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Gene: Eri1 (exoribonuclease 1) Rattus norvegicus
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Symbol: Eri1
Name: exoribonuclease 1
RGD ID: 1308378
Description: Predicted to have 3'-5'-exoribonuclease activity; RNA binding activity; and ribosome binding activity. Predicted to be involved in DNA catabolic process, exonucleolytic and exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to localize to cytoplasm; histone pre-mRNA 3'end processing complex; and nucleolus. Orthologous to human ERI1 (exoribonuclease 1); PARTICIPATES IN ribosome biogenesis pathway; INTERACTS WITH bisphenol A; 1,2-dimethylhydrazine (ortholog); 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 3 ' exoribonuclease; 3' exoribonuclease; 3'-5' exoribonuclease 1; histone mRNA 3'-exonuclease 1; LOC361159; MGC108797; RGD1308378; similar to RIKEN cDNA 3110010F15; Thex1; three prime histone mRNA exonuclease 1
Orthologs:
Homo sapiens (human) : ERI1 (exoribonuclease 1)  HGNC  Alliance
Mus musculus (house mouse) : Eri1 (exoribonuclease 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Eri1 (exoribonuclease 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ERI1 (exoribonuclease 1)
Canis lupus familiaris (dog) : ERI1 (exoribonuclease 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Eri1 (exoribonuclease 1)
Sus scrofa (pig) : ERI1 (exoribonuclease 1)
Chlorocebus sabaeus (African green monkey) : ERI1 (exoribonuclease 1)
Heterocephalus glaber (naked mole-rat) : Eri1 (exoribonuclease 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01660,307,148 - 60,327,237 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1660,307,148 - 60,327,236 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01659,982,385 - 60,002,474 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41660,422,764 - 60,442,317 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11660,422,838 - 60,442,391 (+)NCBI
Celera1654,774,309 - 54,794,398 (+)NCBICelera
Cytogenetic Map16q12.2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Eri1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308378
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.