Arunc1 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Arunc1 (Aerobic running capacity QTL 1) Rattus norvegicus

Symbol: Arunc1
Name: Aerobic running capacity QTL 1
RGD ID: 1298529
Previously known as: Arc1
Trait: exercise endurance trait   (VT:0002332)    
Measurement Type: maximum distance run on treadmill   (CMO:0001406)    
LOD Score: 4.0
P Value: Not Available
Variance: Not Available
Inheritance Type: dominant
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21631,951,520 - 60,148,445RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01635,307,110 - 63,909,364RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01635,126,908 - 63,570,711RGDRnor5.0
RGSC_v3.41635,339,929 - 63,977,788RGDRGSC3.4
RGSC_v3.11635,340,004 - 63,977,863RGD
Cross Type: intercross
Strains Crossed: COP/OlaHsd DA/OlaHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Acsl1 is a candidate Gene for Arunc1
Adrb3 is a candidate Gene for Arunc1
Npy5r is a candidate Gene for Arunc1
Irs2 is a candidate Gene for Arunc1
Pdlim3 is a candidate Gene for Arunc1
Ppif is a candidate Gene for Arunc1
Tm2d2 is a candidate Gene for Arunc1

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
COP/OlaHsd  (IEA)
DA/OlaHsd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Gene Expression Profiling of the Left Ventricles in a Rat Model of Intrinsic Aerobic Running Capacity. Lee SJ, etal., Physiol Genomics 2005 Jul 20;.
2. A genome scan for Loci associated with aerobic running capacity in rats. Ways JA, etal., Genomics 2002 Jul;80(1):13-20.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
71068Fgf20fibroblast growth factor 20165203054952038201Rat
67382Klkb1kallikrein B1164695863446982054Rat
3381Ppp2cbprotein phosphatase 2 catalytic subunit beta165855811958579325Rat
69291Hmgb2high mobility group box 2163271065132713230Rat
2015Acsl1acyl-CoA synthetase long-chain family member 1164575524645821541Rat
620362Galnt7polypeptide N-acetylgalactosaminyltransferase 7163257864332703189Rat
621229Glra3glycine receptor, alpha 3163419993734848773Rat
621341Nrg1neuregulin 1165925065860304519Rat
620901Pcm1pericentriolar material 1165100831551105261Rat
628681Zdhhc2zinc finger DHHC-type palmitoyltransferase 2165180846551878060Rat
621747Gsrglutathione-disulfide reductase165848220958525256Rat
631381Mtus1microtubule associated scaffold protein 1165120249751347794Rat
621600Ppp1r3bprotein phosphatase 1, regulatory subunit 3B165683001156842395Rat
621254Fat1FAT atypical cadherin 1164717725347296261Rat
620427Pdlim3PDZ and LIM domain 3164635246046383680Rat
708530Cyp4v3cytochrome P450, family 4, subfamily v, polypeptide 3164691792946958735Rat
621207Hand2heart and neural crest derivatives expressed 2163291744832920791Rat
68387Slc7a2solute carrier family 7 member 2165141747851470784Rat
619800Vegfcvascular endothelial growth factor C163771225137827845Rat
1304922Irf2interferon regulatory factor 2164543921545550054Rat
1304810Trmt9btRNA methyltransferase 9B (putative)165574055155792198Rat
1307052Adam34la disintegrin and metalloprotease domain 34-like164853645648542246Rat
735171Tlr3toll-like receptor 3164682198046837900Rat
1303065Spata4spermatogenesis associated 4163721380937223169Rat
620061Sorbs2sorbin and SH3 domain containing 2164643522046748743Rat
1303011Sarafstore-operated calcium entry-associated regulatory factor165801723158035481Rat
620625Dusp4dual specificity phosphatase 4165737665957398161Rat
620352Slc25a4solute carrier family 25 member 4164607293546076730Rat
620797Mtnr1amelatonin receptor 1A164714446147163919Rat
620087Hpgd15-hydroxyprostaglandin dehydrogenase163398626534024228Rat
631368Gpm6aglycoprotein m6a163664128236973377Rat
1303318Tusc3tumor suppressor candidate 3165319619553345241Rat
68377Scrg1stimulator of chondrogenesis 1163276002832788299Rat
1306023Ubxn8UBX domain protein 8165853608658557684Rat
1305088Purgpurine-rich element binding protein G165873232758763356Rat
1306608Mtmr7myotubularin related protein 7165164126751732212Rat
1307347Ing2inhibitor of growth family, member 2164457359244584180Rat
