sapiens)6480464[Estradiol co-treated with Progesterone] results in increased expression of FGL1 mRNACTDPMID:20660070
Fgl1Rat17beta-estradiol increases expressionISOFgl1 (Mus musculus)6480464Estradiol results in increased expression of FGL1 mRNACTDPMID:39298647
Fgl1Rat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of FGL1 mRNACTDPMID:32145629
Fgl1Rat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOFgl1 (Mus musculus)64804642 more ...CTDPMID:30294300
Fgl1Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOFgl1 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of FGL1 mRNA and Tetrachlorodibenzodioxin promotes the reaction [AHR protein binds to FGL1 promoter]CTDPMID:17942748 and PMID:19654925
Fgl1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of FGL1 mRNACTDPMID:32109520
Fgl1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOFgl1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of FGL1 mRNACTDPMID:26377647
Fgl1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of FGL1 mRNACTDPMID:21215274
Fgl1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOFgl1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of FGL1 mRNACTDPMID:16611356
Fgl1Rat3,3',5,5'-tetrabromobisphenol A increases expressionISOFGL1 (Homo sapiens)6480464tetrabromobisphenol A results in increased expression of FGL1 proteinCTDPMID:31675489
Fgl1Rat4,4'-sulfonyldiphenol increases expressionISOFgl1 (Mus musculus)6480464bisphenol S results in increased expression of FGL1 mRNACTDPMID:39298647
Fgl1Ratacetamide decreases expressionEXP 6480464acetamide results in decreased expression of FGL1 mRNACTDPMID:31881176
Fgl1Rataflatoxin B1 affects expressionISOFGL1 (Homo sapiens)6480464Aflatoxin B1 affects the expression of FGL1 proteinCTDPMID:20106945
Fgl1Ratall-trans-retinoic acid decreases expressionISOFGL1 (Homo sapiens)6480464Tretinoin results in decreased expression of FGL1 mRNACTDPMID:23724009
Fgl1Ratammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of FGL1 mRNACTDPMID:16483693
Fgl1Ratarsenous acid multiple interactionsISOFGL1 (Homo sapiens)6480464Arsenic Trioxide inhibits the reaction [4-aminophenylarsenoxide binds to FGL1 protein]CTDPMID:26598702

1 to 20 of 122 rows

Biological Process
1 to 16 of 16 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fgl1Ratadaptive immune response involved_inIEAUniProtKB-KW:KW-10641600115GO_REF:0000043UniProtGO_REF:0000043
Fgl1Ratadipose tissue development acts_upstream_of_or_withinISOFgl1 (Mus musculus)1624291MGI:5510996 PMID:23483972RGDPMID:23483972
Fgl1Ratblood coagulation involved_inIEAInterPro:IPR0375791600115GO_REF:0000002InterProGO_REF:0000002
Fgl1Ratcholesterol metabolic process acts_upstream_of_or_withinISOFgl1 (Mus musculus)1624291MGI:5510996 PMID:23483972RGDPMID:23483972
Fgl1Rathepatocyte proliferation involved_inISSUniProtKB:Q088301600115GO_REF:0000024UniProtGO_REF:0000024
Fgl1Rathepatocyte proliferation involved_inIEAUniProtKB:Q08830 and ensembl:ENSP000004019521600115GO_REF:0000107EnsemblGO_REF:0000107
Fgl1Rathepatocyte proliferation involved_inISOFGL1 (Homo sapiens)1624291 PMID:19880967RGDPMID:19880967
Fgl1Ratimmune system process involved_inIEAUniProtKB-KW:KW-03911600115GO_REF:0000043UniProtGO_REF:0000043
Fgl1Ratnegative regulation of T cell activation involved_inISSUniProtKB:Q71KU91600115GO_REF:0000024UniProtGO_REF:0000024
Fgl1Ratnegative regulation of T cell activation involved_inIBAMGI:102795 and PANTHER:PTN0027096481600115GO_REF:0000033GO_CentralGO_REF:0000033
Fgl1Ratnegative regulation of T cell activation involved_inISOFgl1 (Mus musculus)1624291 PMID:30580966RGDPMID:30580966
Fgl1Ratregulation of glucose metabolic process acts_upstream_of_or_withinISOFgl1 (Mus musculus)1624291MGI:5510996 PMID:23483972RGDPMID:23483972
Fgl1Ratregulation of immune response involved_inISSUniProtKB:Q71KU91600115GO_REF:0000024UniProtGO_REF:0000024
Fgl1Ratregulation of immune response involved_inISOFgl1 (Mus musculus)1624291 PMID:30580966RGDPMID:30580966
Fgl1Ratregulation of immune response involved_inIBAMGI:102795 and PANTHER:PTN0027096481600115GO_REF:0000033GO_CentralGO_REF:0000033
Fgl1Ratresponse to stilbenoid involved_inISOFgl1 (Mus musculus)1624291 PMID:17086191RGDPMID:17086191
1 to 16 of 16 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fgl1Ratcollagen-containing extracellular matrix is_active_inIBAMGI:2665790 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Fgl1Ratextracellular region located_inIEAUniProtKB-SubCell:SL-02431600115GO_REF:0000044UniProtGO_REF:0000044
Fgl1Ratextracellular region located_inIEAUniProtKB:Q08830 and ensembl:ENSP000004019521600115GO_REF:0000107EnsemblGO_REF:0000107
Fgl1Ratextracellular region located_inISOFgl1 (Mus musculus)1624291 PMID:30580966RGDPMID:30580966
Fgl1Ratextracellular region located_inIEAUniProtKB-KW:KW-09641600115GO_REF:0000043UniProtGO_REF:0000043
Fgl1Ratextracellular region located_inISOFGL1 (Homo sapiens)1624291 PMID:30580966RGDPMID:30580966
Fgl1Ratextracellular region located_inISSUniProtKB:Q088301600115GO_REF:0000024UniProtGO_REF:0000024
Fgl1Ratextracellular space is_active_inIBAMGI:1888999 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function

