Gene: Irf2 (interferon regulatory factor 2) Rattus norvegicus
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Symbol: Irf2
Name: interferon regulatory factor 2
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN defense response to virus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription, DNA-templated (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog); nucleoplasm (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 4-amino-2,6-dinitrotoluene; acrylamide
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC290749
Orthologs:
Homo sapiens (human) : IRF2 (interferon regulatory factor 2)  HGNC  Alliance
Mus musculus (house mouse) : Irf2 (interferon regulatory factor 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Irf2 (interferon regulatory factor 2)
Pan paniscus (bonobo/pygmy chimpanzee) : IRF2 (interferon regulatory factor 2)
Canis lupus familiaris (dog) : IRF2 (interferon regulatory factor 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Irf2 (interferon regulatory factor 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01648,582,354 - 48,732,129 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01648,294,559 - 48,446,482 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41648,672,930 - 48,725,511 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11648,672,601 - 48,725,589 (-)NCBI
Celera1643,443,543 - 43,496,401 (-)NCBICelera
Cytogenetic Map16q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Irf2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1304922
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-01-08
Status: ACTIVE