1307325Cfap97cilia and flagella associated protein 97164608610446135194Rat
620169Fgl1fibrinogen-like 1165112065251150907Rat
1307168Leprotl1leptin receptor overlapping transcript-like 1165804093458053602Rat
1307596Fbxo8F-box protein 8163366530533711215Rat
1308517Cep44centrosomal protein 44163371154833733226Rat
1305896Lrp2bpLrp2 binding protein164624155446269221Rat
1306641Tenm3teneurin transmembrane protein 3164125190943978594Rat
1307788Sgczsarcoglycan zeta165366028354740811Rat
1305337Triml1tripartite motif family-like 1164899496849005343Rat
1311645Enpp6ectonucleotide pyrophosphatase/phosphodiesterase 6164516588345294126Rat
1308028Pdgfrlplatelet-derived growth factor receptor-like165134792951407850Rat
1308378Eri1exoribonuclease 1165672410156744228Rat
1559427Wwc2WW and C2 domain containing 2164425837244421815Rat
621568Asah1N-acylsphingosine amidohydrolase 1165096640450997827Rat
1560302Erh-ps2ERH, mRNA splicing and mitosis factor, pseudogene 2164463136644632601Rat
1559501Adam26aa disintegrin and metallopeptidase domain 26A164860099848608314Rat
1309001Cldn23claudin 23165641367756415401Rat
1309646Agaaspartylglucosaminidase163850466138516607Rat
1309364F11coagulation factor XI164698798847009015Rat
1307549Dctn6dynactin subunit 6165807759558096604Rat
1310150Snx25sorting nexin 25164613455246238471Rat
1310562Neil3nei-like DNA glycosylase 3163835930538418528Rat
1305302Cdkn2aipCDKN2A interacting protein164453614744546216Rat
1305313Cnot7CCR4-NOT transcription complex, subunit 7165177541651794581Rat
1308784Tnkstankyrase165722317457370740Rat
1310134Gtf2e2general transcription factor IIE subunit 2165839930758449467Rat
1308812Mfhas1multifunctional ROCO family signaling regulator 1165654546256633649Rat
1305271Cldn22claudin 22164442234444423370Rat
1309765Trappc11trafficking protein particle complex subunit 11164473316944779324Rat
1359671DctddCMP deaminase164406695244098654Rat
1559626Atp5hl1ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d-like 1164862834948628948Rat
1561067RbpmsRNA binding protein, mRNA processing factor165823937058395424Rat
1564788WrnWRN RecQ like helicase165876351758898604Rat
1563097Rps15al5ribosomal protein S15A-like 5165890777058908201Rat
1564316Msr1macrophage scavenger receptor 1165271777552803602Rat
1563411Micu3mitochondrial calcium uptake family, member 3165191985952010705Rat
1560016Vps37aVPS37A subunit of ESCRT-I165173617051775384Rat
1563604Ptrh2-ps1peptidyl-tRNA hydrolase 2, pseudogene 1164787217247872720Rat
1564073Helthelt bHLH transcription factor164599122745993045Rat
1565715Ankrd37ankyrin repeat domain 37164626893346271971Rat
1560512Rps25-ps6ribosomal protein S25, pseudogene 6165859778758598207Rat
1564308Cfap96cilia and flagella associated protein 96164629107546315616Rat
1564132Rwdd4RWD domain containing 4164471469844733090Rat
1560648Park7-ps2Parkinsonism associated deglycase, pseudogene 2163972891039729268Rat
1311266Tex15testis expressed 15, meiosis and synapsis associated165859899158659005Rat
1562119Primpolprimase and DNA directed polymerase164568125245715758Rat
1309066Adam24ADAM metallopeptidase domain 24165157827851584265Rat
1564773Galntl6polypeptide N-acetylgalactosaminyltransferase-like 6163119288032443979Rat
1562043Cldn24claudin 24164442481044425472Rat
708477Stox2storkhead box 2164484817945087238Rat
1311793Prag1PEAK1 related kinase activating pseudokinase 1165608788556141153Rat
1311161Ufsp2UFM1-specific peptidase 2164627201646291080Rat
1586153Fam149afamily with sequence similarity 149, member A164685537746914553Rat
1585878Kics2-ps1KICSTOR subunit 2, pseudogene 1163888932438893550Rat
68416Dlc1DLC1 Rho GTPase activating protein165524671655671441Rat
1587353Ndufaf7-ps1NADH:ubiquinone oxidoreductase complex assembly factor 7, pseudogene 1164461422644615701Rat
1587354Zmynd8-ps2zinc finger, MYND-type containing 8, pseudogene 2163935163639353314Rat
1585243C16h8orf48similar to human chromosome 8 open reading frame 48165524474455246642Rat
1585256Vdac1-ps4voltage-dependent anion channel 1, pseudogene 4165511540855116384Rat
