D16Rat118 Marker Search Result - Rat Genome Database

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Marker: D16Rat118

Symbol: D16Rat118
Previously known as: oxsts9737; R0316-C09; 
RGD ID: 43070
Expected Size: 223 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81644,498,650 - 44,498,873 (+)Marker Load Pipeline
mRatBN7.21637,765,608 - 37,765,831 (+)MAPPERmRatBN7.2
Rnor_6.01640,492,300 - 40,492,522NCBIRnor6.0
Rnor_5.01640,268,236 - 40,268,458UniSTSRnor5.0
RGSC_v3.41640,677,635 - 40,677,858RGDRGSC3.4
RGSC_v3.41640,677,636 - 40,677,858UniSTSRGSC3.4
RGSC_v3.11640,677,710 - 40,677,933RGD
Celera1635,887,600 - 35,887,830UniSTS
SHRSP x BN Map1612.43UniSTS
SHRSP x BN Map1612.43RGD
Cytogenetic Map16p11UniSTS
Is Marker For: Genes:   Vegfc  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CCTTGCACCTACACACATGG
Reverse Primer CCACCCTCACACACAACTGT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
619800Vegfcvascular endothelial growth factor C163771225137827845Rat
GenBank Nucleotide JH618737.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 27 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
70215Niddm29Non-insulin dependent diabetes mellitus QTL 293.54blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)161900443575226532Rat
1578768Stresp22Stress response QTL 222.8thymus mass (VT:0004954)thymus wet weight (CMO:0000855)163528887080288870Rat
2302057Pia29Pristane induced arthritis QTL 293.60.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)162173597566735975Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
6903294Stl30Serum triglyceride level QTL 302.60.0013blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)162515279370152793Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)163775215682752156Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat

1 to 10 of 27 rows


Database
Acc Id
Source(s)
NCBI Gene 114111 UniSTS