  


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Cloning and characterization of a mouse liver-specific gene mfrep-1, up-regulated in liver regeneration. Yan J, etal., Cell Res 2002 Dec;12(5-6):353-61.
PMID:12477932   PMID:17086191   PMID:19880967   PMID:23376485   PMID:23483972   PMID:25901902   PMID:30580966  



Fgl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81657,824,127 - 57,854,413 (+)NCBIGRCr8
mRatBN7.21651,120,652 - 51,150,907 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1651,120,694 - 51,151,093 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1656,440,596 - 56,470,768 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01659,839,687 - 59,869,895 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01655,074,531 - 55,104,703 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01654,153,086 - 54,188,120 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1654,153,054 - 54,188,181 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01653,866,814 - 53,900,250 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41654,434,779 - 54,465,928 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11654,434,853 - 54,465,998 (+)NCBI
Celera1649,015,798 - 49,045,955 (+)NCBICelera
Cytogenetic Map16q12.1NCBI
FGL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38817,864,389 - 17,895,538 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl817,864,380 - 17,910,365 (-)EnsemblGRCh38hg38GRCh38
GRCh37817,721,898 - 17,753,047 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36817,766,180 - 17,797,327 (-)NCBINCBI36Build 36hg18NCBI36
Build 34817,766,181 - 17,797,327NCBI
Celera816,687,655 - 16,718,923 (-)NCBICelera
Cytogenetic Map8p22NCBI
HuRef816,265,901 - 16,296,907 (-)NCBIHuRef
CHM1_1817,923,349 - 17,954,500 (-)NCBICHM1_1
T2T-CHM13v2.0818,131,895 - 18,183,454 (-)NCBIT2T-CHM13v2.0
Fgl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39841,644,471 - 41,671,015 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl841,644,471 - 41,668,193 (-)EnsemblGRCm39 Ensembl
GRCm38841,191,434 - 41,217,978 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl841,191,434 - 41,215,156 (-)EnsemblGRCm38mm10GRCm38
MGSCv37842,276,788 - 42,300,510 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36842,690,251 - 42,713,941 (-)NCBIMGSCv36mm8
Celera843,821,071 - 43,843,765 (-)NCBICelera
Cytogenetic Map8A4NCBI
cM Map823.89NCBI
Fgl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555521,783,412 - 1,813,935 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555521,784,046 - 1,813,935 (+)NCBIChiLan1.0ChiLan1.0
FGL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2736,338,681 - 36,384,278 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1812,065,166 - 12,109,854 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0817,083,524 - 17,128,152 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1814,035,855 - 14,066,956 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl814,035,855 - 14,066,956 (-)Ensemblpanpan1.1panPan2
FGL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11641,161,314 - 41,191,282 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1641,161,394 - 41,179,791 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1641,670,263 - 41,700,258 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01643,219,744 - 43,249,744 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1643,219,761 - 43,249,700 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11641,312,415 - 41,342,403 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01641,856,289 - 41,887,835 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01642,051,073 - 42,081,082 (-)NCBIUU_Cfam_GSD_1.0
Fgl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494338,141,295 - 38,174,859 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936614431,631 - 450,034 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936614431,537 - 452,174 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl175,547,126 - 5,576,790 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1175,546,931 - 5,596,434 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2176,073,405 - 6,099,351 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FGL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1815,962,625 - 16,016,118 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl815,962,053 - 15,982,336 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605226,283,462 - 26,314,767 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fgl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476921,308,280 - 21,350,026 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476921,308,319 - 21,350,026 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Fgl1
114 total Variants

Predicted Target Of
Summary Value
Count of predictions:17
Count of miRNA genes:17
Interacting mature miRNAs:17
Transcripts:ENSRNOT00000014248
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 16 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)163775215682752156Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)163528887080288870Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164239634584729064Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)162432551369325513Rat
1298529Arunc1Aerobic running capacity QTL 14exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)163195152060148445Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat

1 to 10 of 16 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
4 8 13 45 79 84 53 17 53 6 135 43 29 27 37 31