1585819Hdac1-ps7Histone deacetylase 1, pseudogene 7164025972540299510Rat
2275Casp3caspase 3164566291045681171Rat
1565973Asb5ankyrin repeat and SOCS box-containing 5163723786937305207Rat
1562566Cenpucentromere protein U164571582145739038Rat
1566335Mboat4membrane bound O-acyltransferase domain containing 4165806417858077523Rat
1562583Lonrf1LON peptidase N-terminal domain and ring finger 1165598457256015156Rat
1565382Triml2tripartite motif family-like 2164894471248960949Rat
1583491Gapdh-ps100Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 100164641375346414771Rat
1564538Ccdc110coiled-coil domain containing 110164631574546337050Rat
1565245Hist1h2bc-ps1histone cluster 1, H2bc, pseudogene 1165594090755950046Rat
1565331Rcn1-ps15reticulocalbin 1, pseudogene 15163566327435664803Rat
1588595Zfp148-ps1zinc finger protein 148, pseudogene 1165305519853057088Rat
1588596Aldoa-ps1aldolase, fructose-bisphosphate A, pseudogene 1164749076147492204Rat
1588597Eno1-ps26enolase 1, pseudogene 26163310288533103912Rat
1587863Snrpc-ps1small nuclear ribonucleoprotein polypeptide C, pseudogene 1164891588248918885Rat
1590843Wdr17WD repeat domain 17163705992337191125Rat
1590852Rps17-ps6ribosomal protein S17, pseudogene 6165813384558134324Rat
1590853Eif2s1-ps3eukaryotic translation initiation factor 2 subunit alpha, pseudogene 3165440093254401861Rat
1590854Rps3-ps5ribosomal protein S3, pseudogene 5165264188552642629Rat
1589656Tuba1b-ps9tubulin, alpha 1B, pseudogene 9164695173246954254Rat
1589657Pnn-ps1pinin, desmosome associated protein, pseudogene 1163686334336867784Rat
1589057Calcoco2-ps1calcium binding and coiled-coil domain 2, pseudogene 1164859537948600523Rat
1589040Adam34a disintegrin and metallopeptidase domain 34164855738548561744Rat
1586989Pabpc1-ps1poly(A) binding protein, cytoplasmic 1, pseudogene 1163888665038889188Rat
1585495Frg1FSHD region gene 1165092578350946661Rat
1584050Hmgb1-ps8high-mobility group box 1, pseudogene 8163402848734030715Rat
1586634Gemin8-ps7gem (nuclear organelle) associated protein 8, pseudogene 7165058814950588849Rat
1588184Spcs3signal peptidase complex subunit 3163730535837310792Rat
1589009Edf1-ps4endothelial differentiation-related factor 1, pseudogene 4164848871248489307Rat
1592034Rpl4-ps3ribosomal protein L4, pseudogene 3164565621045657689Rat
1595671Riox2-ps4ribosomal oxygenase 2, pseudogene 4163387273633874163Rat
1591754Esf1-ps1ESF1 nucleolar pre-rRNA processing protein, pseudogene 1163417872634180443Rat
1596928Tgap1l7GTPase activating protein testicular GAP1 like 7163595351535983016Rat
1593988Baz2a-ps1bromodomain adjacent to zinc finger domain, 2A, pseudogene 1164898277748989498Rat
1596879Atpaf2-ps1ATP synthase mitochondrial F1 complex assembly factor 2, pseudogene 1165912763159128475Rat
1595501Sap30Sin3A associated protein 30163274777732753114Rat
1594133Pebp1-ps1phosphatidylethanolamine binding protein 1, pseudogene 1163321569833216689Rat
1596760Rps15a-ps8ribosomal protein S15a, pseudogene 8164417052644170972Rat
1597769Ptmal4prothymosin alpha like 4164529538245307996Rat
1597747Ndufa3-ps1NADH:ubiquinone oxidoreductase subunit A3, pseudogene 1164536942845369682Rat
2319133Zfp42zinc finger protein 42164883646348845443Rat
2318769LOC100362114hypothetical LOC100362114163537080335372808Rat
2319506Elf2-ps1E74 like ETS transcription factor 2, pseudogene 1163492501134938009Rat
2322528Ddx18-ps1DEAD-box helicase 18, pseudogene 1165422270054227080Rat
2321133Sri-ps1sorcin, pseudogene 1165590642855907035Rat
2322723Smad2-ps1SMAD family member 2, pseudogene 1165313646653137333Rat
2324291Kansl2-ps3KAT8 regulatory NSL complex subunit 2, pseudogene 3163801742638018649Rat
2325533Mir383microRNA 383165404034054040413Rat
6486900Pym1-ps3PYM homolog 1, exon junction complex associated factor, pseudogene 3163625509336255686Rat
6489169Gnb1-ps2G protein subunit beta 1, pseudogene 2165278833152790166Rat
6490582Rabif-ps1RAB interacting factor, pseudogene 1165798334257983697Rat
6491257Hprt1-ps1hypoxanthine phosphoribosyltransferase 1, pseudogene 1163584100635841628Rat
6494993Ptp4a1-ps3protein tyrosine phosphatase 4A1, pseudogene 3163587531935877346Rat
6495615Adam25a disintegrin and metallopeptidase domain 25165148876451492790Rat
6499367LOC100910324uncharacterized LOC100910324163658356636601503Rat
6499950Adam21ADAM metallopeptidase domain 21163662532436627657Rat
6499975Lrpl1LDL receptor related protein like 1165642214556471368Rat
6500448Tufm-ps1Tu translation elongation factor, mitochondrial, pseudogene 1165643746656439103Rat
6501537Smim18small integral membrane protein 18165843170958439372Rat
7540575LOC102551022uncharacterized LOC102551022164419602144205176Rat
7540925LOC102547380uncharacterized LOC102547380165088885450901635Rat
7507107LOC102549910uncharacterized LOC102549910163791900937957322Rat
7530546LOC102554462uncharacterized LOC102554462164795427547989673Rat
7538198LOC102553008uncharacterized LOC102553008164590194245914770Rat
7633194LOC102551895uncharacterized LOC102551895164533044745337282Rat
7630189Ube2e3-ps2ubiquitin-conjugating enzyme E2E 3, pseudogene 2165579978155800464Rat
7589768LOC102552468uncharacterized LOC102552468165634883456370705Rat
7594186LOC102551260uncharacterized LOC102551260164449135344497591Rat
7619887LOC102552290uncharacterized LOC102552290164544824545462686Rat
7561344LOC102547443uncharacterized LOC102547443165093531350966211Rat
7580994LOC102551690uncharacterized LOC102551690164480445644810885Rat
7584717LOC102553697uncharacterized LOC102553697165706374857091262Rat
7553804LOC102553369uncharacterized LOC102553369165677155156787029Rat
7688695LOC102552563uncharacterized LOC102552563164398378543991280Rat
7701467LOC102548719uncharacterized LOC102548719163281406532816888Rat
9159214LOC10369397860S ribosomal protein L9-like165742942857430476Rat
9114442LOC10369424260S ribosomal protein L7 pseudogene163299528132996164Rat
9201979LOC103693968uncharacterized LOC103693968165124481851256450Rat
9126708LOC10369396560S ribosomal protein L7 pseudogene165056549150566233Rat
9216280LOC103693975uncharacterized LOC103693975165710271057115093Rat
9350183LOC103693955mitochondrial import receptor subunit TOM20 homolog pseudogene164062441040624826Rat
9269843LOC103693946uncharacterized LOC103693946163290793832910025Rat
9368194LOC103693959uncharacterized LOC103693959164512509845180386Rat
9999338Rps27a-ps15ribosomal protein S27a, pseudogene 15164959036749590926Rat
9999339Rps27a-ps16ribosomal protein S27a, pseudogene 16165003563450036049Rat
11373421LOC108348402uncharacterized LOC108348402165549336255508311Rat
11444080LOC108353100peptidyl-prolyl cis-trans isomerase A pseudogene164114352941144012Rat
11444389LOC108353084glyceraldehyde-3-phosphate dehydrogenase pseudogene163296322632965216Rat
11444868Rpl23-ps1ribosomal protein L23,pseudogene 1164888529148885721Rat
11366572LOC108353101glyceraldehyde-3-phosphate dehydrogenase pseudogene164593892345943631Rat
11372709LOC108353112uncharacterized LOC108353112165374435553809921Rat
11383954LOC108353114glyceraldehyde-3-phosphate dehydrogenase pseudogene163526361035265145Rat
11411172LOC108348398uncharacterized LOC108348398164763321647650775Rat
11380833Trnae-uuc9transfer RNA glutamic acid (anticodon UUC) 9163276277232762843Rat
11480995Gapdh-ps27Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 27165339106453392063Rat
11489697LOC108351592uncharacterized LOC108351592163586018735901217Rat
11492380LOC108348397uncharacterized LOC108348397164582156945837350Rat
41167470LOC120097575uncharacterized LOC120097575164487462344880702Rat
41168026LOC120097631U6atac minor spliceosomal RNA164640181646401933Rat
41203672Pcbp4-ps3poly(rC) binding protein 4, pseudogene 3163559446935595438Rat
41355369LOC120097544uncharacterized LOC120097544165397301253982699Rat
41355498LOC120097371uncharacterized LOC120097371165924263459251923Rat
41113289Hmgb1-ps28high-mobility group box 1, pseudogene 28164874559648746342Rat
41205149LOC120097655U6 spliceosomal RNA163665309536653200Rat
41383168LOC120097446uncharacterized LOC120097446164416121244164003Rat