Ensembl Acc Id: ENSRNOT00000014248   ⟹   ENSRNOP00000014248
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1651,120,694 - 51,150,905 (+)Ensembl
Rnor_6.0 Ensembl1654,153,086 - 54,188,118 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000090644   ⟹   ENSRNOP00000073912
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1651,120,694 - 51,151,093 (+)Ensembl
Rnor_6.0 Ensembl1654,153,054 - 54,188,181 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000090763   ⟹   ENSRNOP00000075300
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1651,120,694 - 51,147,104 (+)Ensembl
Rnor_6.0 Ensembl1654,164,431 - 54,184,559 (+)Ensembl
RefSeq Acc Id: NM_172010   ⟹   NP_742007
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81657,824,200 - 57,854,408 (+)NCBI
mRatBN7.21651,120,694 - 51,150,907 (+)NCBI
Rnor_6.01654,153,086 - 54,188,120 (+)NCBI
Rnor_5.01653,866,814 - 53,900,250 (+)NCBI
RGSC_v3.41654,434,779 - 54,465,928 (+)RGD
Celera1649,015,798 - 49,045,955 (+)RGD
Sequence:
RefSeq Acc Id: XM_039094195   ⟹   XP_038950123
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81657,824,127 - 57,854,413 (+)NCBI
mRatBN7.21651,120,652 - 51,150,811 (+)NCBI
1 to 9 of 9 rows
Protein RefSeqs NP_742007 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950123 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH88107 (Get FASTA)   NCBI Sequence Viewer  
  AAM34682 (Get FASTA)   NCBI Sequence Viewer  
  EDL78830 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000014248
  ENSRNOP00000014248.7
  ENSRNOP00000073912
GenBank Protein Q5M8C6 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_742007   ⟸   NM_172010
- Peptide Label: precursor
- UniProtKB: Q5M8C6 (UniProtKB/Swiss-Prot),   A6JPU2 (UniProtKB/TrEMBL),   Q8K583 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000073912   ⟸   ENSRNOT00000090644
Ensembl Acc Id: ENSRNOP00000075300   ⟸   ENSRNOT00000090763
Ensembl Acc Id: ENSRNOP00000014248   ⟸   ENSRNOT00000014248
RefSeq Acc Id: XP_038950123   ⟸   XM_039094195
- Peptide Label: isoform X1
- UniProtKB: A0A8L2R9U7 (UniProtKB/TrEMBL),   Q8K583 (UniProtKB/TrEMBL)
Fibrinogen C-terminal

Name Modeler Protein Id AA Range Protein Structure
AF-Q5M8C6-F1-model_v2 AlphaFold Q5M8C6 1-314 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13700118
Promoter ID:EPDNEW_R10641
Type:initiation region
Name:Fgl1_1
Description:fibrinogen-like 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01654,153,086 - 54,153,146EPDNEW


1 to 30 of 30 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-11258 BioCyc
Ensembl Genes ENSRNOG00000010714 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000014248 ENTREZGENE
  ENSRNOT00000014248.7 UniProtKB/Swiss-Prot
  ENSRNOT00000090644 ENTREZGENE
Gene3D-CATH 3.90.215.10 UniProtKB/Swiss-Prot
  Gamma-fibrinogen Carboxyl Terminal Fragment, domain 2 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7368731 IMAGE-MGC_LOAD
InterPro Fibrinogen UniProtKB/Swiss-Prot
  Fibrinogen-like_C UniProtKB/Swiss-Prot
  Fibrinogen_a/b/g_C_1 UniProtKB/Swiss-Prot
  Fibrinogen_a/b/g_C_dom UniProtKB/Swiss-Prot
  Fibrinogen_CS UniProtKB/Swiss-Prot
KEGG Report rno:246186 UniProtKB/Swiss-Prot
MGC_CLONE MGC:108569 IMAGE-MGC_LOAD
NCBI Gene 246186 ENTREZGENE
PANTHER FIBRINOGEN ALPHA CHAIN UniProtKB/Swiss-Prot
  FIBRINOGEN LIKE 1A UniProtKB/Swiss-Prot
Pfam Fibrinogen_C UniProtKB/Swiss-Prot
PhenoGen Fgl1 PhenoGen
PROSITE FIBRINOGEN_C_1 UniProtKB/Swiss-Prot
  FIBRINOGEN_C_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000010714 RatGTEx
SMART FBG UniProtKB/Swiss-Prot
Superfamily-SCOP SSF56496 UniProtKB/Swiss-Prot
UniProt A0A0G2KA83_RAT UniProtKB/TrEMBL
  A0A8L2R9U7 ENTREZGENE, UniProtKB/TrEMBL
  A6JPU2 ENTREZGENE, UniProtKB/TrEMBL
  FGL1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q8K583 ENTREZGENE, UniProtKB/TrEMBL
1 to 30 of 30 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-19 Fgl1  fibrinogen-like 1  Fgl1  fibronigen-like protein 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-12-14 Fgl1  fibronigen-like protein 1      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Fgl1  fibronigen-like protein 1      Symbol and Name status set to provisional 70820 PROVISIONAL