41140865Trnaa-agc85transfer RNA alanine (anticodon AGC) 85163790152437901605Rat
41141043LOC120097661U6 spliceosomal RNA164948311249483211Rat
41279863LOC120097491uncharacterized LOC120097491163990142039904916Rat
41285393LOC120097541uncharacterized LOC120097541163630240236307708Rat
41325054LOC120097659U6 spliceosomal RNA163916815439168255Rat
41207158LOC120097372uncharacterized LOC120097372165953674259548468Rat
41253835LOC120097468uncharacterized LOC120097468165637070956374687Rat
41327122LOC120097669U7 small nuclear RNA163854055538540616Rat
41362298Naa11-ps20N(alpha)-acetyltransferase 11, NatA catalytic subunit, pseudogene 20163598438335985085Rat
41118380LOC120097473uncharacterized LOC120097473163663464836659417Rat
41260400LOC120097373uncharacterized LOC120097373164642924046438631Rat
41329707LOC120097644U6 spliceosomal RNA164804191948042025Rat
41362756LOC120097427uncharacterized LOC120097427165128400351290733Rat
41330846LOC120097405uncharacterized LOC120097405164188914641899831Rat
41364685Pym1-ps11PYM homolog 1, exon junction complex associated factor, pseudogene 11163564611935646695Rat
41365690Elob-ps1elongin B, pseduogene 1165137549251380114Rat
41097190LOC120097647U6 spliceosomal RNA165817347258173578Rat
41097200LOC120097602small nucleolar RNA SNORA17163374828033748411Rat
41264711LOC120097553pancreatic progenitor cell differentiation and proliferation factor-like163769834737698581Rat
41342762LOC120097666U7 small nuclear RNA165740486757404926Rat
41097846LOC120097474uncharacterized LOC120097474165681295956816099Rat
41154096LOC120097486uncharacterized LOC120097486165091103650924771Rat
41180056LOC120097435uncharacterized LOC120097435164680461246813785Rat
41266011LOC120097469uncharacterized LOC120097469165650165556508261Rat
41268023LOC120097649U6 spliceosomal RNA163317989333179999Rat
41369722Rpl10a-ps10ribosomal protein L10A, pseudogene 10165313477053135584Rat
41396311Rcn1-ps9reticulocalbin 1, pseudogene 9163623890436239854Rat
41125224LOC120097374uncharacterized LOC120097374164660853746610271Rat
41290435LOC120097494uncharacterized LOC120097494165847590258488564Rat
41398591LOC120097417uncharacterized LOC120097417164588546545891183Rat
41219742LOC120097472uncharacterized LOC120097472165666140856710374Rat
41292406LOC120097420uncharacterized LOC120097420164596851945974350Rat
41196543LOC120097600small nucleolar RNA SNORA17163829999438300125Rat
41351695LOC120097422uncharacterized LOC120097422163258156632612495Rat
41083644LOC120097641U4 spliceosomal RNA163363024933630336Rat
41108070LOC120097672small nucleolar RNA SNORA70164481066844810803Rat
41231906Trnav-aac21transfer RNA valine (anticodon AAC) 21163649714136497213Rat
41085564LOC120097625small nucleolar RNA SNORA26164588255245882683Rat
40946287LOC120097653U6 spliceosomal RNA164616119046161295Rat
40947202Ube2v1-ps3ubiquitin conjugating enzyme E2 V1, pseudogene 3164551413945514882Rat
41011644LOC120097492uncharacterized LOC120097492165815983258164364Rat
40948478LOC120097416uncharacterized LOC120097416164588353645886632Rat
40949490LOC120097410uncharacterized LOC120097410164533760745339067Rat
40973434Rpl21-ps23ribosomal protein L21, pseudogene 23165691489556918873Rat
40973435LOC1200976395S ribosomal RNA163657817336578291Rat
40975017LOC120097385uncharacterized LOC120097385164555781545634329Rat
40926223LOC120097589small nucleolar RNA SNORA29165815097558151119Rat
40956051LOC120097606small nucleolar RNA SNORA17164323777243237902Rat
41001752LOC120097493uncharacterized LOC120097493165838435558393888Rat
41002418LOC120097428uncharacterized LOC120097428165129541951301207Rat
41003768LOC120097593small nucleolar RNA SNORA48163270546332705605Rat
40933446LOC120097648U6 spliceosomal RNA163743231037432413Rat
40961205Pym1-ps12PYM homolog 1, exon junction complex associated factor, pseudogene 12163629928136299876Rat
40987971LOC120097587small nucleolar RNA SNORA2/SNORA34 family165800164758001782Rat
41008204LOC120097660U6 spliceosomal RNA165820278258202883Rat
41009377Mif-ps4macrophage migration inhibitory factor, pseudogene 4164405798844058997Rat
40943334LOC120097630U2 spliceosomal RNA165460551654605717Rat
41047665Trnat-agu36transfer RNA threonine (anticodon AGU) 36164600166546001745Rat
41245709LOC120097496uncharacterized LOC120097496165876431558781404Rat
41246384LOC120097484uncharacterized LOC120097484165741833657422404Rat
41247947LOC120097466uncharacterized LOC120097466163584879635855983Rat
41029514LOC120097547uncharacterized LOC120097547165379065553822441Rat
41055381LOC120097637U4 spliceosomal RNA165298005752980188Rat
41257946Ncor1-ps1nuclear receptor co-repressor 1, pseudogene 1164867287348673861Rat
41335540LOC120097451uncharacterized LOC120097451165608045856083734Rat
41032360LOC120097620small nucleolar RNA SNORA17165335586353355986Rat
41224531LOC120097448uncharacterized LOC120097448165569594055709767Rat
41336930LOC120097590U11 spliceosomal RNA164213117342131306Rat
41225748LOC120097413uncharacterized LOC120097413165048751250503637Rat
41063175LOC120097622small nucleolar RNA SNORA17163914552939145633Rat
41064674LOC120097487uncharacterized LOC120097487165639585856401150Rat
41039845LOC120097421uncharacterized LOC120097421163260078032636371Rat
41305805LOC120097598small nucleolar RNA SNORA17164667983146679962Rat
41067752LOC120097642U6 spliceosomal RNA165208750252087608Rat
41022210LOC120097546uncharacterized LOC120097546165383921353840224Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10841D16Wox13118164697584246975959Ratregion
10842D16Mgh5148164697580146975965Ratregion
34007D16Mit3144164423590444236047Ratregion
34066D16Mgh1236164302484243025077Ratregion
34553D16Mgh6100164586839745868497Ratregion
35280D16Rat19233163195152031951755Ratregion
37054D16Rat17161165016582850166018Ratregion
37766D16Rat46213163756166437561877Ratregion
37820D16Rat28237165651345656513678Ratregion
34894D16Rat29139164605335446053497Ratregion
35024D16Rat1173163722727437227441Ratregion
35026D16Rat3169164197656441976726Ratregion
35861D16Rat4167163260283132602998Ratregion
39642D16Rat63200165875570558755903Ratregion
39776D16Rat72188163956806339568262Ratregion
39838D16Rat109202166014824360148445Ratregion
39920D16Rat70200163326116533261371Ratregion
39936D16Rat96201164700891247009115Ratregion
40416D16Rat10498163783974637839826Ratregion
40450D16Rat103172163716730337167473Ratregion
40524D16Rat67254164682540246825624Ratregion
40742D16Rat71200163994411839944324Ratregion
38712D16Rat50249164187770241877941Ratregion
40030D16Rat98144164729970747299837Ratregion
40166D16Rat65171165805880458058953Ratregion
40320D16Rat66132165778880357788938Ratregion
38888D16Rat45245164524214945242380Ratregion
38938D16Rat40206165673363456733837Ratregion
38988D16Rat27202165769414657694345Ratregion
39390D16Rat64221165571108755711306Ratregion
42028D16Arb8115164586837445868494Ratregion
41526D16Rat62173165534091555341087Ratregion
43070D16Rat118239163776560837765831Ratregion
43072D16Rat116215164897251248972724Ratregion
43073D16Rat114239165649778656498005Ratregion
42410D16Rat129215164524119245241409Ratregion
40820D1Rat310224165752881057529045Ratregion
41034D16Rat95209165353399053534189Ratregion
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60524D6Got198149163766737937667530Ratregion
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45353D16Got39279164774362547743901Ratregion
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67810D16Uwm1188163498603834986252Ratregion
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66392D16Mco7163164765272447652862Ratregion
1578828D18Chm16170164838145748381490Ratregion
1630081D16Got105264164423337944233637Ratregion
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2315208D16Nkg45295165557908055579375Ratregion
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2315318D16Nkg9215164359990643600121Ratregion
2315320D16Nkg88300165896859558968897Ratregion
2315324D16Nkg56314165564798055648294Ratregion
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2315330D16Nkg31177164534255245342731Ratregion
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2315336D16Nkg1171164331048043310653Ratregion
2315338D16Nkg8207164359445643594666Ratregion
2315342D16Nkg16118164394708143947199Ratregion
2315344D16Nkg48339165552249255522831Ratregion
2315346D16Nkg76254165762169357621945Ratregion
2315350D16Nkg57210165567355755673767Ratregion
2315352D16Nkg30209164533562345335827Ratregion
2315354D16Nkg62193165602729856027491Ratregion
2315356D16Nkg89169165912281859122987Ratregion
2315358D16Nkg6158164357406743574225Ratregion
2315360D16Nkg20193164414292344143116Ratregion
2315362D16Nkg23137164458423144584368Ratregion
2315364D16Nkg77149165765131557651464Ratregion
2315366D16Nkg50288165559840155598689Ratregion
2315370D16Nkg60269165590508955905358Ratregion
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2315374D16Nkg51306165561362455613930Ratregion
2315380D16Nkg63139165604538856045527Ratregion
2315382D16Nkg87238165891869858918938Ratregion
2315386D16Nkg17161164386540243865563Ratregion
2315388D16Nkg14189164382674743827249Ratregion
2315394D16Nkg39271165490436454904635Ratregion
2315396D16Nkg78324165765399657654320Ratregion
2315402D16Nkg40176165501075555010933Ratregion
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2315410D16Nkg22277164448871544488992Ratregion
2315412D16Nkg86352165881041458810766Ratregion
2315414D16Nkg83285165799509957995386Ratregion
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2315426D16Nkg12178164381188143812059Ratregion
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7206724D8Mit297114164659621146596325Ratregion
7205962Helt909164599170045992609Ratregion
7206380fe36g08.x10165889699258898335Ratregion
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5035849PMC23548P1380163584110835841488Ratregion
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5035530Hprt85163584108035841165Ratregion
5035629D4S3175107164607646046076567Ratregion
5031230PMC107853P1235163584124635841481Ratregion
7206170UniSTS:5323240163686569036866057Ratregion
5031378PMC153767P1198165843897258439170Ratregion
5034125RH141457183165848231558482498Ratregion
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5029273RH144171176165837663458376810Ratregion
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5506356UniSTS:478956120163291932432919444Ratregion
5506925G54093143163686417036864313Ratregion
5499969UniSTS:235869186165855840458558590Ratregion
5500440fc63g12.x1131165712364157123772Ratregion
5499971UniSTS:235866330165873243858732768Ratregion
5500358GDB:315025270164973914549739415Ratregion
5501141PMC148819P9192164566450945664701Ratregion
5501293RH16017359164730898347309342Ratregion
5501968MARC_21337-21338:1023126946:11093165566776655668859Ratregion
Position Markers

Flank 1: (D16Rat19)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21631,951,520 - 31,951,755 (+)MAPPER
Rnor_6.01635,307,110 - 35,307,342NCBI
Rnor_5.01635,126,908 - 35,127,140UniSTS
RGSC_v3.41635,339,929 - 35,340,162RGD
RGSC_v3.41635,339,930 - 35,340,162UniSTS
RGSC_v3.11635,340,004 - 35,340,237RGD
Celera1631,918,000 - 31,918,232UniSTS
FHH x ACI Map1621.0698RGD
FHH x ACI Map1621.0698UniSTS
Cytogenetic Map16p12-p11UniSTS
Peak: (D16Rat17)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21650,165,828 - 50,166,018 (+)MAPPER
Rnor_6.01653,253,168 - 53,253,355NCBI
Rnor_5.01652,968,461 - 52,968,648UniSTS
RGSC_v3.41653,486,003 - 53,486,191RGD
RGSC_v3.41653,486,004 - 53,486,191UniSTS
RGSC_v3.11653,485,861 - 53,486,309RGD
Celera1648,111,731 - 48,111,918UniSTS
RH 2.0 Map16592.6RGD
FHH x ACI Map1625.4898RGD
Flank 2: (D16Rat109)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21660,148,243 - 60,148,445 (+)MAPPER
Rnor_6.01663,909,163 - 63,909,364NCBI
Rnor_5.01663,570,510 - 63,570,711UniSTS
RGSC_v3.41663,977,586 - 63,977,788RGD
RGSC_v3.41663,977,587 - 63,977,788UniSTS
RGSC_v3.11663,977,661 - 63,977,863RGD
Celera1658,163,324 - 58,163,525UniSTS
FHH x ACI Map1635.7999RGD
FHH x ACI Map1635.7999UniSTS
Cytogenetic Map16q12.3UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2303566Bw90Body weight QTL 902body mass (VT:0001259)body weight (CMO:0000012)16139533930Rat
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
6903319Bw114Body weight QTL 1142.70.0037body mass (VT:0001259)body weight (CMO:0000012)16143534949Rat
7411664Foco30Food consumption QTL 30110.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)16144588133Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
1600378Arunc4Aerobic running capacity QTL 40.03exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)1638024580345693Rat
2293343Glom16Glomerulus QTL 167.4kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1683223646053497Rat
2312660Bw95Body weight QTL 950.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)1683223659492508Rat
2312663Slep9Serum leptin concentration QTL 90.001blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)1683223659492508Rat
2312666Insul16Insulin level QTL 160.01blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1683223659492508Rat
2312669Stl23Serum triglyceride level QTL 230.01blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)1683223659492508Rat
2306902Bp339Blood pressure QTL 3390.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16338015043025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760943025077Rat
70183BpQTLcluster13Blood pressure QTL cluster 133.654arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)16422760943025077Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
61405Niddm6Non-insulin dependent diabetes mellitus QTL 63.660.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)16422760948972724Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat
737826Alc11Alcohol consumption QTL 113.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)16422760960252231Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor depth of invasion (CMO:0001888)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat
8694453Bw172Body weight QTL 1728.330.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)162432551369325513Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)162515279370152793Rat
1298529Arunc1Aerobic running capacity QTL 14exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)163195152060148445Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)163528887080288870Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)163775215682752156Rat
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)163775215682752156Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164239634584729064Rat
631833Sach2Saccharin preference QTL 240.01consumption behavior trait (VT:0002069)calculated saccharin drink intake rate (CMO:0001613)164302484250166018Rat
8694429Bw164Body weight QTL 16450.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)165272646484729064Rat
8694364Abfw7Abdominal fat weight QTL 712.220.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)165272646484729064Rat
7411648Foco22Food consumption QTL 22150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)165272646484729064Rat
631525Pia14Pristane induced arthritis QTL 144.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)165571108783402471Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Arunc1


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Arunc1  Aerobic running capacity QTL 1  Arc1    Symbol updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cand_genes candidate genes RGD1306769, Pdlim3, Ppif detect differential expression in in the left ventricles of high aerobic capacity vs. low aerobic capacity strains; candidate genes Irs2, Acsl1 are members of biological networks containing differentially expressed genes 1547852
qtl_cross_type intercross 619535
qtl_general only male rats were used in this study 619535
qtl_general effects of this QTL are independent of other QTL affecting running capacity 619535
qtl_map QTL segment is orthologous to region on mouse chromosome 8 and human chromosomes 4q and 8p 619535
qtl_statistics_details Map Manager QTX was used for data analysis using an unconstrained regression model 619535